ID:

dmo_805

 Coordinate:

scaffold_6473:16249418-16249477 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.1 -3.7

Flybase annnotation

CDS [Dmoj\GI15984-cds]; CDS [Dmoj\GI15984-cds]; exon [dmoj_GLEANR_16681:3]; exon [dmoj_GLEANR_16681:4]; intron [Dmoj\GI15984-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------##################################################
TAGTCGACCAGAAGCGTCAGCTGCGTTTTGAGGACTGGAATGCCCACGACGTGGGTAACAAGTGTTTCTATCTTATATCATGCCCTTCATCTTTCCTCTCTTTCCCGTAGATCGAAACGCTAAACAAGTACTTGTTCTTGACGTCCAAGCCAGTAATCTA
**************************************************..(((((....((((.........))))..))))).........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
 V041
embryo
..............................................................................................................................AGTACTTGTTCTTGACGTCCAAGCCAG....... 27 0 1 90.00 90 86 4 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGACA............................................................................................................. 26 1 1 52.00 52 52 0 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGACG............................................................................................................. 26 0 1 32.00 32 30 0 1 1 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAAGCC......... 25 0 1 20.00 20 15 5 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAAGCCA........ 26 0 1 16.00 16 16 0 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGAC.............................................................................................................. 25 0 1 14.00 14 13 1 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAAGC.......... 24 0 1 13.00 13 9 4 0 0 0
...........................TTGAGGACTGGAATGCCCACGACA............................................................................................................. 24 1 1 12.00 12 12 0 0 0 0
...........................TTGAGGACTGGAATGCCCACGACATC........................................................................................................... 26 2 1 10.00 10 4 6 0 0 0
........................................................................TTATATCATGCCCTTCATCTTTCCTC.............................................................. 26 0 1 8.00 8 6 2 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGA............................................................................................................... 24 0 1 8.00 8 8 0 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAAG........... 23 0 1 7.00 7 4 2 0 1 0
.................................................................TTCTATCTTATATCATGCCCTTCATCT.................................................................... 27 0 1 6.00 6 6 0 0 0 0
...............................................................................................................................GTACTTGTTCTTGACGTCCAAGCCAG....... 26 0 1 6.00 6 6 0 0 0 0
.................................................................TTCTATCTTATATCATGCCCTTCATC..................................................................... 26 0 1 5.00 5 3 2 0 0 0
......................................................................TCTTATATCATGCCCTTCATCTTTCC................................................................ 26 0 1 5.00 5 5 0 0 0 0
..........................TTTGAGGACTGGAATGCCCACGACG............................................................................................................. 25 0 1 5.00 5 5 0 0 0 0
...........................TTGAGGACTGGAATGCCCACGACATCG.......................................................................................................... 27 2 1 5.00 5 4 1 0 0 0
......................................................................TCTTATATCATGCCCTTCATCTTTCCTC.............................................................. 28 0 1 5.00 5 5 0 0 0 0
...................................................TGGGTAAATAGGGTTTCTATC........................................................................................ 21 3 2 4.00 8 2 0 6 0 0
...........................TTGAGGACTGGAATGCCCACGAC.............................................................................................................. 23 0 1 3.00 3 2 1 0 0 0
............................TGAGGACTGGAATGCCCACGACATC........................................................................................................... 25 2 1 3.00 3 2 1 0 0 0
...........................TTGAGGACTGGAATGCCCACGACGTG........................................................................................................... 26 0 1 3.00 3 3 0 0 0 0
...........................TTGAGGACTGGAATGCCCACGACG............................................................................................................. 24 0 1 3.00 3 3 0 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGACAT............................................................................................................ 27 1 1 3.00 3 1 2 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGACGT............................................................................................................ 27 0 1 3.00 3 3 0 0 0 0
.........................................................................TATATCATGCCCTTCATCTTTCCTC.............................................................. 25 0 1 3.00 3 3 0 0 0 0
.........................TTTTGAGGACTGGAATGCCCAC................................................................................................................. 22 0 1 2.00 2 0 2 0 0 0
...........................TTGAGGACTGGAATGCCCACGACGT............................................................................................................ 25 0 1 2.00 2 2 0 0 0 0
..GTCGACCAGAAGCGTCAGCTGC........................................................................................................................................ 22 0 1 2.00 2 0 0 2 0 0
.........................TTTTGAGGACTGGAATGCCCACG................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................AAGTACTTGTTCTTGACGTCCAAGC.......... 25 0 1 2.00 2 2 0 0 0 0
...........................TTGAGGACTGGAATGCCCACGACAT............................................................................................................ 25 1 1 2.00 2 2 0 0 0 0
................TCAGCTGCGTTTTGAGGACTGGAA........................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0
..................................................................TCTATCTTATATCATGCCCTTCATCTT................................................................... 27 0 1 2.00 2 2 0 0 0 0
....CGACCAGAAGCGTCAGCTGCGT...................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
............................TGAGGACTGGAATGCCCACGACA............................................................................................................. 23 1 1 2.00 2 2 0 0 0 0
........................................................................................................................TAAACAAGTACTTGTTCTTGACGTCC.............. 26 0 1 2.00 2 2 0 0 0 0
..........................TTTGAGGACTGGAATGCCCACGA............................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
........CAGAAGCGTCAGCTGCGTTTTGAGGAC............................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCA............. 21 0 1 2.00 2 2 0 0 0 0
.........................TGTTGAGGACTGGAATGCCCACGAC.............................................................................................................. 25 1 1 1.00 1 0 1 0 0 0
.............................................................................................................................CAGTACTTGTTCTTGACGTCCAAGCCAG....... 28 1 1 1.00 1 1 0 0 0 0
.......................................................................CTTATATCATGCCCTTCATCTTTCC................................................................ 25 0 1 1.00 1 1 0 0 0 0
......................................................................TCTTATATCATGCCCTTCATCTTTCCT............................................................... 27 0 1 1.00 1 1 0 0 0 0
......................................................................TCTTATATCATGCCCTTCATCTTT.................................................................. 24 0 1 1.00 1 0 1 0 0 0
...........................TTGAGGACTGGAATGCCCACGACGTGG.......................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTGGAGTGCCCACGACA............................................................................................................. 26 2 1 1.00 1 1 0 0 0 0
..........................TCTGAGGACTGGAATGCCCACGAC.............................................................................................................. 24 1 1 1.00 1 1 0 0 0 0
..........................TTTGAGGACTGGAATGCCCACGACGTG........................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.............................................................................................TCCTCTCTTTCCCGTAGATCGAAACGC........................................ 27 0 1 1.00 1 1 0 0 0 0
......................................................................................................TCCCGTAGATCGAAACGCTAAACA.................................. 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAAGCCAGT...... 28 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................AAGTACTTGTTCTTGACGTCCAAGCA......... 26 1 1 1.00 1 0 1 0 0 0
............................TGAGGACTGGAATGCCCACGACGTGG.......................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
........CAGAAGCGTCAGCTGCGTT..................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................GAGGACTGGAATGCCCACGACGT............................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
................TCAGCTGCGTTTTGAGGACTGGAATGC..................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
..............CGTCAGCTGCGTTTTGAGGACTG........................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
............AGCGTCAGCTGCGTTTTGAGGACTGG.......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................TTTCCCGTAGATCGAAACGCTAAACAAG................................ 28 0 1 1.00 1 1 0 0 0 0
..................AGCTGCGTTTTGAGGACT............................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
.............GCGTCAGCTGCGTTTTGAGGA.............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGACGA............................................................................................................ 27 1 1 1.00 1 0 1 0 0 0
............................................................................................TTCCTCTCTTTCCCGTAGATCGAAACG......................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................GTACTTGTTCTTGACGTCCAAGCC......... 24 0 1 1.00 1 1 0 0 0 0
...........................TTGAGGACTGGAATCCCCACGACATC........................................................................................................... 26 3 1 1.00 1 0 1 0 0 0
.........................................................................TATATCATGCCCTTCATCTTTCCTCC............................................................. 26 1 1 1.00 1 0 1 0 0 0
..............................................................................................................................AGCACTTGTTCTTGACGTCC.............. 20 1 1 1.00 1 0 1 0 0 0
...........................TTGAGGACTGGAATGCCCACGA............................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..........................TTTGAGGACTGGAATGCCCACGAC.............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.......................................................................CTTATATCATGCCCTTCATCTTTCCTC.............................................................. 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCC.............. 20 0 1 1.00 1 1 0 0 0 0
.....................TGCGTTTTGAGGACTGGAATGCCCAC................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
........................GTTTTGAGGACTGGAATGCCCACGA............................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTAGAATGCCCACGACA............................................................................................................. 26 2 1 1.00 1 1 0 0 0 0
.............................................................................................TCCTCTCTTTCCCGTAGATCGAAACG......................................... 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAA............ 22 0 1 1.00 1 1 0 0 0 0
.....................TTCGTTTTGAGGACTGGAATGCCC................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGACAA............................................................................................................ 27 2 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGAGC............................................................................................................. 26 2 1 1.00 1 1 0 0 0 0
...................................................................CTATCTTATATCATGCCCTTCATCT.................................................................... 25 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................GTACTTGTTCTTGACGTCCAAGCCA........ 25 0 1 1.00 1 1 0 0 0 0
