ID:

dmo_802

 Coordinate:

scaffold_6473:16248409-16248559 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.4 -21.2 -21.2

Flybase annnotation

exon [dmoj_GLEANR_16681:1]; CDS [Dmoj\GI15984-cds]; intron [Dmoj\GI15984-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGCCGCGCCGGCCGAAAATTTCCCCTTCTGCACCATTAAGCCCAATGAGAATAAGTATTCCAATTACCAAGAGCTGCGATGCCGCCGGCCATTGGAGTCGCAATTTGCGTTGCCTCCAAATAATTGTAATCAATGCAATTTTTTGTCCGTTCGGGGCATTGCATTGCCGCAGCTTCCCTGTGTCGCTTCTATGTTGGCTGCCGTCGCGGGGGCGTGTCCCAATCTCGGCAATTTGCCAGATCTAGTTGCAG
***************************************************************...((((..((((((....)).))))..))))...((((...)))).......((((.(((((((.....))))))).)))).....***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
 V056
head
...............................................................TTACCAAGAGCTGCGATGCCGCCGG................................................................................................................................................................... 25 0 1 49.00 49 48 0 1 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGAGTCG..................................................................................................................................................................................................... 28 3 1 39.00 39 36 3 0 0 0 0
..........................................................................................................................................................................................TTCTATGTTGGCTGCCGTCGCGGGG........................................ 25 0 1 23.00 23 22 0 1 0 0 0
..........................................................................................................................................................................................TTCTATGTTGGCTGCCGTCGCGGG......................................... 24 0 1 23.00 23 18 4 1 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGAGT....................................................................................................................................................................................................... 26 1 1 22.00 22 12 9 1 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGCCGGC.................................................................................................................................................................. 26 0 1 22.00 22 20 2 0 0 0 0
............................................................................................................................TGTAATCAATGCAATTTTTTGTCCGT..................................................................................................... 26 0 1 21.00 21 20 0 1 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGAGTC...................................................................................................................................................................................................... 27 2 1 15.00 15 9 6 0 0 0 0
...........................................................................................................................................................................................TCTATGTTGGCTGCCGTCGCGGGG........................................ 24 0 1 14.00 14 12 0 1 1 0 0
..........................TCTGCACCATTAAGCCCAATGAGAG........................................................................................................................................................................................................ 25 1 1 10.00 10 6 4 0 0 0 0
...........................................................................................................................................................................................TCTATGTTGGCTGCCGTCGCGGG......................................... 23 0 1 9.00 9 8 1 0 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGAAT....................................................................................................................................................................................................... 26 0 1 9.00 9 7 2 0 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGCCG.................................................................................................................................................................... 24 0 1 7.00 7 7 0 0 0 0 0
..........................................................................................................................................................................................TTCTATGTTGGCTGCCGTCGCGG.......................................... 23 0 1 7.00 7 7 0 0 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGCC..................................................................................................................................................................... 23 0 1 7.00 7 2 5 0 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGCCGGCCA................................................................................................................................................................ 28 0 1 7.00 7 7 0 0 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGCCGGCCAT............................................................................................................................................................... 29 0 1 6.00 6 6 0 0 0 0 0
................................................................TACCAAGAGCTGCGATGCCGCCGG................................................................................................................................................................... 24 0 1 5.00 5 5 0 0 0 0 0
...........................................................................................................................................................................................TCTATGTTGGCTGCCGTCGCGG.......................................... 22 0 1 5.00 5 4 0 0 1 0 0
..........................TCTGCACCATTAAGCCCAATGAGAGC....................................................................................................................................................................................................... 26 2 1 5.00 5 0 5 0 0 0 0
...........................................................................................................................................................................................TCTATGTTGGCTGCCGTCGCGGGGGC...................................... 26 0 1 5.00 5 3 2 0 0 0 0
..........................................................................................................................................................................................TTCTATGTTGGCTGCCGTCGCGGGGG....................................... 26 0 1 5.00 5 5 0 0 0 0 0
.......................................................TATTCCAATTACCAAGAGCTGCGATG.......................................................................................................................................................................... 26 0 1 4.00 4 3 0 1 0 0 0
.........................................................TTCCAATTACCAAGAGCTGCGATGCCGC...................................................................................................................................................................... 28 0 1 4.00 4 4 0 0 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGAATA...................................................................................................................................................................................................... 27 0 1 4.00 4 4 0 0 0 0 0
...........................................................................................................................................................................................TCTATGTTGGCTGCCGTCGCGGGGG....................................... 25 0 1 3.00 3 3 0 0 0 0 0
....................TCCCCTTCTGCACCATTAAGCCCAATGA........................................................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGA......................................................................................................................................................................................................... 24 0 1 3.00 3 2 1 0 0 0 0
..............................................................................................................................................................................TCCCTGTGTCGCTTCTATGTTGGC..................................................... 24 0 1 3.00 3 3 0 0 0 0 0
.........................................................TTCCAATTACCAAGAGCTGCGATGCCGCC..................................................................................................................................................................... 29 0 1 3.00 3 2 1 0 0 0 0
................................................................TACCAAGAGCTGCGATGCCGCCGGC.................................................................................................................................................................. 25 0 1 3.00 3 3 0 0 0 0 0
....................TCCCCTTCTGCACCATTAAGCCCAATGAG.......................................................................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0
..........................TCCGCACCATTAAGCCCAATGAGAGT....................................................................................................................................................................................................... 26 2 1 2.00 2 0 2 0 0 0 0
.........................................................TTCCAATTACCAAGAGCTGCGATG.......................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
..........................TGTGCACCATTAAGCCCAATGAGAGT....................................................................................................................................................................................................... 26 2 1 2.00 2 0 2 0 0 0 0
............................................................................................................................TGTAATCAATGCAATTTTTTGTCCG...................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
..................................................ATAAGTATTCCAATTACCAAGAGC................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0
............................................................................................................................TGTAATCAATGCAATTTTTTGTCCGTC.................................................................................................... 27 1 1 2.00 2 1 0 1 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGC...................................................................................................................................................................... 22 0 1 2.00 2 1 1 0 0 0 0
