ID:

dmo_779

 Coordinate:

scaffold_6473:13921711-13921861 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dmoj_GLEANR_15500:2]; CDS [Dmoj\GI14705-cds]; intron [Dmoj\GI14705-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATCATCAAGTTCTTCCGAGAATCTACAATCGCAGGACGATTCTGAAGATGTAAGTTTAAATAGAAGAGCGAGAGTGAGTGCAGGAGAGAGCGCGCGCTAATAGAATTGCACAGTGGCAACAGTGTTGAATAACGGCACAAGCACGCACACACACTCACAAAATAACTGCAATATTCCTGGCGTTGCACTTGTCCATTGCTGTGTTGTTATTGTTTTTTTCTTTTTTTCCCCTACACTGCAGATTACACTA
**************************************************.................((((((((((.((((((.....(((....))).......)))))).(((((....((((((.....))))))..)).))).....))))).....((((.((((((.........)))))).))))...)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M060
embryo
 M046
female body
 V056
head
..............................CGCAGGACGATTCTGAAGATGT....................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................CGTTGCACTTGTCCAGGCCTGT................................................ 22 3 4 0.50 2 0 2 0 0
....................................................................................................................................................................AACTGCAATAGTCCCGGCCTT.................................................................. 21 3 3 0.33 1 0 1 0 0
......................................................................................................................................................................CATCAATATTCCTGGCGTT.................................................................. 19 2 6 0.17 1 0 0 1 0
..............................................................AGCAGAGCGCGGGTGAGTGCA........................................................................................................................................................................ 21 3 9 0.11 1 1 0 0 0
...............................................................................................................CAGTGGCAATAGTGTGGAGT........................................................................................................................ 20 3 9 0.11 1 0 0 1 0
....................................................................................................................................................................................................TTGCGGTGTGGTTATCGTTTT.................................. 21 3 11 0.09 1 0 0 0 1
.....................................................................................................................................................................................CGTTGCACTTGTCCCCTAC................................................... 19 3 16 0.06 1 0 1 0 0
................................................................................................................................AGTAACGGGACAAGTACG......................................................................................................... 18 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

TTAGTAGTTCAAGAAGGCTCTTAGATGTTAGCGTCCTGCTAAGACTTCTACATTCAAATTTATCTTCTCGCTCTCACTCACGTCCTCTCTCGCGCGCGATTATCTTAACGTGTCACCGTTGTCACAACTTATTGCCGTGTTCGTGCGTGTGTGTGAGTGTTTTATTGACGTTATAAGGACCGCAACGTGAACAGGTAACGACACAACAATAACAAAAAAAGAAAAAAAGGGGATGTGACGTCTAATGTGAT
**************************************************.................((((((((((.((((((.....(((....))).......)))))).(((((....((((((.....))))))..)).))).....))))).....((((.((((((.........)))))).))))...)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body
.........CAAGAAGGCTCTTAGATGTTA............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0
....................................................................................................................................................................................................................................AGGAATGTGACGTCTAATCT... 20 3 4 0.25 1 0 1
....................................................................................................................................................................................................................................AGGAATGTGACGTCTAATC.... 19 3 14 0.07 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:13921661-13921911 - dmo_779 AATCATCAA--------------------GTTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTT----TA--------------------------------AATAG------------------------------------------------------------------------------------A--------AGAGCGAGAGTG--AGTGCAGG-------------AG--------------A--------GAGCGC----GCGCTAATAGAATTGCA--C-------------------------------------------------------------------------------AGTGGCAACAGTGTTGAATAACG----------G---------------------------------------------------------------------CA----CAAGCA--CGC---------------------A------------------------------------------------CACACAC--TCACAAAATAACTGC---------AATATTCCTG---GC--------------------------------------------------------------------------GTTGC--------------------------ACTT--------GTCCATTGCTGTGTTGTTATT----GTTT--TTTT-----------------CTTTT---------------------------------------------------------------------------TTTCC----------CCT-AC-----ACTGCAGATTAC---------AC-----------T-A
droVir3 scaffold_12928:1165908-1166190 + dvi_8386 AATCATCAA--------------------GTTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTG------------------------------------------------------------------------------------------------------------------------TGTGA-------------------G---AG--------TGCGAGAGAGAAC-------------GAGAGAGTGTGTGAGAATAGTCGCACTAATAGAATCTTA--C-------------------------------------------------------------------------------AGCGGCAACAGTGTTGGCTTACG----------G---------------------------------------------------------------------CA----TAGACA--CGC---------------------A------------------------------------------------CACATACAAGCGCAGAATAACTGC---------AATATTCCTGCC-GC--------------------------------------------------------------------------GCTGC--------------------------ACTT--------GTCCATTGCTGTCTTGTTATT----TTTTTTTTTTTTTTTTTTTTTTTTTGTTCTC---------------------------------------------------------------------------TT--CC----------CCT-ATACATAACTGCAGATTAC---------AC-----------T-G