................................................................................TGCCCTTCATCTTTCCTCTCTTTCCCG..................................................... 27 0 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTGGAATGCC.................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................AAGTACTTGTTATTGACGTCCAAGC.......... 25 1 1 1.00 1 1 0 0 0 0
................................................................................................................................TACTTGTTCTTGACGTCCAAGCCAG....... 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................ACTTGTTCTTGACGTCCAAGCCAG....... 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................AAGTACTTGTTCTTGACGTCCAA............ 23 0 1 1.00 1 1 0 0 0 0
.........................................................................TATATCATGCCCTTCATCTTTCCTCT............................................................. 26 0 1 1.00 1 1 0 0 0 0
...............GTCAGCTGCGTTTTGAGGACTGG.......................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................TTTGAGGACTGGAATGCCCACGACA............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTGGAATGCCC................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.............GCGTCAGCTGCGTTTTGAGGACTGG.......................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTGGAATGCCTACGAC.............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
........................................................................TTATATCATGCCCTTCATCTTTCCTCT............................................................. 27 0 1 1.00 1 1 0 0 0 0
.............GCGTCAGCTGCGTTTTGAGGACTGGA......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................AGCACTTGTTCTTGACGTCCAAGC.......... 24 1 1 1.00 1 0 1 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAAGCCT........ 26 1 1 1.00 1 1 0 0 0 0
........................................................................TTATATCATGCCCTTCATCTTTCCTCTC............................................................ 28 0 1 1.00 1 1 0 0 0 0
..........................................................................ATATCATGCCCTTCATCTTTCCT............................................................... 23 0 1 1.00 1 1 0 0 0 0
................TCAGCTGCGTTTTGAGGACTGGA......................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAGGCCAG....... 27 1 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGACATC........................................................................................................... 28 2 1 1.00 1 1 0 0 0 0
................TCAGCTGCGTTTTGAGGACTGG.......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................ATCACTTGTTCTTGACGTCCAAGCCAGC...... 28 3 1 1.00 1 0 1 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGATT............................................................................................................. 26 2 1 1.00 1 1 0 0 0 0
............................TGAGGACTGGAATGCCCACGACG............................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................TTCCCGTAGATCGAAACGCTAAACAAG................................ 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................AGTACTTGTTCTTGACGTCCAATTA......... 25 3 1 1.00 1 1 0 0 0 0
.........................TTTTGAGGACTGGAATGCCCACGACT............................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
...............GTCAGCTGCGTTTTGAGGA.............................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0
............................TGAGGACTGGAATGCCCACGACATCG.......................................................................................................... 26 2 1 1.00 1 1 0 0 0 0
...................GCTGCGTTTTGAGGACTGGAATGCCC................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...................................................TGGGTAAATAGGGTTTCTAT......................................................................................... 20 3 13 0.46 6 1 0 5 0 0
....................................................GGGTAAATAGGGTTTCTATC........................................................................................ 20 3 6 0.17 1 1 0 0 0 0
..................................................CTGGGTAATTAGTGTTTCTA.......................................................................................... 20 3 10 0.10 1 0 0 0 0 1
.............................GAAGACTGGAGTGCCAACG................................................................................................................ 19 3 12 0.08 1 0 0 0 1 0
................................................ACGTGGGCGACAAGTGTGT............................................................................................. 19 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

ATCAGCTGGTCTTCGCAGTCGACGCAAAACTCCTGACCTTACGGGTGCTGCACCCATTGTTCACAAAGATAGAATATAGTACGGGAAGTAGAAAGGAGAGAAAGGGCATCTAGCTTTGCGATTTGTTCATGAACAAGAACTGCAGGTTCGGTCATTAGAT
**************************************************..(((((....((((.........))))..))))).........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
.............................................................................................................CTAGCTTTGCGATTTGTTCATGAACAA........................ 27 0 1 17.00 17 12 1 3 1
..........CTTCGCAGTCGACGCAAAACTCCTG............................................................................................................................. 25 0 1 10.00 10 9 1 0 0
................................................................................................................GCTTTGCGATTTGTTCATGAACAA........................ 24 0 1 7.00 7 7 0 0 0
...............................................................................................................AGCTTTGCGATTTGTTCATGAACAA........................ 25 0 1 5.00 5 5 0 0 0
.........TCTTCGCAGTCGACGCAAAACTCCTG............................................................................................................................. 26 0 1 4.00 4 4 0 0 0
...........TTCGCAGTCGACGCAAAACTCCTG............................................................................................................................. 24 0 1 3.00 3 2 0 1 0
...............................................................................................................AGCTTTGCGATTTGTTCATGAACA......................... 24 0 1 3.00 3 2 1 0 0
.............................................................................................................CTAGCTTTGCGATTTGTTCATGAACA......................... 26 0 1 2.00 2 1 1 0 0
..........................................................GTTCACAAAGATAGAATATAGTACG............................................................................. 25 0 1 2.00 2 2 0 0 0
.................................................................................................................CTTTGCGATTTGTTCATGAACAA........................ 23 0 1 2.00 2 1 0 1 0
..............GCAGTCGACGCAAAACTCCTG............................................................................................................................. 21 0 1 2.00 2 2 0 0 0
..............GCAGTCGACGCAAAACTCCTGAC........................................................................................................................... 23 0 1 2.00 2 2 0 0 0
.....................................................CCATTGTTCACAAAGATAGAATATAGT................................................................................ 27 0 1 2.00 2 2 0 0 0
...................................................ACCCATTGTTCACAAAGATAGAAT..................................................................................... 24 0 1 2.00 2 2 0 0 0
............TCGCAGTCGACGCAAAACTCCTG............................................................................................................................. 23 0 1 2.00 2 2 0 0 0
.........................................................TGTTCACAAAGATAGAATATAGTAC.............................................................................. 25 0 1 1.00 1 1 0 0 0
....................................................................ATAGAATATAGTACGGGAAGTAGAAAG................................................................. 27 0 1 1.00 1 1 0 0 0
..TAGCTGGTCTTCGCAGTCGACGCA...................................................................................................................................... 24 1 1 1.00 1 1 0 0 0
...............CAGTCGACGCAAAACTCCTGACCT......................................................................................................................... 24 0 1 1.00 1 0 1 0 0
........................................................TTGTTCACAAAGATAGAATATAGTA............................................................................... 25 0 1 1.00 1 1 0 0 0
..........................................................GTTCACAAAGATAGAATATAGT................................................................................ 22 0 1 1.00 1 1 0 0 0
.....................................................CCATTGTCCACAAAGATAGAATATAGTAC.............................................................................. 29 1 1 1.00 1 0 1 0 0
..................................................CACCCATTGTTCACAAAGATAGAAT..................................................................................... 25 0 1 1.00 1 1 0 0 0
................................................TGCACCCATTGTTCACAAAGATAG........................................................................................ 24 0 1 1.00 1 1 0 0 0
.......................................................................................GTAGAAAGGAGAGAAAGGGCATCT................................................. 24 0 1 1.00 1 1 0 0 0
..............................................GCTGCACCCATTGTTCACAAAGATAG........................................................................................ 26 0 1 1.00 1 1 0 0 0
.....................................................CCATTGTTCACAAAGATAGAATATAGTA............................................................................... 28 0 1 1.00 1 1 0 0 0
.............................................................CACAAAGATAGAATATAGTACGGTA.......................................................................... 25 1 1 1.00 1 0 1 0 0
.............CGCAGTCGACGCAAAACTCCTG............................................................................................................................. 22 0 1 1.00 1 0 1 0 0
..........................................................GTTCACAAAGATAGAATATAGTACGGAC.......................................................................... 28 2 1 1.00 1 1 0 0 0
.............CGCAGTCGACGCAAAACTCCTGAC........................................................................................................................... 24 0 1 1.00 1 1 0 0 0
.................................................................................................................CTTTGCGATTTGTTCATGAACA......................... 22 0 1 1.00 1 1 0 0 0
.....................................................CCATTGTTCACAAAGATAGAATATAG................................................................................. 26 0 1 1.00 1 1 0 0 0
.....................................................CCATTGTTCACAAAGATAGAGT..................................................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................CCATTGTTCACAAAGATAGAATATAGTAC.............................................................................. 29 0 1 1.00 1 1 0 0 0
......................................................CATTGTTCACAAAGATAGAATATAGTAC.............................................................................. 28 0 1 1.00 1 1 0 0 0
.........TCTTCGCAGTCGACGCAAAACTCCT.............................................................................................................................. 25 0 1 1.00 1 1 0 0 0
.......GGTCTTCGCAGTCGACGCAAAACTCCTG............................................................................................................................. 28 0 1 1.00 1 1 0 0 0
.............CGCAGTCGACGCAAAACTCCT.............................................................................................................................. 21 0 1 1.00 1 1 0 0 0
...................CGACGCAAAACTCCTGACCTTACGGGT.................................................................................................................. 27 0 1 1.00 1 1 0 0 0
...................................................................................GGAAGTAGAAAGGAGAGAAAGGGCATCT................................................. 28 0 1 1.00 1 1 0 0 0
............TCGCAGTCGACGCAAAACTCCTGAC........................................................................................................................... 25 0 1 1.00 1 1 0 0 0
...............................CCTGAACTTGGGGGTGCTG.............................................................................................................. 19 3 4 0.25 1 1 0 0 0
...............................CCTGACCTTGGGGGTGCAG.............................................................................................................. 19 3 5 0.20 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:16249368-16249527 + dmo_805 TAGT---CGACCAGAAGCGT--------CAGCTGCGTTTTGAGGACTGGAATGCCCACGACGTGGGTAA-C-----------------AAGTG---------------------------------------------TTTCTATCTTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTCTCTTTCCCGTAGATCGAAACGCTAAACAAGTACTTGTTCTTGACGTCCAAGCCAGTAATCTA
