ID:

dmo_821

 Coordinate:

scaffold_6482:613939-614089 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.0 -7.8 -7.6 -7.4

Flybase annnotation

exon [dmoj_GLEANR_14915:1]; CDS [Dmoj\GI14397-cds]; intron [Dmoj\GI14397-in]

Repeatable elements

NameClassFamilyStrand
Copia-1-I_DY-intLTRCopia+
Galileo_DMDNAP+
mature
star
  1. scaffold_1872:426-449 +
  2. scaffold_3967:1532-1555 +
  3. scaffold_3967:5747-5770 +
  4. scaffold_5820:1184-1207 -
  5. dmo_821  scaffold_6482:614020-614043 +
  6. scaffold_6498:366646-366669 -
  7. scaffold_6498:2148983-2149006 -
  8. scaffold_6500:30591075-30591098 +
  9. scaffold_6500:31172480-31172503 +
  10. scaffold_6500:31456630-31456653 -
  11. scaffold_6541:1289483-1289506 +
  12. scaffold_6541:1292905-1292928 +
  13. scaffold_6541:2290275-2290298 -
  14. scaffold_6680:24307240-24307263 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTTCGAGTTACATAAATGAATTTATGGGAATTCTGGATGCCCTTGGGACAGTAGGAATTGAGCTATGCGACGAATTGCGCAGTATTATTTTGCTGTCGAGTCTTCCAGAAAGTTTCCCAGCTCTTTCGTTTTGAGTGAAGAGTATACCGAAATCTTAAAATCATTTGCGACATTCATGCAAACAAAATGTTAGCGTTATGATATATATTTATGGGAAGGGTATGAATGCGTTGTGGCGCATAAAGATTATG
***********************************************************************************************************************************.....................((...........(((((((((...........)))))).)))....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
.......................................................................................................................................................................................................................AAGGGTATGAATGCGTTGTGGCGC............ 24 0 1 12.00 12 5 6 0 1 0
...................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTTGTGGC.............. 26 0 1 2.00 2 1 1 0 0 0
.................................................................................................................................................................................................................TATGGGAAGGGTATGAATGCGTTGTGG............... 27 0 1 2.00 2 1 1 0 0 0
...................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTTGTGG............... 25 0 1 2.00 2 1 1 0 0 0
................................................................................................................................................................................TGCAAACAAAATGTTAGCGTTATGA.................................................. 25 0 1 2.00 2 2 0 0 0 0
...................................................................................................................................TGAGTGAAGAGTATACCGAAATCT................................................................................................ 24 0 14 1.93 27 12 3 11 1 0
...................................................................................................................................TGAGTGAAGAGTATACCGAAATCTT............................................................................................... 25 0 14 1.64 23 8 4 9 2 0
.......................................................................................................................................................................................................................AAGGGTATGAATGCGTTGTGGC.............. 22 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................GGGAAGGGTATGAATGCGTTGTGG............... 24 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................AAGGGTATGAATGCGTTGTGGCGCA........... 25 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................TTGGAAGGGTATGAATGCGTTGTGGC.............. 26 1 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................GCAAACAAAATGTTAGCGTTATG................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTTGTGGCG............. 27 0 1 1.00 1 1 0 0 0 0
..TCGAGTTACATAAATGAATTTATGGGA.............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................TGCAAACAAAATGTTAGCGTTATGAT................................................. 26 0 1 1.00 1 0 0 1 0 0
........................................................................................................................................................................................................................AGGGTATGAATGCGTTGTGGCGCA........... 24 0 1 1.00 1 0 0 0 1 0
..............................................................................................GTCGAGTCTTCCAGAAAGTTTCCCAGC.................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................TGCAAACAAAATGTTAGCGTTATG................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................AGGGTATGAATGCGTTGTGGCGC............ 23 0 1 1.00 1 1 0 0 0 0
....................TTTATGGGAATTCTGGATGCC.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................TGGGAAGGCTATGAATGCGTTGTGG............... 25 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TGGGAAGGGTCTGAATGCGTTGTGG............... 25 1 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................AGGGTATGAATGCGTTGTGGC.............. 21 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................TGAGTGAAGAGTATACCGAAATCTTA.............................................................................................. 26 0 14 1.00 14 6 1 5 2 0
.............................................................................................................................................GTATACCGAAATCTTAAAATCATTTGC................................................................................... 27 0 3 0.67 2 1 1 0 0 0
.......................................................AATTGAGCTATGCGACGAATTGCGC........................................................................................................................................................................... 25 0 12 0.50 6 4 2 0 0 0
..........................................................................................................................................................................................................................GGTATGAATGCGTTATGGCGC............ 21 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................CGTTTTGAGTGAAGAGTATACCG...................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
...............................................ACAGTAGGAATTGAGCTATGCGACG................................................................................................................................................................................... 25 0 11 0.45 5 4 1 0 0 0
.......................................................AATTGAGCTATGCGACGAATTGCG............................................................................................................................................................................ 24 0 12 0.42 5 3 0 2 0 0
............................................................................................................................................AGTATACCGAAATCTTAAAATCATT...................................................................................... 25 0 3 0.33 1 1 0 0 0 0
.............................................................................................................................................GTATACCGAAATCTTAAAATCATT...................................................................................... 24 0 3 0.33 1 1 0 0 0 0
...................................................TAGGAATTGAGCTATGCGACGAAT................................................................................................................................................................................ 24 0 12 0.33 4 1 0 3 0 0
............................................................................................................................................ATTATACCGAAATCTTAAAATCATT...................................................................................... 25 1 3 0.33 1 0 1 0 0 0
.......................................................AATTGAGCTATGCGACGAATTGCGCAG......................................................................................................................................................................... 27 0 12 0.33 4 1 0 3 0 0
............................................................................................................................................AGTATACCGAAATCTTAAAATCATTTGC................................................................................... 28 0 3 0.33 1 0 1 0 0 0
............................................................................................................................................AGCATACCGAAATCTTAAAATCATT...................................................................................... 25 1 3 0.33 1 0 1 0 0 0
.............................................................................................................................................GTATACCGAAATCTTAAAATCATTT..................................................................................... 25 0 3 0.33 1 1 0 0 0 0
.............................................................................................................................................GGATACCGAAATCTTAAAATCATT...................................................................................... 24 1 3 0.33 1 0 1 0 0 0
TTTCGAGTTACATAAATGAATC..................................................................................................................................................................................................................................... 22 1 4 0.25 1 0 1 0 0 0
...................................................................................................................................TGAGTGAAGAGTATACCGAAATC................................................................................................. 23 0 17 0.24 4 3 1 0 0 0
...................................................................................................................................TGAGTGAAGAGTATACCGAAATCTTAA............................................................................................. 27 0 14 0.21 3 2 0 1 0 0
...............................................................................................................................................................................................................TTTATGGGAAGGGTATGAATGCGTTG.................. 26 0 20 0.20 4 4 0 0 0 0
...............................................ACAGTAGGAATTGAGCTATGCGACGA.................................................................................................................................................................................. 26 0 11 0.18 2 1 0 1 0 0
...............................................ACAGTAGGAATTGAGCTATGCGA..................................................................................................................................................................................... 23 0 11 0.18 2 2 0 0 0 0
........................................................ATTGAGCTATGCGACGAATTGCGC........................................................................................................................................................................... 24 0 12 0.17 2 1 1 0 0 0
...................................................TAGGAATTGAGCTATGCGACGAATTG.............................................................................................................................................................................. 26 0 12 0.17 2 2 0 0 0 0
.......................................................AATTGAGCTATGCGACGAATTGCGCA.......................................................................................................................................................................... 26 0 12 0.17 2 2 0 0 0 0
..................................................................................TATTATTTTGCTGTCGAGTCTTCCAG............................................................................................................................................... 26 0 12 0.17 2 1 0 1 0 0
.........................................................TTGAGCTATGCGACGAATTGCGC........................................................................................................................................................................... 23 0 13 0.15 2 1 0 0 1 0
.................................................................................................................................TTTGAGTGAAGAGTATACCGAAATCT................................................................................................ 26 0 13 0.15 2 1 1 0 0 0
.................................................................................................................................TTTGAGTGAAGAGTATACCGAAATCTT............................................................................................... 27 0 13 0.15 2 1 0 1 0 0
..........................................................TGAGCTATGCGACGAATTGCGCAGT........................................................................................................................................................................ 25 0 13 0.15 2 0 0 2 0 0
...................................................................................................................................TGAGTGAAGAGTATACCGAAATCTTAAA............................................................................................ 28 0 14 0.14 2 0 0 2 0 0
...................................................................................................................................TTAGTGAAGAGTATACCGAAATCT................................................................................................ 24 1 16 0.13 2 0 2 0 0 0
...............................................................................................................................................................................................................TTTATGGGAAGGGTATGAATGCG..................... 23 0 20 0.10 2 1 1 0 0 0
...................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTTG.................. 22 0 20 0.10 2 2 0 0 0 0
.................................................................................................................................................................................................................TATGGGAAGGGTATGAATGCGTTG.................. 24 0 20 0.10 2 2 0 0 0 0
...............................................ACAGTAGGAATTGAGCTATGCGAC.................................................................................................................................................................................... 24 0 11 0.09 1 1 0 0 0 0
..............................................GACAGTAGGAATTGAGCTATGCGA..................................................................................................................................................................................... 24 0 11 0.09 1 0 0 1 0 0
..............................................GACAGTAGGAATTGAGCTATGCGAC.................................................................................................................................................................................... 25 0 11 0.09 1 0 0 1 0 0
...............................................ACAGTATGAATTGAGCTATGCGAC.................................................................................................................................................................................... 24 1 11 0.09 1 0 1 0 0 0
...............................................ACAGTAGGAATTGAGCTATGCG...................................................................................................................................................................................... 22 0 11 0.09 1 0 1 0 0 0
..............................TTCTGGATGCCCTTGGGACAG........................................................................................................................................................................................................ 21 0 12 0.08 1 1 0 0 0 0
......................................................GAATTGAGCTATGCGACGAATTGCGC........................................................................................................................................................................... 26 0 12 0.08 1 1 0 0 0 0
...................................................TAGGAATTGAGCTATGCGACGAATTGCG............................................................................................................................................................................ 28 0 12 0.08 1 1 0 0 0 0
.......................................................AATTGAGCTATGCGACGAATTTCG............................................................................................................................................................................ 24 1 12 0.08 1 0 0 0 1 0
........................................................ATTGAGCTATGCGACGAATTGCGTAT......................................................................................................................................................................... 26 2 12 0.08 1 1 0 0 0 0
.......................................................AATTGAGCTATGCGACGAATTGC............................................................................................................................................................................. 23 0 12 0.08 1 1 0 0 0 0
......................................................GAATTGAGCTATGCGACGAATTGCG............................................................................................................................................................................ 25 0 12 0.08 1 0 0 1 0 0
...................................................TAGGAATTGAGCTATGCGACGA.................................................................................................................................................................................. 22 0 12 0.08 1 1 0 0 0 0
.......................................................AATTGAGCTATGCGACGCATTGCGCAG......................................................................................................................................................................... 27 1 12 0.08 1 0 0 0 1 0
..................................................................................TATTATTTTGCTGTCGAGTCTTCCA................................................................................................................................................ 25 0 12 0.08 1 0 0 1 0 0
..............................................GACAGTAGGAATTGAGCTA.......................................................................................................................................................................................... 19 0 12 0.08 1 0 0 1 0 0
...................................................TAGGAATTGAGCTATGCGACGAATTGCGC........................................................................................................................................................................... 29 0 12 0.08 1 0 1 0 0 0
.......................................................AATTGAGCTATGCGACGAATTGCGCAGT........................................................................................................................................................................ 28 0 12 0.08 1 0 0 1 0 0
.........................................................TTGAGCTATGCGACGAATTGCGCAG......................................................................................................................................................................... 25 0 13 0.08 1 0 0 1 0 0
.........................................................TTGAGCTATGCGACGAATTGCGCA.......................................................................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0
....................................................................................................................................GAGTGAAGAGTATACCGAAATCTTA.............................................................................................. 25 0 14 0.07 1 1 0 0 0 0
.................................................................................................................................TTTGAGTGAAGAGTATACCGAAATC................................................................................................. 25 0 14 0.07 1 0 1 0 0 0
..................................................................................................................................TTGAGTGAAGAGTATACCGAAATCT................................................................................................ 25 0 14 0.07 1 1 0 0 0 0
................................................................................................................................TTTTGAGTGAAGAGTATACCGAAATC................................................................................................. 26 0 14 0.07 1 1 0 0 0 0
..................................................................................................................................GTGAGTGAAGAGTATACCGAAATCTT............................................................................................... 26 1 15 0.07 1 1 0 0 0 0
...................................................................................................................................TGAGTGAAGAGTATACCGAAATATT............................................................................................... 25 1 16 0.06 1 0 0 0 1 0
...................................................................................................................................TTAGTGAAGAGTATACCGAAATCTTAAAA........................................................................................... 29 1 16 0.06 1 0 1 0 0 0
.......................................................................................................................................TGAAGAGTATACCGAAATCT................................................................................................ 20 0 16 0.06 1 0 0 1 0 0
.................................................................................................................................TTTGAGTGAAGAGTATACCGAAA................................................................................................... 23 0 16 0.06 1 1 0 0 0 0
..............................TTCGGGATGCCCTTTGGA........................................................................................................................................................................................................... 18 2 18 0.06 1 1 0 0 0 0
.................................................................................................................................TTTGAGTGAAGAGTATACCG...................................................................................................... 20 0 19 0.05 1 1 0 0 0 0
....................................................................................................................................................................TTGCGACATTCATGCAAACAAAATGTTAG.......................................................... 29 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................................AAGGGTATGAATGCGTT................... 17 0 20 0.05 1 0 0 0 0 1
.......................................................................................................................................................................................................GATATATATTTATGGGAAGGGT.............................. 22 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................TTTATGGGAAGGGTATGAATG....................... 21 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................ATGGGAAGGGTATGAATGCGTT................... 22 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................TCATTCATGCAAACAAAATGTTAGC......................................................... 25 1 20 0.05 1 1 0 0 0 0
..................................................................................................................................TTGAGTGAAGAGTGTGCCGA..................................................................................................... 20 2 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................TTTATGGGAAGGGTATGAATGCGTT................... 25 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................TTTATGGGAAGGGTATGAATGC...................... 22 0 20 0.05 1 0 0 0 1 0
...........................................................................................................................................................................................................TATATTTATGGGAAGGGTATG........................... 21 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................ATTTATGGGAAGGGTATGAATG....................... 22 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................ATTCATGCAAACAAAATGTTAGCG........................................................ 24 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTT................... 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................TTTATGGGAAGGGAATGAATGCGTTG.................. 26 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................AGATTTATGGGAAGGGTATGAATGCGT.................... 27 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................CATTCATGCAAACAAAATGTTAGCGT....................................................... 26 0 20 0.05 1 0 0 1 0 0
...................................................................................................................................................................................................................TGGGAAGGGTATGAATGC...................... 18 0 20 0.05 1 0 0 0 1 0
............................................................................................................................................................................TTCATGCAAACAAAATGTTAGCGTT...................................................... 25 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................TATGGGAAGGGAATGAATGCGTTG.................. 24 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................TTAGTGAAGAGTATACCG...................................................................................................... 18 1 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................TTTGCGACATTCATGCAAACAAAATGTT............................................................ 28 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

AAAGCTCAATGTATTTACTTAAATACCCTTAAGACCTACGGGAACCCTGTCATCCTTAACTCGATACGCTGCTTAACGCGTCATAATAAAACGACAGCTCAGAAGGTCTTTCAAAGGGTCGAGAAAGCAAAACTCACTTCTCATATGGCTTTAGAATTTTAGTAAACGCTGTAAGTACGTTTGTTTTACAATCGCAATACTATATATAAATACCCTTCCCATACTTACGCAACACCGCGTATTTCTAATAC
**************************************************.....................((...........(((((((((...........)))))).)))....))*********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
..............................AAGACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 27 0 11 6.36 70 27 42 1 0 0