droGri2 scaffold_14853:8377255-8377513 + AATCATCAA--------------------GTTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTTCTTATA--------------------------------GGCGG------------------------------------------------------------------------------------A--------AGAGTGAG------AGT----G-------------AA----T------G------------AGAGC----GCACGAGTATAATTTTG--C-------------------------------------------------------------------------------AGCGGCAACAGTGTTGAATAACG----------A---------------------------------------------------------------------CT----CGGACA--C-----------------------A------------------------------------------------CACAGAT--ACACAGTCTTACTGC---------AATATTCCAG---GC--------------------------------------------------------------------------GTTGC--------------------------ACTT--------GTCCATTGCTGTCTTAATGTT----GGTG--TTTT---------------------TTTTCC---------------------------------------------------------------------T---CCCCCACTTCTCCCC-ATACATAACTGCAGATTAC---------AC-----------T-G
droWil2 scf2_1100000004590:4416147-4416395 - AATAATAAA--------------------TTGGGACTACGTCTACCGAAATTGCA----TGAGCTACTGGACAA-------------------------------------------------------GGCGAACGAGTGGCGAGCCAGTC------------------------------------------------------------------------------------------------G-------------TT----T------G------------GGCGA----GCACAAAGAGAATTTGGGCG-------------------------------------------------------------------------------AGCAACAACACCGTGCAACAACA----------C---------------------------------------------------------------------CG----G--------------------------------GAGC---------------------------------AACT----------------------------------------------------------------------CCATCTGCT------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCTGGTTCAACCGATCTCATTGGCAATCTATTGGGCATCAGCGATCAGGGTATATTGAACAAATTGCTCTCGT--CC----------GCCGAT----------GAG--GCA--------G-CC--AAATTTCT-G
dp5 XL_group1a:7221697-7221877 + AATCATCGA--------------------GCTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTT------------------------------------------------------------------------------------------------------------------------TATGC-------------------T---GA--------TAAAAGCGAGACG------------------------------------------------------------------------------------GATAGAAATGGTTCTTTTTGAATGTG-------------------------------ATAGTGTTGGCAAACGTAATCCTACCA---------------------------------------------------------------------CA----CACACACA---C--------------------A------------------------------------------------CACACAC--ACACAAAT------------------------------------------------------------------------------------------------GGGACTCCTACTGC--------------------------ACTT--------GCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-A
droPer2 scaffold_13:1833203-1833377 + AATCATCGA--------------------GCTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTT------------------------------------------------------------------------------------------------------------------------TATGC-------------------T---GA--------TAAAAGCGAGACG------------------------------------------------------------------------------------GATAGAAATGGTTCTTTTTGAATGTG-------------------------------ACAGTGTTGACAAACGTAATCCTACCA---------------------------------------------------------------------CA----CACACACA---C--------------------A------------------------------------------------CACACAC----AT----------------------------------------------------------------------------------------------------GGGACTCCTACTGC--------------------------ACTT--------GCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-A
droAna3 scaffold_13417:1466908-1467234 + AATAGTCGG--------------------GAAAGACGGAGAGA--------------------G-------------------A--------------GACAACTGTATTGAGAGTTTTATAAACGCCA------GGAGCAA----AGATTCATTTATACAAATATAAAAAACAAAAAAGAAAACAAAAAAAATCATTAATTTTGTTTATATTTTG-------CGAG----AGAG------AGAGAAAG-------------AGAGAGAAACAAA------------TCGAAT----CGTAGAG-AGATCC------------------------------------------------------------------------------------------CAACAGTGATAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATAAGAGAGACACAAGCATACTCCCCACACACTCTTTCAAAAAAAATAACCTCACT--------------TTTCAACTAAATTCAATTT----TTAATTCATTTTTC--------TTTTTAATTG--TAAATTATTTTTTTTTTTT------ATTTCC---------------------------------------------------------------------TT----------------------------------------------------------TT-T
droBip1 scf7180000396428:177442-177661 + GCGGTCCAAGTACGCACGATAACAACAAAAGCC--AAATA------------G------------------CAACAACAACAGGTCACACA------------------------------------------------------------------------------------------------------------------------CACGC-------CAAG----AGAG------AGAGACAGAGTGAGATACAAG-------------GAGA----------------------------------------------------------------------------------------------GAGAGAGCAC----GAAAA--------------CT------------------------------------------------------------------------------------------------------TGT---TGCGTTG-CCAGCAACAGCAA-CAGC---------------------------------AACACTAACAA---------CAGCAACACGACA------GGAGCAACA-TTTGG---CC--------------------------------------------------------------------------AATGC--------------------------ATTT--------GTCA----------------------------------GA-----------------------------------------------------------------------------------------------------------------------CTGCTGT--GT---------TGCCTTAAATTTTT-T
droKik1 scf7180000302621:137417-137553 + ATAAAAAT---AC----------------GCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------ATAGTGTT------GCA----A-------------AA----T------G------------GAA------------------------------------------------------------------------------------------------------------------------------------------G-CATAAATA------------------------------------------------------------TA----TAGG-------CATGTTT-TCAGCAT---TAA-CAAAATTC---------------------------------------------AT--ATAC--------------------------------------------------------------------------------------------------------------------------------------------AGTT--------G--TGTTGTTG--------TGTTCACTTG--TTGTCTTTTTCGTTGTTTTGTTTTG---------------------------------------------------------------------------TTTTGT-------------------------------------------------------TGG