droVir3 scaffold_12970:9127458-9127638 - dvi_13726 TGAT---TGATCAGAAGCGT--------CATTTGCGCTTTGAGGACTGGAATGCGCACGATGTAAGCAC-C-----------------ATTTGTCCATTTGTATTTT---------------------GA------------------------------CTAT--TTTTGCAGTCGCCTTAATTGTTGCTTGCAT-------------------------------------------CTTTCTCTTGAATTTAGATTGAAACGTTGAACAAATATTTGTTTTTGACGTCCAAGCCAGCCATTTA
droGri2 scaffold_15203:11811945-11812126 - TGGT---CGAGCAAAAGCGT--------CACTTGCGCTTCGAGGATTGGAATGCACACGATGTAAACAA-T---------------------------------------TTTGA-----TAGCATTCTTGCTTATTTAATT----------G-----C----------AACAATTGCATCTCTTTTTGTTTCTGT-------------------------------------------TTCTGTCTCTGTTTTAGATTGAAACGTTGAACAAGTATTTGTTTTTGACCTCGAAGCCGGCCATCTA
droWil2 scf2_1100000004909:3256772-3256944 - TGAT---TGATCAGAAGCGT--------CATTTGCGCTTTGAAGATTGGAATGTCCATGATGTAAGTTT-A-----------------ACT----------------------------------------------------------------------------------------------GCTG-TCGCATCATCATATTAAACTTAATTAATCACTGATGTATTTC---------CTTTTCTCTTTCTAGATTGAGACATTAAATAAGTATTTATTTTTGACCTCAAAACCAGTGATTTA
dp5 XL_group3a:907735-907919 + TGAT---CGACCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCACGATGTGAGCGA-G-----------------AATCCC-------------CCCTCTCAATCTTTGCATCCCGCTCATACTAATGC----------T-----CTTCGC--TTTTG--------------------------------------------------------------CCCTCTCGCTCGCTCTTGTGCAGATTGAGGCGCTCAACAAGTATCTGTTCCTGACATCGAAGCCGGTCATCTA
droPer2 scaffold_15:1989041-1989225 - TGAT---CGACCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCACGATGTGAGCGA-G-----------------AATCCC-------------CCCTCTCAATCTTTGCATCCCGCTCATACTAATGA----------T-----CTCCGC--TTTTG--------------------------------------------------------------CCGTCTCGCTCGCTATTGTGCAGATTGAGGCGCTCAACAAGTATCTGTTCCTGACATCGAAGCCGGTCATCTA
droAna3 scaffold_13337:3499853-3499952 + TGGT---CGACCAGAAACGC--------CAGCTGCGCTTCGAGGACTGGAATGCCCACGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAGACATTAAACAAGTATCTGTTCCTGACCTCTAAGCCGGTCATTTA
droBip1 scf7180000396387:107798-107897 - TGGT---AGACCAGAAGCGC--------CAGCTGCGTTTTGAGGACTGGAATGCCCACGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAGGCATTGAACAAGTATCTTTTCCTGACTTCTAAGCCAGTCATCTA
droKik1 scf7180000302592:590452-590628 - TGGT---CGATCAGAAGCGT--------CACCTGCGCTTCGAGGACTGGAATGCCCACGATGTGAGTATATG----------------AACACC-------------C--TGTGG-----TACCTCTCGCTCTTATTAATGT----------T-----C---------------------------------------------------------------GACCCATCTCTCCAT----CTCTTTTCCTTTCAGATCGAGACACTGAACAAGTATCTGTTTTTGACCTCCAAGCCGGTCATCTA
droFic1 scf7180000454073:2611915-2611980 + CT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCTTTTTTAGATTGAGGCGCTGAACAAGTATCTATTCCTGACCTCCAAGCCGGTCATCTA
droEle1 scf7180000491013:533238-533299 + CCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTCAGATTGAGGCGCTGAACAAGTATCTGTTCCTGACCTCCAAGCCGGTGATCTA
droRho1 scf7180000780080:399358-399444 - TCT----------------------------------------------------------------------------------------------------------------------------------TATTAATGC----------TA---CCACCAC--T-------------------------------------------------------------ATTT---------TA----CTCTTTCAGATTGAGGCGCTGAACAAGTATCTGTTCCTGACCTCCAAGCCGGTCATCTA
droBia1 scf7180000302088:517520-517616 + TAGAGAGTGGTCAAAGAGTTGCTAATCACTCCT--------------GGACTTCAAAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGAAATTATCAACTCCATGTTTTTGTTGACTGCTAAGCCATGTATCTA
droTak1 scf7180000415872:322654-322744 + TCAT---CGACCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCACGATGTGAGTGC-G-----------------AAGAA---------------------------------------------ATCCACTTCAGTAT-----------------T----------------------------------------------------------------------------------------------------------------------------GTCCTGCATTTT
droEug1 scf7180000409032:212210-212413 - TCAT---CGACCAGAAGCGG--------CATCTGCGCTTCGAAGACTGGAATGCCCATGATGTAAGTGCAGAAATAGTTCCATGAAACATT--TCCATTTCCATTTTCCCTGTGA--TTTTCCATCCCTTTCTTATTAATGA----------AA---TCACTACTCT-------------------------------------------------------------ACTT---------TA----CTCTTTCAGATTGAGGCGCTGAACAAGTATCTGTTCCTGACCTCTAAGCCGGTCATCTA
dm3 chrX:9674876-9674932 + TTAT---CGATCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCATGATGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:9219264-9219322 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTCAGATTGAGGCCTTGAACAAGTATCTGTTCCTGACCTCCAAACCGGTCATCTA
droSec2 scaffold_15:438710-438766 + TCAT---CGACCAAAAGCGG--------CATCTGCGCTTCGAGGACTGGAATGCCCATGATGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:18275893-18275949 + TCAT---CGATCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCATGATGTGAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:5437709-5437765 - TCAT---CGACCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCATGATGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TAGT---CGACCAGAAGCGT--------CAGCTGCGTTTTGAGGACTGGAATGCCCACGACGTGGGTAA-C-----------------AAGTG---------------------------------------------TTTCTATCTTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTCTCTTTCCCGTAGATCGAAACGCTAAACAAGTACTTGTTCTTGACGTCCAAGCCAGTAATCTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAAGCCAG.......27190.00908600040
....................................TTTTGAGGACTGGAATGCCCACGACA....................................................................................................................................................................................................................................................26152.00525200000
....................................TTTTGAGGACTGGAATGCCCACGACG....................................................................................................................................................................................................................................................26132.00323000101
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAAGCC.........25120.00201500050
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAAGCCA........26116.00161600000
....................................TTTTGAGGACTGGAATGCCCACGAC.....................................................................................................................................................................................................................................................25114.00141300010
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAAGC..........24113.0013900040
......................................TTGAGGACTGGAATGCCCACGACA....................................................................................................................................................................................................................................................24112.00121200000
..................................................................................................................................................TTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTC..............................................................2618.008600020
....................................TTTTGAGGACTGGAATGCCCACGA......................................................................................................................................................................................................................................................2418.008800000
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAAG...........2317.007400120
...........................................................................................................................................TTCTATCTTATATCATGCCCTTCAT--C-------------------------------------------------------------T.............................................................................2716.006600000
.................................................................................................................................................................................................................................................................................GTACTTGTTCTTGACGTCCAAGCCAG.......2616.006600000
...........................................................................................................................................TTCTATCTTATATCATGCCCTTCAT--C-------------------------------------------------------------..............................................................................2615.005300020
................................................................................................................................................TCTTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------C................................................................2615.005500000
.....................................TTTGAGGACTGGAATGCCCACGACG....................................................................................................................................................................................................................................................2515.005500000
................................................................................................................................................TCTTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTC..............................................................2815.005500000
......................................TTGAGGACTGGAATGCCCACGAC.....................................................................................................................................................................................................................................................2313.003200010
......................................TTGAGGACTGGAATGCCCACGACGTG..................................................................................................................................................................................................................................................2613.003300000
......................................TTGAGGACTGGAATGCCCACGACG....................................................................................................................................................................................................................................................2413.003300000
....................................TTTTGAGGACTGGAATGCCCACGACGT...................................................................................................................................................................................................................................................2713.003300000
...................................................................................................................................................TATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTC..............................................................2513.003300000
....................................TTTTGAGGACTGGAATGCCCAC........................................................................................................................................................................................................................................................2212.002000020
......................................TTGAGGACTGGAATGCCCACGACGT...................................................................................................................................................................................................................................................2512.002200000
..GT---CGACCAGAAGCGT--------CAGCTGC...............................................................................................................................................................................................................................................................................2212.002000002
....................................TTTTGAGGACTGGAATGCCCACG.......................................................................................................................................................................................................................................................2312.002200000
...............................................................................................................................................................................................................................................................................AAGTACTTGTTCTTGACGTCCAAGC..........2512.002200000
...................T--------CAGCTGCGTTTTGAGGACTGGAA...............................................................................................................................................................................................................................................................2412.002200000
............................................................................................................................................TCTATCTTATATCATGCCCTTCAT--C-------------------------------------------------------------TT............................................................................2712.002200000
.......CGACCAGAAGCGT--------CAGCTGCGT.............................................................................................................................................................................................................................................................................2212.002200000