............................................................................................................................................................................................CTATGTTGGCTGCCGTCGCGGG......................................... 22 0 1 2.00 2 2 0 0 0 0 0
..........................................................TCCAATTACCAAGAGCTGCGATGCCGCC..................................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0
....................TCCCCTTCTGCACCATTAAGCCCA............................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
.............................................................................................................................GTAATCAATGCAATTTTTTGTCCGT..................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGCCGA................................................................................................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTATTCCAATTACCAAGAGCTGCGA............................................................................................................................................................................ 28 0 1 2.00 2 2 0 0 0 0 0
..................................................ATAAGTATTCCAATTACCAAGAGCT................................................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGAA........................................................................................................................................................................................................ 25 0 1 2.00 2 0 2 0 0 0 0
..............................................................................................................................................................................TCCCTGTGTCGCTTCTATGTTGG...................................................... 23 0 1 2.00 2 2 0 0 0 0 0
..................TTTCCCCTTCTGCACCATTAAGCCCA............................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTATTCCAATTACCAAGAGCTG............................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0
...........................................................................................................................................................................................TCTATGTTGGCTGCCGTCGCGGGGGCG..................................... 27 0 1 2.00 2 2 0 0 0 0 0
...................TTCCCCTTCTGCACCATTAAGCCCAATG............................................................................................................................................................................................................ 28 0 1 2.00 2 2 0 0 0 0 0
...........................CTGCACCATTAAGCCCAATGAGAAT....................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
.........................................................TTCCAATTACCAAGAGCTGCGATGCCG....................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0
..........................TCTGCACCATTAAGCCCAATGAG.......................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................................................TTGCATTGCCGCAGCTTCCCTC....................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
................................................................TACCAAGAGCTGCGATGCCGCCGGCCAT............................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................TGTAATCAATGCAATTTTTTGTCCGTTC................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..........................GCTGCACCATTAAGCCCAATGAGAGTT...................................................................................................................................................................................................... 27 3 1 1.00 1 0 1 0 0 0 0
..........................................................TCCAATTACCAAGAGCTGCGATGCCGC...................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................AATGTAATCAATGCAATTTTTTGTCCG...................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
...........................CTGCACCATTAAGCCCAATGAGAG........................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGAGTT...................................................................................................................................................................................................... 27 2 1 1.00 1 0 1 0 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGCCGGCCT................................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................TCGGGGCATTGCATTGCCGCAGCTTC........................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TCGCGGGGGCGTGTCCCAATCTCGGC...................... 26 0 1 1.00 1 1 0 0 0 0 0
..........................TCCGCACCATTAAGCCCAATGAGAAT....................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................AATCAATGCAATTTTTTGTCCGTC.................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...............................................................TTATCAAGAGCTGCGATGCCGCC..................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
......GCCGGCCGAAAATTTCCCCTTCTGCACCA........................................................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0
.......................................................TATTCCAATTAGCAAGAGCTGCGA............................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
....................TCCCCTTCTGCACCATTAAGCCC................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
..........................TGTGCACCATTAAGCCCAATGAAAAT....................................................................................................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................ATTCTATGTTGGCTGCCGTCGCGGGG........................................ 26 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................CTCCCTGTGTCGCTTCTATGTTGGC..................................................... 25 1 1 1.00 1 1 0 0 0 0 0
...............................................................TGACCAAGAGCTGCGATGCCGCC..................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..............................................................ATTACCAAGAGCTGCGATGCCGCCGG................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
............................TGCACCATTAAGCCCAATGAGAG........................................................................................................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................TGTTGGCTGCCGTCGCGGGGGCGTGT.................................. 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................TGTCCCAATCTCGGCAATTTGCCAGATC......... 28 0 1 1.00 1 1 0 0 0 0 0
...............................................................TTACCAAGAGCTGCGATGCCGCCGGCC................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
...............................................................TTACCAAGAGCTGCGATCCCGCC..................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..........................TGTGCACCATTAAGCCCAATGAGAATA...................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................TGTCCGTTCGGGGCATTGCATTGCCGCA................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0
...............................................................TGACCAAGAGCTGCGATGCCGC...................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................TTACCAAGAGATGCGAAGCCGCCCGC.................................................................................................................................................................. 26 3 1 1.00 1 0 0 0 1 0 0
...............................................................TTACCAAGAGCTGCGATGCC........................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................TGTCCGTTCGGGGCATTGCATTG..................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.......................................................TATTCCAATTACCAAGAGCTGCGATGC......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...........................CTGCACCATTAAGCCCAATGAGAGTCG..................................................................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................TGTTGGCTGCCGTCGCGGGGGCGTG................................... 25 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................TAATCAATGCAATTTTTTGTCCGTTCGG................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................TCAATGCAATTTTTTGTCCGTTCGGGGCA............................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................CCTTCTATGTTGGCTGCCGTCGCGGGG........................................ 27 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................TATGTTGGCTGCCGTCGCGGGG........................................ 22 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................TCTATGTTGGCTGCCGTCGCGGGGGG...................................... 26 1 1 1.00 1 0 0 0 1 0 0
...................................................TAAGTATTCCAATTACCAAGAGCT................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
..........................................................TCCAATTACCAAGAGCTGCGATGCCGCCG.................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................TTCTATGTTGGCTGCCGTCGCGGGGGC...................................... 27 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TCGCGGGGGCGTGTCCCAATCTCG........................ 24 0 1 1.00 1 1 0 0 0 0 0
...............................................................CTACCAAGAGCTGCGATGCCGCC..................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................................................TTCTATGTTGGCTGCCGTCGCG........................................... 22 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................GTAATCAATGCAATTTTTTGTCCG...................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...............................................................TGACCAAGAGCTGCGATGCCGCCGGCCAT............................................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................................TCTTTGTTGGATGCCGTCGCGGGGGC...................................... 26 2 1 1.00 1 0 1 0 0 0 0
..............................................................ATTACCAAGAGCTGCGATGCCGCC..................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................TTCCAATTACCAAGAGCTGCGAT........................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