droFic1 scf7180000453948:493721-493931 - AACATCACC--------------------GCCG--CAGCA------------G------------------CAGCAGCAACAGCTAAAGC-------AGAGGAGTGTGCGTGCATGTGAACT-----------------------------------------------------------------------------------------TGTGT-------------------T---GG--------CAACTTCGTTGCG------------------------------------------------------------------------------------TGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------------------ACAGGCGCA-CAGATTTTCCGAGAGAGCC---------------------GCAAAGAACATTTT---------CGCATGCGAA---GT--------------------------------------------------------------------------GTT-------------------------CCCATTT--------GTTCGGTGCTGTGTGTGCGTT----GTTG--TTGTTGCTGTTCTTGCTGT------TGCTGC---------------------------------------------------------------------T-----------------------------------------------G-CT--G------A-T
droEle1 scf7180000490564:2462316-2462488 - TATTTAATG--------------------TTACTTCTATGATCCT---------A----AAGTT-GAAAA-TATTGTAAAAATAATAAAAA----CA--------------------------------------------------------------------------------------------------------------------AACAAA--------AAAAAAAG------AGA----G-------------AA----A------G------------AGAAA-----------------------------------------ACATT-------------------------AAAATGCAAAAAGCAGCTAATTGCAAA--------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAAGCAGCAGCCATTACATAAATGACACAC-------------------------------------ACACACAAGCTAC-A--AAAT-TAT-T
droRho1 scf7180000766946:23526-23752 - AACAACAAC--------------------GGCA---------------------------------------------ACTACAACAACTA----CA--------------------------------------------------------------------------------------------------------------------AAAGAAACAACAAC----AGAA------ACAACAA-CAACAGC-------------------------------------------------------------------------AACT----------------------------------ACAGCAACAACAGCAT----CAAAA--------------T---------------------------------------------------------------------------------------------------------------CAC----CAG----------CAACAACATC---------------------AGC---AGCAACAGCAA---------CACCAA-----CCGAAGCAACAGCAAAG------------------------CTCAGCATGCA---------------------------------------------------AT--TTTTTGTAGTCGCTGCAATGC-----ACTTTGGGTTTTTTTCGTTTTTCCTTTTTTT-----------------------TTAGTTTTTATTTTT---------------------------------------------------------------------------TTTGC----------C--------------------------------------------C-T
droBia1 scf7180000302255:308513-308664 + CGGCAACAA--------------------GGACGTCAAATAGA-------------------GC---------------------------------AAATGGCAGTGGTGACAAATGAAGAGGCGGCG------GCTG----------------------------------------------------------------------------------------------------------------CCAAG-----------------------------------GA----GCACGAACAGAAGACCG--C-------------------------------------------------------------------------------ACCGAC----------------GGACTCCGAATG---------------------------------------------------------------------CA----AAGGCA--AAC---------------------A------------------------------------------------CAAACAC--CGACGAAATCGCAAT---------AATGTTGCCG---GC--------------------------------------------------------------------------GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414560:160386-160559 - AACATGT---------------------------TGAGAGAACGC---------C----CAGCG-GCAATTCGGTGTCTGAGATGAAGGAA----TA--------------------------------ATCAA-CACGCAGCGAAAC-----------------------------------------------------------------------------------------AC--TAAAAAGG-------------CA----A------------------AAAAACA----CACACACAAAA-AACA--C-------------------------------------------------------------------------------ACGAGCAACACT-------------------------------------------------------------------------------------------CA----CAAACA--TAC---------------------A------------------------------------------------CACACAT--ATTCAAGGTGATTTA---------AGTTTTCTAT---GT--------------------------------------------------------------------------ATCGC--------------------------ATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-G
droEug1 scf7180000408176:347324-347525 + TGCACGC-A--------------------GTTC--GCGAGGAGTT---------T----CAAAC-GGAGGACGAGTACGAGGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------------AAGATGAGGCGAAA---ACATTGCACAGGAGCAGCATCAGTAGTTG------------------------CAGC-----AGCAGCAGCAGTAGCAGC---TGCA--------G---------------------------------------------------------------------CA----GCAG-----------------------------CAGCACCCAC---------------------AGCGAC---------------------GACAGCAACACCTC---------GACATCGCTGCCGACACCTCGAC-------------------------------------------------------------------------------------------------------------GTC----------------------------------------------------------------------------------------------------------------------------------------------------------GACTGCAGC--GC---------AGCGATA----GTT-T
dm3 chr3L:17593507-17593664 + AACAACAAT--------------------CTGCATTCACGGCGCA-AAAA----------GTTC-GTTAACATTGAACTACGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAACGAGGCG----------------G--------------------------------------AATACGAAGAGAAAAAT---GCG-------------------------------------------------------------------CATAGGAAAAAATAAAACTGCAG---------------------------------------------------------------------CA----AACTTGAA---AGCACTCGCCAACAACAACAA-CAAC---------------------------------AACAT---------------TTTC-----------------------------A--------------------------------------------------------------------------------------------------------------------------GCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-T
droSim2 2r:11014758-11014935 - ACTAACAGC--------------------AAACATATGAGCAGCA---------A----CAACA-GCAG-ACGCTACAACAGCAGCAACAC--------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGAGC-------------------------------------------------------------------------AACAT----------------------------------GAGCAAACACAGCAG----CAACA--------------TT------------------------------------------------------------------------------------------------------GCT---AGCAAAC-GCA-------------------ACAAAGGCAGCAGC---------------AACATT--------------ACGAACAACAACTGC---------A-----------AACACATCAGCAACAACTCAGGCTACA------------------------------------------------------------------------------------------------------------------------------------------------------ATAGCTG---------------------------------------------------------------------------------------------------------C---------AA-----------C-A