.......................................TGAGGACTGGAATGCCCACGACA....................................................................................................................................................................................................................................................2312.002200000
..........................................................................................................................................................................................................................................................................TAAACAAGTACTTGTTCTTGACGTCC..............2612.002200000
.....................................TTTGAGGACTGGAATGCCCACGA......................................................................................................................................................................................................................................................2312.002200000
...........CAGAAGCGT--------CAGCTGCGTTTTGAGGAC....................................................................................................................................................................................................................................................................2712.002200000
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCA.............2112.002200000
.................................................................................................................................................CTTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------C................................................................2511.001100000
................................................................................................................................................TCTTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CT...............................................................2711.001100000
................................................................................................................................................TCTTATATCATGCCCTTCAT--C-------------------------------------------------------------TTT...........................................................................2411.001000010
......................................TTGAGGACTGGAATGCCCACGACGTGG.................................................................................................................................................................................................................................................2711.001100000
.....................................TTTGAGGACTGGAATGCCCACGACGTG..................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................................................................................................................TC---------CTCTCTTTCCCGTAGATCGAAACGC........................................2711.001100000
........................................................................................................................................................................................................................................................TCCCGTAGATCGAAACGCTAAACA..................................2411.001100000
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAAGCCAGT......2811.001100000
...............................................................................................................................................................................................................................................................................AAGTACTTGTTCTTGACGTCCAAGCA.........2611.001000010
.......................................TGAGGACTGGAATGCCCACGACGTGG.................................................................................................................................................................................................................................................2611.001100000
...........CAGAAGCGT--------CAGCTGCGTT............................................................................................................................................................................................................................................................................1911.001100000
........................................GAGGACTGGAATGCCCACGACGT...................................................................................................................................................................................................................................................2311.001100000
...................T--------CAGCTGCGTTTTGAGGACTGGAATGC............................................................................................................................................................................................................................................................2711.001000010
.................CGT--------CAGCTGCGTTTTGAGGACTG..................................................................................................................................................................................................................................................................2311.001100000
...............AGCGT--------CAGCTGCGTTTTGAGGACTGG.................................................................................................................................................................................................................................................................2611.001100000
......................................................................................................................................................................................................................................................TTTCCCGTAGATCGAAACGCTAAACAAG................................2811.001100000
.............................AGCTGCGTTTTGAGGACT...................................................................................................................................................................................................................................................................1811.001100000
................GCGT--------CAGCTGCGTTTTGAGGA.....................................................................................................................................................................................................................................................................2111.001100000
....................................TTTTGAGGACTGGAATGCCCACGACGA...................................................................................................................................................................................................................................................2711.001000010
.....................................................................................................................................................................................................................................TTC---------CTCTCTTTCCCGTAGATCGAAACG.........................................2711.001100000
.................................................................................................................................................................................................................................................................................GTACTTGTTCTTGACGTCCAAGCC.........2411.001100000
...................................................................................................................................................TATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTCC.............................................................2611.001000010
......................................TTGAGGACTGGAATGCCCACGA......................................................................................................................................................................................................................................................2211.001100000
.....................................TTTGAGGACTGGAATGCCCACGAC.....................................................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................CTTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTC..............................................................2711.001100000
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCC..............2011.001100000
................................TGCGTTTTGAGGACTGGAATGCCCAC........................................................................................................................................................................................................................................................2611.001100000
...................................GTTTTGAGGACTGGAATGCCCACGA......................................................................................................................................................................................................................................................2511.001100000
......................................................................................................................................................................................................................................TC---------CTCTCTTTCCCGTAGATCGAAACG.........................................2611.001100000
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAA............2211.001100000
....................................TTTTGAGGACTGGAATGCCCACGACAA...................................................................................................................................................................................................................................................2711.001100000
....................................TTTTGAGGACTGGAATGCCCACGAGC....................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................CTATCTTATATCATGCCCTTCAT--C-------------------------------------------------------------T.............................................................................2511.001100000
.................................................................................................................................................................................................................................................................................GTACTTGTTCTTGACGTCCAAGCCA........2511.001100000
..........................................................................................................................................................TGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTCTCTTTCCCG.....................................................2711.001100000
....................................TTTTGAGGACTGGAATGCC...........................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................................................................................................TACTTGTTCTTGACGTCCAAGCCAG.......2511.001100000
...................................................................................................................................................................................................................................................................................ACTTGTTCTTGACGTCCAAGCCAG.......2411.001100000
...............................................................................................................................................................................................................................................................................AAGTACTTGTTCTTGACGTCCAA............2311.001100000
...................................................................................................................................................TATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTCT.............................................................2611.001100000
..................GT--------CAGCTGCGTTTTGAGGACTGG.................................................................................................................................................................................................................................................................2311.001100000
.....................................TTTGAGGACTGGAATGCCCACGACA....................................................................................................................................................................................................................................................2511.001100000
....................................TTTTGAGGACTGGAATGCCC..........................................................................................................................................................................................................................................................2011.001100000
................GCGT--------CAGCTGCGTTTTGAGGACTGG.................................................................................................................................................................................................................................................................2511.001100000