..........................TCTGCACCATTAAGCCCAATGAAAATCC..................................................................................................................................................................................................... 28 3 1 1.00 1 1 0 0 0 0 0
..........................TGTGCACCATTAAGCCCAATGAGAG........................................................................................................................................................................................................ 25 2 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................TATGTTGGCTGCCGTCGCGGGGGC...................................... 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................ACCAAGAGCTGCGATGCCGCCGG................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
....................................................................AAGAGCTGCGATGCCGCCGG................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTGGAGTCGCAATTTGCGTC............................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................TCCCTGTGTCGCTTCTATGTTGGCTG................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..........................................................TCCAATTACCAAGAGCTGCGATGC......................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
..........................TCTGCACCATTAAGCCCAATGAGAACA...................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
............................TGCACCATTAAGCCCAATGAGAGTCG..................................................................................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
........................GCTCTGCACCATTAAGCCCAATGAGAG........................................................................................................................................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................TTCCCTGTGTCGCTTCTATGTTGGCTG................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.........................................................TTCCAATTACCAAGAGCTGCGATGCCT....................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
.................................CATTAAGCCCAATGAGAAT....................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
.........................................................TTCCAATTACCAAGAGCTGCGATGCC........................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
....................................................AAGTATTCCAATTACCAAGAGCT................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
...............................................................TTACCAAGAGCGGCGATGCCGCCGG................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
..............................................................CTCACCAAGAGCTGCGATGCCGCC..................................................................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................ATAAGTATTCCAATTACCAAGAGCTGCGA............................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0
...............................................................................TTCCGCCGGCCATTGGAGTCGCAATT.................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0
.................................................................................................TCGCAATTTGCGTTGCCTCCAAATA................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................TGTAATCAATGCAATTTTTTGTCCGTT.................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...............................................................TGACCAAGAGCTGCGATGCCGCCGGCC................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0
....................TCCCCTTCTGCACCATTAAGCCCAAT............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
.........................TTCTGCACCATTAAGCCCAATGAG.......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................TGCCTGTGTCGCTTCTATGTTGGCTG................................................... 26 1 1 1.00 1 0 1 0 0 0 0
..................................ATTAAGCCCAATGAGAAA....................................................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0
......................................................................................GGGCATTGGAGTCGCATTGTG................................................................................................................................................ 21 3 6 0.33 2 0 0 0 0 2 0
......................................................................................GGCCATTGGAGTCGCACTGTC................................................................................................................................................ 21 3 3 0.33 1 0 0 0 0 0 1
...........................................................................................................................................ATTTTGTCCGTTCAAGGCATT........................................................................................... 21 3 4 0.25 1 0 0 0 0 0 1
..................................ATTAAGCCCAATGAGAGTC...................................................................................................................................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0
....................................................................................................................CAAATAATTGTACTAAATCCAA................................................................................................................. 22 3 9 0.22 2 2 0 0 0 0 0
......................................................................................GTCCATTGTAGTCGCAATTTC................................................................................................................................................ 21 3 5 0.20 1 0 0 0 0 1 0
...............................................................TTACAAAGAGCCGCGTTGCC........................................................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 1 0
....................................................................................................................CAAATAATTGTACTAAATCCA.................................................................................................................. 21 3 16 0.13 2 1 0 1 0 0 0
.............................................................................................................................................................................................................................ATCTCGACACTTTGGCAGA........... 19 3 20 0.05 1 0 0 0 0 0 1
...........................................AATGGGAATAAGGGTTCCA............................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

GCGGCGCGGCCGGCTTTTAAAGGGGAAGACGTGGTAATTCGGGTTACTCTTATTCATAAGGTTAATGGTTCTCGACGCTACGGCGGCCGGTAACCTCAGCGTTAAACGCAACGGAGGTTTATTAACATTAGTTACGTTAAAAAACAGGCAAGCCCCGTAACGTAACGGCGTCGAAGGGACACAGCGAAGATACAACCGACGGCAGCGCCCCCGCACAGGGTTAGAGCCGTTAAACGGTCTAGATCAACGTC
*****************************************************************************************************...((((..((((((....)).))))..))))...((((...)))).......((((.(((((((.....))))))).)))).....*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
..............................................................................................................ACGGAGGTTTATTAACATTAGTTA..................................................................................................................... 24 0 1 9.00 9 9 0 0 0 0
...............................................................................................................CGGAGGTTTATTAACATTAGTTA..................................................................................................................... 23 0 1 7.00 7 6 1 0 0 0
...........................................................................................................................................................................CGAAGGGACACAGCGAAGATACAAC....................................................... 25 0 1 7.00 7 5 2 0 0 0
................................................................................................................GGAGGTTTATTAACATTAGTTA..................................................................................................................... 22 0 1 7.00 7 7 0 0 0 0
...........GGCTTTTAAAGGGGAAGACGTGGTA....................................................................................................................................................................................................................... 25 0 1 6.00 6 5 0 1 0 0
...........................................................................................................................................................................CGAAGGGACACAGCGAAGATACAACC...................................................... 26 0 1 5.00 5 5 0 0 0 0
.............CTTTTAAAGGGGAAGACGTGGTA....................................................................................................................................................................................................................... 23 0 1 4.00 4 3 1 0 0 0
............GCTTTTAAAGGGGAAGACGTGGTA....................................................................................................................................................................................................................... 24 0 1 3.00 3 2 0 1 0 0
..............................................................................................................................................................................AGGGACACAGCGAAGATACAAC....................................................... 22 0 1 3.00 3 3 0 0 0 0
......CGGCCGGCTTTTAAAGGGGAAGAC............................................................................................................................................................................................................................. 24 0 1 3.00 3 3 0 0 0 0
.............................................ACTCTTATTCATAAGGTTAATGGTTCTC.................................................................................................................................................................................. 28 0 1 3.00 3 3 0 0 0 0
........................................................................................................................................................................CGTCGAAGGGACACAGCGAAGATACAAC....................................................... 28 0 1 2.00 2 2 0 0 0 0
