ID:

dmo_810

 Coordinate:

scaffold_6473:16647808-16647958 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.6 -11.2 -11.0 -10.8

Flybase annnotation

CDS [Dmoj\GI15997-cds]; exon [dmoj_GLEANR_16695:3]; intron [Dmoj\GI15997-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+
mature
star
  1. scaffold_6308:3036007-3036027 +
  2. scaffold_6473:4126427-4126447 +
  3. scaffold_6473:4149825-4149845 +
  4. scaffold_6473:9871732-9871752 +
  5. scaffold_6473:14547860-14547880 +
  6. dmo_810  scaffold_6473:16647871-16647891 +
  7. scaffold_6496:18496603-18496623 +
  8. scaffold_6496:23309649-23309669 +
  9. scaffold_6496:24770227-24770247 +
  10. scaffold_6500:14407229-14407249 +
  11. scaffold_6540:9102459-9102479 +
  12. scaffold_6540:9905186-9905206 +
  13. scaffold_6540:10995720-10995740 +
  14. scaffold_6540:11139429-11139449 +
  15. scaffold_6540:14213135-14213155 +
  16. scaffold_6540:18359661-18359681 +
  17. scaffold_6680:14350469-14350489 +
  18. scaffold_6680:19132191-19132211 +
  19. scaffold_6680:20712539-20712559 +
  20. scaffold_6680:21970416-21970436 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCAGCCCCAACCCAGCCAACAAGTCCTTAACAATGGCCAGTGAGATGCCCGTCGAGCTGCTGTCACGCGTTCTGGGCATTGAGCCAATAATCAAGGCAACAACTGCAGCACCTGCAACAGCAACAGCAACAGCTGCAGCGACAGCAGCAACAGTTGCAGCTGAAGTGCCGGCAACAGATGCAACAACGAGCACTGTTAATTCCCAATTAGCACCTACCTTCGACATCATTACCTCCACCCAGTATCCCACA
***********************************************************************..........(((...........((......(((((...)))))...))..........)))********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 V056
head
 M046
female body
.......................................................................CTGGGCATTGAGCCAATAATCAAGGCAAC....................................................................................................................................................... 29 0 1 1.00 1 1 0 0
.............................................TGCCCGTGGAGCTACAGTCAC......................................................................................................................................................................................... 21 3 2 0.50 1 0 1 0
.................................................................................................................GCAACAGCAACAGCAACAGCT..................................................................................................................... 21 0 20 0.05 1 0 0 1
........................................................................................................................CAACAGCAACAGCTGCAGC................................................................................................................ 19 0 20 0.05 1 0 0 1

Anti-sense strand reads

GGTCGGGGTTGGGTCGGTTGTTCAGGAATTGTTACCGGTCACTCTACGGGCAGCTCGACGACAGTGCGCAAGACCCGTAACTCGGTTATTAGTTCCGTTGTTGACGTCGTGGACGTTGTCGTTGTCGTTGTCGACGTCGCTGTCGTCGTTGTCAACGTCGACTTCACGGCCGTTGTCTACGTTGTTGCTCGTGACAATTAAGGGTTAATCGTGGATGGAAGCTGTAGTAATGGAGGTGGGTCATAGGGTGT
*********************************************************************************************************************..........(((...........((......(((((...)))))...))..........)))*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V056
head
 V110
male body		 V049
head
..............................................................................................CCGCTGTTGACGTCTTGG........................................................................................................................................... 18 2 2 0.50 1 0 1 0
..............................................................AGTGTGCAGGACCCGTAA........................................................................................................................................................................... 18 2 3 0.33 1 1 0 0
......................................................TCGACGACAGTGTGCAAGTTC................................................................................................................................................................................ 21 3 5 0.20 1 1 0 0
......................................................TCGACGACAGTGTGCAAGGGC................................................................................................................................................................................ 21 3 6 0.17 1 1 0 0
........................................................................................................................................................................................TTGCTAGTGACTATTAAGTG............................................... 20 3 7 0.14 1 0 1 0
......................................................TCGACGACAGTGTGCGTGACC................................................................................................................................................................................ 21 3 9 0.11 1 0 0 1
.......................................................CGGCGACAGTGCGCGGGACC................................................................................................................................................................................ 20 3 11 0.09 1 0 0 1
........................................................GGCGACAGTCTGCAAGACC................................................................................................................................................................................ 19 3 12 0.08 1 1 0 0
GTTCGGGGTAGGGTCGTTTG....................................................................................................................................................................................................................................... 20 3 13 0.08 1 0 1 0
.TTCGGGGTAGGGTCGTTTG....................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:16647758-16648008 + dmo_810 CCAGCCC-------------------------------------------------------------------------------C----AACCCAG-CCAACAAGTCCTTAACAAT---------------GGCCAGTGA-----------------------------------------------------------------------------------------GATGCCCGTCGAGCTGCTGTCACGCGTTCTGGGCATTGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAA---------------------------------------TAATCAAGGCAACAA--------------------------------------------------------CTGCAGCACCTGCAA---CA--------GCAACAGCAACA---GCT---------------GCAGCGACAGCAGCAACAGTT-------------------------------------------------GCAGCTGAAGTGCCGGC------------------------------------------------------------------------------------------A----------------------------------A-----------------------------------CAGATG-----------------------------------------------------------------CAACAACGAGCACTGTTAATTCCCAATTAGCACCTA-------------------------------------------------------------------CC-------------TTCGACATC-----------------------------------ATTACCTCCAC--CC-AGTATCCC--ACA
droVir3 scaffold_12970:8858348-8858574 - CAA-CAA-------------------------------------------------------------------------------C----AATCGCCACC-AAAACA--TTAACAAT---------------GGGG-------------------------------------ACAGA----------------------------------------------------TGTGCCCTTCGAGCTGTTGTCACGATTTCTGGGCACTGAG-----------------------CC----------------------------------------------------AACAAGC-------------G-CA------A------------------------------------------------------------------------------------------CAGCAG----------------------------CAAC-------------------------AAC---------------------------T---G---CA-----ACTG---TT-------------------------------------------------------------------------------------------------GCAACTGAAATGCTAGC------------------------------------------AACA-ACAAGAGAAGTGA------C-----------GA------------------------------------------------------------------------------------GTG-----------------------------------------------------------------TAACAACAACCACTGATAATTCCCAATTAGCACCTACCTCAACA---------------------------------------------------------------------------TTC----------------------------------------ACAACCTCCAC--CC-AGTATCCT--CAA
droGri2 scaffold_15203:11572927-11573200 - ACAGCAG-------------------------------------------------------------------------------C----AACCACTACA-ACAACA-------------------GCAG----CAA----------------------------------CGACAGA----------------------------------------------------GATGCCTTTTCAGCTGTTGTCACGCTTTCTGGGCGACGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACATTGAGCACAGCAACAACAGGAGCAACTGCAG---C------------TTCAA----CTGCTG-------------------CAAT---------------------------------T---GCTGCAATT--GCAA---------CTGCAACGCA---GGCAGCAACAAC---------A------ACAACAACAACAACAG----------------------------------------TTGAAACAC---------------------------------------C----------AA--------------------------------------------------------------------------------------------------------------------GTG-----------------------------------------------------------------TTGAAACAACCACAGATAACTCCCAATTAGCACCTA-------------------------------------------------------------------CCACTATCTCAACC--ATC----------------------------------------ACTACTCTAAC--CCA-GT--ATC--CCA
droWil2 scf2_1100000004768:1490371-1490594 + CCAGCAT-------------------------------------------------------------------------------C----ATCCAAG-CCTGGCGCT-------------------------G------------------------TCTGG-----------------------------------------------------------------------------------------------------------------------------------TCTG--------CCACCCGCTGCTGATGTCGTTGAATTGCATTT--GCAACAGC-------AA----------------------C------------------------------------------------------------------------------------------------------------------A-ACATCAACACC----AGCAACAGCAACACCAGCAGCAACA------------------------------C---C-----------------------------------------------------A------TCAGCAGCAGC----------A-------------------------------------CAGTGGC-------------------------------------------------AGCAA---------------T--AGCCCAAA------------GC---------------------------------------------T----GTT-----AGCCACCAGCGACAGCAGCAACTCCACCTCCTCCTATCAGCAACAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGC----------------------ATC-------------TCAATT--GACCAGCG