..................................................................................................................................................TTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTCT.............................................................2711.001100000
................GCGT--------CAGCTGCGTTTTGAGGACTGGA................................................................................................................................................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAAGCCT........2611.001100000
..................................................................................................................................................TTATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CTCTC............................................................2811.001100000
....................................................................................................................................................ATATCATGCCCTTCAT--C-------------------------------------------------------------TTTC---------CT...............................................................2311.001100000
...................T--------CAGCTGCGTTTTGAGGACTGGA................................................................................................................................................................................................................................................................2311.001100000
...................T--------CAGCTGCGTTTTGAGGACTGG.................................................................................................................................................................................................................................................................2211.001100000
....................................TTTTGAGGACTGGAATGCCCACGATT....................................................................................................................................................................................................................................................2611.001100000
.......................................TGAGGACTGGAATGCCCACGACG....................................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................TTCCCGTAGATCGAAACGCTAAACAAG................................2711.001100000
................................................................................................................................................................................................................................................................................AGTACTTGTTCTTGACGTCCAATTA.........2511.001100000
....................................TTTTGAGGACTGGAATGCCCACGACT....................................................................................................................................................................................................................................................2611.001000010
..................GT--------CAGCTGCGTTTTGAGGA.....................................................................................................................................................................................................................................................................1911.001000001
..............................GCTGCGTTTTGAGGACTGGAATGCCC..........................................................................................................................................................................................................................................................2611.001100000
droVir3
TGAT---TGATCAGAAGCGT--------CATTTGCGCTTTGAGGACTGGAATGCGCACGATGTAAGCAC-C-----------------ATTTGTCCATTTGTATTTT---------------------GA------------------------------CTAT--TTTTGCAGTCGCCTTAATTGTTGCTTGCAT-------------------------------------------CTTTCTCTTGAATTTAGATTGAAACGTTGAACAAATATTTGTTTTTGACGTCCAAGCCAGCCATTTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................AATATTTGTTTTTGACGTCCAAGCCAGC......2813.003300000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAATATTTGTTTTTGACGTCCAAGCC.........2611.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTTTGACGTCCAAGCCAGCC.....2011.001000000000000010000000000000000000000000000000000000000000000000
..............................TTTGCGCTTTGAGGACTGG.................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TATTTGTTTTTGACGTCCAAGCC.........2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTGTTGCTTGCAT-------------------------------------------CTTTCTCTTGA........................................................2411.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ACAAATATTTGTTTTTGACGTCC..............2311.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TGTTGCTTGCAT-------------------------------------------CTTTCTCTTG.........................................................2211.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AATATTTGTTTTTGACGTCC..............2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ATATTTGTTTTTGACGTCCAAG...........2211.001000000000000010000000000000000000000000000000000000000000000000
.GAT---TGATCAGAAGCGT--------CATTTGC...............................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
................GCGT--------CATTTGCGCTTTGAGGAC....................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
......................................TTGAGGACTGGAATGCGC..........................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
.............................................................GTAAGCAC-C-----------------ATTTGTCCATTTGTATTA........................................................................................................................................................................................................2711.001000000000000000000000000000000001000000000000000000000000000000
..................GT--------CATTTGCGCTTTGAGGAC....................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........GATCAGAAGCGT--------CATTTGC...............................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
....................................CTTTGAGGACTGGAATGC............................................................................................................................................................................................................................................................1811.001000000000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AATATTTGTTTTTGACGTC...............1911.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ACAAATATTTGTTTTTGACGTCCAA............2511.001000000000000010000000000000000000000000000000000000000000000000
droGri2
TGGT---CGAGCAAAAGCGT--------CACTTGCGCTTCGAGGATTGGAATGCACACGATGTAAACAA-T---------------------------------------TTTGA-----TAGCATTCTTGCTTATTTAATT----------G-----C----------AACAATTGCATCTCTTTTTGTTTCTGT-------------------------------------------TTCTGTCTCTGTTTTAGATTGAAACGTTGAACAAGTATTTGTTTTTGACCTCGAAGCCGGCCATCTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................GCGCTTCGAGGATTGGAATGC............................................................................................................................................................................................................................................................2112.00202
..................GT--------CACTTGCGCTTCGAGGA.....................................................................................................................................................................................................................................................................1911.00110
................................TGCGCTTCGAGGATTGGAAT..............................................................................................................................................................................................................................................................2011.00101
................................TGCGCTTCGAGGATTGGAA...............................................................................................................................................................................................................................................................1911.00110
droWil2
TGAT---TGATCAGAAGCGT--------CATTTGCGCTTTGAAGATTGGAATGTCCATGATGTAAGTTT-A-----------------ACT----------------------------------------------------------------------------------------------GCTG-TCGCATCATCATATTAAACTTAATTAATCACTGATGTATTTC---------CTTTTCTCTTTCTAGATTGAGACATTAAATAAGTATTTATTTTTGACCTCAAAACCAGTGATTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................TTGAAGATTGGAATGTCCAT........................................................................................................................................................................................................................................................2018.00801520
.....................................TTTGAAGATTGGAATGTCCAT........................................................................................................................................................................................................................................................2113.00300120
................................TGCGCTTTGAAGATTGGAATGTCCATGA......................................................................................................................................................................................................................................................2812.00202000
TGAT---TGATCAGAAGCGT--------CATTTGCGCTT...........................................................................................................................................................................................................................................................................2812.00202000
....................................CTTTGAAGATTGGAATGTCCAT........................................................................................................................................................................................................................................................2212.00200200
...................................GCTTTGAAGATTGGAATGTCCAT........................................................................................................................................................................................................................................................2312.00200110
............................CATTTGCGCTTTGAAGATTGGA................................................................................................................................................................................................................................................................2212.00200200
......................................TTGAAGATTGGAATGTCCATG.......................................................................................................................................................................................................................................................2112.00200101
..............................TTTGCGCTTTGAAGATTG..................................................................................................................................................................................................................................................................1811.00100010
........................................GAAGATTGGAATGTCCAT........................................................................................................................................................................................................................................................1811.00100010
....................................CTTTGAAGATTGGAATGTCCATGAT.....................................................................................................................................................................................................................................................2511.00100010
...................................GCTTTGAAGATTGGAATGTCCATGA......................................................................................................................................................................................................................................................2511.00100010
.GAT---TGATCAGAAGCGT--------CATTTGCGCT............................................................................................................................................................................................................................................................................2611.00100010
................................TGCGCTTTGAAGATTGGAATGTCCA.........................................................................................................................................................................................................................................................2511.00101000