................................................CTTATTCATAAGGTTAATGGTTCTC.................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
.......GGCCGGCTTTTAAAGGGGAAGA.............................................................................................................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0
.......................................CGGGTTACTCTTATTCATAAGGTTAA.......................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
..............................................CTCTTATTCATAAGGTTAATGGTTCTC.................................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
...............................................................................................................................................................................GGGACACAGCGAAGATACAAC....................................................... 21 0 1 2.00 2 2 0 0 0 0
..............................................................................................................ACGGAGGTTTATTTACATTAGTTA..................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.....................................................................TCTCGACGCTACGGCGGCCGGTAACCT........................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
................................................................................CGGCGGCCGGTAACCTCAGTGGT.................................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................CTCGAAGGGACACAGCGAAGATACAAC....................................................... 27 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................ACGGCGTCGAAGGGACACAGCGAAGAT............................................................ 27 0 1 1.00 1 0 0 1 0 0
.........CCCGCTTTTAAAGGGGAAGACGTGGTA....................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
.........CCGGCTTTTAAAGGGGAACAC............................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0
................................................................................................................................................................CGTAACGGCGTCGAAGGGACACAG................................................................... 24 0 1 1.00 1 1 0 0 0 0
................................................................................................................GGAGGTTTATTAACATTAGTT...................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................GAAGGGACACAGCGAAGATACAAC....................................................... 24 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................CGAAGGGACACAGCGAAGATATAAC....................................................... 25 1 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................GGGACACAGCGAAGATACAACC...................................................... 22 0 1 1.00 1 1 0 0 0 0
................................................................................CGGCGGCCGGTAACCTCAGCGTT.................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
....................................................................CTCTCGACGCTACGGCGGCCGGTAACCT........................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
............................................................................................................CAACGGAGGTTTATTAACATTAGTTA..................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................................TTATTCATAAGGTTAATGGTTC.................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................TCGAAGGGACACAGCGAAGATACAAC....................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................GCCGTTAAACGGTCTAGATCAACGT. 25 0 1 1.00 1 1 0 0 0 0
......................................TCGGGTTACTCTTATTCATAAGG.............................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................ACGGAGGTTTATTAACATTAGTTACGT.................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................TTAAAAAACAGGCAAGCCCCGTAACGT........................................................................................ 27 0 1 1.00 1 0 1 0 0 0
................TTAAAGGGGAAGACGTGGT........................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................GGACACAGCGAAGATACAAC....................................................... 20 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................GAAGGGACACAGCGAAGATACAACC...................................................... 25 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................AGGGACAGAGCGAAGATACAAC....................................................... 22 1 1 1.00 1 1 0 0 0 0
..............................................................................TACGGCGGCCGGTAACCTCAGCGT..................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.........CCGGCTTTTAAAGGGGAAGACGTGGTA....................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.................................................................................GGCGGCCGGTAACCTCAGCG...................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0
...............................................................................................................CGGAGGTTTATTAACATTAGTGA..................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................CCCGCACAGGGTTAGAGCCGTTAA.................. 24 0 1 1.00 1 1 0 0 0 0
...............TTTAAAGGGGAAGACGTGGTA....................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..........CGGCTTTTAAAGGGGAAGACGTGGTA....................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................CACTCTTATTCATAAGGTTAATGGTTCTC.................................................................................................................................................................................. 29 1 1 1.00 1 1 0 0 0 0
.............................................................................CTACGGCGGCCGGTAACCTCAGCGTT.................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................................GTTTATTAACATGATTTAGGTT................................................................................................................. 22 3 9 0.56 5 3 0 2 0 0
...............................................................................................................................................................AGGTAACGGCTTCTAAGGGA........................................................................ 20 3 10 0.40 4 2 0 2 0 0
...............................................TCTGTTTCATAATGTTAATGGT...................................................................................................................................................................................... 22 3 7 0.29 2 0 0 0 0 2
....................................................................................................................GTTTATTAACATGATTTAGGT.................................................................................................................. 21 3 16 0.25 4 4 0 0 0 0
................TTAAAGGGGAAGAAGTTG......................................................................................................................................................................................................................... 18 2 8 0.13 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:16248359-16248609 + dmo_802 CGCCGCGCCGGCCGAAAATTTCCCCTTCTGCACCATTAAGCCCAATGAGAATAAGTATTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGCC-------ATTGGA---------------------------GTCGCAATTTGCGTTGCCTCC-----AAATAATTGTAATCA-----------ATGCAATTTTTTG-T--------CCGTTCGGG--GCATTGCATT-------------------------GCCGCAGCTTCCCTGTGTCGCTTCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGCGTGTCCCA-------------ATCTCGGCAATT-TGCCAGATCTAGTTGCAG----
droVir3 scaffold_12970:9128432-9128691 - dvi_13724 CGCCGCTCCAGCTGAGAATTTCCCCTTCTGCACCATTAAGCCCAATGAGAATAAGTATTCC-------------------------------------------AATTATC-----------------------------------------------------------------------------------ATCAGCAGCCGCTGGCC-------ATTCCA---------------------------ATCGCAATTTACGTTGCCTTT-----AAATAATTGTAATCAATGGCATTTGAA--CAATTTTTTTTT----TTTTGCGT---T----CAATCGATTGCCT--------------------TGCCGAAGCTTCCAAGAGTTGCTTCTTA---------CTTTGCTGCCGTCGC----------------------------------------------------------------------------GGGGGCGTGGCCCA-------------GTCTCGGCAATT-TGCCGGATCTAGTTGCAG----
droGri2 scaffold_15203:11812938-11813265 - CGCTGCTCCAGCGGAGAATTTCCCCTTCTGCACCATTAAGCCCAATGAGAATAAGTATTAC------------------------------------------CAATTACC-ATATCTATATACATATACATGTACATATATATATATATATATATATATATATATATATCTATGTATATGTATATGTATATATAT-AGC-GCCGCTGGCAAATATTTATTGCA---------------------------ATAGCAATTTGCGTTGCCTTTTCGGATAATCATTGTAATCAATGGCATTTGAA--CAATTTTGTT-----------------------------------------GCTGTTGTTGCCTTTGCCGCAGCTTCCAAGT-----------------------------------------------------------------------------------------------------------------GGGCGTGTTGCGCACCGTCTCTCAGGCAATGGCAATT-TGTCGAATCTAGTTGCAG----
droWil2 scf2_1100000004909:3258280-3258346 - CGCTGCCCCCGCGGAGAATTTCCCCTTCTGCACGATTAAGCCCAATGAGAATAAGTATTTC------------------------------------------CAATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group3a:906610-906991 + CGCCGCCCCGGCGGAGAACTTCCCCTTTTGCACGATCAAGCCGAATGAGAATAAGTATTAC------------------------------------------CAATTATC----------------------------------------------------------------------------------CATCGGC--CCGCGGGCC-------CCCAGGGCCCCGCAAAATCCAAAAATCCAGGCGGGGGCAATTT-------CTT------TAATCATTGTAATCAGTAT--TTTGAATATAATTTTTATTCAAGACTTGTCGA---TG--GCAATGGACTGCCCCCAGGAGCGGTCGCCACATCCACA-------------GCCGCTTCTAATTCCAAATTGCTTGCTGGCTCCGCCTGCACTGGACGCGGGGCTGGTCTGGGTCTGGGTCTGGGTCTGGTTCTGGTCCTTCTAAAAAGAAACTATTTCGTTTGGGGCGTGTCGCG-------------GCCTTAGCAATTTTATCAGATCCAGTTTCCAATAT
droPer2 scaffold_15:1989962-1990331 - CGCCGCCCCGGCGGAGAACTTCCCCTTTTGCACGATCAAGCCGAATGAGAATAAGTATTAC------------------------------------------CAATTATC----------------------------------------------------------------------------------CATCGGC--CCGCGGGCC-------CCCAGGGCCCCGCAAAATCCAAAAATCCAGGCGGGGGCAATTT-------CTT------TAATCATTGTAATCAGTAT--TTTGAATATAATTTTTATTCAAGACTTGTCGA---TG--GCAATGGACTGCCCCCAGGAGCAGTCGCCACATCCACA-------------GCCGCTTCTAATTCCAAATTGCTTGCTGGCTCCGCCTGCACTGGACGCGGGGCTGGTCTGGGTCTGGGTC------------TGGTCCTTCTAAAAAGAAACTATTTCGTTTGGGGCGTGTCGCG-------------GCCTTAGCAATTTTATCAGATCCAGTTTCCAATAT