...............................................................................................................CAAAGGGTCGAGAAAGCAAAACTCACTT................................................................................................................ 28 0 1 4.00 4 2 2 0 0 0
................................................................................................................AAAGGGTCGAGAAAGCAAAACTCACT................................................................................................................. 26 0 1 3.00 3 1 2 0 0 0
.............................................................................................................................AGCAAAACTCACTTCTCATATGGCTT.................................................................................................... 26 0 2 3.00 6 6 0 0 0 0
...............................AGACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 26 0 11 2.55 28 15 11 0 2 0
................................GACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 25 0 11 2.36 26 25 0 1 0 0
.............................TAAGACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 28 0 11 2.00 22 11 11 0 0 0
.............................................................................................................................AGCAAAACTCACTTCTCATATGGCT..................................................................................................... 25 0 2 2.00 4 3 1 0 0 0
...............................................................................................................CAAAGGGTCGAGAAAGCAAAACTCACT................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0
......................................................................................................................................................................................................ACTATATATAAATACCCTTCCCATACT.......................... 27 0 1 2.00 2 2 0 0 0 0
............................................................................................................................AAGCAAAACTCACTTCTCATATGGCT..................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
...........................................................................................................................AAAGCAAAACTCACTTCTCATATGGCT..................................................................................................... 27 0 2 1.50 3 2 1 0 0 0
.................................................................................................................................................................GTAAACGCTGTAAGTACGTTTGTTT................................................................. 25 0 2 1.50 3 2 1 0 0 0
...................................................................................................................GGGTCGAGAAAGCAAAACTCACTTCT.............................................................................................................. 26 0 3 1.33 4 4 0 0 0 0
.................................ACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 24 0 12 1.17 14 10 3 1 0 0
..............................AAGACCTACGGGAACCCTGTCATCCGT.................................................................................................................................................................................................. 27 1 11 1.09 12 0 12 0 0 0
..........................................................................................................................GAAAGCAAAACTCACTTCTCATATGGC...................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
.........................................................................................................................................................GAATTTTAGTAAACGCTGTAAGTACGT....................................................................... 27 0 2 1.00 2 2 0 0 0 0
................................................................................................................AAAGGGTCGAGAAAGCAAAAC...................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
...........................................................................................................CTTTCAAAGGGTCGAGAAAGCAAAAC...................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................TACGCAACACCGCGTATTTCTAATAC 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................GCAAAACTCACTTCTCATATGGCTT.................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
............................................................................................................TTTCAAAGGGTCGAGAAAGCAAA........................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
..........GTATTTACTTAAATACCCTTAAGACCT...................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................ATACTATATATAAATACCCTTCCCATACT.......................... 29 0 1 1.00 1 0 1 0 0 0
...............................................................................................................CAAAGGGTCGAGAAAGCAAAACTCACGT................................................................................................................ 28 1 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................ACTTACGCAACACCGCGTATTTCTA.... 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................TTCAAAGGGTCGAGAAAGCAAAACTCACT................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................ATACTTACGCAACACCGCGTATTTCTA.... 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................TTACAATCGCAATACTATATATAAATACC..................................... 29 0 1 1.00 1 0 1 0 0 0
..............................................................................................................ACAAAGGGTCGAGAAAGCAAAACTCACT................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0
............................................................................................................................AAGCAAAACTCACTTCTCATATGGCTT.................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
.............................................................................................ACAGCTCAGAAGGTCTTTCAAAGGGT.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................CGACAGCTCAGAAGGTCTTTCAAAGGGT.................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
.................................................................................................................AAGGGTCGAGAAAGCAAAACTCACT................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
..............................................................................................................TCAAAGGGTCGAGAAAGCAAAACTCACT................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................................................ACGCAACACCGCGTATTTCTA.... 21 0 1 1.00 1 1 0 0 0 0
..................................CCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 23 0 12 0.92 11 9 2 0 0 0
..............................AAGACCTACGGGAACCCTGTCATCCT................................................................................................................................................................................................... 26 0 12 0.67 8 4 4 0 0 0
......................................................................................................................TCGAGAAAGCAAAACTCACTTCT.............................................................................................................. 23 0 3 0.67 2 0 2 0 0 0
...............................AGACCTACGGGAACCCTGTCATCCT................................................................................................................................................................................................... 25 0 12 0.58 7 7 0 0 0 0
...........................................................................................................................AAAGCAAAACTCACTTCTCATATGGCTT.................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................TTAGAATTTTAGTAAACGCTGTAAGT........................................................................... 26 0 2 0.50 1 0 1 0 0 0
...............................................................................................................................CAAAACTCACTTCTCATATGGCTT.................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................TAGAATTTTAGTAAACGCTGTAAGTACGT....................................................................... 29 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................AGCAAAACTCACTTCTCATATGGCTTT................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................GCAAAACTCACTTCTCATATGGCT..................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................GAAAGCAAAACTCACTTCTCATATGGCT..................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................AGAATTTTAGTAAACGCTGTAAGTACGT....................................................................... 28 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................GAAAGCAAAACTCACTTCTCATATGGCTT.................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
..................................................................................................................AGGGTCGAGAAAGCAAAACTCACTT................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0
..................................CCTACGGGAACCCTGTCATCCTTAACT.............................................................................................................................................................................................. 27 0 12 0.33 4 2 2 0 0 0
.....................................................................................................................GTCGAGAAAGCAAAACTCACT................................................................................................................. 21 0 3 0.33 1 0 0 0 1 0
..................................................................................................................AGGGTCGAGAAAGCAAAACTCACT................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0
..................................................................................................................AGGGTCGAGAAAGCAAAACTCACTTCT.............................................................................................................. 27 0 3 0.33 1 1 0 0 0 0
.....................................ACGGGAACCCTGTCATCCTTAACT.............................................................................................................................................................................................. 24 0 12 0.33 4 4 0 0 0 0
......................................CGGGAACCCTGTCATCCTTAACT.............................................................................................................................................................................................. 23 0 12 0.33 4 4 0 0 0 0
......................................CGGGAACCCTGTCATCCTTAACTCGA........................................................................................................................................................................................... 26 0 12 0.33 4 1 3 0 0 0
.....................................................................................................................GTCGAGAAAGCAAAACTCACTTCT.............................................................................................................. 24 0 3 0.33 1 1 0 0 0 0
...................................................................................................................GGGTCGAGAAAGCAAAACTCACGT................................................................................................................ 24 1 3 0.33 1 0 1 0 0 0
....................................................................................................................GGTCGAGAAAGCAAAACTCACTTCT.............................................................................................................. 25 0 3 0.33 1 1 0 0 0 0
...................................................................................................................GGGTCGAGAAAGCAAAACTCACTT................................................................................................................ 24 0 3 0.33 1 0 1 0 0 0
.................................................................................................................................................TGGCGTTAGAAGTTTAGTAA...................................................................................... 20 2 6 0.33 2 0 0 2 0 0
..................................................................................................................AGGGTCGAGAAAGCAAAACTCAC.................................................................................................................. 23 0 3 0.33 1 0 1 0 0 0
......................................................................................................................TCGAGAAAGCAAAACTCACGTCT.............................................................................................................. 23 1 3 0.33 1 0 1 0 0 0
...............................CGACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 26 1 11 0.27 3 2 0 1 0 0
.....................................ACGGGAACCCTGTCATCCTTAACTCGA........................................................................................................................................................................................... 27 0 12 0.25 3 3 0 0 0 0
.............................TAAGACCTACGGGAACCCTGTCATCCT................................................................................................................................................................................................... 27 0 12 0.25 3 3 0 0 0 0
...................................CTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 22 0 12 0.25 3 0 3 0 0 0
............................TTAAGACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 29 0 11 0.18 2 2 0 0 0 0
.............................CAAGACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 28 1 11 0.18 2 0 2 0 0 0
.............................TAAGACCTACGGGAACCCTGTCATCCGT.................................................................................................................................................................................................. 28 1 11 0.18 2 0 2 0 0 0
...................................CTACGGGAACCCTGTCATCCTTAACT.............................................................................................................................................................................................. 26 0 12 0.17 2 1 0 1 0 0
......................................CGGGAACCCTGTCATCCTTAACTAGA........................................................................................................................................................................................... 26 1 12 0.17 2 0 2 0 0 0
......................................CGGGAACCCTGTCATCCTTAACTCGAT.......................................................................................................................................................................................... 27 0 12 0.17 2 1 1 0 0 0
...................................CTACGGGAACCCTGTCATCATT.................................................................................................................................................................................................. 22 1 12 0.17 2 0 2 0 0 0
............................................................................CGCGTCATAATAAAACGACAGCTCAGAA................................................................................................................................................... 28 0 13 0.15 2 1 1 0 0 0
...............................................................................................................................................TCTGGCGTTAGAAGTTTAGTAA...................................................................................... 22 3 8 0.13 1 1 0 0 0 0
......................................................................................................................................................................CGCTGTAAGTACGTTTGTTTT................................................................ 21 0 20 0.10 2 0 0 1 0 1
...............................AGACCCACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 26 1 11 0.09 1 1 0 0 0 0
.............................TAAGACATACGGGAACCCTGTCATCCGT.................................................................................................................................................................................................. 28 2 11 0.09 1 0 1 0 0 0
................................AACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 25 1 11 0.09 1 1 0 0 0 0
...............................CCACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 26 2 11 0.09 1 1 0 0 0 0
...............................AGACCTACGGGAACCCTGTCATCCCT.................................................................................................................................................................................................. 26 1 11 0.09 1 0 0 0 1 0
...............................AGACCTACGGGAACCCTGTCATCCGT.................................................................................................................................................................................................. 26 1 11 0.09 1 0 1 0 0 0
..............................AATACCTACGGGAACCCTGTCATCCGT.................................................................................................................................................................................................. 27 2 11 0.09 1 0 1 0 0 0
...............................TGACCTACGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 26 1 11 0.09 1 0 1 0 0 0
.............................TAAGACCTACGGGCACACTGTCATCCTT.................................................................................................................................................................................................. 28 2 11 0.09 1 0 1 0 0 0
.............................................CCTGTCATCCTTAACTCGATAC........................................................................................................................................................................................ 22 0 11 0.09 1 0 1 0 0 0
................................GACCTACGGGAACCCTGTCATCCTTT................................................................................................................................................................................................. 26 1 11 0.09 1 1 0 0 0 0
..............................AATACCTACGGGCACCCTGTCATCCTT.................................................................................................................................................................................................. 27 2 11 0.09 1 0 1 0 0 0
..............................AAGACCTACGGGAACCCTGTCGTCCTT.................................................................................................................................................................................................. 27 1 11 0.09 1 0 1 0 0 0
..............................AAGACCTACGGGAACCCTGTCATCATT.................................................................................................................................................................................................. 27 1 11 0.09 1 0 1 0 0 0
..............................AAGACCTACAGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 27 1 11 0.09 1 0 1 0 0 0
................................GACCTACGGGAACCCTGTCATCCTTAACT.............................................................................................................................................................................................. 29 0 11 0.09 1 1 0 0 0 0
..................................CCTACGGGAACCCTGTCATCCTTA................................................................................................................................................................................................. 24 0 12 0.08 1 0 1 0 0 0
..................................................................................TTAATAAAACGACAGCTCAGAAGGTCTTT............................................................................................................................................ 29 1 12 0.08 1 0 0 1 0 0
......................................CGGGAACCCTGTCATCCTT.................................................................................................................................................................................................. 19 0 12 0.08 1 1 0 0 0 0
..............................AAGACCTACGGGAACCCTGTCATCC.................................................................................................................................................................................................... 25 0 12 0.08 1 0 1 0 0 0
.....................................................................................ATAAAACGACAGCTCAGAAGGTCTT............................................................................................................................................. 25 0 12 0.08 1 1 0 0 0 0
..................................CCTACGGGAACCCTGTCATCCTTAAC............................................................................................................................................................................................... 26 0 12 0.08 1 1 0 0 0 0
...................................CTACGGGAACCCTGTCATCCGT.................................................................................................................................................................................................. 22 1 12 0.08 1 0 1 0 0 0
......................................CGGGAACCCTGTCATCCTTAACTCTA........................................................................................................................................................................................... 26 1 12 0.08 1 0 1 0 0 0
........................................GGAACCCTGTCATCCTTAACTCGAT.......................................................................................................................................................................................... 25 0 12 0.08 1 1 0 0 0 0
.......................................GGGAACCCTGTCATCCTTAACTCGAT.......................................................................................................................................................................................... 26 0 12 0.08 1 1 0 0 0 0
..................................CCTACGGGAACCCTGTCATCCGT.................................................................................................................................................................................................. 23 1 12 0.08 1 0 1 0 0 0
....................................................................................AATAAAACGACAGCTCAGAAGGTCTTT............................................................................................................................................ 27 0 12 0.08 1 1 0 0 0 0
.....................................TCGGGAACCCTGTCATCCTTAACTCGAT.......................................................................................................................................................................................... 28 1 12 0.08 1 1 0 0 0 0
.....................................ACGGGAACCCTGTCATCCTTAAC............................................................................................................................................................................................... 23 0 12 0.08 1 1 0 0 0 0
..............................AAGACCTACGGGAACCCTGT......................................................................................................................................................................................................... 20 0 12 0.08 1 0 1 0 0 0
..................................CCTACGGGAACCCTGTCATCCTTC................................................................................................................................................................................................. 24 1 12 0.08 1 0 1 0 0 0
........................................GGAACCCTGTCATCCTTAACTCGA........................................................................................................................................................................................... 24 0 12 0.08 1 1 0 0 0 0
.................................................................................CATAATAAAACGACAGCTCAGAAGGTCTT............................................................................................................................................. 29 0 12 0.08 1 0 0 1 0 0
................................GACCTACGGGAACCCTGTCATCCT................................................................................................................................................................................................... 24 0 12 0.08 1 0 0 1 0 0
.....................................ACGGGAACCCTGTCATCCTTA................................................................................................................................................................................................. 21 0 12 0.08 1 1 0 0 0 0
.............................AAAGACCTACGGGAACCCTGTCATC..................................................................................................................................................................................................... 25 1 12 0.08 1 1 0 0 0 0
..............................AAGACCTACGGGAACCCTGTCA....................................................................................................................................................................................................... 22 0 12 0.08 1 0 1 0 0 0
....................................AACGGGAACCCTGTCATCCTTAACTCGAT.......................................................................................................................................................................................... 29 1 12 0.08 1 1 0 0 0 0
.................................ACCTACGGGAACCCTGTCATC..................................................................................................................................................................................................... 21 0 13 0.08 1 0 1 0 0 0
.................................ACCTACGGGAACCCTGTCATCCT................................................................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0 0