...............AGCGT--------CATTTGCGCTTTGAAGATTGGG................................................................................................................................................................................................................................................................2711.00101000
............................CATTTGCGCTTTGAAGATTGGAAT..............................................................................................................................................................................................................................................................2411.00100010
...............................TTGCGCTTTGAAGATTGGAAT..............................................................................................................................................................................................................................................................2111.00100100
.....................................................................................................................................................................................................................................................................................TTATTTTTGACCTCAAAACCAGTGATT..2711.00101000
.............................ATTTGCGCTTTGAAGATTG..................................................................................................................................................................................................................................................................1911.00101000
.......TGATCAGAAGCGT--------CATTTGCGCTT...........................................................................................................................................................................................................................................................................2411.00101000
..............................TTTGCGCTTTGAAGATTGGAATGTCC..........................................................................................................................................................................................................................................................2611.00100100
..................GT--------CATTTGCGCTTTGAAGATTGGAAT..............................................................................................................................................................................................................................................................2611.00100010
TGAT---TGATCAGAAGCGT--------CATTTGCGCT............................................................................................................................................................................................................................................................................2711.00100001
dp5
TGAT---CGACCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCACGATGTGAGCGA-G-----------------AATCCC-------------CCCTCTCAATCTTTGCATCCCGCTCATACTAATGC----------T-----CTTCGC--TTTTG--------------------------------------------------------------CCCTCTCGCTCGCTCTTGTGCAGATTGAGGCGCTCAACAAGTATCTGTTCCTGACATCGAAGCCGGTCATCTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................ATCTGTTCCTGACATCGAAGCCGGT......2517.0070100001005
..................GT--------CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2414.0040210100000
............................CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2213.0030300000000
...................................................................................................................................................................................................................................................................................ATCTGTTCCTGACATCGAAGCCGGTC.....2613.0030200000001
...............................CTGCGCTTCGAGGACTGGAAT..............................................................................................................................................................................................................................................................2112.0020000000002
..................GT--------CATCTGCGCTTCGAGGACTGG.................................................................................................................................................................................................................................................................2312.0020200000000
..................GT--------CATCTGCGCTTCGAGGAC....................................................................................................................................................................................................................................................................2012.0020110000000
........................................................................................................................................................................................................................................................................................TTCCTGACATCGAAGCCGGTC.....2112.0020200000000
............................CATCTGCGCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................2611.0010000001000
..................GT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2111.0010100000000
..................GT--------CATCTGCGCTTCGAGGACC...................................................................................................................................................................................................................................................................2111.0010010000000
................................................................................................................................................................................................................................................................ATTGAGGCGCTCAACAAGTATCT...........................2311.0010000100000
...............................CTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................1911.0010100000000
.GAT---CGACCAGAAGCGT--------CATCTGCGC.............................................................................................................................................................................................................................................................................2511.0010100000000
.....................................TTCGAGGACTGGAATGCCCACGA......................................................................................................................................................................................................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................AACAAGTATCTGTTCCTGACATCGAA............2611.0010100000000
.....................................................................................................................................................................................................................................................................................CTGTTCCTGACATCGAAGCCGGTC.....2411.0010000100000
.............................................................................................................................................................................................................................................................................................GACATCGAAGCCGGTCATC..1911.0010000100000
.........................................AGGACTGGAATGCCCACGAT.....................................................................................................................................................................................................................................................2011.0010100000000
........................................GAGGACTGGAATGCCCACGAT.....................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................CAACAAGTATCTGTTCCTGACATCG..............2511.0010100000000
............................CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................1911.0010100000000
.............................ATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2111.0010100000000
...................................GCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................................................................................................................................................................ATCTGTTCCTGACATCGAAGCC.........2211.0010010000000
.GAT---CGACCAGAAGCGT--------CATCTGCGCTT...........................................................................................................................................................................................................................................................................2711.0010100000000
.......................................CGAGGACTGGAATGCCCACGAT.....................................................................................................................................................................................................................................................2211.0010000100000
.................CGT--------CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2511.0010100000000
............................CATCTGCGCTTCGAGGACTGG.................................................................................................................................................................................................................................................................2111.0010100000000
.......................................CGAGGACTGGAATGCCCACG.......................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................CTGACATCGAAGCCGGTC.....1811.0010100000000
.................................................................................................................................................................................................................................................................................GTATCTGTTCCTGACATCGAAGCCGGTC.....2811.0010010000000
...................................GCTTCGAGGACTGGAATGCCCA.........................................................................................................................................................................................................................................................2211.0010100000000
droPer2
TGAT---CGACCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCACGATGTGAGCGA-G-----------------AATCCC-------------CCCTCTCAATCTTTGCATCCCGCTCATACTAATGA----------T-----CTCCGC--TTTTG--------------------------------------------------------------CCGTCTCGCTCGCTATTGTGCAGATTGAGGCGCTCAACAAGTATCTGTTCCTGACATCGAAGCCGGTCATCTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................1918.008800000
..................GT--------CATCTGCGCTTCGAGGAC....................................................................................................................................................................................................................................................................2017.007700000
...................T--------CATCTGCGCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................2713.003300000
.............................ATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................1813.003300000
...................................................................................................................................................................................................................................................................................ATCTGTTCCTGACATCGAAGCCGGTC.....2612.002200000
...................................................................................................................................................................................................................................................................................ATCTGTTCCTGACATCGAAGCCGGT......2511.001100000
........................................GAGGACTGGAATGCCCACG.......................................................................................................................................................................................................................................................1911.001001000
.......................................CGAGGACTGGAATGCCCAC........................................................................................................................................................................................................................................................1911.001000010
.......................................CGAGGACTGGAATGCCCACGA......................................................................................................................................................................................................................................................2111.001100000
................................TGCGCTTCGAGGACTGGAAT..............................................................................................................................................................................................................................................................2011.001100000
