ID:

dmo_740

 Coordinate:

scaffold_6473:11119771-11119878 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dmoj\GI14826-cds]; exon [dmoj_GLEANR_15614:1]; exon [dmoj_GLEANR_15614:2]; CDS [Dmoj\GI14826-cds]; intron [Dmoj\GI14826-in]; Antisense to intron [Dmoj\GI15802-in]

Repeatable elements

NameClassFamilyStrand
(TA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------##################################################
AGGATTTGGATGATAAGCGCTCATGGAGTCCCGAAGAGACTAAAAATGGCGTAAGTTATTTACAGAAAGAAAAAAAAAGAAATAAATAAAATGAGAAATGTATTTAAACATTTTCAACATCTGTATATATATTTGTATGTATATATATATATATATAGAGCACCACATCGACTATCATAGCACAGCCCATGGATGATGTGGGCAGCAC
**************************************************((((.....))))............................((((((.(((......)))))))))....((((((((((((.((((....)))).))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V049
head
.............................................................................................................ATTTTTAACATCTGTATATAT.............................................................................. 21 1 1 20.00 20 19 1 0
.............................................................................................................ATTTTTAACATCTGTATATATAA............................................................................ 23 2 1 15.00 15 14 1 0
.............................................................................................................ATTTTTAACATCTGTATATATA............................................................................. 22 1 1 11.00 11 10 1 0
............................................................................................................AATTTTTAACATCTGTATATATA............................................................................. 23 2 1 6.00 6 6 0 0
.............................................................................................................ATTTTTAACATCTGTATAT................................................................................ 19 1 2 5.00 10 10 0 0
...............................................................................................................TTTTAACATCTGTATATATA............................................................................. 20 1 2 4.00 8 8 0 0
..............................................................................................................TTTTTAACATCTGTATATATA............................................................................. 21 1 1 4.00 4 4 0 0
...............................................................................................................TTTTAACATCTGTATATATAA............................................................................ 21 2 8 1.63 13 13 0 0
..............................................................................................................TTTTTAACATCTGTATATAT.............................................................................. 20 1 4 1.25 5 5 0 0
.............................................................................................................ATTTTTAACATCTGTATATATAAAT.......................................................................... 25 3 4 1.25 5 5 0 0
......................ATGGAGTCCCGAAGAGACTAAAAATGGC.............................................................................................................................................................. 28 0 1 1.00 1 0 1 0
..............................................................................................................TTTTTAACATCTGTATATATAA............................................................................ 22 2 6 1.00 6 6 0 0
..................................................................................................................................................................................AGCACAGCCCAGGGATGATGTGG....... 23 1 1 1.00 1 1 0 0
..................GCTCATGGAGTCCCGAAGAGACTA...................................................................................................................................................................... 24 0 1 1.00 1 0 1 0
...........GATAAGCGCTCATGGAGTCCCGAAGA........................................................................................................................................................................... 26 0 1 1.00 1 1 0 0
....TTTGGATGATAAGCGCTCAT........................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0
..................GCTCATGGAGTCCCGAAGAGA......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
...........................................................................................................GAATTTTTAACATCTGTATATAT.............................................................................. 23 3 17 0.94 16 16 0 0
...........................................................................................................GAATTTTTAACATCTGTATATATA............................................................................. 24 3 10 0.90 9 9 0 0
................................................................................................................TTTAACATCTGTATATATA............................................................................. 19 1 7 0.86 6 5 0 1
............................................................................................................AATTTTTAACATCTGTATAT................................................................................ 20 2 19 0.84 16 16 0 0
............................................................................................................AATTTTTAACATCTGTATATATAA............................................................................ 24 3 8 0.75 6 6 0 0
............................................................................................................AATTTTTAACATCTGTATATAT.............................................................................. 22 2 5 0.60 3 3 0 0
............................................................................................................AATTTTTAACATCTGTATATA............................................................................... 21 2 11 0.45 5 4 1 0
..............................................................................................................TTTTTAACATCGGTATATATA............................................................................. 21 2 3 0.33 1 1 0 0
.............................................................................................................ATTTTTAACATCTGTATA................................................................................. 18 1 4 0.25 1 1 0 0
.............................................................................................................ATTTTTAACATCTGTATATATAAA........................................................................... 24 3 14 0.21 3 3 0 0
...............................................................................................................TTTTAACATCTGTATATAT.............................................................................. 19 1 5 0.20 1 1 0 0
..............................................................................................................TTTTTAACATCTGTATAT................................................................................ 18 1 6 0.17 1 1 0 0
..............................................................................................................TTTTTAACATCTGTATATA............................................................................... 19 1 6 0.17 1 1 0 0