dp5 3:11298323-11298575 + dps_1160 CCAGCCA-------------------------------------------------------------------------------C----AAAAAAA-CC-----------CACAGAGAAGCCAAAGTCAAAGCCCAAGCC------------GAAGCCCGT----GCCTCAGTTGGCGGAG------------------------ACCATGAAGCGACCCATCCACCAG----------------------------------------CAGCAGCAACATCAGCTGCAGCAGC-----------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAGCAGCAACA------------------------------T---CA--------ACTGCA---GCAGCAGC---ATCAGCAGCAGCAGC------------A---GCAACTGC------AG----------------------------------------CA---------------------------------------GAAGCAGCAACAGC---A-ACAACAG-----------------------------CAGCAGCAA-----CATAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA---------------------------ACAGCAACAACAG--------CA---GCA-GC--AAC--ATA
droPer2 scaffold_23:834912-835119 - CCAGCCT-------------------------------------------------------------------------------C----AGCCACAGCC-ACAGCC-------------------TTTG----AC-------------------------------------------------------------------------------------------------------------------------------------------------------------TCTG--------CCACAAGCTCCT------------TTGACTCTGC--------CGCAGCC-----------------------GC------------------------------------------------------------------------------------------------------------------A-GCCTCAGCATC----TGCAGCAGCAGCATCTGCAGCAACA------------------------------A---CAACA--GCA---------TCAGCC---GCAGCA---------------GCAGCAGCAACAGCAGCCGC--------CGC--C---------------------------------------------------------------------------GCCG----------------------------------C-----------CGC---------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTCACACTAT--------------------------------------------------------------------------------------------------CAATCATCGACATCATCCTCCTCCAATT-------------CTG-CT--TCC--ACT
droAna3 scaffold_13266:3688172-3688421 - GCAACCT-------------------------------------------------------------------------------C----AACAGCAGCA-ACAAGA-------------------ACAA----GCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TCG--------------------------GTGG---------TGACCTGATGAGCTTCCAGCACATGTGGCCTGCGGC-----------TGGCTTCAGCCAG---------------------------------------TCTCCCCAGCAACAG--------------------------------------------------------CAGCAGCAGCAGCCG---CA--------ACAGCAGCAACA---GGCATCGCA---------------GCAACAACAACAGCAGCAGC--------AGC--A---------------------------------------GCAAC---------------------------------------------------------------------------------CGC---------AAC--AG-----------------GGTCAAGCAAA-----------TC----------------------------------------------------------------------------------------------------------CTAGCGATCCTCA-----CAACTA----------------------------------------------------------TAACAA-----------------TATCGGAAGCATACTCACGA----------------------ATC-------------TCA-TT--GAC--ACA
droBip1 scf7180000396383:60438-60702 + ATACGCCCAT---------------------------------------------------------------GTTTTGA------CCATCAAT------------GGACCCAACACT---------------CGCCT--------------------TCTCATCGAGCATCCTTCGGCGC------------------------------TGTTGTTACCCATCTCTCAT----------------------------------------CAGCAACAACTCCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTC---------------AGCAACAG----CAGCAG----------------------------------------------------CAACAACAG---CA--------ACAGCA---GCAGCAACACG---TGCAACAGCAAC------------A---TCAGCAGCAACAGTTC-------------------------------------------------------------------------------------CAGCAACAAC----ATC--------------------------ACT---TGCAACAGCAACAG-------------------------------GATCAATTGC---------------------------------------------------------AATT-------------------------------------------------------------TCAGCACCAA---------------------------------------------------------------------------------CAGCTGCAGCTTAC-------------------------------CCTACCCGCCG--CCT-AT--ACC--ACA
droKik1 scf7180000302382:685502-685717 - AGAGCCCCTT---------------------------------------------------------------CCGCTATGCACAGC----AGCCACTACA-GCAG-----------C---------------AGCCA--------------------C--------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------GCA-----------------------------------GCAACGTCCTGC----------------------TGCGGCGCTTTCGCCATTGGC-----TCAG---------------------------------------ACTCCACTGCAGCAG--------------------------------------------------------CAGCAGCAGCTACAA---CA--------ACAACAGCAGCAGCA------------------GCAGCTACAGCAGCAGCAGAT-----------------------------------------------------------------------------------------------------------------------------------ACAA--------CAGCAGCAGCAGCA------------------------------------------------------------------------------ACA----------------------A----------------------------------------------------TCTGTTCCC---TGGC---------------------------------------------------------------------GTACCCAGCGCGCACCA--TCA---------------------------------------------------------AC--TC---CAC
droFic1 scf7180000453812:172907-173173 - CCAACCTAGATCCAGCCGATGTTTACCACACGCTG-----------------------------------------------------------------------GGA---------------------------CAGAAGAACACCCAAGCCGAA------------------------------------------------------------------------------------GAG---------------------------CAGCAGCAGCAGCAGCTGGAGAAGCAGCAGCTAAT----------------------------------GCAGCAGC-------AGCAACAG---GTG-CAGCACCAGCAA---------------------------------------------------------------------------TATCAGGAGCAG-----------------------------------------------------------------------------------C---------A---GCA------GC---------------------------------------------------------------------------AACAGCTATATCAACAGCAACAGTATCAGCTGCAATTGGAGAAGCAGCAACTGGAAAAGCAAAAGCATCCATACCAGCAG---------------------------------------------------------CAA----------------------C------------------------TGGAA-----AAGCATCAGCAGCAGCAACAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------------------------------------------------AGC--AGC
droEle1 scf7180000491044:1383237-1383503 - CCAGCAA-------------------------------------------------------------------------------T----GGCAACAATG-GCAACA-------------------ATAC----A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC--GCAACAGC-------AACACCAATCCCCGCCAGCAGCAGCAA------------------------------------------------------------CACTGTGCCCAG---------------CAGCAA---CAGTAGTTGCAA-----------------------------------CAACAA---------------------C-----------------------------AGCA---------GC----------------------------------------------------------------------------------------------------------------------------------------------AAC----AGC--------------------------AAT---AGCAACAGCAACAG-------------------------------CAACAGCAAC---------------------------------------------------------AATAACTGCAATAGCAGCAGCAAAGCCAACAACCAAGTGCCAATACAAGTGCCAAT----------------------------------CCTGAGCGGATCCCCCGGCGGATCCTCCAGTCACATTCCACAC------ATGCCCTACTCCTA-------------------------------------------------------------CCA-CC--ACC--ACC
droRho1 scf7180000779911:490654-490893 - ATAATAG-------------------------------------------------------------------------------C----CACCCACGCA-CCTTCACCTCAACGGA---------------A-------T-----------------------------------------------------------------GCCAAACGG---------------ATGACCTGTCGGCCA----------------------------------------------------------G------TTCATCA------------TCAAACCT------------------------------G-CA------A------------------------------------------------------------------------------------------CAGCAA------------------CA-ACAGCAGCAGC----AGCAACAGCAACAACAGCA-----------------------------------------------------------------------------------------GCAGCAACA---AC----------------------------------------------AGATGCGAACACGGGA----------------------------------------------------GCAA---------------C--GTCGCAAG------------GAG-----CGCAGAGAACGCCGGCA-----------G-----------------------------------CAGCAGCAACAACAGATTC-------------CGGC-------------------------------------------------------------ACACCACCCGCGGCGTCA---------------------------------------------------------------------------TCC----------------------------------------GCCCCCT------CCT-CC--CC---CAC
droBia1 scf7180000302193:851159-851396 - GCAGCAG-------------------------------------------------------------------------------C----AACAGCAGTC-GCAGCA-------------------AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------GCAGCAGC-------AGCAACTG---G-----------------------------------------------------------------C-----T----------------------------------------------------------------CACC----AGCAACTG---------TCGCACCAGCAGCAGCAGGCGTTGC---------A---CCA------GC---------------------------------------------------------------------------AACTGTCGC------------------------------------------------------------------------------------A-CCAACAG---CAGCAGCAGCAG-----CAAC---AACAGCAGCAACAG-------------------------------CAGCAGCAGC---------------------------------------------------------AACACCCGCACTCGCAGCT----------------------------------GAACGGTCCGCATCCGCACTCCCATCCGCATTCGCATC-----CGCATCCGCACGCGGG----------------------------------------------C---CAGC--------------------------------------------AC--AC--GCATTCC--ACA
droTak1 scf7180000415141:5913-6143 - ACGGCTTCAATGTGGCCGATTT---CGGCATGGCCGGATTCGACGGCCTCAACATGACAGCGGCCACAGCATTCCTCGATCTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAC----------------------------------GCTCCAGC-------AGCAACAG---ATG-CA------G------------------------------------------------------------------------------------------CAGATGCAGC---------TGCAGCAG-CA----------GCAGCAGCAG---------CAACACCAGCAGCAACAGCAGAC--------------------------------------------------------------GC------------A---CCA----------------GCA------------------------------------------------------------------------------------GCAGCAGCA-ACTAAGCCAGCAGCAGCTGCAG--------CAGCAACAGCAGCA------------------------------------------------------------------------------ACT----------------------GAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC------AGC--AGC