..................GT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2111.001100000
.............GAAGCGT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2611.001100000
.......................................CGAGGACTGGAATGCCCACGAT.....................................................................................................................................................................................................................................................2211.001100000
.....................................TTCGAGGACTGGAATGCC...........................................................................................................................................................................................................................................................1811.001100000
.......................................CGAGGACTGGAATGCCCACGG......................................................................................................................................................................................................................................................2111.001100000
..................GT--------CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2411.001010000
................................TGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................1811.001100000
..........................................................................................................................................................................................................................................................................................CCTGACATCGAAGCCGGT......1811.001100000
.................CGT--------CATCTGCGCTTCGAGGAC....................................................................................................................................................................................................................................................................2111.001100000
......................................TCGAGGACTGGAATGCCC..........................................................................................................................................................................................................................................................1811.001100000
.........................................................................................................................................................................................................................................................................................TCCTGACATCGAAGCCGGT......1911.001010000
..........................................................................................................................................................................................................................................................................................CCTGACATCGAAGCCGGTC.....1911.001100000
.......................................CGAGGACTGGAATGCCCA.........................................................................................................................................................................................................................................................1811.001100000
.................................................................................................................................................................................................................................................................................GTATCTGTTCCTGACATC...............1811.001100000
............................CATCTGCGCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................2611.001100000
droAna3
TGGT---CGACCAGAAACGC--------CAGCTGCGCTTCGAGGACTGGAATGCCCACGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAGACATTAAACAAGTATCTGTTCCTGACCTCTAAGCCGGTCATTTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................CGAGGACTGGAATGCCCACGA......................................................................................................................................................................................................................................................2112.002110000
..................................................................................................................................................................................................................................................................................TATCTGTTCCTGACCTCTAAGCC.........2311.001010000
................................TGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................1811.001100000
.......CGACCAGAAACGC--------CAGCTGCGCTT...........................................................................................................................................................................................................................................................................2411.001100000
................................................GAATGCCCACGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAGACATTAAACA..................................2911.001100000
.............GAAACGC--------CAGCTGCGCTTCGAGGACTG..................................................................................................................................................................................................................................................................2711.001010000
...................................................................................................................................................................................................................................................................................ATCTGTTCCTGACCTCTAAGCC.........2211.001100000
.................................................AATGCCCACGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAGAC..........................................2011.001010000
.......................................................................................................................................................................................................................................................................................GTTCCTGACCTCTAAGCCGGT......2111.001010000
...................................................................................................................................................................................................................................................................................ATCTGTTCCTGACCTCTAAGCCGGT......2511.001010000
droBip1
TGGT---AGACCAGAAGCGC--------CAGCTGCGTTTTGAGGACTGGAATGCCCACGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAGGCATTGAACAAGTATCTTTTCCTGACTTCTAAGCCAGTCATCTASizeHit CountTotal NormTotal
No Reads
droKik1
TGGT---CGATCAGAAGCGT--------CACCTGCGCTTCGAGGACTGGAATGCCCACGATGTGAGTATATG----------------AACACC-------------C--TGTGG-----TACCTCTCGCTCTTATTAATGT----------T-----C---------------------------------------------------------------GACCCATCTCTCCAT----CTCTTTTCCTTTCAGATCGAGACACTGAACAAGTATCTGTTTTTGACCTCCAAGCCGGTCATCTASizeHit CountTotal NormTotal
No Reads
droFic1
CT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCTTTTTTAGATTGAGGCGCTGAACAAGTATCTATTCCTGACCTCCAAGCCGGTCATCTASizeHit CountTotal NormTotal
No Reads
droEle1
CCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTCAGATTGAGGCGCTGAACAAGTATCTGTTCCTGACCTCCAAGCCGGTGATCTASizeHit CountTotal NormTotal
No Reads
droRho1
TCT----------------------------------------------------------------------------------------------------------------------------------TATTAATGC----------TA---CCACCAC--T-------------------------------------------------------------ATTT---------TA----CTCTTTCAGATTGAGGCGCTGAACAAGTATCTGTTCCTGACCTCCAAGCCGGTCATCTASizeHit CountTotal NormTotal
No Reads
droBia1
TAGAGAGTGGTCAAAGAGTTGCTAATCACTCCT--------------GGACTTCAAAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGAAATTATCAACTCCATGTTTTTGTTGACTGCTAAGCCATGTATCTASizeHit CountTotal NormTotal
No Reads
droTak1
TCAT---CGACCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCACGATGTGAGTGC-G-----------------AAGAA---------------------------------------------ATCCACTTCAGTAT-----------------T----------------------------------------------------------------------------------------------------------------------------GTCCTGCATTTTSizeHit CountTotal NormTotal
No Reads
droEug1
TCAT---CGACCAGAAGCGG--------CATCTGCGCTTCGAAGACTGGAATGCCCATGATGTAAGTGCAGAAATAGTTCCATGAAACATT--TCCATTTCCATTTTCCCTGTGA--TTTTCCATCCCTTTCTTATTAATGA----------AA---TCACTACTCT-------------------------------------------------------------ACTT---------TA----CTCTTTCAGATTGAGGCGCTGAACAAGTATCTGTTCCTGACCTCTAAGCCGGTCATCTASizeHit CountTotal NormTotal
No Reads
dm3
TTAT---CGATCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCATGATGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................GT--------CATCTGCGCTTCGAGGACTGGAATG.............................................................................................................................................................................................................................................................27110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCGCTTCGAGGACTGGAATGCCCA.........................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000030000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGT--------CATCTGCGCTTCGAGGAC....................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................GT--------CATCTGCGCTTCGAGGACTGGAA...............................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGT--------CATCTGCGCTTCGAGGACTGGAATG.............................................................................................................................................................................................................................................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAT---CGATCAGAAGCGT--------CATCTGCGCT............................................................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000001000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATCTGCGCTTCGAGGACTGGAATGCCC..........................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000013100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GT--------CATCTGCGCTTCGAGGACTGGAAT..............................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTAT---CGATCAGAAGCGT--------CATCTGCGCT............................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGT--------CATCTGCGCTTCGAGGACTGGAAT..............................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGT--------CATCTGCGCTTCGAGGACTGGAA...............................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGT--------CATCTGCGCTTCGAGGACTGG.................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCGT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GCTTCGAGGACTGGAATGCCCATGAT.....................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTGCGCTTCGAGGACTGGAATGCCCAT........................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTGCGCTTCGAGGACTGGAATGCCC..........................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000