droSec2 scaffold_3:6835681-6835861 - CAGCGATCG--------------------ACTT---GGAGAC-----------------TAATT-GTGGGCAGAAAGCAAAAAAACAGCTG----CG--------------------------------------------------------------------------------------------------------------------AC--------------------TGAG--GGAAAAGG-------------AG--------------A--------GAGAACA----CATGC------------------------------------------------------TTCAACA---AGAAGTGTAATTGCAT----TCAGTTGGCAGCGGCAACAGCAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCA----------GCAGCAACTAGCTGC---------AACT-TTAAC---GC--------------------------------------------------------------------------ATTGC--------------------------AATG--------AACAATTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-G
droYak3 3R:21478294-21478469 + GAGCAATTT--------------------GTATTTTAGTAGT--A-TA-T----TTCTTTACGC-GCGT-GAGAGTGTGCGTGTGTATGTGTGTGTG--------------------------------AGTGA------------------------------------------------------------------------------------A--------TGAGTAAG---------------------------TGTGTGTAAGTGT------------GTGAAT----GTGATGA-TGAACCGAA--C-------------------------------------------------------------AGCGT-----------------GCAACAAGAATAAAAAACG----------A---------------------------------------------------------------------A--------------------------------------------------------------------------------------TGCCAAAAAGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAC-------------------------------------ACAAACAAAAAAC-----------A-A
droEre2 scaffold_4690:9676757-9676899 - GATAACAAA--------------------GGAG--CAGAGAATAG----------------------------------------------------------------------------------------------------AAT-----------------------------------------------------------------------------------------AT--AAAAAATA-------------CA----------------------------------------------------------------------------------------------------------------------------------------------------AAATACA----------AAAATAAGCAAGAAGGACGAAGGTCGAAGCAGGAAGCAAGTAGAGACGGAATTTGTTATCATCTTGAAAACGCGCACACGCA--CAC---------------------A------------------------------------------------CATAGAC--ACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AATCATCAA--------------------GTTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTT----TA--------------------------------AATAG------------------------------------------------------------------------------------A--------AGAGCGAGAGTG--AGTGCAGG-------------AG--------------A--------GAGCGC----GCGCTAATAGAATTGCA--C-------------------------------------------------------------------------------AGTGGCAACAGTGTTGAATAACG----------G---------------------------------------------------------------------CA----CAAGCA--CGC---------------------A------------------------------------------------CACACAC--TCACAAAATAACTGC---------AATATTCCTG---GC--------------------------------------------------------------------------GTTGC--------------------------ACTT--------GTCCATTGCTGTGTTGTTATT----GTTT--TTTT-----------------CTTTT---------------------------------------------------------------------------TTTCC----------CCT-AC-----ACTGCAGATTAC---------AC-----------T-ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................C-GCAGGACGATTCTGAAGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droVir3
AATCATCAA--------------------GTTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTG------------------------------------------------------------------------------------------------------------------------TGTGA-------------------G---AG--------TGCGAGAGAGAAC-------------GAGAGAGTGTGTGAGAATAGTCGCACTAATAGAATCTTA--C-------------------------------------------------------------------------------AGCGGCAACAGTGTTGGCTTACG----------G---------------------------------------------------------------------CA----TAGACA--CGC---------------------A------------------------------------------------CACATACAAGCGCAGAATAACTGC---------AATATTCCTGCC-GC--------------------------------------------------------------------------GCTGC--------------------------ACTT--------GTCCATTGCTGTCTTGTTATT----TTTTTTTTTTTTTTTTTTTTTTTTTGTTCTC---------------------------------------------------------------------------TT--CC----------CCT-ATACATAACTGCAGATTAC---------AC-----------T-GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................GCAGGACGATTCTGAAGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
...........................................CT---------A----CAATC-GCAGGACGATTCTGAAGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000001000000000000000000
...........................................CT---------A----CAATC-GCAGGACGATTCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010000000000000000000000000000000000000000000000000000000000
...............................................................C-GCAGGACGATTCTGAAGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAGTGTTGGCTTACG----------G---------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
....................................................................GGACGATTCTGAAGATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000001000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----TTTTTTTTTTTTTTTT..........................................................................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT----TTTTTTTTTTTTTTTTTT........................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----TTTTTTTTTTTTTTTTTTT.......................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
droGri2
AATCATCAA--------------------GTTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTTCTTATA--------------------------------GGCGG------------------------------------------------------------------------------------A--------AGAGTGAG------AGT----G-------------AA----T------G------------AGAGC----GCACGAGTATAATTTTG--C-------------------------------------------------------------------------------AGCGGCAACAGTGTTGAATAACG----------A---------------------------------------------------------------------CT----CGGACA--C-----------------------A------------------------------------------------CACAGAT--ACACAGTCTTACTGC---------AATATTCCAG---GC--------------------------------------------------------------------------GTTGC--------------------------ACTT--------GTCCATTGCTGTCTTAATGTT----GGTG--TTTT---------------------TTTTCC---------------------------------------------------------------------T---CCCCCACTTCTCCCC-ATACATAACTGCAGATTAC---------AC-----------T-GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AATAATAAA--------------------TTGGGACTACGTCTACCGAAATTGCA----TGAGCTACTGGACAA-------------------------------------------------------GGCGAACGAGTGGCGAGCCAGTC------------------------