..............................................................................................................CTTTTAACATCTGTATATATA............................................................................. 21 2 7 0.14 1 1 0 0
.................................................................................................................TTAACATCTGTATATATA............................................................................. 18 1 11 0.09 1 1 0 0
................................................................................................................TTTAACATCTGTATATAT.............................................................................. 18 1 12 0.08 1 1 0 0
..............................................................................................................ATTTTAACATCTGTATATATA............................................................................. 21 2 15 0.07 1 1 0 0
............................................................................................................AATTTTTAACATCTGTATA................................................................................. 19 2 20 0.05 1 1 0 0
..............................................................................................................TTTTTAACATCTGTATATATAAAT.......................................................................... 24 3 20 0.05 1 1 0 0

Anti-sense strand reads

TCCTAAACCTACTATTCGCGAGTACCTCAGGGCTTCTCTGATTTTTACCGCATTCAATAAATGTCTTTCTTTTTTTTTCTTTATTTATTTTACTCTTTACATAAATTTGTAAAAGTTGTAGACATATATATAAACATACATATATATATATATATATCTCGTGGTGTAGCTGATAGTATCGTGTCGGGTACCTACTACACCCGTCGTG
**************************************************((((.....))))............................((((((.(((......)))))))))....((((((((((((.((((....)))).))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body
.............................................................................................................TAAAAATTGTAGACATATATA.............................................................................. 21 1 1 3.00 3 3 0
............................................................................................................TTAAAAATTGTAGACATATATAT............................................................................. 23 2 1 2.00 2 2 0
...............................................................................................................AAAATTGTAGACATATATAT............................................................................. 20 1 2 2.00 4 2 2
...............................................................................................................AAAATTGTAGACATATATA.............................................................................. 19 1 5 1.40 7 5 2
............................................................................................................TTAAAAATTGTAGACATATATA.............................................................................. 22 2 5 1.20 6 6 0
.............................................................................................................TAAAAATTGTAGACATATATATT............................................................................ 23 2 1 1.00 1 1 0
.............................................................................................................TAAAAATTGTAGACATATA................................................................................ 19 1 2 1.00 2 2 0
..............................................................................................................AAAAATTGTAGACATATATAT............................................................................. 21 1 1 1.00 1 1 0
............................................................................................................TTAAAAATTGTAGACATATATATT............................................................................ 24 3 8 0.50 4 4 0
...............................................................................................................AAAATTGTAGACATATATATT............................................................................ 21 2 8 0.50 4 3 1
............................................................................................................TTAAAAATTGTAGACATATAT............................................................................... 21 2 11 0.27 3 3 0
..............................................................................................................AAAAATTGTAGACATATATATT............................................................................ 22 2 6 0.17 1 1 0
............................................................................................................TTAAAAATTGTAGACATATA................................................................................ 20 2 19 0.16 3 3 0
................................................................................................................AAATTGTAGACATATATATT............................................................................ 20 2 20 0.15 3 3 0
................................................................................................................AAATTGTAGACATATATAT............................................................................. 19 1 7 0.14 1 1 0
...............................................................................................................AAAATTGTAGACATATAT............................................................................... 18 1 8 0.13 1 1 0
............................................................................................................TTAAAAATTGTAGACATAT................................................................................. 19 2 20 0.10 2 2 0
.......................ACCACGTGGCTTCTCTGA....................................................................................................................................................................... 18 3 19 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:11119721-11119928 - dmo_740 AGGATTTGGATGATAAGCGCTCATGGAGTCCCGAAGAGACTAAAAATGGCGTAAGTTAT-T----------------------TAC-------------------------------------------------------------AGAAAGAAAAAAAAAG--A----AATAAATAAAATGAGA-AATGTA----------TTTAAACATTTTCA---ACATCT-----------GT------AT------------------------------A-------TATATTTGTA--TGTATAT--------A----T--------------------------------------ATATATATATAGAGCACCACATCGACTATCATAGCACAGCCCATGGATGATGTGGGCAGCAC
droVir3 scaffold_12970:10338732-10338894 + AGGATTTGGATGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGTCCA-T----------------------GGC-------------------------------------------------------AAA------GCA--------------------------------------------------TTTAAAC---------------------------------------------------------------------TTC--AT------------GTTAAACCAAACACTTGCGA--------------------------------------ATTCGTACACAGAGCACCACATCGACTATCATAGCACAGCCCATGGATGATGTGGGCAGCAC
droGri2 scaffold_15203:6634294-6634537 + AGGATTTGGATGATAAGCGCTCCTGGAGCCCCGATGAAACCAAAAATGGCGTAAGCAGT-ACAATTGAAAGCATTGCATTTT--ACACGAACTAATCAAACGATCTTGCATATCTACATCT-----------------------CTCTA-------------------------------------------------------------------------------------------------T------------------------------A-------TATATATGTA--TGTATGT--------A----TGTATGTATGTATGTATGTATGTATGTATGTATGTATGTACATTTGTATAGAGCACCACATCGACCATCATAGCACAGCCCATAGATAATGTGGGCAGCAC