droAna3 scaffold_13337:3499410-3499459 + CGCTGCCCCCGCTGAGAATTTCCCCTTCTGCACCATCAAGCCCAACGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396387:108291-108340 - CGCCGCTCCCGCAGAGAATTTCCCCTTCTGCACCATCAAGCCCAATGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302592:591911-591987 - CGCTGCTCCCGCGGAGAACTTTCCCTTCTGCACCATCAAGCCGAATGATAATAAGTATCCC------------------------------------------CACCAA-TGATAGTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454073:2609916-2609983 + CGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATCCC-------------------------------------------AACAGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491013:529940-530000 + TGCCGCCCCCGCGGAGAATTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000770122:699-767 + TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATC-GTGTTCC-------------------------------------------GGTGCCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301760:5673757-5673986 + CGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATCCCAACCCACTCGCACACATTTGCCCCGGCGCACATGCAGCCGGCCAATTACC-----------------------------------------------------------------------------------AGGCCC----------------------------------------AGCTGCGGGCGGCGGCAATTT-------CCT------CGATCATTGTAATCTTCGC--GTGGAATTTAATTTT-ATGCCCGCCGCTGCGG---CGCAGCAATGGCCT----CCAGGAGCAGCCGC---------C-------------GCCGCTTCTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415872:320646-320706 + TGCCGCCCCCGCGGAGAACTTTCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409032:214395-214455 - TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:9673226-9673286 + TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:9217355-9217415 + TGCCGCCCCCGCGGAGAACTTCCCTTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_15:437125-437185 + TGCCGCCCCCGCGGAGAACTTCCCTTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:18274256-18274316 + TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:5439379-5439439 - TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CGCCGCGCCGGCCGAAAATTTCCCCTTCTGCACCATTAAGCCCAATGAGAATAAGTATTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGCC-------ATTGGA---------------------------GTCGCAATTTGCGTTGCCTCC-----AAATAATTGTAATCA-----------ATGCAATTTTTTG-T--------CCGTTCGGG--GCATTGCATT-------------------------GCCGCAGCTTCCCTGTGTCGCTTCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGCGTGTCCCA-------------ATCTCGGCAATT-TGCCAGATCTAGTTGCAG----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGG................................................................................................................................................................................................................................................................................................................................................................25149.00494800001
.........................................................................................................................................................................................................................................................................................................................................................................................................TTCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGG..........................................................25123.00232200001
.........................................................................................................................................................................................................................................................................................................................................................................................................TTCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGG...........................................................24123.00231800041
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGC...............................................................................................................................................................................................................................................................................................................................................................26122.00222000020
............................................................................................................................................................................................................................................................................................TGTAATCA-----------ATGCAATTTTTTG-T--------CCGT.......................................................................................................................................................................................................................................26121.00212000001
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGG..........................................................24114.00141210001
..........................TCTGCACCATTAAGCCCAATGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.0010600040
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGG...........................................................2319.009800010
..........................TCTGCACCATTAAGCCCAATGAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2619.009700020
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCG.................................................................................................................................................................................................................................................................................................................................................................2417.007700000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GG............................................................2317.007700000
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCC..................................................................................................................................................................................................................................................................................................................................................................2317.007200050
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGCC-------A......................................................................................................................................................................................................................................................................................................................................................2817.007700000
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGCC-------AT.....................................................................................................................................................................................................................................................................................................................................................2916.006600000
...........................................................................................................TACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGG................................................................................................................................................................................................................................................................................................................................................................2415.005500000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GG............................................................2215.005410000
..........................TCTGCACCATTAAGCCCAATGAGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.005000050
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGC........................................................2615.005300020
.........................................................................................................................................................................................................................................................................................................................................................................................................TTCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGG.........................................................2615.005500000
.......................................................TATTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TG.......................................................................................................................................................................................................................................................................................................................................................................2614.004300001
.........................................................TTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGC...................................................................................................................................................................................................................................................................................................................................................................2814.004400000
..........................TCTGCACCATTAAGCCCAATGAGAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004400000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGG.........................................................2513.003300000
....................TCCCCTTCTGCACCATTAAGCCCAATGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.003300000
..........................TCTGCACCATTAAGCCCAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003200010
.............................................................................................................................................................................................................................................................................................................................................................................................TCCCTGTGTCGCTTCTAT---------GTTGGC...................................................................................................................................................2413.003300000