..............................................................................CGTCATAATAAAACGACAGCTCAGAA................................................................................................................................................... 26 0 13 0.08 1 0 1 0 0 0
.......................................................................................AAAACGACAGCTCAGAAGGTCTTT............................................................................................................................................ 24 0 13 0.08 1 0 0 1 0 0
...........................................................................ACGCGTCATAATAAAACGACAGCTCAGAA................................................................................................................................................... 29 0 13 0.08 1 1 0 0 0 0
.................................................................................................................................AAACTCACTTCTCATATGGCTTTAGAATT............................................................................................. 29 0 13 0.08 1 1 0 0 0 0
..................................CCTACGGGAACCCTGTCAT...................................................................................................................................................................................................... 19 0 13 0.08 1 0 1 0 0 0
..............................................................................................CACCTCAGAAGGTCAATCAAA........................................................................................................................................ 21 3 14 0.07 1 0 0 0 1 0
....................................................................................................................................CTCACTTCTCATATGGCTTTAGAAT.............................................................................................. 25 0 14 0.07 1 0 1 0 0 0
..................................................................................................................................AACTCACTTCTCATATGGCTTTAGAATT............................................................................................. 28 0 14 0.07 1 1 0 0 0 0
..................................................................CGCTGCTTAACGCGTCATAAT.................................................................................................................................................................... 21 0 15 0.07 1 0 0 1 0 0
......................................................................................................................................CACTTCTCATATGGCTTTAGAATTT............................................................................................ 25 0 16 0.06 1 0 1 0 0 0
.....................................................................................................................................CCACTTCTCATATGGCTTTAGAATTT............................................................................................ 26 1 16 0.06 1 0 1 0 0 0
......................................CGGTATCCCTGTCACCCTTA................................................................................................................................................................................................. 20 3 18 0.06 1 1 0 0 0 0
.......................................................................................................................................................................................................CTATATATAAATACCCTTCCCATACT.......................... 26 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................CGCTGTAAGTACGTTTGTTTTACAAT........................................................... 26 0 20 0.05 1 1 0 0 0 0
..................................................................................................TTAGAAGGTCTTTCAACCG...................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0
........................................................................................................................................................................CTGTAAGTACGTTTGTTT................................................................. 18 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................CGCTGTGAGTACGTTTGTTTT................................................................ 21 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:613889-614139 + dmo_821 TTTCGAGTTACATAAATGAATTTATGGGAATTCTGGATGCCCTTGGGACAGTAGGAATTGAGC----TATGCGACGAATTGCGCAGTATTATTTTGCTGTCGAGTCT--TCCAGAAAGTTTCCC-AGC-TCTTTCGTTTTGAGTGAAGAGTATACCGAAATCTTA-----------AAATCATTTGCGACATTCATGCAAACAAAATGTTAGCGTTATGATATATATTTATGGGAAGGGTATGAATGCGTTGTGGCGCATAAAGATTATG
droVir3 scaffold_12936:70413-70435 - TGCAAAACTATATGAATGAGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_9023:3557-3662 + TGGCTAGCTATTTGATCACATTTATTGAAATCGTGGATCAGCTTGCCGGAGTTGGAATAGCAA----TAGTTGACGAGCT---CAAGGTCATTTTGCTTTCCAGTCT--TCCAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004968:664763-664920 - TATCGAGTTTTTTGTCGGATTTCAAGGAAGTCTTGGACAAACTTGCTGGTGTCGGAATCGAAA----TATTGGACGCGCTTATAACGATTATTTTGCTTTCCAGTCT--TCCAGACGAATTCGACAAT-TTCGTTGTTGCCATAGAGACGCGTTTCGACATTTTA---------------------------------------------------------------------------------------------------------
dp5 Unknown_group_126:18731-18846 - TTTCAAGCTACATTAATGAGTTCATGGATATTCTTGATGGCCTTGGGTCAGTAGGAATCGAGC----TAAATGATGAACTGCGCTCAATTGTTTTGTTGTCAAGCCT--TCCAGAACAATTC----------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_297:11410-11536 + TTTCAAGCTACATTAATGAGTTCGTGGATATTCTT---GGCCTAGGGTCAGTAGGAATCGAGC----TAAATGATGAGCTGCGCTCAATTGTTTTGTTGTCAAGCCT--TCCAGAACAATTCGAAAAT-TTCGTTTT-------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13417:3519751-3519915 - TGGCTGAATATGTAAACTCATTTGTTGAAATCACAGACAAATTGGCCGAATTAGATATTAATA----TCAATGACGTGTTGAAAGTTATAATGATGTTGACTAGTTT--GCCAAATAATTTTGAAAAC-TTTGTTGTGGCAATCGAAACACGTG---AAAAATTACCATCATTTG-----------------------------------------------------------------------------------------------
droBip1 scf7180000393980:64945-65053 - TGACGACCTACATAAGTGAATTTGTGGAAATTCTGGATTGTCTAACTGGAGTTGGAATAGAGA----TAAACGACGAACTTCGCACTATCGTTTTGCTATCAAGTCT--TCCAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302050:1803-1973 + TGACCAGTTACATCAATATGTTTGTCGAAATTTTGGATCAGCTTGCAAGTGTTGGAATCGATT----TAAATGAAGAGCTAAGAGCAATCATTCTACTCTCCAGCCT--TCCAAAAGATTCCGAAAGC-TTTGTTGTTGCTATTGAAACGCGTG---ACAATTTACCGGCATTCGAGAATC-----------------------------------------------------------------------------------------
droFic1 scf7180000448921:4979-5094 + TGGTGACTTACATAAGTGAGTTCGTGGAAATTCTGGATGGTTTAGCTGGAATAGGCATAGAGC----TAAACGATGAACTTCGCACTATCGTTTTGCTGTCGAGCCT--TCCAGAACAGTTC----------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000487365:7976-8137 - TGACCGGCTACATAAGTGTGTTTATCGAAATCTTAGATCAACTTGCAAGTGTGAATATCGATC----TAAATGAAGAGCTGAGAGCAGTCATTTTACTTTCCAGTCA--TCCAAAAGACTATGAAGGT-TTTGTTGTTTC---------GCGTG---ACGATTTACCGGCGTTTGAAAATC-----------------------------------------------------------------------------------------
droRho1 scf7180000763891:2128-2243 + TGTCTACCTATATAAGCGAATTTGCAGAAATTCTGGATGGCCTAGCTGGAGTTGGAATAGAGC----TAAACGATGAACTACGAACTATCGTTTTGCTGTCGAGTCT--TCCAGAGCAGTTT----------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301310:5344-5458 - TATCCAGTTATATTCATGAATTCCTGGAAGTTCTGGATGGTCTAATTTCAGTTGGAATAATCC----TAAAGGAGGAGCTAGGCACAGTTGTTTTACTCTCGAGTCT--TTCAGAACATTT-----------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413596:17236-17351 + TATCCAGCTATATTAACGAATTCCTGGATATTTTGGATGGTCTAACCTCAGTTGGAATCGATC----TAAACGAGGAGCTACGCAGAATTGTTCTACTGTCGAGCCT--TCCAGAACAATTC----------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000407572:12129-12238 + TGACGACCTACATAAGTGAATTTTTGGAAATTCTGGATGGTCTAACCGGAGTTGGAATAGAGC----TAAACGATGAACTACGCACTATCGTTTTGCTATCGAGCCT--TCCAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrUextra:11024349-11024464 - TATCGTCACATATTAAAGAATTTAAGGAAATCTTTGATGCCCTTGATGCAGTGGAAATTGGTA----TCACCGAGAAATTGCGCAGTGTTGTTTTGCTGTCGAGCCT--TCCAGAGAGTTTC----------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 node_47917:1-115 - TATCGTCACATATTAAAGAATTTAAGGAAATCTTTGATGCCCTTGATGCGGTGGAAATTGGTA----TCACCGAGAAATTGCGCAGTGTTGTTTTGCTGTCGAGCCT--TCCAGAGAGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_14335:22-152 - TATCGTCACATATTAAAGAATTTAAGGAAATCTTTGATGCCCTTGATGCGGTGGAAATTGGTA----TCACCGAGAAATTGCGCAGTGTTGTATTGCTGTTCGACCCTATCCAGAGAGTTTCGAGATATTCCGTT---------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_428:65520-65635 - TGTCGACATACATAAGCGAGTTTGTGGAAATTCTGGATGGTCTAGCTGGAGTTGGAATAGAGC----TAAACGATGAGTTACGAACTATCGTTTTGCTGTCGAGTCT--TCCAGAACAATTC----------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:2949655-2949783 - CTTCCAGTCACCTGAATGCTTTCAGTGAGTTTTTGGATCAACTATCGTCGGTGGCAATTGACATATGTAAGTGAGGAGCTTCAATCCATAATCCTGCTATCGAGTCT--TCCCAAGGACTACTAAATT-TTT------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTTCGAGTTACATAAATGAATTTATGGGAATTCTGGATGCCCTTGGGACAGTAGGAATTGAGC----TATGCGACGAATTGCGCAGTATTATTTTGCTGTCGAGTCT--TCCAGAAAGTTTCCC-AGC-TCTTTCGTTTTGAGTGAAGAGTATACCGAAATCTTA-----------AAATCATTTGCGACATTCATGCAAACAAAATGTTAGCGTTATGATATATATTTATGGGAAGGGTATGAATGCGTTGTGGCGCATAAAGATTATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................AAGGGTATGAATGCGTTGTGGCGC............24112.0012510060
......................................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTTGTGGC..............2612.002100010
....................................................................................................................................................................................................................................TATGGGAAGGGTATGAATGCGTTGTGG...............2712.002100010
......................................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTTGTGG...............2512.002100010
...................................................................................................................................................................................................TGCAAACAAAATGTTAGCGTTATGA..................................................2512.002200000
...........................................................................................................................................TGAGTGAAGAGTATACCGAAATCT...........................................................................................................24141.932712100311
...........................................................................................................................................TGAGTGAAGAGTATACCGAAATCTT..........................................................................................................25141.6423820049
..........................................................................................................................................................................................................................................AAGGGTATGAATGCGTTGTGGC..............2211.001100000
.......................................................................................................................................................................................................................................GGGAAGGGTATGAATGCGTTGTGG...............2411.001100000
..........................................................................................................................................................................................................................................AAGGGTATGAATGCGTTGTGGCGCA...........2511.001000010
....................................................................................................................................................................................................GCAAACAAAATGTTAGCGTTATG...................................................2311.001100000
......................................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTTGTGGCG.............2711.001100000
..TCGAGTTACATAAATGAATTTATGGGA.................................................................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................TGCAAACAAAATGTTAGCGTTATGAT.................................................2611.001000001
...........................................................................................................................................................................................................................................AGGGTATGAATGCGTTGTGGCGCA...........2411.001010000
..................................................................................................GTCGAGTCT--TCCAGAAAGTTTCCC-AGC-.............................................................................................................................................2711.001000010
...................................................................................................................................................................................................TGCAAACAAAATGTTAGCGTTATG...................................................2411.001100000
...........................................................................................................................................................................................................................................AGGGTATGAATGCGTTGTGGCGC............2311.001100000
....................TTTATGGGAATTCTGGATGCC.....................................................................................................................................................................................................................................2111.001000010
...........................................................................................................................................................................................................................................AGGGTATGAATGCGTTGTGGC..............2111.001000010
...........................................................................................................................................TGAGTGAAGAGTATACCGAAATCTTA-----------..............................................................................................26141.0014620015
.....................................................................................................................................................GTATACCGAAATCTTA-----------AAATCATTTGC...................................................................................2730.672100010
.......................................................AATTGAGC----TATGCGACGAATTGCGC..........................................................................................................................................................................................25120.506400020
......................................................................................................................................CGTTTTGAGTGAAGAGTATACCG.................................................................................................................2320.501100000
...............................................ACAGTAGGAATTGAGC----TATGCGACG..................................................................................................................................................................................................25110.455400010
.......................................................AATTGAGC----TATGCGACGAATTGCG...........................................................................................................................................................................................24120.425300002
....................................................................................................................................................AGTATACCGAAATCTTA-----------AAATCATT......................................................................................2530.331100000
.....................................................................................................................................................GTATACCGAAATCTTA-----------AAATCATT......................................................................................2430.331100000
...................................................TAGGAATTGAGC----TATGCGACGAAT...............................................................................................................................................................................................24120.334100003
.......................................................AATTGAGC----TATGCGACGAATTGCGCAG........................................................................................................................................................................................27120.334100003
....................................................................................................................................................AGTATACCGAAATCTTA-----------AAATCATTTGC...................................................................................2830.331000010
.....................................................................................................................................................GTATACCGAAATCTTA-----------AAATCATTT.....................................................................................2530.331100000
TTTCGAGTTACATAAATGAATC........................................................................................................................................................................................................................................................2240.251000010
...........................................................................................................................................TGAGTGAAGAGTATACCGAAATC............................................................................................................23170.244300010
...........................................................................................................................................TGAGTGAAGAGTATACCGAAATCTTA-----------A.............................................................................................27140.213200001
..................................................................................................................................................................................................................................TTTATGGGAAGGGTATGAATGCGTTG..................26200.204400000
...............................................ACAGTAGGAATTGAGC----TATGCGACGA.................................................................................................................................................................................................26110.182100001
...............................................ACAGTAGGAATTGAGC----TATGCGA....................................................................................................................................................................................................23110.182200000
........................................................ATTGAGC----TATGCGACGAATTGCGC..........................................................................................................................................................................................24120.172100010
...................................................TAGGAATTGAGC----TATGCGACGAATTG.............................................................................................................................................................................................26120.172200000
.......................................................AATTGAGC----TATGCGACGAATTGCGCA.........................................................................................................................................................................................26120.172200000
......................................................................................TATTATTTTGCTGTCGAGTCT--TCCAG............................................................................................................................................................26120.172100001
.........................................................TTGAGC----TATGCGACGAATTGCGC..........................................................................................................................................................................................23130.152110000
.........................................................................................................................................TTTGAGTGAAGAGTATACCGAAATCT...........................................................................................................26130.152100010
.........................................................................................................................................TTTGAGTGAAGAGTATACCGAAATCTT..........................................................................................................27130.152100001
..........................................................TGAGC----TATGCGACGAATTGCGCAGT.......................................................................................................................................................................................25130.152000002
...........................................................................................................................................TGAGTGAAGAGTATACCGAAATCTTA-----------AA............................................................................................28140.142000002
..................................................................................................................................................................................................................................TTTATGGGAAGGGTATGAATGCG.....................23200.102100010
......................................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTTG..................22200.102200000
....................................................................................................................................................................................................................................TATGGGAAGGGTATGAATGCGTTG..................24200.102200000
...............................................ACAGTAGGAATTGAGC----TATGCGAC...................................................................................................................................................................................................24110.091100000
..............................................GACAGTAGGAATTGAGC----TATGCGA....................................................................................................................................................................................................24110.091000001
..............................................GACAGTAGGAATTGAGC----TATGCGAC...................................................................................................................................................................................................25110.091000001
...............................................ACAGTAGGAATTGAGC----TATGCG.....................................................................................................................................................................................................22110.091000010
..............................TTCTGGATGCCCTTGGGACAG...........................................................................................................................................................................................................................21120.081100000
......................................................GAATTGAGC----TATGCGACGAATTGCGC..........................................................................................................................................................................................26120.081100000
...................................................TAGGAATTGAGC----TATGCGACGAATTGCG...........................................................................................................................................................................................28120.081100000
.......................................................AATTGAGC----TATGCGACGAATTGC............................................................................................................................................................................................23120.081100000
......................................................GAATTGAGC----TATGCGACGAATTGCG...........................................................................................................................................................................................25120.081000001
...................................................TAGGAATTGAGC----TATGCGACGA.................................................................................................................................................................................................22120.081100000
......................................................................................TATTATTTTGCTGTCGAGTCT--TCCA.............................................................................................................................................................25120.081000001
..............................................GACAGTAGGAATTGAGC----TA.........................................................................................................................................................................................................19120.081000001
...................................................TAGGAATTGAGC----TATGCGACGAATTGCGC..........................................................................................................................................................................................29120.081000010
.......................................................AATTGAGC----TATGCGACGAATTGCGCAGT.......................................................................................................................................................................................28120.081000001
.........................................................TTGAGC----TATGCGACGAATTGCGCAG........................................................................................................................................................................................25130.081000001
.........................................................TTGAGC----TATGCGACGAATTGCGCA.........................................................................................................................................................................................24130.081100000
............................................................................................................................................GAGTGAAGAGTATACCGAAATCTTA-----------..............................................................................................25140.071100000