------------------------------------------------------------------------G-------------TT----T------G------------GGCGA----GCACAAAGAGAATTTGGGCG-------------------------------------------------------------------------------AGCAACAACACCGTGCAACAACA----------C---------------------------------------------------------------------CG----G--------------------------------GAGC---------------------------------AACT----------------------------------------------------------------------CCATCTGCT------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCTGGTTCAACCGATCTCATTGGCAATCTATTGGGCATCAGCGATCAGGGTATATTGAACAAATTGCTCTCGT--CC----------GCCGAT----------GAG--GCA--------G-CC--AAATTTCT-GSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................GTGGCGAGCCAGTC------------------------------------------------------------------------------------------------G-------------TT----T------G------------GGCGA----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00400400
.........................................CTACCGAAATTGCA----TGAGCTACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201100
......................................................A----TGAGCTACTGGACAA-------------------------------------------------------GGCGAACGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00210100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTATTGGGCATCAGC.............................................................................................1812.00201010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCGATCAGGGTATA.................................................................................1911.00110000
.......AA--------------------TTGGGACTACGTCTACCGAAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...............................................AAATTGCA----TGAGCTACTGGACAA-------------------------------------------------------GGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACA----------C---------------------------------------------------------------------CG----G--------------------------------GAGC---------------------------------AACT----------------------------------------------------------------------C........................................................................................................................................................................................................................................................................................................2211.00101000
............................................CCGAAATTGCA----TGAGCTACTGGACAA-------------------------------------------------------GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
...................................................................................................................................................CAGTC------------------------------------------------------------------------------------------------G-------------TT----T------G------------GGCGA----GCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.........................................CTACCGAAATTGCA----TGAGCTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.....................................................CA----TGAGCTACTGGACAA-------------------------------------------------------GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.....................................................CA----TGAGCTACTGGACAA-------------------------------------------------------GGCGAACGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCAATCTATTGGGCATCAGC.............................................................................................2311.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCATCAGCGATCAGGGTA...................................................................................2211.00100001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------AACT----------------------------------------------------------------------CCATCTGCT------------------------------------------------------------------------------------------------------------------------------------------------------GTG.......................................................................................................................................1911.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTATTGGGCATCAGCGAT..........................................................................................2111.00100100
...................................................................................................................................................................................................................................................................................................................AATTTGGGCG-------------------------------------------------------------------------------AGCAACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGTATATTGAACAAATT......................................................................2011.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................CA----------C---------------------------------------------------------------------CG----G--------------------------------GAGC---------------------------------AACT----------------------------------------------------------------------CCATCTGC.................................................................................................................................................................................................................................................................................................2211.00100100
............................................................................................................................................GGCGAGCCAGTC------------------------------------------------------------------------------------------------G-------------TT----T------G------------GGCGA----G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGGCATCAGCGATCAG.......................................................................................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATTGAACAAATTGCTCTCGT--............................................................2411.00100100