droWil2 scf2_1100000004590:3082052-3082243 + AGGATTTGGATGATAAACGCTCTTGGAGTCCCGATGAGACCAAAAATGGGGTAAGTAAC-CAC----------------CCC-CAA-----------------------------CCC---CTCCACCCACCATTCAATGTAAA------GAGTTAAA--AAG--A----G--------------------------------------------------TTTCACTAACTG--------------------------------------------------------------------------AACAAAAACAA--------------------------------------AAACATTTTCAGAGTACTACATCAACGATAATAGCTCAGCCCTTGGATGATGTGGGCAGTAC
dp5 XL_group1a:3870324-3870507 + AGGACTTGGATGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGTACT-TTT----------------CTG--------------------------------------------------------------TCCAGCGAGAGAGA--GAGAGAGAGAG----------CGAGATGAT---------------------------------------------------------------------------------GTACAG-----------AG-AT------------CATCCCTTTCCCC--------------------------------------TCTCAACCGCAGAGCACCACATCGACCATCATTGCCCAGCCCATGGATGATGTGGGTACAAC
droPer2 scaffold_11:431818-431995 + AGGACTTGGATGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGTACT-TTT----------------CTG--------------------------------------------------------------TCCAGCGAGAGAGA--GAG--A----G----------CGAGATGAT---------------------------------------------------------------------------------GTACAG-----------AG-AT------------CATCCCTTTCCCC--------------------------------------TCTCAACCGCAGAGCACCACATCGACCATCATTGCCCAGCCCATGGATGATGTGGGTACAAC
droAna3 scaffold_13417:1343080-1343247 + AGGATCTGGACGACAAGCGATCGTGGAGTCCCGAGGAGACCAAGAACGGCGTGCGTAAC-G----------------------CA----------------------------------------------------------------------------------------------------------------------TCTGACCGCCACCA---ATGTCCTTGACTG---GCCACTATA------------------------------------------TA-----------------------ATCCTA--------------------------------------TATCTTCCGCAGAGCACCACATCCACCATCATCGCCCAGCCCCTGGACGAGGTGGGCAGCAC
droBip1 scf7180000395187:31920-32090 + AAGATCTGGACGACAAGCGTTCGTGGAGTCCCGAGGAGACCAAGAATGGCGTGCGTACC-ATC----------------AGG--------------------------------------------------------------CTCATC-------------------------------------------------------TGATCGCGA------GTGTCCTTGATTCCACGGCATTATA---------------------------------------------------------------------TCCT--------------------------------------TATCTTCCATAGAGCACCACATCCACCATCATTGCCCAGCCGCTGGACGAGGTGGGCAGTAC
droKik1 scf7180000302517:226087-226250 + AGGACCTGGACGATAAGCGCTCTTGGAGCCCCGAGGAGACCAAGAATGGCGTAAGTCTA-C----------------------TGA-----------------------------CC---------------------------------------------------------------------------------------------TTGACCTCTT----------------------------GATTTTGACCA----A--CTAAT----G-------------------A--TTTTTT--------T----A--------------------------------------TTCTTCTGCCAGAGCACCACTTCCACCATTATTGCCCAGCCCCTGGACGAGGTGGGCAGCAC
droFic1 scf7180000453882:600796-600965 + AGGATCTGGACGATAAGCGCTCCTGGAGCCCCGAGGAGACCAAAAACGGCGTAAGACCT-T----------------------GAC--------------------------------------------------------------CAA------------------------------------------ATTGCACAGT--------------GTG----------------------------TCAAGTGGATG----ATACT----AATAG-----------AG-A---------------------ACCCT--------------------------------------TCTCCATTTCAGAGCACCACCTCGACCATCATTGCCCAGCCGCTGGACGAGGTCGGCACCAC
droEle1 scf7180000490214:632808-632982 - AGGATTTGGACGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGATCT-G----------------------CAC-------------------------------------------------------------ACAA------------------------------------------ACTGGAC-CC--------------GTT----------------------------TTAATGGCCGAAAAGAGAGTAATGTAATT-----------AA-AT------------TGGC--------------------------------------------------GATTTTTAGAGCACCACTTCGACCATCATTGCCCAGCCGCTGGATGAGGTGGGTAGCAC
droRho1 scf7180000761121:2600-2768 - AGGACTTGGACGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGACCT-G----------------------CAC-----------------------------ACA---T------------------------------------------------------------------------GTTGAC-CC--------------GTT----------------------------CTAATGGGCCA----AGAGTAAT----GC-----------CC-A---------------------TTGCC--------------------------------------CCTCGATTCTAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGACGAGGTGGGCAGCAC
droBia1 scf7180000302126:3680023-3680186 + AGGATCTGGACGACAAGCGCTCCTGGAGCCCCGAGGAGACCAAGAATGGCGTAAGACCG-CGT----------------CTCCCAC-----------------------------ACA---TCCCAT----------------------------------------------------------------------------------------------------------------------AC------------------------------ATCATCCAT----------ATGTATAA--------C----CAAT-----------------------------------CCTCTATTGCAGAGCACCACCTCGACCATCATTGCCCAGCCGCTGGATGAAGTGGGCACCAC
droTak1 scf7180000415394:578320-578478 + AGGATTTGGATGATAAGCGCTCCTGGAGCCCCGAGGAGACCAAGAATGGCGTAAGAAAT-C----------------------AG-----------------------------------------------------------CTCATAA-----AA--AAGTTC---------------CTAAGTA----------------------------------------------------ATATAAT------------------------ATA-----------------TT-------C-------------------------------------------------------TACCGATTCCAGAGCACCACCTCGACCATCATTGCCCAGCCGCTGGATGATGTGGGCTCCAC
droEug1 scf7180000409901:67380-67549 + AGGATTTGGACGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGTTTT-C----------------------AG-----------------------------------------------------------CTCATCAATATAGC-----------------------CTATGTTAC---------------------------------------------------------------------------------ATACAT-----------AG-AT------------ATACCAACATCCC--------------------------------------ATTTGATTCCAGAGCACTACATCTACTATCATTGCCCAGCCGCTGGATGATGTGGGCTCCAC
dm3 chrX:10733439-10733595 + AGGATTTGGATGACAAACGCTCGTGGAGTCCCGAGGAGACCAAGAATGGCGTACGACACCCTC---------------------------------------------------------------------------------CTC--------------------------------------------------------------------------------------------------AT------------------------------AATAT--ATGTAGTATCAAATGTCTAA--------C----A--------------------------------------CCTCGTTTCCAGAGCACCACATCAACAATCATTGCCCAGCCGCTGGATGAGGTGGGCACCAC
droSim2 x:10191289-10191446 + AGGATTTGGATGACAAACGCTCGTGGAGTCCCGAGGAGACCAAGAATGGCGTACGATAT-C----------------------CGA-----------------------------ACA------------------------------TT-----------------------------------------------------------------------------------------------ATATATA---------------------------------TATAGCATCTAATGTCTAA--------C----A--------------------------------------CCTCGTTTCCAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGATGAGGTGGGCTCCAC
droSec2 scaffold_15:1437083-1437252 + AGGATTTGGATGACAAACGCTCGTGGAGTCCCGAGGAGACCAAGAATGGCGTACGACAT-C----------------------CGA-----------------------------ACACCC-----------------------CTCAACA-----------------------------------------------------------------------------------------ATATA-TATATA---------------------------------TATAGCATCTAATGTCTAA--------C----A--------------------------------------CCTCGTTTCCAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGATGAGGTGGGCTCCAC
droYak3 X:19304898-19305057 + AGGATTTGGATGACAAACGCTCCTGGAGTCCCGAGGAGACCAAGAATGGCGTACGACAC-G----------------------CAA-----------------------------ATA---TTCCAC----------------------------------------------------------------------------------------------------------------------AT------------------------------AATATCCAT-----ATCAAATGACTAA--------C----A--------------------------------------TTTCGTTTGCAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGATGAGGTGGGCTCCAC
droEre2 scaffold_4690:4395588-4395747 - AGGATTTGGACGACAAACGCTCCTGGAGTCCCGAGGAGACCAAGAATGGCGTAGGACAC-T----------------------CAT-----------------------------ACC--------------------------------------------------------------------------------------------CCCACCA--------------------CC------AT------------------------------AA------TATAGTACCAA--GTCTAA--------C----A--------------------------------------TCTCGTTTCCAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGACGAAGTGGGCTCCAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGGATTTGGATGATAAGCGCTCATGGAGTCCCGAAGAGACTAAAAATGGCGTAAGTTAT-T----------------------TAC-------------------------------------------------------------AGAAAGAAAAAAAAAG--A----AATAAATAAAATGAGA-AATGTA----------TTTAAACATTTTCA---ACATCT-----------GT------AT------------------------------A-------TATATTTGTA--TGTATAT--------A----T--------------------------------------ATATATATATAGAGCACCACATCGACTATCATAGCACAGCCCATGGATGATGTGGGCAGCACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................ATGGAGTCCCGAAGAGACTAAAAATGGC................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
..................GCTCATGGAGTCCCGAAGAGACTA........................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...........GATAAGCGCTCATGGAGTCCCGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....TTTGGATGATAAGCGCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..................GCTCATGGAGTCCCGAAGAGA...........................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droVir3
AGGATTTGGATGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGTCCA-T----------------------GGC-------------------------------------------------------AAA------GCA--------------------------------------------------TTTAAAC---------------------------------------------------------------------TTC--AT------------GTTAAACCAAACACTTGCGA--------------------------------------ATTCGTACACAGAGCACCACATCGACTATCATAGCACAGCCCATGGATGATGTGGGCAGCACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........GATAAGCGCTCCTGGAGTCCC..................................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000010000000000000000000000000000000000000000
...............................CGAGGAGACCAAAAATGGCGT..............................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000002000000000000000000000000000000000000000000
....................TCCTGGAGTCCCGAGGAGACC.........................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000100000000000000000000000000000100
....................................................................................................................................................................................................................................................................................................................................................................ATTCGTACACAGAGCACCACA.........................................2112.002000000000000000000000000000000100100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CCAAACACTTGCGA--------------------------------------ATTCGTA.......................................................2112.002001000000000000010000000000000000000000000000000000000000000000
.........ATGATAAGCGCTCCTGGAGTC....................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000100000000000000000000010
.........................................................................................................................................................................................................................................................................................................................TGCGA--------------------------------------ATTCGTACACAGAGCA..............................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTCGTACACAGAGCACCACATT.......................................2211.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CACATCGACTATCATAGCACG........................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CGACTATCATAGCACAGCCCATGGAT..............2611.001000000000000000000000000000000010000000000000000000000000000000
......................CTGGAGTCCCGAGGAGACC.........................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
......................................ACCAAAAATGGCGTAAGTCCA-......................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GCACAGCCCATGGATGATGTG........2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TATCATAGCACAGCCCATGG................2011.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCACAGCCCATGGATGATGTG........2211.001000000010000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATGGATGATGTGGGCAGCAT2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................TTGCGA--------------------------------------ATTCGTACACAGAGCG..............................................2211.001001000000000000000000000000000000000000000000000000000000000000
....TTTGGATGATAAGCGCTCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CGA--------------------------------------ATTCGTACACAGAGCACC............................................2111.001000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TCATAGCACAGCCCATGGATGATGT.........2511.001001000000000000000000000000000000000000000000000000000000000000
AGGATTTGGATGATAAGCGCT.............................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GCACAGCCCATGGATGATGTGG.......2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCCATGGATGATGTGGGCAGC..2111.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GTACACAGAGCACCACATCGA.....................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATGTGGGCAGCAC1911.001001000000000000000000000000000000000000000000000000000000000000
........GATGATAAGCGCTCCTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................A--------------------------------------ATTCGTACACAGAGCACCACA.........................................2211.001000000000000000000000000000010000000000000000000000000000000000
..........TGATAAGCGCTCCTGGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000100000000000000000000000000000
.......................TGGAGTCCCGAGGAGACTT........................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................GGAGTCCCGAGGAGACCAAAAAT...................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............ATAAGCGCTCCTGGAGTCCC..................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................TCCTGGAGTCCCGAGGAGACCA........................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
................................GAGGAGACCAAAAATGGCGTG.............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TCATAGCACAGCCCATGGAT..............2011.001000000000000000100000000000000000000000000000000000000000000000
..............AAGCGCTCCTGGAGTCCCG.................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
.........................GAGTCCCGAGGAGACCAAAA.....................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................CACATCGACTATCATAGCACA........................2111.001000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ATCGACTATCATAGCACAGCCC....................2211.001000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATGGATGATGTGGGCAGCA.1911.001000000010000000000000000000000000000000000000000000000000000000
........GATGATAAGCGCTCCTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