droEug1 scf7180000409246:185528-185756 + CCAGCAC-------------------------------------------------------------------------------C----A-CCACCGCC-ACACGC-------------------ACAG--------------------------------------------------------------------------------------------------------------------------------------------CATCAGCAACAGCAACTTCAGATGC-----------------------------------------------------------A----------------------G--------------------------------------------------------------------------------------------------------------------------------------------CAACTGCAACAG---------------------------------------CAATT--GCAACTGCA---GCAGCAGC---AGCAGCAACAACAAC------------A---TCAACAGC------AA----------------------------------------TTGCAT---------------------------------------CAGCAACAGC---------------------------------------------------------------------------------------------------------------------------AACAACTTCAGCTAACAGTGGCAGCACCAACATGC-------------------------------ACCACAGCAAGCACC--------------ACCACCCA----------------------------------------------------------CAGCAG-----------------CACCAATAGCGTTGTTGTTA----------------------------------ACTCACT-AC--AGC--ACC
dm3 chr2R:13350422-13350671 + CCCGTAC-------------------------------------------------------------------------------CCACCAGT-ACAGCC-A--ACA--------GTG--------CCAA----TA--------------------------------ATCTGATGGCGCTGCACTACTACCTGAAACATCCCGGTATCCAGCAGATGCCCATCC--------------------------------------------------------------------------------------------------------------------------CACAGCA-----------------------GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------AGC---------------------------A---T---CA---GC--AACAGCA---------------------------GC------------A----------------------------------ACACCACCAGCAGCATCAGCAACAGTTGTTGGCCCAGTCACAGACGCAGCTGAAACAACTGCAGCTTAAG---------------------------------------------------------CAG----------------------C------------------------CTACG-----ATCCAC--------------------------------------------------------------------------------------------------------CAG---------------------------------------------------------------------------------------CACCAGCAGCACATCAGCTA--------------------------------------TCA-TC--ATC--ATC
droSim2 x:17982203-17982441 + A--GCAG-------------------------------------------------------------------------------C----ATTTCAA-CCGAGAAGAACTCGACCAT---------------CATCTTCCC-----------------------------------------------------------------------------------------GCTGCCCATGGAGCTGCTCACGCCCTTCCTGAACACCCAC-----------------------------------------------------------G-----------------CACACTC-------------G-CA------G------------------------------------------------------------------------------------------CAGCTGCAAC---------TGCAACAC-CA----------------------------GCAGCAGCT------------------------------G---CAACA--GCAA---CA------GCA------------------------------------GCA---GC-------------A------------------------------------TCAGCACC-------------------------------------------------AACAA---------------C------------------------------------------------ATCCTGCAGC-----------CCCTGGCACGCCACTCCATCGGCACCAGCACCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------AC------CAGTGACACTCGATGTCGGTG-------------CTG-CA--ACC--ATA
droSec2 scaffold_9:223666-223915 + ACACCCA-------------------------------------------------------------------------------C----AACCGCAGCA-GCCAGA-------------------TCCA----ACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TTG--------------------------CTAG---------TGATCTGATGAGCTTCCAGCATATGTGGCCGGCGCC-----------TGGTTTTAGCCAG---------------------------------------ACTTCACAGCAGCAG--------------------------------------------------------CAGCAGCCACAGCAG---CA--------ACAACAGCAGCA---AGCGACGCA---------------GCAGCAACAACAGCAGCAGC--------AGC--A----------------------------------------------------------------------------------------------ACAA---------------C-----------AGG---------CGC--AA-----------------AATCAGGCAAA-----------CT----------------------------------------------------------------------------------------------------------CAAGTGATCCCCA-----CAACTA----------------------------------------------------------CAACAA-----------------CATCGGCAGCATACTAACGA----------------------ATC-------------TCA-TT--GAC--ACA
droYak3 3L:11316377-11316608 - GCAGATG------------------------------------------------------------------------------------AACCACAGCC-AGCTCG------------------------------------------------------C----GTTTC---AGGCGCT----------------------------------------------------------------------------------------------------------------------------CCAGCAGCACTT------------TAGCCACAAT--------CACGGTC-------------T-CA------G------------------------------------------------------------------------------------------CCTGAGCCAC---------TGCAACGG---------G-CAACC---------GCATCAGCAGCAGCA------------------------------G---CAACA--GCAC---CA------GCC------------------AC------------A---TCA----------------GCA------------------------------------------------------------------------------------GCAGCAGCA-ACAACAGGCGTTGCATCTGCAG--------CAGCAACAGC------------------------------------------------------------------------------AACAACA----------------------T-----------------------------------------------------------TCCAGTAACAT---------------------------------------------------------------------------GGCACAAA--AACGTGATCGTGATCGTGA----------------------------------TCTCTCA-AC----G--TCA
droEre2 scaffold_4784:16069759-16070011 + GCAGCAG-------------------------------------------------------------------------------C----AACCTGTGCA-ACAGCA-------------------GCAG----CA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCTGT----------------------------------------------------GCAACAGC-------AGCAGCAGCCCGTG-CAACAGCAGCAA---------------------------------------------------------------------------CAGCCTGTGCAACAGCAG---CAACAGCCAGTG-----------------------------------CAAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------CTGTGCAACAGCAGCA----------------------------------------------------GCAG---------------C--CTGTGCAAC---AGCAGCAGCAA--------------CCTGTGCA-----------ACAGCAGCAGC------AA-----------------CCTGTG-----------------------------------------------------------------CAACA------GCAGCAAACTGCCCAACAGCAA----------------------------------------------------------------------CCCGTAGCACAACA--ACAGATCCACAA--------------------------------------------TC-AGAGTCCT--CCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCAGCCC-------------------------------------------------------------------------------C----AACCCAG-CCAACAAGTCCTTAACAAT---------------GGCCAGTGA-----------------------------------------------------------------------------------------GATGCCCGTCGAGCTGCTGTCACGCGTTCTGGGCATTGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAA---------------------------------------TAATCAAGGCAACAA--------------------------------------------------------CTGCAGCACCTGCAA---CA--------GCAACAGCAACA---GCT---------------GCAGCGACAGCAGCAACAGTT-------------------------------------------------GCAGCTGAAGTGCCGGC------------------------------------------------------------------------------------------A----------------------------------A-----------------------------------CAGATG-----------------------------------------------------------------CAACAACGAGCACTGTTAATTCCCAATTAGCACCTA-------------------------------------------------------------------CC-------------TTCGACATC-----------------------------------ATTACCTCCAC--CC-AGTATCCC--ACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................CTGGGCATTGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAA---------------------------------------TAATCAAGGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---CA--------GCAACAGCAACA---GCT---------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA---GCT---------------GCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droVir3
CAA-CAA-------------------------------------------------------------------------------C----AATCGCCACC-AAAACA--TTAACAAT---------------GGGG-------------------------------------ACAGA----------------------------------------------------TGTGCCCTTCGAGCTGTTGTCACGATTTCTGGGCACTGAG-----------------------CC----------------------------------------------------AACAAGC-------------G-CA------A------------------------------------------------------------------------------------------CAGCAG----------------------------CAAC-------------------------AAC---------------------------T---G---CA-----ACTG---TT-------------------------------------------------------------------------------------------------GCAACTGAAATGCTAGC------------------------------------------AACA-ACAAGAGAAGTGA------C-----------GA------------------------------------------------------------------------------------GTG-----------------------------------------------------------------TAACAACAACCACTGATAATTCCCAATTAGCACCTACCTCAACA---------------------------------------------------------------------------TTC----------------------------------------ACAACCTCCAC--CC-AGTATCCT--CAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
ACAGCAG-------------------------------------------------------------------------------C----AACCACTACA-ACAACA-------------------GCAG----CAA----------------------------------CGACAGA----------------------------------------------------GATGCCTTTTCAGCTGTTGTCACGCTTTCTGGGCGACGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACATTGAGCACAGCAACAACAGGAGCAACTGCAG---C------------TTCAA----CTGCTG-------------------CAAT---------------------------------T---GCTGCAATT--GCAA---------CTGCAACGCA---GGCAGCAACAAC---------A------ACAACAACAACAACAG----------------------------------------TTGAAACAC---------------------------------------C----------AA--------------------------------------------------------------------------------------------------------------------GTG-----------------------------------------------------------------TTGAAACAACCACAGATAACTCCCAATTAGCACCTA-------------------------------------------------------------------CCACTATCTCAACC--ATC----------------------------------------ACTACTCTAAC--CCA-GT--ATC--CCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CCAGCAT-------------------------------------------------------------------------------C----ATCCAAG-CCTGGCGCT-------------------------G------------------------TCTGG-----------------------------------------------------------------------------------------------------------------------------------TCTG--------CCACCCGCTGCTGATGTCGTTGAATTGCATTT--GCAACAGC-------AA----------------------C------------------------------------------------------------------------------------------------------------------A-ACATCAACACC----AGCAACAGCAACACCAGCAGCAACA------------------------------C---C-----------------------------------------------------A------TCAGCAGCAGC----------A-------------------------------------CAGTGGC-------------------------------------------------AGCAA---------------T--AGCCCAAA------------GC---------------------------------------------T----GTT-----AGCCACCAGCGACAGCAGCAACTCCACCTCCTCCTATCAGCAACAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGC----------------------ATC-------------TCAATT--GACCAGCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------------------C---C-----------------------------------------------------A------TCAGCAGCAGC----------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.40200020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------------C---C-----------------------------------------------------A------TCAGCAGCAGC----------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.17100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACACCAGCAGCAACA------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.08100010