...............................................................CTACTGGACAA-------------------------------------------------------GGCGAACGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATTGAACAAATTGCTCTCGT--CC----------GCC.............................................2911.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATCTATTGGGCATCAGC.............................................................................................2011.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAACACCGTGCAACAACA----------C---------------------------------------------------------------------CG----G--------------------------------GAGC---------------------------------...................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
......................................................A----TGAGCTACTGGACAA-------------------------------------------------------GGCGAACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAATCTATTGGGCATCAGCG............................................................................................2211.00101000
......................................................A----TGAGCTACTGGACAA-------------------------------------------------------GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------AACT----------------------------------------------------------------------CCATCTGCT------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCTGGTT................................................................................................................................2411.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT----------------------------------------------------------------------CCATCTGCT------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCTG...................................................................................................................................1811.00110000
dp5
AATCATCGA--------------------GCTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTT------------------------------------------------------------------------------------------------------------------------TATGC-------------------T---GA--------TAAAAGCGAGACG------------------------------------------------------------------------------------GATAGAAATGGTTCTTTTTGAATGTG-------------------------------ATAGTGTTGGCAAACGTAATCCTACCA---------------------------------------------------------------------CA----CACACACA---C--------------------A------------------------------------------------CACACAC--ACACAAAT------------------------------------------------------------------------------------------------GGGACTCCTACTGC--------------------------ACTT--------GCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................C-GCAGGACGATTCTGAAGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000002
.......................................GAATCT---------A----CAATC-GCAGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
...............................................................C-GCAGGACGATTCTGAAGATGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
...CATCGA--------------------GCTCTTCCGAGAATCT---------A----CAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----CACACACA---C--------------------A------------------------------------------------CACACAC--ACACAAAT------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................26200.0510010000000
droPer2
AATCATCGA--------------------GCTCTTCCGAGAATCT---------A----CAATC-GCAGGACGATTCTGAAGATGTAAGTT------------------------------------------------------------------------------------------------------------------------TATGC-------------------T---GA--------TAAAAGCGAGACG------------------------------------------------------------------------------------GATAGAAATGGTTCTTTTTGAATGTG-------------------------------ACAGTGTTGACAAACGTAATCCTACCA---------------------------------------------------------------------CA----CACACACA---C--------------------A------------------------------------------------CACACAC----AT----------------------------------------------------------------------------------------------------GGGACTCCTACTGC--------------------------ACTT--------GCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AATAGTCGG--------------------GAAAGACGGAGAGA--------------------G-------------------A--------------GACAACTGTATTGAGAGTTTTATAAACGCCA------GGAGCAA----AGATTCATTTATACAAATATAAAAAACAAAAAAGAAAACAAAAAAAATCATTAATTTTGTTTATATTTTG-------CGAG----AGAG------AGAGAAAG-------------AGAGAGAAACAAA------------TCGAAT----CGTAGAG-AGATCC------------------------------------------------------------------------------------------CAACAGTGATAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATAAGAGAGACACAAGCATACTCCCCACACACTCTTTCAAAAAAAATAACCTCACT--------------TTTCAACTAAATTCAATTT----TTAATTCATTTTTC--------TTTTTAATTG--TAAATTATTTTTTTTTTTT------ATTTCC---------------------------------------------------------------------TT----------------------------------------------------------TT-TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................TATTTTG-------CGAG----AGAG------AGAGAAAG-------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
...............................................................G-------------------A--------------GACAACTGTATTGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
................................AGACGGAGAGA--------------------G-------------------A--------------GACAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..TAGTCGG--------------------GAAAGACGGAGAGA--------------------G-------------------A--------------GAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACTCCCCACACACT..................................................................................................................................................................................................................................................................2011.001100000
.............................GAAAGACGGAGAGA--------------------G-------------------A--------------GA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
...AGTCGG--------------------GAAAGACGGAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGTGATAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATAAG..............................................................................................................................................................................................................................................................................................1811.001000001
.................................................................................................................AGTTTTATAAACGCCA------GGAGCAA----AGATTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