..GATTTGGATGATAAGCGCTCCT..........................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................CA-T----------------------GGC-------------------------------------------------------AAA------GCA--------------------------------------------------TTTAAAC---------------------------------------------------------------------TT.........................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TATCATAGCACAGCCCATG.................1911.001001000000000000000000000000000000000000000000000000000000000000
.......GGATGATAAGCGCTCCTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GACTATCATAGCACAGCCCAT..................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................AGACCAAAAATGGCGTAAGT..........................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ACAGCCCATGGATGATGTGG.......2011.001001000000000000000000000000000000000000000000000000000000000000
droGri2
AGGATTTGGATGATAAGCGCTCCTGGAGCCCCGATGAAACCAAAAATGGCGTAAGCAGT-ACAATTGAAAGCATTGCATTTT--ACACGAACTAATCAAACGATCTTGCATATCTACATCT-----------------------CTCTA-------------------------------------------------------------------------------------------------T------------------------------A-------TATATATGTA--TGTATGT--------A----TGTATGTATGTATGTATGTATGTATGTATGTATGTATGTACATTTGTATAGAGCACCACATCGACCATCATAGCACAGCCCATAGATAATGTGGGCAGCACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........TGATAAGCGCTCCTGGAGCCCCGAT...............................................................................................................................................................................................................................................................................................................................................................................................2511.00110
.........................................AAAAATGGCGTAAGCAGT-A.....................................................................................................................................................................................................................................................................................................................................................................1911.00110
droWil2
AGGATTTGGATGATAAACGCTCTTGGAGTCCCGATGAGACCAAAAATGGGGTAAGTAAC-CAC----------------CCC-CAA-----------------------------CCC---CTCCACCCACCATTCAATGTAAA------GAGTTAAA--AAG--A----G--------------------------------------------------TTTCACTAACTG--------------------------------------------------------------------------AACAAAAACAA--------------------------------------AAACATTTTCAGAGTACTACATCAACGATAATAGCTCAGCCCTTGGATGATGTGGGCAGTACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....TTGGATGATAAACGCTCTTGGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100
.................................................................................................................................................................................................................................................................................................................................................................................GTACTACATCAACGATAATAGCTC.........................2412.00201100
................................GATGAGACCAAAAATGGGA...............................................................................................................................................................................................................................................................................................................................................................................1912.00200200
.....................CTTGGAGTCCCGATGAGACCAAAAATG..................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
....TTTGGATGATAAACGCTCTTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
..............AAACGCTCTTGGAGTCCCGATGA.............................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................GATAATAGCTCAGCCCTTGGATGATGT.........2711.00100100
.................................................................................................................................................................................................................................................................................................................................................................................GTACTACATCAACGATAATAGCT..........................2311.00100100
.............TAAACGCTCTTGGAGTCCCGA................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................AATAGCTCAGCCCTTGGATGATGTG........2511.00101000
...............AACGCTCTTGGAGTCCCGATG..............................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................CAACGATAATAGCTCAGCCCTTGGA...............2511.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAGCCCTTGGATGATGT.........2111.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGCCCTTGGATGATGTGG.......1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................TAATAGCTCAGCCCTTGGA...............1911.00101000
........................................................................................................................................................................................................................................................................................................................................................................................ATCAACGATAATAGCTCAGCCCTTGGA...............2711.00101000
.........................GAGTCCCGATGAGACCAAAAATGGGA...............................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...........................GTCCCGATGAGACCAAAAATGGGA...............................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCCTTGGATGATGTGGG......2111.00101000
............ATAAACGCTCTTGGAGTCCCG.................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
................................................................................................................................................................................................................................................................................................................................................................................................TAATAGCTCAGCCCTTGGATGATG..........2411.00110000
................................................................................................................................................................................................................................................................................................................................................................................................TAATAGCTCAGCCCTTGGATGATGT.........2511.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................AATAGCTCAGCCCTTGGATGATGT.........2411.00100100
dp5
AGGACTTGGATGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGTACT-TTT----------------CTG--------------------------------------------------------------TCCAGCGAGAGAGA--GAGAGAGAGAG----------CGAGATGAT---------------------------------------------------------------------------------GTACAG-----------AG-AT------------CATCCCTTTCCCC--------------------------------------TCTCAACCGCAGAGCACCACATCGACCATCATTGCCCAGCCCATGGATGATGTGGGTACAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........GATAAGCGCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2613.0030300000000