dp5
CCAGCCA-------------------------------------------------------------------------------C----AAAAAAA-CC-----------CACAGAGAAGCCAAAGTCAAAGCCCAAGCC------------GAAGCCCGT----GCCTCAGTTGGCGGAG------------------------ACCATGAAGCGACCCATCCACCAG----------------------------------------CAGCAGCAACATCAGCTGCAGCAGC-----------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAGCAGCAACA------------------------------T---CA--------ACTGCA---GCAGCAGC---ATCAGCAGCAGCAGC------------A---GCAACTGC------AG----------------------------------------CA---------------------------------------GAAGCAGCAACAGC---A-ACAACAG-----------------------------CAGCAGCAA-----CATAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA---------------------------ACAGCAACAACAG--------CA---GCA-GC--AAC--ATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................TCAGCTGCAGCAGC-----------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA---------------------------ACAGCAACAACAG--------CA---GCA-G...........2340.2510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---ATCAGCAGCAGCAGC------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530200100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---ATCAGCAGCAGCAGC------------A---G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000100200
.....................................................................................................................................................................................................................................................................................................AGC-----------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530300000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---GCAGCAGC---ATCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
......................................................................................................................................................................................................................................................................................................GC-----------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---GCAGCAGC---ATCAGCAGCAGCAGC------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---ATCAGCAGCAGCAGC------------A---GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAGC---ATCAGCAGCAGCAGC------------A---G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAG--------CA---GCA-GC--AA......20200.0510000100000
................................................................................................................................................................................................................................................................................................GCAGCAGC-----------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.................................................................................................................................................................................................................................................................................................CAGCAGC-----------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
....................................................................................................................................................................................................................................................................................................CAGC-----------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAGCAGCAACA------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC---A-ACAACAG-----------------------------CAGCAGCA............................................................................................................................................................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---GCAGCAGC---ATCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---ATCAGCAGCAGCAGC------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC------------A---GCAACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---ATCAGCAGCAGCAGC------------A---GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGC---A-ACAACAG-----------------------------CAGCA...............................................................................................................................................................................................................................................................................................................................................24200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC---A-ACAACAG-----------------------------CAGCA...............................................................................................................................................................................................................................................................................................................................................20200.0510000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGC---A-ACAACAG-----------------------------CAGCAGC.............................................................................................................................................................................................................................................................................................................................................23200.0510000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---ATCAGCAGCAGCAGC------------A---G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC---A-ACAACAG-----------------------------CAGC................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC---ATCAGCAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
droPer2
CCAGCCT-------------------------------------------------------------------------------C----AGCCACAGCC-ACAGCC-------------------TTTG----AC-------------------------------------------------------------------------------------------------------------------------------------------------------------TCTG--------CCACAAGCTCCT------------TTGACTCTGC--------CGCAGCC-----------------------GC------------------------------------------------------------------------------------------------------------------A-GCCTCAGCATC----TGCAGCAGCAGCATCTGCAGCAACA------------------------------A---CAACA--GCA---------TCAGCC---GCAGCA---------------GCAGCAGCAACAGCAGCCGC--------CGC--C---------------------------------------------------------------------------GCCG----------------------------------C-----------CGC---------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTCACACTAT--------------------------------------------------------------------------------------------------CAATCATCGACATCATCCTCCTCCAATT-------------CTG-CT--TCC--ACTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................CAAGCTCCT------------TTGACTCTGC--------CGCAGCC-----------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
.......................................................................................................CAGCC-------------------TTTG----AC-------------------------------------------------------------------------------------------------------------------------------------------------------------TCTG--------CCACAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---GCAGCA---------------GCAGCAGCAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.071010000
droAna3
GCAACCT-------------------------------------------------------------------------------C----AACAGCAGCA-ACAAGA-------------------ACAA----GCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TCG--------------------------GTGG---------TGACCTGATGAGCTTCCAGCACATGTGGCCTGCGGC-----------TGGCTTCAGCCAG---------------------------------------TCTCCCCAGCAACAG--------------------------------------------------------CAGCAGCAGCAGCCG---CA--------ACAGCAGCAACA---GGCATCGCA---------------GCAACAACAACAGCAGCAGC--------AGC--A---------------------------------------GCAAC---------------------------------------------------------------------------------CGC---------AAC--AG-----------------GGTCAAGCAAA-----------TC----------------------------------------------------------------------------------------------------------CTAGCGATCCTCA-----CAACTA----------------------------------------------------------TAACAA-----------------TATCGGAAGCATACTCACGA----------------------ATC-------------TCA-TT--GAC--ACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACTCACGA----------------------ATC-------------TCA-............2011.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCG---CA--------ACAGCAGCAACA---GGCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................A-ACAAGA-------------------ACAA----GCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TCG--------------------------GTGG---------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGCACATGTGGCCTGCGGC-----------TGGCTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC--------AGC--A---------------------------------------GCAAC---------------------------------------------------------------------------------CGC---------AAC--AG-----------------G....................