.........................................................................................................................................TTTGAGTGAAGAGTATACCGAAATC............................................................................................................25140.071000010
..........................................................................................................................................TTGAGTGAAGAGTATACCGAAATCT...........................................................................................................25140.071100000
........................................................................................................................................TTTTGAGTGAAGAGTATACCGAAATC............................................................................................................26140.071100000
...............................................................................................................................................TGAAGAGTATACCGAAATCT...........................................................................................................20160.061000001
.........................................................................................................................................TTTGAGTGAAGAGTATACCGAAA..............................................................................................................23160.061100000
.........................................................................................................................................TTTGAGTGAAGAGTATACCG.................................................................................................................20190.051100000
.......................................................................................................................................................................................TTGCGACATTCATGCAAACAAAATGTTAG..........................................................29200.051100000
..........................................................................................................................................................................................................................................AAGGGTATGAATGCGTT...................17200.051000100
..........................................................................................................................................................................................................................GATATATATTTATGGGAAGGGT..............................22200.051100000
..................................................................................................................................................................................................................................TTTATGGGAAGGGTATGAATG.......................21200.051100000
.....................................................................................................................................................................................................................................ATGGGAAGGGTATGAATGCGTT...................22200.051000010
..................................................................................................................................................................................................................................TTTATGGGAAGGGTATGAATGCGTT...................25200.051100000
..................................................................................................................................................................................................................................TTTATGGGAAGGGTATGAATGC......................22200.051010000
..............................................................................................................................................................................................................................TATATTTATGGGAAGGGTATG...........................21200.051100000
.................................................................................................................................................................................................................................ATTTATGGGAAGGGTATGAATG.......................22200.051100000
..............................................................................................................................................................................................ATTCATGCAAACAAAATGTTAGCG........................................................24200.051100000
......................................................................................................................................................................................................................................TGGGAAGGGTATGAATGCGTT...................21200.051100000
.............................................................................................................................................................................................CATTCATGCAAACAAAATGTTAGCGT.......................................................26200.051000001
......................................................................................................................................................................................................................................TGGGAAGGGTATGAATGC......................18200.051010000
...............................................................................................................................................................................................TTCATGCAAACAAAATGTTAGCGTT......................................................25200.051100000
......................................................................................................................................................................................TTTGCGACATTCATGCAAACAAAATGTT............................................................28200.051100000
droVir3
TGCAAAACTATATGAATGAGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
TGGCTAGCTATTTGATCACATTTATTGAAATCGTGGATCAGCTTGCCGGAGTTGGAATAGCAA----TAGTTGACGAGCT---CAAGGTCATTTTGCTTTCCAGTCT--TCCAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TATCGAGTTTTTTGTCGGATTTCAAGGAAGTCTTGGACAAACTTGCTGGTGTCGGAATCGAAA----TATTGGACGCGCTTATAACGATTATTTTGCTTTCCAGTCT--TCCAGACGAATTCGACAAT-TTCGTTGTTGCCATAGAGACGCGTTTCGACATTTTA---------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................AACGATTATTTTGCTTTCCAGTCT--TC...............................................................................................................................................................2690.11101000
.....................................................................................................CAGTCT--TCCAGACGAATTCGACAAT-T............................................................................................................................................26200.05101000
..........................................................................................................T--TCCAGACGAATTCGACAAT-TTCGT........................................................................................................................................25200.05101000
.....................................................................................................CAGTCT--TCCAGACGAATTCGACA................................................................................................................................................23200.05101000
dp5
TTTCAAGCTACATTAATGAGTTCATGGATATTCTTGATGGCCTTGGGTCAGTAGGAATCGAGC----TAAATGATGAACTGCGCTCAATTGTTTTGTTGTCAAGCCT--TCCAGAACAATTC----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....AGCTACATTAATGAGTTCATGGATAT...............................................................................................................................................................................................................................................2612.0020200000000
...........................................TGGGTCAGTAGGAATCGAGC----TAAATGA....................................................................................................................................................................................................2751.0050000000140
........................................................ATCGAGC----TAAATGATGAACTGCGC..........................................................................................................................................................................................2480.6350300000110
............................................................................................TTTGTTGTCAAGCCT--TCCAGAAC.........................................................................................................................................................2370.5740300000010
.......................................................AATCGAGC----TAAATGATGAACTGCGC..........................................................................................................................................................................................2580.5040100000300
......................................................GAATCGAGC----TAAATGATGAACTGCGCT.........................................................................................................................................................................................2780.5040000000400
...............................................................................................GTTGTCAAGCCT--TCCAGAACAAT......................................................................................................................................................2370.4330300000000
............................................................................................TTTGTTGTCAAGCCT--TCCAGAACA........................................................................................................................................................2470.4330300000000
.......................................GCCTTGGGTCAGTAGGAATCGA.................................................................................................................................................................................................................2260.3320200000000
.....................................TGGCCTTGGGTCAGTAGGAATCGAGC----...........................................................................................................................................................................................................2660.3320100000010
...............................................................................................GTTGTCAAGCCT--TCCAGAACAATT.....................................................................................................................................................2470.2920200000000
...............................................TCAGTAGGAATCGAGC----TAAATGA....................................................................................................................................................................................................2370.2920200000000
..................................TGATGGCCTTGGGTCAGTAGGAATC...................................................................................................................................................................................................................2540.2510100000000
..................................TGATGGCCTTGGGTCAGTAGGAAA....................................................................................................................................................................................................................2440.2510000001000
...................................................................TAAATGATGAACTGCGCTCAATTG...................................................................................................................................................................................2480.2520200000000
...................................................................TAAATGATGAACTGCGCTCAATTGT..................................................................................................................................................................................2580.2520000000200
..............................TTCTTGATGGCCTTGGGTCAGTA.........................................................................................................................................................................................................................2340.2510100000000
...........................................TGGGTCAGTAGGAATCGAGC----...........................................................................................................................................................................................................2060.1710000000010
................................................................................................TTGTCAAGCCT--TCCAGAACAATTC----------------------------------------------------------------------------------------------------------------------------------------------------2460.1710100000000
........................................................................GATGAACTGCGCTCAATTGTTTTGT.............................................................................................................................................................................2570.1410100000000
.................................................AGTAGGAATCGAGC----TAAATGATGAAC...............................................................................................................................................................................................2670.1410100000000
...............................................TCAGTAGGAATCGAGC----TAAATG.....................................................................................................................................................................................................2270.1410100000000
.............................................................................................TTGTTGTCAAGCCT--TCCAGAACAATT.....................................................................................................................................................2670.1410100000000
............................................................................................TTTGTTGTCAAGCCT--TCCAGAACAATT.....................................................................................................................................................2770.1410100000000
..............................................................................................TGTTGTCAAGCCT--TCCAGAACA........................................................................................................................................................2270.1410100000000
............................................................................................TTTGTTGTCAAGCCT--TCCAGAA..........................................................................................................................................................2270.1410100000000
............................................................................................TTTGTTGTCAAGCCT--TCCAGAACAA.......................................................................................................................................................2570.1410100000000
.............................................................................................TTGTTGTCAAGCCT--TCCAGAACAAT......................................................................................................................................................2570.1410100000000
............................................................................................TTTGTTGTCAAGCCT--TCCAGA...........................................................................................................................................................2170.1410100000000
.............................................................................................TTGTTGTCAAGCCT--TCCAGAACAA.......................................................................................................................................................2470.1410100000000
.............................................................................ACTGCGCTCAATTGTTTTGT.............................................................................................................................................................................2080.1310100000000
.................................................AGTAGGAATCGAGC----TAAATGATG..................................................................................................................................................................................................2380.1310100000000
...................................................TAGGAATCGAGC----TAAATGATGAACC..............................................................................................................................................................................................2580.1310000000010
..............................................................................CTGCGCTCAATTGTTTTG..............................................................................................................................................................................1880.1310000000100
.........................................................TCGAGC----TAAATGATGAACTGCGC..........................................................................................................................................................................................2380.1310100000000
....................................................................AAATGATGAACTGCGCTCAATTGT..................................................................................................................................................................................2480.1310100000000
..............................................................................CTGCGCTCAATTGTTTTGTTGT..........................................................................................................................................................................2280.1310100000000
............................................................................AACTGCGCTCAATTGTTTT...............................................................................................................................................................................1980.1310100000000
.......................................................AATCGAGC----TAAATGATGAACTGC............................................................................................................................................................................................2380.1310000000010
.......................................................AATCGAGC----TAAATGATGAACTGCGA..........................................................................................................................................................................................2580.1310000000010
........................................................ATCGAGC----TAAATGATGAACTGCG...........................................................................................................................................................................................2380.1310000000010
droPer2
TTTCAAGCTACATTAATGAGTTCGTGGATATTCTT---GGCCTAGGGTCAGTAGGAATCGAGC----TAAATGATGAGCTGCGCTCAATTGTTTTGTTGTCAAGCCT--TCCAGAACAATTCGAAAAT-TTCGTTTT-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........ACATTAATGAGTTCGTGGATATTC.............................................................................................................................................................................................................................................24200.051010000
.........ACATTAATGAGTTCGTGGATATTCTT---........................................................................................................................................................................................................................................26200.051010000
TTTCAAGCTACATTAATGAGTTCGTG....................................................................................................................................................................................................................................................26200.051010000
droAna3
TGGCTGAATATGTAAACTCATTTGTTGAAATCACAGACAAATTGGCCGAATTAGATATTAATA----TCAATGACGTGTTGAAAGTTATAATGATGTTGACTAGTTT--GCCAAATAATTTTGAAAAC-TTTGTTGTGGCAATCGAAACACGTG---AAAAATTACCATCATTTG-----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................TT--GCCAAATAATTTTGAAAAC-TTTGTTG......................................................................................................................................28100.101100000
.........................................................................................................................TGAAAAC-TTTGTTGTGGCAATCG.............................................................................................................................23110.091100000
.......................................................................................................................TTTGAAAAC-TTTGTTGTGGCAATC..............................................................................................................................24110.091010000
................................ACAGACAAATTGGCCGAATTAGA.......................................................................................................................................................................................................................23110.091100000
..........................................................................................ATGATGTTGACTAGTTT--GCCA.............................................................................................................................................................21110.091100000
.................................CAGACAAATTGGCCGAATTAGATAT....................................................................................................................................................................................................................25110.091100000
..........................................................................................ATGATGTTGACTAGTTT--GCCAAA...........................................................................................................................................................23110.091100000
.....................................................................................................................ATTTTGAAAAC-TTTGTTGT.....................................................................................................................................19120.081010000
....................TTTGTTGAAATCACAGACAAATTGGCC...............................................................................................................................................................................................................................27120.081010000
...........................AAATCACAGACAAATTGGCCGAAT...........................................................................................................................................................................................................................24120.081100000
.......................GTTGAAATCACAGACAAATTGGCCGA.............................................................................................................................................................................................................................26120.081100000
droBip1
TGACGACCTACATAAGTGAATTTGTGGAAATTCTGGATTGTCTAACTGGAGTTGGAATAGAGA----TAAACGACGAACTTCGCACTATCGTTTTGCTATCAAGTCT--TCCAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGACCAGTTACATCAATATGTTTGTCGAAATTTTGGATCAGCTTGCAAGTGTTGGAATCGATT----TAAATGAAGAGCTAAGAGCAATCATTCTACTCTCCAGCCT--TCCAAAAGATTCCGAAAGC-TTTGTTGTTGCTATTGAAACGCGTG---ACAATTTACCGGCATTCGAGAATC-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGGTGACTTACATAAGTGAGTTCGTGGAAATTCTGGATGGTTTAGCTGGAATAGGCATAGAGC----TAAACGATGAACTTCGCACTATCGTTTTGCTGTCGAGCCT--TCCAGAACAGTTC----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGACCGGCTACATAAGTGTGTTTATCGAAATCTTAGATCAACTTGCAAGTGTGAATATCGATC----TAAATGAAGAGCTGAGAGCAGTCATTTTACTTTCCAGTCA--TCCAAAAGACTATGAAGGT-TTTGTTGTTTC---------GCGTG---ACGATTTACCGGCGTTTGAAAATC-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGTCTACCTATATAAGCGAATTTGCAGAAATTCTGGATGGCCTAGCTGGAGTTGGAATAGAGC----TAAACGATGAACTACGAACTATCGTTTTGCTGTCGAGTCT--TCCAGAGCAGTTT----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TATCCAGTTATATTCATGAATTCCTGGAAGTTCTGGATGGTCTAATTTCAGTTGGAATAATCC----TAAAGGAGGAGCTAGGCACAGTTGTTTTACTCTCGAGTCT--TTCAGAACATTT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TATCCAGCTATATTAACGAATTCCTGGATATTTTGGATGGTCTAACCTCAGTTGGAATCGATC----TAAACGAGGAGCTACGCAGAATTGTTCTACTGTCGAGCCT--TCCAGAACAATTC----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGACGACCTACATAAGTGAATTTTTGGAAATTCTGGATGGTCTAACCGGAGTTGGAATAGAGC----TAAACGATGAACTACGCACTATCGTTTTGCTATCGAGCCT--TCCAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TATCGTCACATATTAAAGAATTTAAGGAAATCTTTGATGCCCTTGATGCAGTGGAAATTGGTA----TCACCGAGAAATTGCGCAGTGTTGTTTTGCTGTCGAGCCT--TCCAGAGAGTTTC----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................TTGCGCAGTGTTGTTTTGCTG...........................................................................................................................................................................2120177.45354900000000000000000000000000701000000000000001000000100002000000000000000000000000000000000400000000000000005560000000000000000000000000000000000000400001400040000000001037900000000000000025067131000020000000000000000000000110010000100000007665100000000000170290087012180000698006001971000018000250000006800000000001500000000012923660000034000000800000003361005240
...........................................................GGTA----TCACCGAGAAATTGCGC..........................................................................................................................................................................................212086.351727000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000020000200000002810002170000000000000006600175040000000000000000000000000000000000000000030000000004000546000000007900057426080000000001100000001000000000000000010400000015100190000000000000000000000