...................................................................................................................................................................................................................TTTTG-------CGAG----AGAG------AGAGAAAG-------------AGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.......................................................................................................................ATAAACGCCA------GGAGCAA----AGATTCATTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
..................................................................................................................GTTTTATAAACGCCA------GGAGCAA----A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
..TAGTCGG--------------------GAAAGACGGAGAGA--------------------G-------------------A--------------GACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..........................................................................................................................................................................AACAAAAAAGAAAACAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251010000
..........................................................................................................................................................................AACAAAAAAGAAAACAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.201010000
.............................................................................................................................................................................AAAAAAGAAAACAAAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.131010000
..............................................................................................................................................................................AAAAAGAAAACAAAAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.111010000
......................................................................................................................................................................AAAAAACAAAAAAGAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000
droBip1
GCGGTCCAAGTACGCACGATAACAACAAAAGCC--AAATA------------G------------------CAACAACAACAGGTCACACA------------------------------------------------------------------------------------------------------------------------CACGC-------CAAG----AGAG------AGAGACAGAGTGAGATACAAG-------------GAGA----------------------------------------------------------------------------------------------GAGAGAGCAC----GAAAA--------------CT------------------------------------------------------------------------------------------------------TGT---TGCGTTG-CCAGCAACAGCAA-CAGC---------------------------------AACACTAACAA---------CAGCAACACGACA------GGAGCAACA-TTTGG---CC--------------------------------------------------------------------------AATGC--------------------------ATTT--------GTCA----------------------------------GA-----------------------------------------------------------------------------------------------------------------------CTGCTGT--GT---------TGCCTTAAATTTTT-TSizeHit CountTotal NormTotal
No Reads
droKik1
ATAAAAAT---AC----------------GCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------ATAGTGTT------GCA----A-------------AA----T------G------------GAA------------------------------------------------------------------------------------------------------------------------------------------G-CATAAATA------------------------------------------------------------TA----TAGG-------CATGTTT-TCAGCAT---TAA-CAAAATTC---------------------------------------------AT--ATAC--------------------------------------------------------------------------------------------------------------------------------------------AGTT--------G--TGTTGTTG--------TGTTCACTTG--TTGTCTTTTTCGTTGTTTTGTTTTG---------------------------------------------------------------------------TTTTGT-------------------------------------------------------TGGSizeHit CountTotal NormTotal
No Reads
droFic1
AACATCACC--------------------GCCG--CAGCA------------G------------------CAGCAGCAACAGCTAAAGC-------AGAGGAGTGTGCGTGCATGTGAACT-----------------------------------------------------------------------------------------TGTGT-------------------T---GG--------CAACTTCGTTGCG------------------------------------------------------------------------------------TGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------------------ACAGGCGCA-CAGATTTTCCGAGAGAGCC---------------------GCAAAGAACATTTT---------CGCATGCGAA---GT--------------------------------------------------------------------------GTT-------------------------CCCATTT--------GTTCGGTGCTGTGTGTGCGTT----GTTG--TTGTTGCTGTTCTTGCTGT------TGCTGC---------------------------------------------------------------------T-----------------------------------------------G-CT--G------A-TSizeHit CountTotal NormTotal
No Reads
droEle1
TATTTAATG--------------------TTACTTCTATGATCCT---------A----AAGTT-GAAAA-TATTGTAAAAATAATAAAAA----CA--------------------------------------------------------------------------------------------------------------------AACAAA--------AAAAAAAG------AGA----G-------------AA----A------G------------AGAAA-----------------------------------------ACATT-------------------------AAAATGCAAAAAGCAGCTAATTGCAAA--------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAAGCAGCAGCCATTACATAAATGACACAC-------------------------------------ACACACAAGCTAC-A--AAAT-TAT-TSizeHit CountTotal NormTotal
No Reads
droRho1
AACAACAAC--------------------GGCA---------------------------------------------ACTACAACAACTA----CA--------------------------------------------------------------------------------------------------------------------AAAGAAACAACAAC----AGAA------ACAACAA-CAACAGC-------------------------------------------------------------------------AACT----------------------------------ACAGCAACAACAGCAT----CAAAA--------------T---------------------------------------------------------------------------------------------------------------CAC----CAG----------CAACAACATC---------------------AGC---AGCAACAGCAA---------CACCAA-----CCGAAGCAACAGCAAAG------------------------CTCAGCATGCA---------------------------------------------------AT--TTTTTGTAGTCGCTGCAATGC-----ACTTTGGGTTTTTTTCGTTTTTCCTTTTTTT-----------------------TTAGTTTTTATTTTT---------------------------------------------------------------------------TTTGC----------C--------------------------------------------C-TSizeHit CountTotal NormTotal