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------TC----------------------------------------------------------------------------------------------------------CTAGCGATCCTCA-----CAACTA----------------------------------------------------------T................................................................................................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCA---------------GCAACAACAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................................................................................AACAGCAGCA-ACAAGA-------------------ACAA----GCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TCG--------------------------GT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CA--------ACAGCAGCAACA---GGCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA---GGCATCGCA---------------GCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACA---GGCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCCG---CA--------ACAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------------------CAGCAGCAGCAGCCG---CA--------ACAGCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.131001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAG--------------------------------------------------------CAGCAGCAGCAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.071010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCAGC--------AGC--A---------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGC--------AGC--A---------------------------------------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------GCAACAACAACAGCAGCAGC--------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGC--------AGC--A---------------------------------------GCAAC---------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................24200.051010000
droBip1
ATACGCCCAT---------------------------------------------------------------GTTTTGA------CCATCAAT------------GGACCCAACACT---------------CGCCT--------------------TCTCATCGAGCATCCTTCGGCGC------------------------------TGTTGTTACCCATCTCTCAT----------------------------------------CAGCAACAACTCCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTC---------------AGCAACAG----CAGCAG----------------------------------------------------CAACAACAG---CA--------ACAGCA---GCAGCAACACG---TGCAACAGCAAC------------A---TCAGCAGCAACAGTTC-------------------------------------------------------------------------------------CAGCAACAAC----ATC--------------------------ACT---TGCAACAGCAACAG-------------------------------GATCAATTGC---------------------------------------------------------AATT-------------------------------------------------------------TCAGCACCAA---------------------------------------------------------------------------------CAGCTGCAGCTTAC-------------------------------CCTACCCGCCG--CCT-AT--ACC--ACASizeHit CountTotal NormTotal
No Reads
droKik1
AGAGCCCCTT---------------------------------------------------------------CCGCTATGCACAGC----AGCCACTACA-GCAG-----------C---------------AGCCA--------------------C--------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------GCA-----------------------------------GCAACGTCCTGC----------------------TGCGGCGCTTTCGCCATTGGC-----TCAG---------------------------------------ACTCCACTGCAGCAG--------------------------------------------------------CAGCAGCAGCTACAA---CA--------ACAACAGCAGCAGCA------------------GCAGCTACAGCAGCAGCAGAT-----------------------------------------------------------------------------------------------------------------------------------ACAA--------CAGCAGCAGCAGCA------------------------------------------------------------------------------ACA----------------------A----------------------------------------------------TCTGTTCCC---TGGC---------------------------------------------------------------------GTACCCAGCGCGCACCA--TCA---------------------------------------------------------AC--TC---CACSizeHit CountTotal NormTotal
No Reads
droFic1
CCAACCTAGATCCAGCCGATGTTTACCACACGCTG-----------------------------------------------------------------------GGA---------------------------CAGAAGAACACCCAAGCCGAA------------------------------------------------------------------------------------GAG---------------------------CAGCAGCAGCAGCAGCTGGAGAAGCAGCAGCTAAT----------------------------------GCAGCAGC-------AGCAACAG---GTG-CAGCACCAGCAA---------------------------------------------------------------------------TATCAGGAGCAG-----------------------------------------------------------------------------------C---------A---GCA------GC---------------------------------------------------------------------------AACAGCTATATCAACAGCAACAGTATCAGCTGCAATTGGAGAAGCAGCAACTGGAAAAGCAAAAGCATCCATACCAGCAG---------------------------------------------------------CAA----------------------C------------------------TGGAA-----AAGCATCAGCAGCAGCAACAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------------------------------------------------AGC--AGCSizeHit CountTotal NormTotal
No Reads
droEle1
CCAGCAA-------------------------------------------------------------------------------T----GGCAACAATG-GCAACA-------------------ATAC----A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC--GCAACAGC-------AACACCAATCCCCGCCAGCAGCAGCAA------------------------------------------------------------CACTGTGCCCAG---------------CAGCAA---CAGTAGTTGCAA-----------------------------------CAACAA---------------------C-----------------------------AGCA---------GC----------------------------------------------------------------------------------------------------------------------------------------------AAC----AGC--------------------------AAT---AGCAACAGCAACAG-------------------------------CAACAGCAAC---------------------------------------------------------AATAACTGCAATAGCAGCAGCAAAGCCAACAACCAAGTGCCAATACAAGTGCCAAT----------------------------------CCTGAGCGGATCCCCCGGCGGATCCTCCAGTCACATTCCACAC------ATGCCCTACTCCTA-------------------------------------------------------------CCA-CC--ACC--ACCSizeHit CountTotal NormTotal
No Reads
droRho1
ATAATAG-------------------------------------------------------------------------------C----CACCCACGCA-CCTTCACCTCAACGGA---------------A-------T-----------------------------------------------------------------GCCAAACGG---------------ATGACCTGTCGGCCA----------------------------------------------------------G------TTCATCA------------TCAAACCT------------------------------G-CA------A------------------------------------------------------------------------------------------CAGCAA------------------CA-ACAGCAGCAGC----AGCAACAGCAACAACAGCA-----------------------------------------------------------------------------------------GCAGCAACA---AC----------------------------------------------AGATGCGAACACGGGA----------------------------------------------------GCAA---------------C--GTCGCAAG------------GAG-----CGCAGAGAACGCCGGCA-----------G-----------------------------------CAGCAGCAACAACAGATTC-------------CGGC-------------------------------------------------------------ACACCACCCGCGGCGTCA---------------------------------------------------------------------------TCC----------------------------------------GCCCCCT------CCT-CC--CC---CACSizeHit CountTotal NormTotal
No Reads
droBia1
GCAGCAG-------------------------------------------------------------------------------C----AACAGCAGTC-GCAGCA-------------------AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------GCAGCAGC-------AGCAACTG---G-----------------------------------------------------------------C-----T----------------------------------------------------------------CACC----AGCAACTG---------TCGCACCAGCAGCAGCAGGCGTTGC---------A---CCA------GC---------------------------------------------------------------------------AACTGTCGC------------------------------------------------------------------------------------A-CCAACAG---CAGCAGCAGCAG-----CAAC---AACAGCAGCAACAG-------------------------------CAGCAGCAGC---------------------------------------------------------AACACCCGCACTCGCAGCT----------------------------------GAACGGTCCGCATCCGCACTCCCATCCGCATTCGCATC-----CGCATCCGCACGCGGG----------------------------------------------C---CAGC--------------------------------------------AC--AC--GCATTCC--ACASizeHit CountTotal NormTotal
No Reads
droTak1
ACGGCTTCAATGTGGCCGATTT---CGGCATGGCCGGATTCGACGGCCTCAACATGACAGCGGCCACAGCATTCCTCGATCTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAC----------------------------------GCTCCAGC-------AGCAACAG---ATG-CA------G------------------------------------------------------------------------------------------CAGATGCAGC---------TGCAGCAG-CA----------GCAGCAGCAG---------CAACACCAGCAGCAACAGCAGAC--------------------------------------------------------------GC------------A---CCA----------------GCA------------------------------------------------------------------------------------GCAGCAGCA-ACTAAGCCAGCAGCAGCTGCAG--------CAGCAACAGCAGCA------------------------------------------------------------------------------ACT----------------------GAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC------AGC--AGCSizeHit CountTotal NormTotal
No Reads
droEug1
CCAGCAC-------------------------------------------------------------------------------C----A-CCACCGCC-ACACGC-------------------ACAG--------------------------------------------------------------------------------------------------------------------------------------------CATCAGCAACAGCAACTTCAGATGC-----------------------------------------------------------A----------------------G--------------------------------------------------------------------------------------------------------------------------------------------CAACTGCAACAG---------------------------------------CAATT--GCAACTGCA---GCAGCAGC---AGCAGCAACAACAAC------------A---TCAACAGC------AA----------------------------------------TTGCAT---------------------------------------CAGCAACAGC---------------------------------------------------------------------------------------------------------------------------AACAACTTCAGCTAACAGTGGCAGCACCAACATGC-------------------------------ACCACAGCAAGCACC--------------ACCACCCA----------------------------------------------------------CAGCAG-----------------CACCAATAGCGTTGTTGTTA----------------------------------ACTCACT-AC--AGC--ACCSizeHit CountTotal NormTotal
No Reads
dm3