.........................................................TTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCC..................................................................................................................................................................................................................................................................................................................................................................2913.003200010
...........................................................................................................TACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGC...............................................................................................................................................................................................................................................................................................................................................................2513.003300000
....................TCCCCTTCTGCACCATTAAGCCCAATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
.........................................................TTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TG.......................................................................................................................................................................................................................................................................................................................................................................2412.002200000
............................................................................................................................................................................................................................................................................................TGTAATCA-----------ATGCAATTTTTTG-T--------CCG........................................................................................................................................................................................................................................2512.002200000
..................................................ATAAGTATTCC-------------------------------------------AATTACCAAGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
............................................................................................................................................................................................................................................................................................TGTAATCA-----------ATGCAATTTTTTG-T--------CCGTC......................................................................................................................................................................................................................................2712.002100001
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGC...................................................................................................................................................................................................................................................................................................................................................................2212.002100010
...........................................................................................................................................................................................................................................................................................................................................................................................................CTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGG...........................................................2212.002200000
..........................................................TCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCC..................................................................................................................................................................................................................................................................................................................................................................2812.002200000
....................TCCCCTTCTGCACCATTAAGCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.............................................................................................................................................................................................................................................................................................GTAATCA-----------ATGCAATTTTTTG-T--------CCGT.......................................................................................................................................................................................................................................2512.002200000
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGA................................................................................................................................................................................................................................................................................................................................................................2512.002200000
...................................................TAAGTATTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-.........................................................................................................................................................................................................................................................................................................................................................................2812.002200000
..................................................ATAAGTATTCC-------------------------------------------AATTACCAAGAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..........................TCTGCACCATTAAGCCCAATGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000020
.............................................................................................................................................................................................................................................................................................................................................................................................TCCCTGTGTCGCTTCTAT---------GTTGG....................................................................................................................................................2312.002200000
..................TTTCCCCTTCTGCACCATTAAGCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
...................................................TAAGTATTCC-------------------------------------------AATTACCAAGAGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002100010
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGCG.......................................................2712.002200000
...................TTCCCCTTCTGCACCATTAAGCCCAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
...........................CTGCACCATTAAGCCCAATGAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
.........................................................TTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCG....................................................................................................................................................................................................................................................................................................................................................................2712.002200000
..........................TCTGCACCATTAAGCCCAATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
....................................................................................................................................................................................................................................................................................................................................................TTGCATT-------------------------GCCGCAGCTTCCCTC..............................................................................................................................................................................2211.001100000
...........................................................................................................TACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGCC-------AT.....................................................................................................................................................................................................................................................................................................................................................2811.001100000
............................................................................................................................................................................................................................................................................................TGTAATCA-----------ATGCAATTTTTTG-T--------CCGTTC.....................................................................................................................................................................................................................................2811.001100000
..........................................................TCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGC...................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................CTGCACCATTAAGCCCAATGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGCC-------T......................................................................................................................................................................................................................................................................................................................................................2811.001100000
..........................................................................................................................................................................................................................................................................................................................................TCGGG--GCATTGCATT-------------------------GCCGCAGCTTC..................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCGC----------------------------------------------------------------------------GGGGGCGTGTCCCA-------------ATCTCGGC...........................2611.001100000