No Reads
droBia1
CGGCAACAA--------------------GGACGTCAAATAGA-------------------GC---------------------------------AAATGGCAGTGGTGACAAATGAAGAGGCGGCG------GCTG----------------------------------------------------------------------------------------------------------------CCAAG-----------------------------------GA----GCACGAACAGAAGACCG--C-------------------------------------------------------------------------------ACCGAC----------------GGACTCCGAATG---------------------------------------------------------------------CA----AAGGCA--AAC---------------------A------------------------------------------------CAAACAC--CGACGAAATCGCAAT---------AATGTTGCCG---GC--------------------------------------------------------------------------GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AACATGT---------------------------TGAGAGAACGC---------C----CAGCG-GCAATTCGGTGTCTGAGATGAAGGAA----TA--------------------------------ATCAA-CACGCAGCGAAAC-----------------------------------------------------------------------------------------AC--TAAAAAGG-------------CA----A------------------AAAAACA----CACACACAAAA-AACA--C-------------------------------------------------------------------------------ACGAGCAACACT-------------------------------------------------------------------------------------------CA----CAAACA--TAC---------------------A------------------------------------------------CACACAT--ATTCAAGGTGATTTA---------AGTTTTCTAT---GT--------------------------------------------------------------------------ATCGC--------------------------ATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GSizeHit CountTotal NormTotal
No Reads
droEug1
TGCACGC-A--------------------GTTC--GCGAGGAGTT---------T----CAAAC-GGAGGACGAGTACGAGGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------------AAGATGAGGCGAAA---ACATTGCACAGGAGCAGCATCAGTAGTTG------------------------CAGC-----AGCAGCAGCAGTAGCAGC---TGCA--------G---------------------------------------------------------------------CA----GCAG-----------------------------CAGCACCCAC---------------------AGCGAC---------------------GACAGCAACACCTC---------GACATCGCTGCCGACACCTCGAC-------------------------------------------------------------------------------------------------------------GTC----------------------------------------------------------------------------------------------------------------------------------------------------------GACTGCAGC--GC---------AGCGATA----GTT-TSizeHit CountTotal NormTotal
No Reads
dm3
AACAACAAT--------------------CTGCATTCACGGCGCA-AAAA----------GTTC-GTTAACATTGAACTACGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAACGAGGCG----------------G--------------------------------------AATACGAAGAGAAAAAT---GCG-------------------------------------------------------------------CATAGGAAAAAATAAAACTGCAG---------------------------------------------------------------------CA----AACTTGAA---AGCACTCGCCAACAACAACAA-CAAC---------------------------------AACAT---------------TTTC-----------------------------A--------------------------------------------------------------------------------------------------------------------------GCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------------CA----AACTTGAA---AGCACTCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
ACTAACAGC--------------------AAACATATGAGCAGCA---------A----CAACA-GCAG-ACGCTACAACAGCAGCAACAC--------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGAGC-------------------------------------------------------------------------AACAT----------------------------------GAGCAAACACAGCAG----CAACA--------------TT------------------------------------------------------------------------------------------------------GCT---AGCAAAC-GCA-------------------ACAAAGGCAGCAGC---------------AACATT--------------ACGAACAACAACTGC---------A-----------AACACATCAGCAACAACTCAGGCTACA------------------------------------------------------------------------------------------------------------------------------------------------------ATAGCTG---------------------------------------------------------------------------------------------------------C---------AA-----------C-ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
CAGCGATCG--------------------ACTT---GGAGAC-----------------TAATT-GTGGGCAGAAAGCAAAAAAACAGCTG----CG--------------------------------------------------------------------------------------------------------------------AC--------------------TGAG--GGAAAAGG-------------AG--------------A--------GAGAACA----CATGC------------------------------------------------------TTCAACA---AGAAGTGTAATTGCAT----TCAGTTGGCAGCGGCAACAGCAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCA----------GCAGCAACTAGCTGC---------AACT-TTAAC---GC--------------------------------------------------------------------------ATTGC--------------------------AATG--------AACAATTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GAGCAATTT--------------------GTATTTTAGTAGT--A-TA-T----TTCTTTACGC-GCGT-GAGAGTGTGCGTGTGTATGTGTGTGTG--------------------------------AGTGA------------------------------------------------------------------------------------A--------TGAGTAAG---------------------------TGTGTGTAAGTGT------------GTGAAT----GTGATGA-TGAACCGAA--C-------------------------------------------------------------AGCGT-----------------GCAACAAGAATAAAAAACG----------A---------------------------------------------------------------------A--------------------------------------------------------------------------------------TGCCAAAAAGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAC-------------------------------------ACAAACAAAAAAC-----------A-ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GATAACAAA--------------------GGAG--CAGAGAATAG----------------------------------------------------------------------------------------------------AAT-----------------------------------------------------------------------------------------AT--AAAAAATA-------------CA----------------------------------------------------------------------------------------------------------------------------------------------------AAATACA----------AAAATAAGCAAGAAGGACGAAGGTCGAAGCAGGAAGCAAGTAGAGACGGAATTTGTTATCATCTTGAAAACGCGCACACGCA--CAC---------------------A------------------------------------------------CATAGAC--ACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:01 PM