..................GCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................1913.0030300000000
...............................................................................CTG--------------------------------------------------------------TCCAGCGAGAGAGA--GAGA..............................................................................................................................................................................................................................................................2112.0020100001000
...................................................................................................................................................................................................................................................................................................................TCCCTTTCCCC--------------------------------------TCTCAACCGCA...................................................2212.0020000000020
............ATAAGCGCTCCTGGAGTCCCGA................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................TCCTGGAGTCCCGAGGAGACCAAAA.....................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCCAGCCCATGGATGATGTGG.......2511.0010100000000
...................................................................................................................................................................................................................................................................................................AT------------CATCCCTTTCCCC--------------------------------------TCTCA.........................................................2011.0010100000000
.............TAAGCGCTCCTGGAGTCCCGA................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....CTTGGATGATAAGCGCTCCT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................GCTCCTGGAGTCCCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................ATCGACCATCATTGCCCAGCCC....................2211.0010100000000
......................................................GTACT-TTT----------------CTG--------------------------------------------------------------TCCAGCGAGA........................................................................................................................................................................................................................................................................2111.0010100000000
...........GATAAGCGCTCCTGGAGTCCCGA................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..GACTTGGATGATAAGCGCTC............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........GATAAGCGCTCCTGGAGTCCCGAGGAG............................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.....................................................AGTACT-TTT----------------CTG--------------------------------------------------------------TCCAGCG...........................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................CGACCATCATTGCCCAGC......................1811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CATTGCCCAGCCCATGGATGATGTGG.......2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGCCCATGGATGATGTGG.......1811.0010100000000
.........................GAGTCCCGAGGAGACCAAAAATGGC................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...ACTTGGATGATAAGCGCTCCTT.........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..GACTTGGATGATAAGCGCTCCTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........ATGATAAGCGCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.GGACTTGGATGATAAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........GATGATAAGCGCTCCTGG........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.....TTGGATGATAAGCGCTCCTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................................T-TTT----------------CTG--------------------------------------------------------------TCCAGCGAGAGAGA--GA................................................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATGGATGATGTGGGTACA..1811.0010100000000
................GCGCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........TGATAAGCGCTCCTGGAGTC....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................CTG--------------------------------------------------------------TCCAGCGAGAGAGA--GAGT..............................................................................................................................................................................................................................................................2111.0010100000000
.......GGATGATAAGCGCTCCTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...ACTTGGATGATAAGCGCTCCT..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................AGAGAGAGAG----------CGAGATGAT---------------------------------------------------------------------------------...................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................CGACCATCATTGCCCAGCCCAT..................2211.0010100000000
............ATAAGCGCTCCTGGAGTCCCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
droPer2
AGGACTTGGATGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGTACT-TTT----------------CTG--------------------------------------------------------------TCCAGCGAGAGAGA--GAG--A----G----------CGAGATGAT---------------------------------------------------------------------------------GTACAG-----------AG-AT------------CATCCCTTTCCCC--------------------------------------TCTCAACCGCAGAGCACCACATCGACCATCATTGCCCAGCCCATGGATGATGTGGGTACAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.GGACTTGGATGATAAGCGCT.............................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........GATGATAAGCGCTCCTGG........................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........GATAAGCGCTCCTGGAGTCCCGA................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..............AAGCGCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....CTTGGATGATAAGCGCTCCTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droAna3
AGGATCTGGACGACAAGCGATCGTGGAGTCCCGAGGAGACCAAGAACGGCGTGCGTAAC-G----------------------CA----------------------------------------------------------------------------------------------------------------------TCTGACCGCCACCA---ATGTCCTTGACTG---GCCACTATA------------------------------------------TA-----------------------ATCCTA--------------------------------------TATCTTCCGCAGAGCACCACATCCACCATCATCGCCCAGCCCCTGGACGAGGTGGGCAGCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................CCACCATCATCGCCCAGCCCC...................2112.002200000
..................GATCGTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
..............AAGCGATCGTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2312.002100010
....................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAGCCCCTGGACGAGGT.........2112.002000020
...........GACAAGCGATCGTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2612.002100010
..........CGACAAGCGATCGTGGAGTCCC..................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................................................................................................................................TCCTA--------------------------------------TATCTTCCGCAGAGC...............................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................CACCACATCCACCATCATCGC...........................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................CCACATCCACCATCATCGCCC.........................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................ATCATCGCCCAGCCCCTGGAC..............2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................TCATCGCCCAGCCCCTGGACG.............2111.001100000