...............................................................................................................................................................................................................................................................................................AATCA-----------ATGCAATTTTTTG-T--------CCGTC......................................................................................................................................................................................................................................2411.001100000
......GCCGGCCGAAAATTTCCCCTTCTGCACCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
....................TCCCCTTCTGCACCATTAAGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.........................................................................................................ATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGG................................................................................................................................................................................................................................................................................................................................................................2611.001100000
............................TGCACCATTAAGCCCAATGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................T---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGCGTGT....................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCCA-------------ATCTCGGCAATT-TGCCAGATC.............2811.001100000
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGGCC-------.......................................................................................................................................................................................................................................................................................................................................................2711.001100000
..........................................................................................................................................................................................................................................................................................................................TG-T--------CCGTTCGGG--GCATTGCATT-------------------------GCCGCA.......................................................................................................................................................................................2811.001100000
..........................................................................................................TTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCC.....................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..........................................................................................................................................................................................................................................................................................................................TG-T--------CCGTTCGGG--GCATTGCATT-------------------------G............................................................................................................................................................................................2311.001100000
.......................................................TATTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGC......................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................T---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGCGTG.....................................................2511.001100000
..............................................................................................................................................................................................................................................................................................TAATCA-----------ATGCAATTTTTTG-T--------CCGTTCGG...................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................................................TCA-----------ATGCAATTTTTTG-T--------CCGTTCGGG--GCA.............................................................................................................................................................................................................................2911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................TAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGG..........................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGG........................................................2611.001010000
...................................................TAAGTATTCC-------------------------------------------AATTACCAAGAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..........................................................TCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCG.................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGC........................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCGC----------------------------------------------------------------------------GGGGGCGTGTCCCA-------------ATCTCG.............................2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTCTAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------G.............................................................2211.001100000
.............................................................................................................................................................................................................................................................................................GTAATCA-----------ATGCAATTTTTTG-T--------CCG........................................................................................................................................................................................................................................2411.001100000
.........................................................................................................ATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCC..................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................................................TTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-T........................................................................................................................................................................................................................................................................................................................................................................2311.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................TAT---------GTTGGCTGCCGTCGC----------------------------------------------------------------------------GGGGGC........................................................2411.001100000
............................................................................................................ACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGG................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................AAGAGCTGC-----------------------------------------------------------------------------GA-TGCCGCCGG................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................TTGGA---------------------------GTCGCAATTTGCGTC.......................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................TCCCTGTGTCGCTTCTAT---------GTTGGCTG.................................................................................................................................................2611.001100000
..........................................................TCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGC......................................................................................................................................................................................................................................................................................................................................................................2411.001000010
............................................................................................................................................................................................................................................................................................................................................................................................TTCCCTGTGTCGCTTCTAT---------GTTGGCTG.................................................................................................................................................2711.001100000
.........................................................TTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCCT....................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................CATTAAGCCCAATGAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.........................................................TTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-TGCC.....................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....................................................AAGTATTCC-------------------------------------------AATTACCAAGAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................ATAAGTATTCC-------------------------------------------AATTACCAAGAGCTGC-----------------------------------------------------------------------------GA-.........................................................................................................................................................................................................................................................................................................................................................................2911.001100000
............................................................................................................................................................................................................................................................TCGCAATTTGCGTTGCCTCC-----AAATA.......................................................................................................................................................................................................................................................................................2511.001100000