....................................................................................AGTGTTGTTTTGCTGTCGAGC.....................................................................................................................................................................212079.9515990000000000000000000000000000000000000000000000000000000000000000000000000000000010000003000000000000000030000000000000000000000000000000000000000000000000010200025000000000000000000002900000000000000000000000000003618000000000000000142000000057024700000150024010010642401500048000014000010001000000000000078002010000213147100370000103560000000000010901970
............................................................................AATTGCGCAGTGTTGTTTTGC.............................................................................................................................................................................212079.85159700000000000000000400000000000000000000001000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000012000000200004000000950092540000000000000002764100600001000000000000000000000368000000000000048540000000330025001900160403100030000001351110000000030004058000000020000000200000050020010070000313907000000020791161170
.....................................................................ACCGAGAAATTGCGCAGTGTT....................................................................................................................................................................................212070.801416000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000009300745200000000000000002317013500000000000000000000000006303200000000000006000000000000000006000000003500004200000000000000155015000000000000000000000810000046010067500000000003449000
.........................................................................................TGTTTTGCTGTCGAGCCT--TCC..............................................................................................................................................................212066.1513230000000000000000050000000051000000000000000000000000001600000000000000000000000000000000400000000000000008900000000000000000000000000000000000100300000000000010014798300062000000000000000446070046000000000000000004000010003010000000100400546000000002300000130000000000002303100140000420001000621012000000000000020000000020001304000000020000000018333700
........................................................................................TTGTTTTGCTGTCGAGCCT--TC...............................................................................................................................................................212061.3012260000000000000000030000000000000000000000000000000000005260000000000000000000000000000000010000000000000000070000000010000000000000000000000000000000010000000000400860161760000000000000000146001580001000000000000000000000131511000000010000087980000000000000000002047000020000109117000400000000021017000000000000000100000020010062001010200000000004040000
...........................................................................AAATTGCGCAGTGTTGTTTTG..............................................................................................................................................................................212043.4586900000000000000000000000000020000000000001000000000000010000000000000000000000000000000000000000100000000075200000000100000000000000000000000000000000000000600020053106404800000000000000000400000100100101000000000000000382200000000000100000000000001900000000056000000040030000005000000003204500000010004601121001000322000000000018400000000010009800
.............................................................TA----TCACCGAGAAATTGCGCAG........................................................................................................................................................................................212042.95859000000000000000000000000006000000000000000000000000000000000000000000000000000000000000200000000000000000040000000000000000000000000000000000010000000000000000022101202030000000000000000044007700000000000000000000000000030012000000000031700000000001700000000400000900000000000110101000000000000000000000000000000000010000010000000000010350470
......................................................................................TGTTGTTTTGCTGTCGAGCCT--.................................................................................................................................................................212041.50830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001100000000000000000000000000000000001205000000000200218182008133000000000000000017605801100000000000000010000000001318820000020000000000000001400124000040001000008000001000000000260000120110000001000000000000000200000000106406000000010039680
...........................................................................................TTTTGCTGTCGAGCCT--TCCAG............................................................................................................................................................212040.25805000000000000000000000000101210000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000001400166000107000000000000000000010000000000000000000000300047000000000000001822000000038000005001000150000230000501000020004003481810000000000800001000008100000000009100000000051230000
.............................................................................ATTGCGCAGTGTTGTTTTGCT............................................................................................................................................................................212038.607720000000000000000000000000032000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000001300392500000000000000045800000000000000000000000000002500000000000000421010000000002070800110040000112900004000000000020030260330000000000000310020017901000180470000000000030000016200
..................................................................................................GTCGAGCCT--TCCAGAGAGTTT.....................................................................................................................................................212036.5073000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000030000000000000005200000000000000000000000052000000000000000000000000000000000000000000070000000000000000000060000000000000000000000000014000000000000160000000000000000044000200000001000620000
................................................................................................CTGTCGAGCCT--TCCAGAGAGT.......................................................................................................................................................212033.90678000000000000000000000000004000000000000000000000000000000000000000000000000000000000000020100000000000000000600000000000000000000000000000000000000000000000000000002700000000000000000000142099000000000000000000000000000220000000000000256018000000000900000000000000001000000000000000001000250000000000000000000000000001000020000000000080000
.......................................................................................GTTGTTTTGCTGTCGAGCCT--T................................................................................................................................................................212030.256050000000000000000000000000043000000001000000000000001000000000000000000000000000000000001000000000000000001030000000000000000000000000000001000000000000000000010004355038000000000000010001200000000000000000004000000002401500000000000102120000000000090000020036000000000000000000010000013451100000000000000000000138000030000000003000000000570730
.........................................................................AGAAATTGCGCAGTGTTGTTT................................................................................................................................................................................212027.455490000000000000000000000000010710000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100300000000003400000000000000000000000004000000000000000002000000000000000000100910000000022500000000001000000000600000600000000130232850000005000000000000000000000000000000001000000000
...................................................................................CAGTGTTGTTTTGCTGTCGAG......................................................................................................................................................................212026.9553900000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061400000000000000000000000000000000000001000100000300000000963330000000000000001601450040000000000000000000000000008000010001100115000000000001000000000000003000300300000000000000017019000000000000011000005801000600010000200000000901900
.................................................................................CGCAGTGTTGTTTTGCTGTCG........................................................................................................................................................................212026.7553500000000000000000000000000620000000000000000000000010000000000000000000000000000000000000000000000000000025000000000000000000000000000000000000000002200010000806240130344000000000000000086021000000000000000000000000000065010000000000000000000012900320000000400000010000041000000000000017300000000001000010000800000003000016100000000057100
................................................................................GCGCAGTGTTGTTTTGCTGTC.........................................................................................................................................................................212025.10502000000000000000000000000000000000000000000000100000000000000000000000000000000000000000300000000000000000060000000100000000000000000000000000000000000000000000038020010000000000000000711101140000000000000000000000000400000000000000380000000000030001200002900005460080010080004000000013283800000000000000001000001010001000000801000000015448000
............................................................GTA----TCACCGAGAAATTGCGCA.........................................................................................................................................................................................212023.154630000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000130000000010000000000000000000000000000000000000000000001674100094000000000000000000000000000000000000000000000000000000000000000000000000000050000000000010000000300000000000000103500000000000001000000000000300000000110000000002103800
.............................................................................................TTGCTGTCGAGCCT--TCCAGAG..........................................................................................................................................................212023.104620000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000008000000000000000000000000000000000000000000000000005200001900000000000000000093023014900000000000000000001000000140000000000010064000000000000000000004800000301002900000000000000300000000000030000000000600000014000000000000000801700
..................................................GTGGAAATTGGTA----TCACCGAG...................................................................................................................................................................................................212022.75455000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000060000000000000000019422001100000000000000000000000002808000000000000000000000000000000000000000000040060000000000000000000000000000000000000015501000002000000000000000160000
.................................................................................................TGTCGAGCCT--TCCAGAGAGTT......................................................................................................................................................212021.55431000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000007340000000000000000000000001000160230000000000000960000000000000000000000000000010000100000000000001100000000000000000000001630000100000000000000000000000
...................................................................................................TCGAGCCT--TCCAGAGAGTTTC----------------------------------------------------------------------------------------------------------------------------------------------------212021.104220000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000013000000000000000000000000000000000000000000000000000000019600170000000000000000003902000000000000000000000000000036000000000000000300000000020040000001100000700000000000000040000011000000000000000000000013200200190000000000000001300200
............TTAAAGAATTTAAGGAAATCT.............................................................................................................................................................................................................................................212018.65373000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102200020000000000000003021701000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000003000000000180000100000000000000000000400
.......................................................................CGAGAAATTGCGCAGTGTTGT..................................................................................................................................................................................212016.8033600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000041800000000000000000018012000000000000000000000000000190000000000000000000000015000004000040010000000100210000050000000000160000000000000000000013000000000001000600000000005100
.....................TTAAGGAAATCTTTGATGCCC....................................................................................................................................................................................................................................212016.20324000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000001190000000000000000009000000000000000000000000000504700000000000013250000000230000000000200000000000020000000000000008200000000000040000000000600000040000000000000002204300
..............................................................................................TGCTGTCGAGCCT--TCCAGAGA.........................................................................................................................................................212016.10322000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111600000000000000000000100000000000000000000000000000100250010000000000000000025000000000000000000000000000004000000202004104013820000001100010200100000000000000001000000000001000400000000000011000000000000000000016000000000013015160
............................................GATGCAGTGGAAATTGGTA----TC.........................................................................................................................................................................................................21116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TGTCGAGCCT--TCCAGAGAGTTT.....................................................................................................................................................222015.65313000000000000000000000000004600000000001000000000000000000010000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000070197000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000002000300200
....................................................................................AGTGTTGTTTTGCTGTCGAG......................................................................................................................................................................202012.552510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100017000290000000000000002436100000000000000000000000000603100000000000150000000000001000000000000003000005000000001000002124000000000000000000100212200006000000300000000000180000
...................ATTTAAGGAAATCTTTGATGC......................................................................................................................................................................................................................................212012.50250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001030080000000000000000000000000000000000000000000000001000000000001014000000000020300004000000000000000000000000000000000000000000000000000001860000000000000000000000000000
..........................................................................................GTTTTGCTGTCGAGCCT--TCCA.............................................................................................................................................................212012.35247000000000000000000000000001000000000000000000000000000000000000000000000000000000000000600000000000000002000000000000000000000000000000000000000000000000000000002302000000000000000000114101800000000000000000000000000350000000000000100000000700000000200000000000000031000100000000080400000000000000000000441000000000002500000000010910180
........................................................................................TTGTTTTGCTGTCGAGCCT--TCC..............................................................................................................................................................222011.702340000000000000000000000000031000000000000000000000000000000000000000000000000000000000001000000000000000010000000001000000000000000000000000000100000000000000000320233900000000000000004415701000000000000000000000000001830000000000000001000000300000000000050000000000030000000000000402000000000000000000000000010007000080000000000480160
.................................TTGATGCCCTTGATGCAGTGGAAAT....................................................................................................................................................................................................................25111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TATCGTCACATATTAAAGAAT.........................................................................................................................................................................................................................................................212010.85217000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000100000000000000000010020000066052000000000000000000027070000000000000000000000000181700100000000003130000000000000000000002000000000000000000000000000013000000000000000000000000010000000120000000000701700
...................................................TGGAAATTGGTA----TCACCGAGA..................................................................................................................................................................................................212010.50210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000020000000000000000000000000000000000000000000000000300000000010000000000000000000000000000000000000000200000000007080000000000000000003000000000000000106000010000000000000000000002010000000440000000000000000000000000080
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..............................................................................TTGCGCAGTGTTGTTTTGCTT...........................................................................................................................................................................21201.703400000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001310003000000000000000601000000000000000000000000000000000000000000000000000010000010010000000000000003000000000000000010000000000000000000000000000000000000000000000010
.................................................................................CGCAGTGTTGTTTTGCTGTC.........................................................................................................................................................................20201.70340000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000020030000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000140100000000000300100000018000020000001000000000001020
..........................................................................GAAATTGCGCAGTGTTGTTTTGCTG...........................................................................................................................................................................25201.653300000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000002002003000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000020000000000000000000000010000010000000001610000000000000000000000000
.........................................................................AGAAATTGCGCAGTGTTGT..................................................................................................................................................................................19201.653300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000300000000001000000000001010000000003000
.............................................................................................TTGCTGTCGAGCCT--TCCAGAGAGTT......................................................................................................................................................25201.65330000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001300000700000000000000001020503100000000000000000000000000000000000001000000000000000000000001000000000000000400000000000010000000001000
.............................................................TA----TCACCGAGAAATTGCGCAGTGTT....................................................................................................................................................................................25201.60320000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000710000500000000000000000000000000000000020200000000000003000000000000500000000000000001000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...........................................................GGTA----TCACCGAGAAATTGCG...........................................................................................................................................................................................20201.603200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010012000000000000000000000000000000000000000000000500000000000000000000000000000000000010000001000000000000000000000600000000000200000000040000000000000000000000000000
..............................................................................TTGCGCAGTGTTGTTTTGCTGTCG........................................................................................................................................................................24201.60320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000400500000000000000000000000000000000000000000000000000000000000000000000000020000000000000000010010022000000000000000020000000000100200000000201000000001000000000005000
.............................................................................................TTGCTGTCGAGCCT--TCCAGA...........................................................................................................................................................20201.60320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001090000000000000000000030000000000000000030100000000000100000000000006000000000000000020000000001020110000000000000000000000000000000000000000000000000000000000000000100
................................................................................................CTGTCGAGCCT--TCCAGAGA.........................................................................................................................................................19201.603200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000190000000000000000000000000000000000000000005000000000000000000000000001000000000000000000000000000000000000000000050000000000000000000000000000
..............................................................................................TGCTGTCGAGCCT--TCCAGAGAGT.......................................................................................................................................................23201.60320000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000064000000000000000302000000000000100000002210002000000010000000000000000000000000000000000000000100000000000000000000020000000000000000000000000200
.........................................................................................TGTTTTGCTGTCGAGCCT--TCCAGAGA.........................................................................................................................................................26201.60320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000002100000000000000060400030000000000000000000000000000000000000000000000000000000000000000000000000000910000000000000000000000000
............................................................................................TTTGCTGTCGAGCCT--TCCAGAGA.........................................................................................................................................................23201.55310000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000300050001000100100000000003000000000000000000100000100001000000300000000000000050000030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................TTGCGCAGTGTTGTTTTG..............................................................................................................................................................................18201.553100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000600000000000000000200700000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000001000000000000000000200000000000000000000
.............................................................................ATTGCGCAGTGTTGTTTTGCTGTCG........................................................................................................................................................................25201.553100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000002000000000000000000000000000000000100000000000020000000000000000000000000000001000000000001001000000000000000019300
.............................................................TA----TCACCGAGAAATTGCGCAGT.......................................................................................................................................................................................22201.50300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000080000000000000000000000000000000000002000000000000000000000000004000000000000300000000063000000000000000000000000000