CCCGTAC-------------------------------------------------------------------------------CCACCAGT-ACAGCC-A--ACA--------GTG--------CCAA----TA--------------------------------ATCTGATGGCGCTGCACTACTACCTGAAACATCCCGGTATCCAGCAGATGCCCATCC--------------------------------------------------------------------------------------------------------------------------CACAGCA-----------------------GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------AGC---------------------------A---T---CA---GC--AACAGCA---------------------------GC------------A----------------------------------ACACCACCAGCAGCATCAGCAACAGTTGTTGGCCCAGTCACAGACGCAGCTGAAACAACTGCAGCTTAAG---------------------------------------------------------CAG----------------------C------------------------CTACG-----ATCCAC--------------------------------------------------------------------------------------------------------CAG---------------------------------------------------------------------------------------CACCAGCAGCACATCAGCTA--------------------------------------TCA-TC--ATC--ATCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGACGCAGCTGAAACAACT.................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAGTTGTTGGCCCAGTCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGCAGCTGAAACAACTGCAGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAGTTGTTGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACG-----ATCCAC--------------------------------------------------------------------------------------------------------CAG---------------------------------------------------------------------------------------CACCAGCAGCACA.............................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................AGATGCCCATCC--------------------------------------------------------------------------------------------------------------------------CACAGCA-----------------------GC------------------------------------------------------------------------------------------------------------------A-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CAA----TA--------------------------------ATCTGATGGCGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA---------------------------GC------------A----------------------------------ACACCACCAGCAGCATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------------------------------CACCAGCAGCACATCAGCTA--------------------------------------TCA-TC--........2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................A--ACA--------GTG--------CCAA----TA--------------------------------ATCTGATGGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------AGC---------------------------A---T---CA---GC--AACAGCA---------------------------GC------------A----------------------------------ACACCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AGT-ACAGCC-A--ACA--------GTG--------CCAA----T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAAACAACTGCAGCTTAAG---------------------------------------------------------CAG----------------------C------------------------CT..........................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTGGCCCAGTCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCCCAGTCACAGACGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGACGCAGCTGAAACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTTGTTGGCCCAGTCACAGACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................CTGAAACATCCCGGTATCCAGCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------------GC------------A----------------------------------ACACCACCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGC-------------------------AGC---------------------------A---T---CA---GC--AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGC-------------------------AGC---------------------------A---T---CA---GC--AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC-------------------------AGC---------------------------A---T---CA---GC--AACAGCA---------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------A---T---CA---GC--AACAGCA---------------------------GC------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-------------------------AGC---------------------------A---T---CA---GC--AACAGCA---------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC-------------------------AGC---------------------------A---T---CA---GC--AACAGCA---------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CAGCA-----------------------GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGCA-----------------------GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------AGC---------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC-------------------------AGC---------------------------A---T---CA---GC--AAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC-------------------------AGC---------------------------A---T---CA---GC--AACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC-------------------------AGC---------------------------A---T---CA---GC--AACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------------------GC------------A----------------------------------ACACCACCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-------------------------AGC---------------------------A---T---CA---GC--AACAGCA---------------------------GC------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC-------------------------AGC---------------------------A---T---CA---GC--AACAGCA---------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---T---CA---GC--AACAGCA---------------------------GC------------A----------------------------------ACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGCA-----------------------GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------AG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGC-------------------------AGC---------------------------A---T---CA---GC--A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------AGC---------------------------A---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CA-----------------------GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------AGC---------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................GCA-----------------------GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------AGC---------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC-------------------------AGC---------------------------A---T---CA---GC--AACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................AGCA-----------------------GC------------------------------------------------------------------------------------------------------------------A-ACATCAGCAGC-------------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
A--GCAG-------------------------------------------------------------------------------C----ATTTCAA-CCGAGAAGAACTCGACCAT---------------CATCTTCCC-----------------------------------------------------------------------------------------GCTGCCCATGGAGCTGCTCACGCCCTTCCTGAACACCCAC-----------------------------------------------------------G-----------------CACACTC-------------G-CA------G------------------------------------------------------------------------------------------CAGCTGCAAC---------TGCAACAC-CA----------------------------GCAGCAGCT------------------------------G---CAACA--GCAA---CA------GCA------------------------------------GCA---GC-------------A------------------------------------TCAGCACC-------------------------------------------------AACAA---------------C------------------------------------------------ATCCTGCAGC-----------CCCTGGCACGCCACTCCATCGGCACCAGCACCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------AC------CAGTGACACTCGATGTCGGTG-------------CTG-CA--ACC--ATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................TCCTGAACACCCAC-----------------------------------------------------------G-----------------CACACTC-------------G-CA------G------------------------------------------------------------------------------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--GCAA---CA------GCA------------------------------------GCA---GC-------------A------------------------------------TC................................................................................................................................................................................................................................................................................................................................................................................................................................................2061.00600006000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT------------------------------G---CAACA--GCAA---CA------GCA------------------------------------GCA---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.80400000400000000000
..........................................................................................................................................................................................................................................GCCCATGGAGCTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
ACACCCA-------------------------------------------------------------------------------C----AACCGCAGCA-GCCAGA-------------------TCCA----ACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TTG--------------------------CTAG---------TGATCTGATGAGCTTCCAGCATATGTGGCCGGCGCC-----------TGGTTTTAGCCAG---------------------------------------ACTTCACAGCAGCAG--------------------------------------------------------CAGCAGCCACAGCAG---CA--------ACAACAGCAGCA---AGCGACGCA---------------GCAGCAACAACAGCAGCAGC--------AGC--A----------------------------------------------------------------------------------------------ACAA---------------C-----------AGG---------CGC--AA-----------------AATCAGGCAAA-----------CT----------------------------------------------------------------------------------------------------------CAAGTGATCCCCA-----CAACTA----------------------------------------------------------CAACAA-----------------CATCGGCAGCATACTAACGA----------------------ATC-------------TCA-TT--GAC--ACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................C--TTG--------------------------CTAG---------TGATCTGATGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................CCA----ACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TTG--------------------------CTAG---------TGATCTGATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGC--------AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040040