................................GAGGAGACCAAGAACGGCA...............................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................................................TCCTA--------------------------------------TATCTTCCGCAGAGCA..............................................2111.001100000
droBip1
AAGATCTGGACGACAAGCGTTCGTGGAGTCCCGAGGAGACCAAGAATGGCGTGCGTACC-ATC----------------AGG--------------------------------------------------------------CTCATC-------------------------------------------------------TGATCGCGA------GTGTCCTTGATTCCACGGCATTATA---------------------------------------------------------------------TCCT--------------------------------------TATCTTCCATAGAGCACCACATCCACCATCATTGCCCAGCCGCTGGACGAGGTGGGCAGTACSizeHit CountTotal NormTotal
No Reads
droKik1
AGGACCTGGACGATAAGCGCTCTTGGAGCCCCGAGGAGACCAAGAATGGCGTAAGTCTA-C----------------------TGA-----------------------------CC---------------------------------------------------------------------------------------------TTGACCTCTT----------------------------GATTTTGACCA----A--CTAAT----G-------------------A--TTTTTT--------T----A--------------------------------------TTCTTCTGCCAGAGCACCACTTCCACCATTATTGCCCAGCCCCTGGACGAGGTGGGCAGCACSizeHit CountTotal NormTotal
No Reads
droFic1
AGGATCTGGACGATAAGCGCTCCTGGAGCCCCGAGGAGACCAAAAACGGCGTAAGACCT-T----------------------GAC--------------------------------------------------------------CAA------------------------------------------ATTGCACAGT--------------GTG----------------------------TCAAGTGGATG----ATACT----AATAG-----------AG-A---------------------ACCCT--------------------------------------TCTCCATTTCAGAGCACCACCTCGACCATCATTGCCCAGCCGCTGGACGAGGTCGGCACCACSizeHit CountTotal NormTotal
No Reads
droEle1
AGGATTTGGACGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGATCT-G----------------------CAC-------------------------------------------------------------ACAA------------------------------------------ACTGGAC-CC--------------GTT----------------------------TTAATGGCCGAAAAGAGAGTAATGTAATT-----------AA-AT------------TGGC--------------------------------------------------GATTTTTAGAGCACCACTTCGACCATCATTGCCCAGCCGCTGGATGAGGTGGGTAGCACSizeHit CountTotal NormTotal
No Reads
droRho1
AGGACTTGGACGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGACCT-G----------------------CAC-----------------------------ACA---T------------------------------------------------------------------------GTTGAC-CC--------------GTT----------------------------CTAATGGGCCA----AGAGTAAT----GC-----------CC-A---------------------TTGCC--------------------------------------CCTCGATTCTAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGACGAGGTGGGCAGCACSizeHit CountTotal NormTotal
No Reads
droBia1
AGGATCTGGACGACAAGCGCTCCTGGAGCCCCGAGGAGACCAAGAATGGCGTAAGACCG-CGT----------------CTCCCAC-----------------------------ACA---TCCCAT----------------------------------------------------------------------------------------------------------------------AC------------------------------ATCATCCAT----------ATGTATAA--------C----CAAT-----------------------------------CCTCTATTGCAGAGCACCACCTCGACCATCATTGCCCAGCCGCTGGATGAAGTGGGCACCACSizeHit CountTotal NormTotal
No Reads
droTak1
AGGATTTGGATGATAAGCGCTCCTGGAGCCCCGAGGAGACCAAGAATGGCGTAAGAAAT-C----------------------AG-----------------------------------------------------------CTCATAA-----AA--AAGTTC---------------CTAAGTA----------------------------------------------------ATATAAT------------------------ATA-----------------TT-------C-------------------------------------------------------TACCGATTCCAGAGCACCACCTCGACCATCATTGCCCAGCCGCTGGATGATGTGGGCTCCACSizeHit CountTotal NormTotal
No Reads
droEug1
AGGATTTGGACGATAAGCGCTCCTGGAGTCCCGAGGAGACCAAAAATGGCGTAAGTTTT-C----------------------AG-----------------------------------------------------------CTCATCAATATAGC-----------------------CTATGTTAC---------------------------------------------------------------------------------ATACAT-----------AG-AT------------ATACCAACATCCC--------------------------------------ATTTGATTCCAGAGCACTACATCTACTATCATTGCCCAGCCGCTGGATGATGTGGGCTCCACSizeHit CountTotal NormTotal
No Reads
dm3
AGGATTTGGATGACAAACGCTCGTGGAGTCCCGAGGAGACCAAGAATGGCGTACGACACCCTC---------------------------------------------------------------------------------CTC--------------------------------------------------------------------------------------------------AT------------------------------AATAT--ATGTAGTATCAAATGTCTAA--------C----A--------------------------------------CCTCGTTTCCAGAGCACCACATCAACAATCATTGCCCAGCCGCTGGATGAGGTGGGCACCACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........GATGACAAACGCTCGTGGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCCAGCCGCTGGATGAGGTGGGCAA...2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
.................................................................................................................................................................................................................................................................................................................................................................................................CATTGCCCAGCCGCTGGATGAGGT.........2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000
..........TGACAAACGCTCGTGGAGTCC...................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAGCCGCTGGATGAGGT.........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ATGTCTAA--------C----A--------------------------------------CCTCGTTTCCAG..................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGCCGCTGGATGAGGTGGG......1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCCAGCCGCTGGATGAGGT.........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000
...............................CGAGGAGACCAAGAATGGC................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCCAGCCGCTGGATGAG...........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAGCCGCTGGATGAG...........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000
...............AACGCTCGTGGAGTCCCGAG...............................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...............AACGCTCGTGGAGTCCCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
..........TGACAAACGCTCGTGGAGTC....................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACAAACGCTCGTGGAGTCCCGAGGAG............................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.........................................AAGAATGGCGTACGACACCCT....................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