.............................................................TA----TCACCGAGAAATTGCGCAGTGTTGT..................................................................................................................................................................................27201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060030000000000000000000000000000000000000000000010000000000000000000000000000010070000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
............................................................................AATTGCGCAGTGTTGTTTTGCT............................................................................................................................................................................22201.45290000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000200000000000000000000000000100000000001000000000000000000000000000000000000000000000000000003000000000000100000000007000000000003000000000006030
.....................................................................ACCGAGAAATTGCGCAGTGT.....................................................................................................................................................................................20201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001600000000000000000000000030000000000000000000000000000000000000000102000000000000000000010000001000000000000000000000000000000000000000000000000000100000000000000103000
...........................................................................................TTTTGCTGTCGAGCCT--TCCAGAGAG........................................................................................................................................................25201.45290000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010004300000000000000000000000000000000000000300000000000000008000300000200000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000100000
..........................................................................................GTTTTGCTGTCGAGCCT--TCCAG............................................................................................................................................................22201.402800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001500010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010100000000000000002600
...........................................................................................TTTTGCTGTCGAGCCT--TCCAGAG..........................................................................................................................................................23201.402800000000000000000000000010000000000100000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000100000000000000000001100200001000000000100000000000000000100000300000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000020000000
........................................................ATTGGTA----TCACCGAGAAATTGCGCAGT.......................................................................................................................................................................................27201.35270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300300000000000000000000000000000000000000100000000000000000000000001000009800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
.....................................................................ACCGAGAAATTGCGCAGTG......................................................................................................................................................................................19201.352700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002500000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATTGGTA----TCACCGAGAAATTGCGCAG........................................................................................................................................................................................26201.35270000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000010000000000000000000000000000000000000000000000000000020000000000300002203010000000000000000000000000000000000000000000000000000000000000000000100000000700000000000000000000001000
.............................................................................................TTGCTGTCGAGCCT--TCCAGAGT.........................................................................................................................................................22201.352700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001800000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000400002000000000000000
.....................TTAAGGAAATCTTTGATGCCCTT..................................................................................................................................................................................................................................23201.302600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TGCGCAGTGTTGTTTTGCTGTCGAGC.....................................................................................................................................................................26201.25250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000201004000020000400000000000000000000000000000000000000000000000000000000000000030100100000000000000000000000000000000000000000000000000000000000000000001000000000200000100000000001000000100
.............................................................................................TTGCTGTCGAGCCT--TCCAG............................................................................................................................................................19201.252500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000010000001000010000000000000000000000000000000000000000000060000000000000000000000004000
.........................................................................AGAAATTGCGCAGTGTTGTTTT...............................................................................................................................................................................22201.25250000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200205000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000004000
.........................................................TTGGTA----TCACCGAGAAATTGCGCAGTG......................................................................................................................................................................................27201.25250000000000000000000000000000000000002000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000100000000000000060000100000002000000000000000000000000000000000000000000000000000000000000000000100000000000030000000000000000100003000
...........................................................................................TTTTGCTGTCGAGCCT--TCC..............................................................................................................................................................19201.252500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000600000000000000000000000000000000000000000000001000
.....................................................................ACCGAGAAATTGCGCAGTGTTG...................................................................................................................................................................................22201.25250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000002000000000000000005000000000000000000000000000000000000000000000000000000000000000100000000020000000000000000000000000000000000000000200000000000000100000000000020000007000000000100000
.........................................................TTGGTA----TCACCGAGAAATTGCGCA.........................................................................................................................................................................................24201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050001000001000000000000000000000000000000000000101000000000000000030000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................................CACCGAGAAATTGCGCAGTG......................................................................................................................................................................................20201.20240000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000003000000000000000000020000000000000000000000000000003000000000000000000000000000000000000000000000001000000000000010100000000000001000000060100000000000000000000000000
...................................................TGGAAATTGGTA----TCACCGAG...................................................................................................................................................................................................20201.152300000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112000000000000000000000000000000000000000000100000000000000000010000000006000000000000000000000000000000000000000000000000000000000000000000000000
TATCGTCACATATTAAAGAATT........................................................................................................................................................................................................................................................22201.10220000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000300100000000000000000000000000000000000100000000000000000000000010004000000000000000000000000000000000100000000100010100000000000000000000000110000000000000000000000000
............................................................................AATTGCGCAGTGTTGTTTTGCTGT..........................................................................................................................................................................24201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000702210200000000000000000000000000000000000000000000000000000000000000000000000003000000020000000000000000000000000
.....................TTAAGGAAATCTTTGATGC......................................................................................................................................................................................................................................19201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000180000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000000000000000000410
....................................................................................AGTGTTGTTTTGCTGTCGAGCC....................................................................................................................................................................22201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000050004000000000000000000000000000000000000000000000000000000001000000000000010000000000010000010000000000000010000000200000000000000000000002000020000000000000000100000
........................................................................................TTGTTTTGCTGTCGAGCCT--TCCAGA...........................................................................................................................................................25201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000005007000000000000000000301000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000001000
.............................................................TA----TCACCGAGAAATTGCGCA.........................................................................................................................................................................................20201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000018000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCCT--.................................................................................................................................................................24201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000010000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000011000000701000000000000000000000000
.....TCACATATTAAAGAATTTAAG....................................................................................................................................................................................................................................................21201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000200
...................................................................TCACCGAGAAATTGCGCAGTGT.....................................................................................................................................................................................22201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000001000000001012000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000
.............................................................................................TTGCTGTCGAGCCT--TCCAGAGAG........................................................................................................................................................23201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000200000000000000000000006100000000000000000000000030000100000000010000100000000000000000000000000000000000000000000000000000000000000000000002100000000000010000000000000
..........................................TTGATGCAGTGGAAATTGG.................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................AGTGGAAATTGGTA----TCACCGA....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................ATTGGTA----TCACCGAGAAATTGCG...........................................................................................................................................................................................23201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000100000000000000000000000000100000000200000000100000000000002000000000020000000000000000000000000000001400000000120000000010000000000000000
.................................................................................................TGTCGAGCCT--TCCAGAGAG........................................................................................................................................................19201.00200000000000000000000000000010000000000000000000000000000000000000000000000000000000000002000000000000000010000000100000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000430
droSim2
TATCGTCACATATTAAAGAATTTAAGGAAATCTTTGATGCCCTTGATGCGGTGGAAATTGGTA----TCACCGAGAAATTGCGCAGTGTTGTTTTGCTGTCGAGCCT--TCCAGAGAGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................TTTGATGCCCTTGATGCGGTGGAAAT....................................................................................................................................................................................................................26138.0038000030011033000000
..................................TGATGCCCTTGATGCGGTGGAAAT....................................................................................................................................................................................................................24130.00300000120020016000000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCCT--.................................................................................................................................................................24420.008001021200038126000000
.....TCACATATTAAAGAATTTAAGGAA.................................................................................................................................................................................................................................................24112.001200006004010010000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCCT--TC...............................................................................................................................................................26411.7547000000142031000000
......................TAAGGAAATCTTTGATGCCCTTGATGCGGT..........................................................................................................................................................................................................................3019.00900000044100000000
TATCGTCACATATTAAAGAAT.........................................................................................................................................................................................................................................................2119.00900000040410000000
.....TCACATATTAAAGAATTTAAGGAAA................................................................................................................................................................................................................................................2518.00800000003020021000
TATCGTCACATATTAAAGA...........................................................................................................................................................................................................................................................1917.00700000050200000000
TATCGTCACATATTAAAGAATTTAAGGA..................................................................................................................................................................................................................................................2817.00700000031300000000
..............................TCTTTGATGCCCTTGATGCGGTGGA.......................................................................................................................................................................................................................2516.00600020022000000000
.....................................TGCCCTTGATGCGGTGGAAATTGGT................................................................................................................................................................................................................2516.00600010003101000000
.....TCACATATTAAAGAATTTAAGGA..................................................................................................................................................................................................................................................2315.00500000002030000000
......................TAAGGAAATCTTTGATGCCCTTGATGCGG...........................................................................................................................................................................................................................2915.00500000032000000000
.................................TTGATGCCCTTGATGCGGTGGAAAT....................................................................................................................................................................................................................2515.00500000000005000000
.....................................TGCCCTTGATGCGGTGGAAATTGGTA----...........................................................................................................................................................................................................2615.00500000012101000000
.....................TTAAGGAAATCTTTGATGCCCTTGA................................................................................................................................................................................................................................2515.00500000010400000000
......................................GCCCTTGATGCGGTGGAAAT....................................................................................................................................................................................................................2015.00500000000005000000
.....TCACATATTAAAGAATT........................................................................................................................................................................................................................................................1714.00400000000004000000
..........................................................TGGTA----TCACCGAGAAATTGCG...........................................................................................................................................................................................2123.50700000002014000000
.....TCACATATTAAAGAATTTAAGGAAAT...............................................................................................................................................................................................................................................2613.00300000003000000000
.....TCACATATTAAAGAATTT.......................................................................................................................................................................................................................................................1813.00300003000000000000
.....................................TGCCCTTGATGCGGTGGA.......................................................................................................................................................................................................................1813.00300000300000000000
...................................GATGCCCTTGATGCGGTGGA.......................................................................................................................................................................................................................2013.00300003000000000000
..............................TCTTTGATGCCCTTGATGCG............................................................................................................................................................................................................................2013.00300000300000000000
........................AGGAAATCTTTGATGCCCTTGATGCGGT..........................................................................................................................................................................................................................2813.00300000020000010000
.....TCACATATTAAAGAATTTAAGGAAATT..............................................................................................................................................................................................................................................2713.00300000003000000000
.....................................TGCCCTTGATGCGGTGGAAATTGG.................................................................................................................................................................................................................2413.00300010001001000000
.....TCACATATTAAAGAATTTAAGGAAATC..............................................................................................................................................................................................................................................2713.00300000000012000000
.........................................................TTGGTA----TCACCGAGAAATTGCGCAGT.......................................................................................................................................................................................2622.50500000040100000000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCC....................................................................................................................................................................2342.25900010004004000000
...................................GATGCCCTTGATGCGGTGGAAATTGG.................................................................................................................................................................................................................2612.00200000000002000000
...........................AAATCTTTGATGCCCTTGATGCGGT..........................................................................................................................................................................................................................2512.00200000001001000000
...................................................TGGAAATTGGTA----TCACCGAGAAATTGCGC..........................................................................................................................................................................................2922.00400000030100000000
..............................TCTTTGATGCCCTTGATGCGGTGGAAAT....................................................................................................................................................................................................................2812.00200000001100000000
TATCGTCACATATTAAAGAATA........................................................................................................................................................................................................................................................2212.00200000010100000000
.................................................GGTGGAAATTGGTA----TCACCGAGAA.................................................................................................................................................................................................2412.00200000200000000000
.......ACATATTAAAGAATTTAAGGAAATCT.............................................................................................................................................................................................................................................2612.00200000000000020000
TATCGTCACATATTAAAGAATT........................................................................................................................................................................................................................................................2212.00200000020000000000
.....................TTAAGGAAATCTTTGATGCCCTTGATGCGGT..........................................................................................................................................................................................................................3112.00200000020000000000
..........TATTAAAGAATTTAAGGAAATCT.............................................................................................................................................................................................................................................2312.00200000001000010000
......................TAAGGAAATCTTTGATGCCCT...................................................................................................................................................................................................................................2112.00200200000000000000
..............................TCTTTGATGCCCTTGATGCGGTGGAAA.....................................................................................................................................................................................................................2712.00200010000001000000