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAG---CA--------ACAACAGCAGCA---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGC--------AGC--A----------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................19200.0511000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---CA--------ACAACAGCAGCA---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGC--------AGC--A----------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................23200.0510010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGC--------AGC--A----------------------------------------------------------------------------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
droYak3
GCAGATG------------------------------------------------------------------------------------AACCACAGCC-AGCTCG------------------------------------------------------C----GTTTC---AGGCGCT----------------------------------------------------------------------------------------------------------------------------CCAGCAGCACTT------------TAGCCACAAT--------CACGGTC-------------T-CA------G------------------------------------------------------------------------------------------CCTGAGCCAC---------TGCAACGG---------G-CAACC---------GCATCAGCAGCAGCA------------------------------G---CAACA--GCAC---CA------GCC------------------AC------------A---TCA----------------GCA------------------------------------------------------------------------------------GCAGCAGCA-ACAACAGGCGTTGCATCTGCAG--------CAGCAACAGC------------------------------------------------------------------------------AACAACA----------------------T-----------------------------------------------------------TCCAGTAACAT---------------------------------------------------------------------------GGCACAAA--AACGTGATCGTGATCGTGA----------------------------------TCTCTCA-AC----G--TCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAC---------TGCAACGG---------G-CAACC---------GCATCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACAAA--AACGTGATCGTGATC..........................................................2311.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AACGTGATCGTGATCGTGA----------------------------------TC..................2211.00110000000000
........................................................................................................CTCG------------------------------------------------------C----GTTTC---AGGCGCT----------------------------------------------------------------------------------------------------------------------------CCAGCAGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA------------------------------G---CAACA--GCAC---CA------GCC------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA------------------------------G---CAACA--GCAC---CC------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000100000
droEre2
GCAGCAG-------------------------------------------------------------------------------C----AACCTGTGCA-ACAGCA-------------------GCAG----CA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCTGT----------------------------------------------------GCAACAGC-------AGCAGCAGCCCGTG-CAACAGCAGCAA---------------------------------------------------------------------------CAGCCTGTGCAACAGCAG---CAACAGCCAGTG-----------------------------------CAAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------CTGTGCAACAGCAGCA----------------------------------------------------GCAG---------------C--CTGTGCAAC---AGCAGCAGCAA--------------CCTGTGCA-----------ACAGCAGCAGC------AA-----------------CCTGTG-----------------------------------------------------------------CAACA------GCAGCAAACTGCCCAACAGCAA----------------------------------------------------------------------CCCGTAGCACAACA--ACAGATCCACAA--------------------------------------------TC-AGAGTCCT--CCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................A-ACAGCA-------------------GCAG----CA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020001010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACA--ACAGATCCACAA--------------------------------------------TC-AGAGTC.......2711.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA--ACAGATCCACAA--------------------------------------------TC-AGAGT........2311.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA--ACAGATCCACAA--------------------------------------------TC-AGA..........2211.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................GCAGCCCGTG-CAACAGCAGCAA---------------------------------------------------------------------------CAGCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA--ACAGATCCACAA--------------------------------------------TC-AGA..........2311.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------------------------------------------------------------------CCCGTAGCACAACA--ACAGATCCACAA--------------------------------------------TC-.............3011.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------GCAG---------------C--CTGTGCAAC---AGCAGCA...............................................................................................................................................................................................................................................................................................................................................2211.0010000100
......................................................................................................................................................................................................................................................................................................................................................................AGCAGCCCGTG-CAACAGCAGCAA---------------------------------------------------------------------------CAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------GCAG---------------C--CTGTGCAAC---AGC...................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------------------------------------------------------------------CCCGTAGCACAACA--ACAG....................................................................2011.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAACAGCAG---CAACAGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------GCAG---------------C--CTGTGCAAC---AGCA..................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................................................................................................................................................................CAACAGC-------AGCAGCAGCCCGTG-CAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------------------------------CAACA------GCAGCAAACTGCCCAACAGC................................................................................................................................................................2611.0011000000
......................................................................................................................................................................................................................................................................................................................................................................AGCAGCCCGTG-CAACAGCAGCAA---------------------------------------------------------------------------CAGCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAACAGCAA----------------------------------------------------------------------CCCGTAGCACAACA--........................................................................2611.0011000000
........................................................................................................AGCA-------------------GCAG----CA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCTGT----------------------------------------------------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCCCGTG-CAACAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCCAGTG-----------------------------------CAAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA--------------CCTGTGCA-----------ACAGCAGCAGC------A........................................................................................................................................................................................................................................................................................2420.5011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTG-----------------------------------CAAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------CTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010001000
......................................................................................................................................................................................................................................................................................................................................................AACAGC-------AGCAGCAGCCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCCAGTG-----------------------------------CAAC---------------------------------A---GCA--------------------------------------------------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTG-----------------------------------CAAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------CT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5011000000
......G-------------------------------------------------------------------------------C----AACCTGTGCA-ACAGCA-------------------GCAG----CA----------------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---------------C--CTGTGCAAC---AGCAGCAGCAA--------------C............................................................................................................................................................................................................................................................................................................................2520.5010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCCAGTG-----------------------------------CAAC---------------------------------A---GCA--------------------------------------------------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------AA-----------------CCTGTG-----------------------------------------------------------------CAACA------GCA.................................................................................................................................................................................2030.3311000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------------------------------CAAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------CTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000