.........ATCAGAAGCGT--------CATCTGC...............................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................CGT--------CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATCTGCGCTTCGAGGACTGGAATGCC...........................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCGCTTCGAGGACTGGAATGCCC..........................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCGCTTCGAGGACTGGAATGCCCATGA......................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TCGAGGACTGGAATGCCCATGAT.....................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCGT--------CATCTGCGCTTCGAG.......................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGATCAGAAGCGT--------CATCTGCGCT............................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.........ATCAGAAGCGT--------CATCTGCGCT............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................CATCTGCGCTTCGAGGACTGGAATGCC...........................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................GT--------CATCTGCGCTTCGAGGACTGG.................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTGCGCTTCGAGGACTGGAATGCCCA.........................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GT--------CATCTGCGCTTCGAGGA.....................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCGT--------CATCTGCGCTTCGAGGACTGGAAT..............................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCAGAAGCGT--------CATCTGCGCTTCGAGGA.....................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GCTTCGAGGACTGGAATGCCCATGA......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATCTGCGCTTCGAGGACTGGAAT..............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGCGT--------CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGCGT--------CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GT--------CATCTGCGCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATCAGAAGCGT--------CATCTGCG..............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................GCGT--------CATCTGCGCTTCGAGGACTG..................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCGCTTCGAGGACTGGAATGCC...........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CGAGGACTGGAATGCCCATGAT.....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGCGT--------CATCTGCGCTTCGA........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GAGGACTGGAATGCCCATGAT.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTGCGCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGCGT--------CATCTGCGCTTCGAGGA.....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTGCGCTTCGAGGACTGG.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................GCGT--------CATCTGCGCTTCGAGGAC....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTAT---CGATCAGAAGCGT--------CAT...................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCGCTTCGAGGACTGGAA...............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCGCTTCGAGGACTGGAATGCCCATG.......................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AT---CGATCAGAAGCGT--------CATCTGCGCT............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................ATCTGCGCTTCGAGGACTGGAATGCCCA.........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CATCTGCGCTTCGAGGACTGGAAT..............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATCTGCGCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CTTCGAGGACTGGAATGCCCA.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TCGAGGACTGGAATGCCCA.........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........TCAGAAGCGT--------CATCTGCGCTTCGAGGACTG..................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTAT---CGATCAGAAGCGT--------CATCTGC...............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................CATCTGCGCTTCGAGGACTGGAATG.............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................GCGCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AGGACTGGAATGCCCATGAT.....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTGCGCTTCGAGGACTGGAATGCATC.........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCGCTTCGAGGACTGGAATGCCA..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGCGT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TCGAGGACTGGAATGCCCATGA......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAT---CGATCAGAAGCGT--------CATCTGC...............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGCGT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GT--------CATCTGCGCTTCGAGGACTG..................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GATCAGAAGCGT--------CATCTGCGC.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................GCGT--------CATCTGCGCTTCGAGGACTGGAA...............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTCAGATTGAGGCCTTGAACAAGTATCTGTTCCTGACCTCCAAACCGGTCATCTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................AAGTATCTGTTCCTGACCT................1913.00301200000000000000
.................................................................................................................................................................................................................................................................................GTATCTGTTCCTGACCTCCA.............2012.00200200000000000000
..............................................................................................................................................................................................................................................................................CAAGTATCTGTTCCTGACCTCCAAACC.........2711.00100100000000000000
..........................................................................................................................................................................................................................................................TTTCAGATTGAGGCCTTGAAC...................................2111.00110000000000000000
...............................................................................................................................................................................................................................................................................AAGTATCTGTTCCTGACC.................1811.00101000000000000000
....................................................................................................................................................................................................................................................................................TCTGTTCCTGACCTCCAAACCGGTCA....2611.00100100000000000000
...............................................................................................................................................................................................................................................................................AAGTATCTGTTCCTGACCTCC..............2111.00100100000000000000
...................................................................................................................................................................................................................................................................................ATCTGTTCCTGACCTCCAAACCGGT......2511.00101000000000000000
................................................................................................................................................................................................................................................................................AGTATCTGTTCCTGACCT................1811.00110000000000000000
droSec2
TCAT---CGACCAAAAGCGG--------CATCTGCGCTTCGAGGACTGGAATGCCCATGATGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........GACCAAAAGCGG--------CATCTGCGCT............................................................................................................................................................................................................................................................................2211.0010010
...................................GCTTCGAGGACTGGAATG.............................................................................................................................................................................................................................................................1811.0011000
............................CATCTGCGCTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................2611.0010010
.................................GCGCTTCGAGGACTGGAAT..............................................................................................................................................................................................................................................................1911.0010010
................................TGCGCTTCGAGGACTGGAATGCC...........................................................................................................................................................................................................................................................2311.0010010
..............................TCTGCGCTTCGAGGACTGG.................................................................................................................................................................................................................................................................1911.0010010
....................................CTTCGAGGACTGGAATGC............................................................................................................................................................................................................................................................1811.0010010
droYak3
TCAT---CGATCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCATGATGTGAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................CGT--------CATCTGCGCTTCGAGGACTGG.................................................................................................................................................................................................................................................................2412.00201000100000
............................CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2212.00201100000000
..AT---CGATCAGAAGCGT--------CATCTGCG..............................................................................................................................................................................................................................................................................2311.00101000000000
....................................CTTCGAGGACTGGAATGCCC..........................................................................................................................................................................................................................................................2011.00100000010000
..............................TCTGCGCTTCGAGGACTGG.................................................................................................................................................................................................................................................................1911.00100000010000
...............................CTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................1911.00100000010000
.................................GCGCTTCGAGGACTGGAA...............................................................................................................................................................................................................................................................1811.00101000000000
.......CGATCAGAAGCGT--------CATCTGCG..............................................................................................................................................................................................................................................................................2111.00101000000000
...............AGCGT--------CATCTGCGCTTCGA........................................................................................................................................................................................................................................................................1911.00101000000000
.................CGT--------CATCTGCGCTTCGAGGACTGA.................................................................................................................................................................................................................................................................2411.00101000000000
...................T--------CATCTGCGCTTCGAGGACTGGAA...............................................................................................................................................................................................................................................................2411.00101000000000
droEre2
TCAT---CGACCAGAAGCGT--------CATCTGCGCTTCGAGGACTGGAATGCCCATGATGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...T---CGACCAGAAGCGT--------CATCTGCGCTTCG.........................................................................................................................................................................................................................................................................2715.0050000005
.....................................TTCGAGGACTGGAATGCCCAT........................................................................................................................................................................................................................................................2112.0021100000
.................CGT--------CATCTGCGCTTCGAGG......................................................................................................................................................................................................................................................................1911.0010000100
...............AGCGT--------CATCTGCGCTTCGAGGACT...................................................................................................................................................................................................................................................................2411.0011000000
........GACCAGAAGCGT--------CATCTGCGC.............................................................................................................................................................................................................................................................................2111.0010100000
...................T--------CATCTGCGCTTCGAGGACTGGA................................................................................................................................................................................................................................................................2311.0010000100

Generated: 05/17/2015 at 11:03 PM