................................TTTGATGCCCTTGATGCGGTGGA.......................................................................................................................................................................................................................2312.00200000001001000000
.....................TTAAGGAAATCTTTGATGCCC....................................................................................................................................................................................................................................2112.00200000000101000000
.............................ATCTTTGATGCCCTTGATGCGGTGGA.......................................................................................................................................................................................................................2612.00200000002000000000
.....................TTAAGGAAATCTTTGATGCC.....................................................................................................................................................................................................................................2012.00200000010010000000
..........TATTAAAGAATTTAAGGAAATCTT............................................................................................................................................................................................................................................2412.00200000000011000000
...........................................TGATGCGGTGGAAATTGGTA----T..........................................................................................................................................................................................................2112.00200000000000002000
.........................................................TTGGTA----TCACCGAGAAATTGCG...........................................................................................................................................................................................2221.50300000002010000000
............................................................................................TTTGCTGTCGAGCCT--TCCAGAGAGT.......................................................................................................................................................2541.50600000002211000000
.......................................................................................GTTGTTTTGCTGTCGAGCCT--T................................................................................................................................................................2141.25500000032000000000
............................................................................................TTTGCTGTCGAGCCT--TCCAGAGAGTT......................................................................................................................................................2641.25500000021010010000
.......................................................................CGAGAAATTGCGCAGTGTTGTTTT...............................................................................................................................................................................2441.25500000040100000000
................................TTTGATGCCCTTGATGCGGTGGAAA.....................................................................................................................................................................................................................2511.00100000000001000000
TATCGTCACATATTAAAGAT..........................................................................................................................................................................................................................................................2011.00100000000100000000
..............AAAGAATTTAAGGAAATCTTT...........................................................................................................................................................................................................................................2111.00100000000001000000
................................TTTGATGCCCTTGATGCGGTGGAA......................................................................................................................................................................................................................2411.00100000000001000000
..........................................TTGATGCGGTGGAAATTGGTA----TCAC.......................................................................................................................................................................................................2511.00100000000000001000
.......................................................AATTGGTA----TCACCGAGAAA................................................................................................................................................................................................1921.00200002000000000000
.........................................CTTGATGCGGTGGAAAT....................................................................................................................................................................................................................1711.00100000000001000000
.................GAATTTAAGGAAATCTTTGATGC......................................................................................................................................................................................................................................2311.00100000000001000000
...CGTCACATATTAAAGAATTTAAGGA..................................................................................................................................................................................................................................................2511.00100000010000000000
......................................GCCCTTGATGCGGTGGAAA.....................................................................................................................................................................................................................1911.00100000000001000000
..............................................TGCGGTGGAAATTGGTA----TCAC.......................................................................................................................................................................................................2111.00100000010000000000
.............................................................TA----TCACCGAGAAATTGCGCAGTGTT....................................................................................................................................................................................2521.00200000010001000000
...................................GATGCCCTTGATGCGGTGGAAATTGGTA----...........................................................................................................................................................................................................2811.00100000001000000000
..............................................TGCGGTGGAAATTGGTA----TCACT......................................................................................................................................................................................................2211.00100000000000001000
TATCGTCACATATTAAAGAAA.........................................................................................................................................................................................................................................................2111.00100000000100000000
..............................................TGCGGTGGAAATTGGTA----TCA........................................................................................................................................................................................................2011.00100000010000000000
.......ACATATTAAAGAATTTAAGGAAATCA.............................................................................................................................................................................................................................................2611.00100000000000010000
..............................TCTTTGATGCCCTTGATGCGGT..........................................................................................................................................................................................................................2211.00100000000001000000
..........................................................TGGTA----TCACCGAGAAATTGCGCAGTGT.....................................................................................................................................................................................2721.00200010000001000000
..............................................................A----TCACCGAGAAATTGCG...........................................................................................................................................................................................1731.00300000000003000000
..............................................TGCGGTGGAAATTGGTA----TCACCGAGA..................................................................................................................................................................................................2611.00100000010000000000
............TTAAAGAATTTAAGGAAATCTTTGA.........................................................................................................................................................................................................................................2511.00100000000100000000
TATCGTCACATATTAAAGAATTTAAGGAA.................................................................................................................................................................................................................................................2911.00100000000100000000
.....................................TGCCCTTGATGCGGTGGAAATTGGA................................................................................................................................................................................................................2511.00100000000001000000
...........ATTAAAGAATTTAAGG...................................................................................................................................................................................................................................................1611.00100000010000000000
.............TAAAGAATTTAAGGAAATCTTTGATGCC.....................................................................................................................................................................................................................................2811.00100000010000000000
.....................TTAAGGAAATCTTTGATGCCCTTGATGCGG...........................................................................................................................................................................................................................3011.00100000010000000000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCCC--.................................................................................................................................................................2441.00402200000000000000
........................AGGAAATCTTTGATGCCCTTGATGCGG...........................................................................................................................................................................................................................2711.00100000000000010000
TATCGTCACATATTAAAGAA..........................................................................................................................................................................................................................................................2011.00100000010000000000
......................................GCCCTTGATGCGGTGGAA......................................................................................................................................................................................................................1811.00100000000001000000
.............................................................................................TTGCTGTCGAGCCT--TCCAGAGAGTT......................................................................................................................................................2541.00400000001101010000
........................................CCTTGATGCGGTGGAAAT....................................................................................................................................................................................................................1811.00100000000001000000
......................................GCCCTTGATGCGGTGGAAATTGGTA----TC.........................................................................................................................................................................................................2711.00100000000001000000
.......ACATATTAAAGAATTTAAGGAAATCTT............................................................................................................................................................................................................................................2711.00100000000100000000
......................................................................................TGTTGTTTTGCTGTCGAGCCT--TCCAGA...........................................................................................................................................................2741.00401000010110000000
...................................GATGCCCTTGATGCGGTGGAAAT....................................................................................................................................................................................................................2311.00100000000001000000
..................................TGATGCCCTTGATGCGGTGGAAA.....................................................................................................................................................................................................................2311.00100000000001000000
...........................................TGATGCGGTGGAAATTGGTT----...........................................................................................................................................................................................................2011.00100000000000001000
.......................AAGGAAATCTTTGATGCCCTTGATGCGG...........................................................................................................................................................................................................................2811.00100000010000000000
..............................TCTTTGATGCCCTTGATGCGT...........................................................................................................................................................................................................................2111.00100000000001000000
....................................................................................AGTGTTGTTTTGCTGTCGAGC.....................................................................................................................................................................2140.75300000021000000000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCCG--.................................................................................................................................................................2440.75303000000000000000
...................................................................................CAGTGTTGTTTTGCTGTCGAGC.....................................................................................................................................................................2240.75300000003000000000
..............................................................................TTGCGCAGTGTTGTTTTGCTG...........................................................................................................................................................................2140.75302000000001000000
.........................................................................................TGTTTTGCTGTCGAGCCT--.................................................................................................................................................................1840.50200200000000000000
.........................................................................................TGTTTTGCTGTCGAGCCT--TCCAGA...........................................................................................................................................................2440.50200000000200000000
...............................................................................TGCGCAGTGTTGTTTTGCTGTCGAGCCT--.................................................................................................................................................................2840.50200010000100000000
.......................................................................CGAGAAATTGCGCAGTGTTGTTTTG..............................................................................................................................................................................2540.50200000020000000000
.............................................................TA----TCACCGAGAAATTGCGCA.........................................................................................................................................................................................2020.50100000000001000000
....................................................................CACCGAGAAATTGCGCAGTGTTGTTT................................................................................................................................................................................2620.50100000000000010000
....GTCACATATTAAAGA...........................................................................................................................................................................................................................................................1520.50100000010000000000
...................................................TGGAAATTGGTA----TCACCGAGAAATTG.............................................................................................................................................................................................2620.50100000001000000000
..........................................................TGGTA----TCACCGAGAAATTGCGCAGTGTT....................................................................................................................................................................................2820.50100000010000000000
.......................................................................CGAGAAATTGCGCAGTGTTGTTT................................................................................................................................................................................2340.50200000020000000000
............................................................GTA----TCACCGAGAAATTGCGC..........................................................................................................................................................................................2020.50100000000000001000
............................................................................................TTTGCTGTCGAGCCT--TCCAGAGA.........................................................................................................................................................2340.50200000000200000000
...................................................................TCACCGAGAAATTGCGCAGTGTTGT..................................................................................................................................................................................2520.50100000000001000000
.........................................................................................TGTTTTGCTGTCGAGCCT--TCCAGAGAG........................................................................................................................................................2740.50200000010100000000
............................................................................AATTGCGCAGTGTTGTTTTGCTGT..........................................................................................................................................................................2440.50200000000002000000
....................................................................CACCGAGAAATTGCGCAGTGTTGT..................................................................................................................................................................................2420.50100000000001000000
..........................................................TGGTA----TCACCGAGAAATTGCGCAGT.......................................................................................................................................................................................2520.50100000010000000000
...................................................TGGAAATTGGTA----TCACCGAGAAATT..............................................................................................................................................................................................2520.50100000000100000000
...................ATTTAAGGAAATCTT............................................................................................................................................................................................................................................1520.50100000000001000000
......................................................................................TGTTGTTTTGCTGTCGAGCCT--.................................................................................................................................................................2140.50200200000000000000
...................................................................TCACCGAGAAATTGCGC..........................................................................................................................................................................................1730.33100000000001000000
..............................................................................................TGCTGTCGAGCCT--TCCAGAGAGTT......................................................................................................................................................2440.25100000000100000000
....................................................................................................CGAGCCT--TCCAGAGAG........................................................................................................................................................1640.25100000000001000000
......................................................................................TGTTGTTTTGCTGTCGAGCCT--TCCAG............................................................................................................................................................2640.25100000010000000000
...............................................................................................GCTGTCGAGCCT--TCCAGAGAG........................................................................................................................................................2140.25100000000001000000
.......................................................................CGAGAAATTGCGCAGTGTTGTTTTGC.............................................................................................................................................................................2640.25100000010000000000
...................................................................................CAGTGTTGTTTTGCTG...........................................................................................................................................................................1640.25100000000001000000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCCT--TCT..............................................................................................................................................................2740.25100000001000000000
......................................................................................TGTTGTTTTGCTGTCGAGCCT--T................................................................................................................................................................2240.25100000000100000000
............................................................................................TTTGCTGTCGAGCCT--TCCAGAGAGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------2740.25100000010000000000
.............................................................................................TTGCTGTCGAGCCT--TCCAGAGAGT.......................................................................................................................................................2440.25100000000010000000
.................................................................................................TGTCGAGCCT--TCCAGAGAGTT......................................................................................................................................................2140.25100000001000000000
......................................................................................TGTTGTTTTGCTGTCGAGC.....................................................................................................................................................................1940.25100000001000000000
.................................................................................................TGTCGAGCCT--TCCAGAGA.........................................................................................................................................................1840.25100000000100000000
.............................................................................................TTGCTGTCGAGCCT--TCCAGAGAGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------2640.25100000000000001000
...............................................................................TGCGCAGTGTTGTTTTGCTGTC.........................................................................................................................................................................2240.25100000000001000000