............................................................................................................................................................................................................................................................................................TGTAATCA-----------ATGCAATTTTTTG-T--------CCGTT......................................................................................................................................................................................................................................2711.001100000
....................TCCCCTTCTGCACCATTAAGCCCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................TTCTGCACCATTAAGCCCAATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................ATTAAGCCCAATGAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
droVir3
CGCCGCTCCAGCTGAGAATTTCCCCTTCTGCACCATTAAGCCCAATGAGAATAAGTATTCC-------------------------------------------AATTATC-----------------------------------------------------------------------------------ATCAGCAGCCGCTGGCC-------ATTCCA---------------------------ATCGCAATTTACGTTGCCTTT-----AAATAATTGTAATCAATGGCATTTGAA--CAATTTTTTTTT----TTTTGCGT---T----CAATCGATTGCCT--------------------TGCCGAAGCTTCCAAGAGTTGCTTCTTA---------CTTTGCTGCCGTCGC----------------------------------------------------------------------------GGGGGCGTGGCCCA-------------GTCTCGGCAATT-TGCCGGATCTAGTTGCAG----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........CAGCTGAGAATTTCCCCTTCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
droGri2
CGCTGCTCCAGCGGAGAATTTCCCCTTCTGCACCATTAAGCCCAATGAGAATAAGTATTAC------------------------------------------CAATTACC-ATATCTATATACATATACATGTACATATATATATATATATATATATATATATATATATCTATGTATATGTATATGTATATATAT-AGC-GCCGCTGGCAAATATTTATTGCA---------------------------ATAGCAATTTGCGTTGCCTTTTCGGATAATCATTGTAATCAATGGCATTTGAA--CAATTTTGTT-----------------------------------------GCTGTTGTTGCCTTTGCCGCAGCTTCCAAGT-----------------------------------------------------------------------------------------------------------------GGGCGTGTTGCGCACCGTCTCTCAGGCAATGGCAATT-TGTCGAATCTAGTTGCAG----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CGCTGCCCCCGCGGAGAATTTCCCCTTCTGCACGATTAAGCCCAATGAGAATAAGTATTTC------------------------------------------CAATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................TTCCCCTTCTGCACGATTAAGCCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
....................TCCCCTTCTGCACGATTAAGCCCAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
................................CGATTAAGCCCAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
dp5
CGCCGCCCCGGCGGAGAACTTCCCCTTTTGCACGATCAAGCCGAATGAGAATAAGTATTAC------------------------------------------CAATTATC----------------------------------------------------------------------------------CATCGGC--CCGCGGGCC-------CCCAGGGCCCCGCAAAATCCAAAAATCCAGGCGGGGGCAATTT-------CTT------TAATCATTGTAATCAGTAT--TTTGAATATAATTTTTATTCAAGACTTGTCGA---TG--GCAATGGACTGCCCCCAGGAGCGGTCGCCACATCCACA-------------GCCGCTTCTAATTCCAAATTGCTTGCTGGCTCCGCCTGCACTGGACGCGGGGCTGGTCTGGGTCTGGGTCTGGGTCTGGTTCTGGTCCTTCTAAAAAGAAACTATTTCGTTTGGGGCGTGTCGCG-------------GCCTTAGCAATTTTATCAGATCCAGTTTCCAATATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............GGAGAACTTCCCCTTTTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030201000000
...........CGGAGAACTTCCCCTTTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
...........CGGAGAACTTCCCCTTTTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............GAGAACTTCCCCTTTTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................TCCCCTTTTGCACGATCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................CGATCAAGCCGAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..............................CACGATCAAGCCGAATGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............GAACTTCCCCTTTTGCACGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................TTCCCCTTTTGCACGATCAAGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............................CACGATCAAGCCGAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............GAACTTCCCCTTTTGCACGATCAAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.................ACTTCCCCTTTTGCACGATCAAGCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
........................CTTTTGCACGATCAAGCCGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
CGCCGCCCCGGCGGAGAACTTCCCCTTTTGCACGATCAAGCCGAATGAGAATAAGTATTAC------------------------------------------CAATTATC----------------------------------------------------------------------------------CATCGGC--CCGCGGGCC-------CCCAGGGCCCCGCAAAATCCAAAAATCCAGGCGGGGGCAATTT-------CTT------TAATCATTGTAATCAGTAT--TTTGAATATAATTTTTATTCAAGACTTGTCGA---TG--GCAATGGACTGCCCCCAGGAGCAGTCGCCACATCCACA-------------GCCGCTTCTAATTCCAAATTGCTTGCTGGCTCCGCCTGCACTGGACGCGGGGCTGGTCTGGGTCTGGGTC------------TGGTCCTTCTAAAAAGAAACTATTTCGTTTGGGGCGTGTCGCG-------------GCCTTAGCAATTTTATCAGATCCAGTTTCCAATATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................GACTTGTCGA---TG--GCAATGGACT......................................................................................................................................................................................................................2212.002200000
.............................................................................................................................................................................................................................................................................................................................CAAGACTTGTCGA---TG--GCAATGGACT......................................................................................................................................................................................................................2511.001100000
.........................................................................................................ATTATC----------------------------------------------------------------------------------CATCGGC--CCGCGGGC...............................................................................................................................................................................................................................................................................................................................................................2111.001100000
droAna3
CGCTGCCCCCGCTGAGAATTTCCCCTTCTGCACCATCAAGCCCAACGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................CTGCACCATCAAGCCCAACGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......CCCGCTGAGAATTTCCCCTTCTGCACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..............................CACCATCAAGCCCAACGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................CCCTTCTGCACCATCAAGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
CGCCGCTCCCGCAGAGAATTTCCCCTTCTGCACCATCAAGCCCAATGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CGCTGCTCCCGCGGAGAACTTTCCCTTCTGCACCATCAAGCCGAATGATAATAAGTATCCC------------------------------------------CACCAA-TGATAGTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATCCC-------------------------------------------AACAGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGCCGCCCCCGCGGAGAATTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATC-GTGTTCC-------------------------------------------GGTGCCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATCCCAACCCACTCGCACACATTTGCCCCGGCGCACATGCAGCCGGCCAATTACC-----------------------------------------------------------------------------------AGGCCC----------------------------------------AGCTGCGGGCGGCGGCAATTT-------CCT------CGATCATTGTAATCTTCGC--GTGGAATTTAATTTT-ATGCCCGCCGCTGCGG---CGCAGCAATGGCCT----CCAGGAGCAGCCGC---------C-------------GCCGCTTCTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGCCGCCCCCGCGGAGAACTTTCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................CCATCAAGCCGAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCCCCCGCGGAGAACTTCCCCTTCTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......CCCGCGGAGAACTTCCCCTTCTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCCCTTCTGCACCATCAAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCCTTCTGCACCATCAAGCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACCATCAAGCCGAATGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGAACTTCCCCTTCTGCACCATCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............GGAGAACTTCCCCTTCTGCACCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CTGCACCATCAAGCCGAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCCCGCGGAGAACTTCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCTTCTGCACCATCAAGCCGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCGGAGAACTTCCCCTTCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................ACCATCAAGCCGAATGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AACTTCCCCTTCTGCACCATCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................ACTTCCCCTTCTGCACCATCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
TGCCGCCCCCGCGGAGAACTTCCCTTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............GGAGAACTTCCCTTTCTGCACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
..........GCGGAGAACTTCCCTTTCTGCACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
droSec2
TGCCGCCCCCGCGGAGAACTTCCCTTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........CGCGGAGAACTTCCCTTTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.............................GCACCATCAAGCCGAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..............................CACCATCAAGCCGAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
droYak3
TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................TCTGCACCATCAAGCCGAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............GGAGAACTTCCCCTTCTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
...............GAACTTCCCCTTCTGCACCATCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droEre2
TGCCGCCCCCGCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAATAAGTATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.GCCGCCCCCGCGGAGAACTTCCCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
TGCCGCCCCCGCGGAGAACTTCCCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............................GCACCATCAAGCCGAATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100

Generated: 05/17/2015 at 11:03 PM