...................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAA---------------------------------------------------------------------------CAGCCTGTGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000
...................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAA---------------------------------------------------------------------------CAGCCTGTGCAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3311000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAAC---AGCAGCAGCAA--------------CCTGT........................................................................................................................................................................................................................................................................................................................2330.3311000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC------AA-----------------CCTGTG-----------------------------------------------------------------CAACA------GC..................................................................................................................................................................................2230.3310100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AGCAGCAGCAA--------------CCTGTG.......................................................................................................................................................................................................................................................................................................................2030.3311000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCA-----------ACAGCAGCAGC------AA-----------------CCTGT.................................................................................................................................................................................................................................................................2330.3311000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA--------------CCTGTGCA-----------ACAGC.....................................................................................................................................................................................................................................................................................................2230.3310100000
..................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAA---------------------------------------------------------------------------CAGCCTGTGCAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------ACAGCAGCAGC------AA-----------------CCTGTG-----------------------------------------------------------------...............................................................................................................................................................................................2030.3311000000
....CAG-------------------------------------------------------------------------------C----AACCTGTGCA-ACAGCA-------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3311000000
........................................................................................................................................A----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCTGT----------------------------------------------------GCAACAGC-------AGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------CTGTGCAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310100000
.CAGCAG-------------------------------------------------------------------------------C----AACCTGTGCA-ACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------CTGTGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------ACAGCAGCAGC------AA-----------------CCTGTG-----------------------------------------------------------------CAACA------GC..................................................................................................................................................................................2730.3310001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AGCAGCAGCAA--------------CCTGTGC......................................................................................................................................................................................................................................................................................................................2130.3310000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC----------------------------------------------CTGTGCAACAGCAGCA----------------------------------------------------GCA.....................................................................................................................................................................................................................................................................................................................................................................................2430.3310001000
.......................................................................................................................................................................................................................................................................................ACAGCCTGT----------------------------------------------------GCAACAGC-------AGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA--------------CCTGTGCA-----------ACAGCA....................................................................................................................................................................................................................................................................................................2030.3311000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AGCAGCAGCAA--------------CCTGTGCA-----------ACAGC.....................................................................................................................................................................................................................................................................................................2730.3310001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------ACAGCAGCAGC------AA-----------------CCTGTG-----------------------------------------------------------------C..............................................................................................................................................................................................2130.3310000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------------A---GCA--------------------------------------------------------GCAACAGC----------------------------------------------CTGTGCAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3311000000
...............................................................................................................................................................................................................................................................................................................................................................................TG-CAACAGCAGCAA---------------------------------------------------------------------------CAGCCTGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC----------------------------------------------CTGTGCAACAGCAGCA----------------------------------------------------GC......................................................................................................................................................................................................................................................................................................................................................................................2430.3310000100
..................................................................................................................................G----CA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCTGT----------------------------------------------------GCAACAGC-------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2511000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCAA---------------------------------------------------------------------------CAGCCTGTGCAACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2511000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGC----------------------------------------------CTGTGCAACAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2511000000
...................................................................................................CA-ACAGCA-------------------GCAG----CA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCA----------------------------------------------------GCAG---------------C--CT................................................................................................................................................................................................................................................................................................................................................................1850.2010000010
....................................................................................................A-ACAGCA-------------------GCAG----CA----------------------------------------------------------------------------------------------------------------------------------------------ACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000030
...................................................................................................CA-ACAGCA-------------------GCAG----CA----------------------------------------------------------------------------------------------------------------------------------------------ACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000

Generated: 05/17/2015 at 11:06 PM