....................................................................................AGTGTTGTTTTGCTGTCGAGCCT--T................................................................................................................................................................2440.25100000000000010000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCCT--TCC..............................................................................................................................................................2740.25100000001000000000
....................................................................................AGTGTTGTTTTGCTGTCGAGCCT--TC...............................................................................................................................................................2540.25100000000100000000
...........................................................................................TTTTGCTGTCGAGCCT--TCCAGAGAGT.......................................................................................................................................................2640.25110000000000000000
.......................................................................................GTTGTTTTGCTGTCGAGCCT--TC...............................................................................................................................................................2240.25100000010000000000
...................................................................................CAGTGTTGTTTTGCTGTCGAGCCT--T................................................................................................................................................................2540.25100000000001000000
.......................................................................................GTTGTTTTGCTGTCGAGCC....................................................................................................................................................................1940.25100000000001000000
.....................................................................................GTGTTGTTTTGCTGTCGAGCCT--TA...............................................................................................................................................................2440.25100000000001000000
droSec2
TATCGTCACATATTAAAGAATTTAAGGAAATCTTTGATGCCCTTGATGCGGTGGAAATTGGTA----TCACCGAGAAATTGCGCAGTGTTGTATTGCTGTTCGACCCTATCCAGAGAGTTTCGAGATATTCCGTT---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...CGTCACATATTAAAGAATTTAAGGA..................................................................................................................................................................................................................................................25200.1532001
...........................................TGATGCGGTGGAAATTGGTA----T..........................................................................................................................................................................................................21200.0510100
..............................TCTTTGATGCCCTTGATGCGGTGGA.......................................................................................................................................................................................................................25200.0510010
...CGTCACATATTAAAGAATTTAAGGAA.................................................................................................................................................................................................................................................26200.0511000
..............................TCTTTGATGCCCTTGATGCGGTGGAAA.....................................................................................................................................................................................................................27200.0511000
..............................TCTTTGATGCCCTTGATGCGGTGG........................................................................................................................................................................................................................24200.0511000
......................................GCCCTTGATGCGGTGGAAATTGGT................................................................................................................................................................................................................24200.0510010
..........................................................TGGTA----TCACCGAGAAATTGCGCAGTG......................................................................................................................................................................................26200.0510010
..........................................TTGATGCGGTGGAAATTGGTA----...........................................................................................................................................................................................................21200.0510100
...........................................TGATGCGGTGGAAATTGGTA----TCACCGA....................................................................................................................................................................................................27200.0510010
...................................................TGGAAATTGGTA----TCACCGAGAAATTG.............................................................................................................................................................................................26200.0511000
...CGTCACATATTAAAGAATTTAAGG...................................................................................................................................................................................................................................................24200.0511000
.............................ATCTTTGATGCCCTTGATGCGGTGGA.......................................................................................................................................................................................................................26200.0510001
.............................................ATGCGGTGGAAATTGGTA----TC.........................................................................................................................................................................................................20200.0510100
...........................................TGATGCGGTGGAAATTGGTA----TT.........................................................................................................................................................................................................22200.0510100
..........................................................TGGTA----TCACCGAGAAATTGCGCAGTGT.....................................................................................................................................................................................27200.0510010
droYak3
TGTCGACATACATAAGCGAGTTTGTGGAAATTCTGGATGGTCTAGCTGGAGTTGGAATAGAGC----TAAACGATGAGTTACGAACTATCGTTTTGCTGTCGAGTCT--TCCAGAACAATTC----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
TGTCGACATACATAAGCGAGTTTGTG....................................................................................................................................................................................................................................................2681.6313000000000013
................................CTGGATGGTCTAGCTGGAGT..........................................................................................................................................................................................................................2071.571102000090000
..TCGACATACATAAGCGAGTTTGTGG...................................................................................................................................................................................................................................................2591.00909000000000
............................AATTCTGGATGGTCTAGCTGGA............................................................................................................................................................................................................................2270.86600000060000
........TACATAAGCGAGTTTGTGGA..................................................................................................................................................................................................................................................20100.60601000000005
..TCGACATACATAAGCGAGTTTGTG....................................................................................................................................................................................................................................................2490.56503200000000
..............................TTCTGGATGGTCTAGCTGGAGTTGG.......................................................................................................................................................................................................................2540.50200020000000
.......................................................AATAGAGC----TAAACGATGAGT...............................................................................................................................................................................................20100.50500000050000
..TCGACATACATAAGCGAGTTTGTGGA..................................................................................................................................................................................................................................................2690.44403000010000
.............................ATTCTGGATGGTCTAGCTGGAGT..........................................................................................................................................................................................................................2370.43300000030000
................................CTGGATGGTCTAGCTGGAGTT.........................................................................................................................................................................................................................2170.43301000020000
...........................AAATTCTGGATGGTCTAGCTGG.............................................................................................................................................................................................................................2270.43301000020000
...................GTTTGTGGAAATTCTGGATGGTCT...................................................................................................................................................................................................................................2470.43310000020000
...................GTTTGTGGAAATTCTGGATGGT.....................................................................................................................................................................................................................................2270.29200000020000
...........................AAATTCTGGATGGTCTAGCTGGA............................................................................................................................................................................................................................2370.29200000020000
...................GTTTGTGGAAATTCTGGATG.......................................................................................................................................................................................................................................2070.29200000020000
..........................GAAATTCTGGATGGTCTAGCTGGAGT..........................................................................................................................................................................................................................2670.29202000000000
.............................ATTCTGGATGGTCTAGCTGG.............................................................................................................................................................................................................................2070.29200000020000
.................GAGTTTGTGGAAATTCTGGATGGT.....................................................................................................................................................................................................................................2470.29200000020000
...............................TCTGGATGGTCTAGCTGGAGTT.........................................................................................................................................................................................................................2270.29200000020000
..........................GAAATTCTGGATGGTCTAGCTGGA............................................................................................................................................................................................................................2470.29201000010000
.........................................................................ATGAGTTACGAACTATCGTT.................................................................................................................................................................................20110.27303000000000
...............................TCTGGATGGTCTAGCTGGAGTTGGA......................................................................................................................................................................................................................2540.25100100000000
...............................TCTGGATGGTCTAGCTGGAGTTGGAA.....................................................................................................................................................................................................................2640.25100100000000
...........................................AGCTGGAGTTGGAATAGAGC----TAAACGA....................................................................................................................................................................................................2750.20101000000000
........................................TCTAGCTGGAGTTGGAATAGA.................................................................................................................................................................................................................2170.14101000000000
............TAAGCGAGTTTGTGGAAATTCTGGATG.......................................................................................................................................................................................................................................2770.14101000000000
...................GTTTGTGGAAATTCTGGA.........................................................................................................................................................................................................................................1870.14110000000000
................................CTGGATGGTCTAGCTGGA............................................................................................................................................................................................................................1870.14100000010000
..............................TTCTGGATGGTCTAGCTGGA............................................................................................................................................................................................................................2070.14100000010000
................................CTGGATGGTCTAGCTGGAGTTG........................................................................................................................................................................................................................2270.14100000010000
..........................GAAATTCTGGATGGTCTAGCTGG.............................................................................................................................................................................................................................2370.14100000010000
................................CTGGATGGTCTAGCTGGAGC..........................................................................................................................................................................................................................2070.14100000010000
..............AGCGAGTTTGTGGAAATTCTGGATGGTC....................................................................................................................................................................................................................................2870.14100000010000
..............................TTCTGGATGGTCTAGCTGGAGTTG........................................................................................................................................................................................................................2470.14100010000000
..............................TTCTGGATGGTCTAGCTGGAG...........................................................................................................................................................................................................................2170.14100000010000
...............GCGAGTTTGTGGAAATTCTGGATGGT.....................................................................................................................................................................................................................................2670.14100000010000
...............................TCTGGATGGTCTAGCTGGA............................................................................................................................................................................................................................1970.14100000010000
............................AATTCTGGATGGTCTAGCTGGAGT..........................................................................................................................................................................................................................2470.14101000000000
..................AGTTTGTGGAAATTCTGGATGGTCTA..................................................................................................................................................................................................................................2670.14100000100000
..........................GAAATTCTGGATGGTCTAGCT...............................................................................................................................................................................................................................2170.14110000000000
...................GTTTGTGGAAATTCTGGAT........................................................................................................................................................................................................................................1970.14100000010000
TGTCGACATACATAAGCGAGTTTGTGGA..................................................................................................................................................................................................................................................2880.13101000000000
.....................TTGTGGAAATTCTGGATGGT.....................................................................................................................................................................................................................................2090.11100000010000
....................TTTGTGGAAATTCTGGATGGT.....................................................................................................................................................................................................................................2190.11100000010000
..........CATAAGCGAGTTTGTGGAAATTCT............................................................................................................................................................................................................................................2490.11100000010000
.......ATACATAAGCGAGTTTGTGGAAATTCTG...........................................................................................................................................................................................................................................2890.11101000000000
....GACATACATAAGCGAGTTTGTGG...................................................................................................................................................................................................................................................2390.11101000000000
...CGACATACATAAGCGAGTTTGTG....................................................................................................................................................................................................................................................2390.11101000000000
.GTCGACATACATAAGCGAGTTTGT.....................................................................................................................................................................................................................................................2490.11100000010000
....GACATACATAAGCGAGTTTGTGGAAATT..............................................................................................................................................................................................................................................2890.11100000010000
..........CATAAGCGAGTTTGTGGAAATTC.............................................................................................................................................................................................................................................2390.11101000000000
..TCGACATACATAAGCGAGTTTGT.....................................................................................................................................................................................................................................................2390.11100000010000
........................................................................GATGAGTTACGAACTATCGTTTTGCT............................................................................................................................................................................26100.10100000010000
........................................................ATAGAGC----TAAACGATGAGT...............................................................................................................................................................................................19100.10100000010000
............................................................AGC----TAAACGATGAGTTACGAACTA......................................................................................................................................................................................24100.10101000000000
.......................................................................CGATGAGTTACGAACTATCGTTTTGC.............................................................................................................................................................................26100.10100100000000
........TACATAAGCGAGTTTGTGGAAATT..............................................................................................................................................................................................................................................24100.10101000000000
...............................................................................TACGAACTATCGTTTTGCTGTC.........................................................................................................................................................................22100.10101000000000
..........................................................................TGAGTTACGAACTATCGTTTTGCT............................................................................................................................................................................24100.10101000000000
..........................................................................TGAGTTACGAACTATCGTTTTGCTGT..........................................................................................................................................................................26100.10101000000000
.........ACATAAGCGAGTTTGTGGA..................................................................................................................................................................................................................................................19100.10100000010000
..........................................................................TGAGTTACGAACTATCGTTTTGC.............................................................................................................................................................................23100.10101000000000
.......................................................AATAGAGC----TAAACGATGAGTTACGAACT.......................................................................................................................................................................................28100.10100000010000
.............................................................GC----TAAACGATGAGTTACGAACT.......................................................................................................................................................................................22100.10100000010000
...........................................................................GAGTTACGAACTATCGTTTTGCTGT..........................................................................................................................................................................25100.10101000000000
.........................................................................ATGAGTTACGAACTATCGTTT................................................................................................................................................................................21100.10100000010000
.................................TGGATGGTCTAGCTGGATCG.........................................................................................................................................................................................................................20120.08100000100000
droEre2
CTTCCAGTCACCTGAATGCTTTCAGTGAGTTTTTGGATCAACTATCGTCGGTGGCAATTGACATATGTAAGTGAGGAGCTTCAATCCATAATCCTGCTATCGAGTCT--TCCCAAGGACTACTAAATT-TTT------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:07 PM