........GATGACAAACGCTCGTGGAGTCT...................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................C----A--------------------------------------CCTCGTTTCCAGAGCACCA...........................................2111.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................C----A--------------------------------------CCTCGTTTCCAGAGCACCC...........................................2111.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACAAACGCTCGTGGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAAACGCTCGTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................ACGCTCGTGGAGTCCCGAG...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CCCAGCCGCTGGATGAGGTGG.......2111.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTGCCCAGCCGCTGGATGAGGT.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGAGGTGGGCACC..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CCCAGCCGCTGGATGAGGTGGT......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............AACGCTCGTGGAGTCCCGA................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................CAAGAATGGCGTACGACACCC.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACAAACGCTCGTGGAGTCCC..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCGAGGAGACCAAGAATGGCG...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AAATGTCTAA--------C----A--------------------------------------CCTCGTTTCCAG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GTGGAGTCCCGAGGAGACCAAGAATGGC................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............AACGCTCGTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................GTGGAGTCCCGAGGAGACC.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCTAA--------C----A--------------------------------------CCTCGTTTCCAGAG................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............CAAACGCTCGTGGAGTCCCGA................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTC---------------------------------------------------------------------------------CTC--------------------------------------------------------------------------------------------------AT------------------------------AATAT--ATGTAGT...............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................CGAGGAGACCAAGAATGGCGT..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GATTTGGATGACAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGTCCCGAGGAGACCAAGAATG..................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCAACAATCATTGCCCAGCCGC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................GTGGAGTCCCGAGGAGACCAA.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAACGCTCGTGGAGTCCCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................CGCTCGTGGAGTCCCGAGGAGACC.........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCTGGATGAGGTGGG......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................CGTGGAGTCCCGAGGAGACCA........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGGATGAGGTGGGCAC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGGATGACAAACGCTCGTGGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........ATGACAAACGCTCGTGGAGTC....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......................TGGAGTCCCGAGGAGACCAAG......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................CCCAGCCGCTGGATGAGGT.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................CGTGGAGTCCCGAGGAGACCAG.......................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCTGGATGAGGTGGGCAC...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GAGACCAAGAATGGCGTACG...........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGAGGAGACCAAGAATGGCGTA.............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................TTTCCAGAGCACCACATCAA.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AT--ATGTAGTATCAAATGTCTA...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................AA--------C----A--------------------------------------CCTCGTTTCCAGAG................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................AGTCCCGAGGAGACCAAGAATGGC................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
droSim2
AGGATTTGGATGACAAACGCTCGTGGAGTCCCGAGGAGACCAAGAATGGCGTACGATAT-C----------------------CGA-----------------------------ACA------------------------------TT-----------------------------------------------------------------------------------------------ATATATA---------------------------------TATAGCATCTAATGTCTAA--------C----A--------------------------------------CCTCGTTTCCAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGATGAGGTGGGCTCCACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................CACCACATCGACCATCAG..............................1830.33100001000000000000
droSec2
AGGATTTGGATGACAAACGCTCGTGGAGTCCCGAGGAGACCAAGAATGGCGTACGACAT-C----------------------CGA-----------------------------ACACCC-----------------------CTCAACA-----------------------------------------------------------------------------------------ATATA-TATATA---------------------------------TATAGCATCTAATGTCTAA--------C----A--------------------------------------CCTCGTTTCCAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGATGAGGTGGGCTCCACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................CATTGCCCAGCCGCTGGATGAGGT.........2413.0030300
........GATGACAAACGCTCGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................ATCATTGCCCAGCCGCTGGATGAGGT.........2611.0010100
.....TTGGATGACAAACGCTCGT..........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
droYak3
AGGATTTGGATGACAAACGCTCCTGGAGTCCCGAGGAGACCAAGAATGGCGTACGACAC-G----------------------CAA-----------------------------ATA---TTCCAC----------------------------------------------------------------------------------------------------------------------AT------------------------------AATATCCAT-----ATCAAATGACTAA--------C----A--------------------------------------TTTCGTTTGCAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGATGAGGTGGGCTCCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................CATTGCCCAGCCGCTGGATGA............2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GACCATCATTGCCCAGCCGCTGGATGAG...........2811.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................CATCGACCATCATTGCCCAGCCG....................2311.00101000000000
.......................TGGAGTCCCGAGGAGACCAAGAATGGCAG..............................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCCAGCCGCTGGATGAGGT.........2311.00100000010000
...........GACAAACGCTCCTGGAGTCCCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...............AACGCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.GGATTTGGATGACAAACGCTCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droEre2
AGGATTTGGACGACAAACGCTCCTGGAGTCCCGAGGAGACCAAGAATGGCGTAGGACAC-T----------------------CAT-----------------------------ACC--------------------------------------------------------------------------------------------CCCACCA--------------------CC------AT------------------------------AA------TATAGTACCAA--GTCTAA--------C----A--------------------------------------TCTCGTTTCCAGAGCACCACATCGACCATCATTGCCCAGCCGCTGGACGAAGTGGGCTCCACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............AAACGCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
........GACGACAAACGCTCCTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................GACCATCATTGCCCAGCCGCTGGA...............2411.0011000000
..........CGACAAACGCTCCTGGAGTCCCGAG...............................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..GATTTGGACGACAAACGCTCCT..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
............ACAAACGCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..........CGACAAACGCTCCTGGAGTCCCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........ACGACAAACGCTCCTGGAGTCCCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCTGGACGAAGTGGGC.....2111.0011000000

Generated: 05/17/2015 at 10:57 PM