ID:

dmo_739

 Coordinate:

scaffold_6473:11116248-11116398 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.4 -23.4 -23.1

Flybase annnotation

CDS [Dmoj\GI15802-cds]; exon [dmoj_GLEANR_16512:4]; intron [Dmoj\GI15802-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCATTGCCGGCTGCCCGGCTGATCGCAGCTATGCCGCTGACATACTCCTCCTGCAAACCGAGACTGCACACTTCAGAGAGAGTCCTGAGCCCGAGCCCGAATCCTCGTACTTCTATCTCTACCGCATTAGCTACATGTGGTATGCACCCATTGGCTTCGTCGTTTCCTTGTTTGGCGGCTGGCTGCTCTCGTACTGCATGGCCGCCTTCAAGTGGGACAACAATCGTCGCATCTACCACGACGCCGATTGC
*************************************************************..((((.((...(((.((((.....(((((((((........))))............((((((((.......))))))))..........))))).....)))).)))..))))))************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
..............................................................................................................................................................GTCGTTTCCTTGTTTGGCGG......................................................................... 20 0 1 2.00 2 2 0 0
.............................................................GACTGCACACTTCAGAGAGA.......................................................................................................................................................................... 20 0 1 1.00 1 1 0 0
.................................................................................................................................................................GTTTCCTTGTTTGGCGGC........................................................................ 18 0 1 1.00 1 1 0 0
..................CTGATCGCAGCTATGCCGCTGACATACT............................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0
..................................................................................................................................................................CTACCTTGTTTGGCGGCTG...................................................................... 19 2 1 1.00 1 1 0 0
.................................................................................................................................................................................................................................GTCGCATCTACCACGACGC....... 19 0 1 1.00 1 1 0 0
......................................GACATACTCCTCCTGCAAACCGA.............................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0
.....................................................................................................................................................ATTGGCTTCGTCGTTTCCTTGTTTGGCG.......................................................................... 28 0 1 1.00 1 1 0 0
........................................................................................................................................................GGCTTCGTCGTTTCCTTGTTTGGC........................................................................... 24 0 1 1.00 1 1 0 0
........................................................................................................................................GTGGTATGCACCCATTGGCTTCGTC.......................................................................................... 25 0 1 1.00 1 1 0 0
..........................................................................................................................................................................................................................AACAATCGTCGCATCTACCACGACGCC...... 27 0 1 1.00 1 1 0 0
........................................................................................................................................................GGCTTCGTCGTTTCCTTGTTTGGCGGC........................................................................ 27 0 1 1.00 1 1 0 0
........................................................................................................................................................................................................................ATAACAATCGACGCATCTACCAG............ 23 3 1 1.00 1 1 0 0
.................................................................................................................................................................................GCTGGCTGCTCTCGTACTGC...................................................... 20 0 1 1.00 1 1 0 0
...........................................ACTCCTCCTGCAAACCGA.............................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0
............................CTATGCCGCTGACATACTC............................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0
.................................................................................................................................................................GTTTCCTTGTTTGGCGGCT....................................................................... 19 0 1 1.00 1 1 0 0
.........................................................................................................................................................................................................................CAACAATCGTCGCATCTACCACGACGCC...... 28 0 1 1.00 1 1 0 0
................................................................................................................................................................................GGCTGGCTGCTCTCGTACTGC...................................................... 21 0 1 1.00 1 1 0 0
.................................................................................GTCCTGAGCCCGAGCCCGA....................................................................................................................................................... 19 0 1 1.00 1 0 1 0
.........................................................................................................................................................GCTTCGTCGTTTCCTTGTTTGGC........................................................................... 23 0 1 1.00 1 0 1 0
....................................................................................................................................................................................................................................GCATCTACCACGACGCCGAT... 20 0 1 1.00 1 1 0 0
...........................................................................................................................................................................................................................ACAATTGTCGCTTCTAACACG........... 21 3 2 0.50 1 1 0 0
..........................................................................................................................................................................TTTTGCGGCTGGCTGCTC............................................................... 18 1 2 0.50 1 0 0 1
........................................................................................................................................................GTCTTCGTCGTTTCCAAGTT............................................................................... 20 3 12 0.08 1 1 0 0
...........................................................................................................................................................................................................GCGTTCAAGTGGGAGATCA............................. 19 3 19 0.05 1 1 0 0

Anti-sense strand reads

GGTAACGGCCGACGGGCCGACTAGCGTCGATACGGCGACTGTATGAGGAGGACGTTTGGCTCTGACGTGTGAAGTCTCTCTCAGGACTCGGGCTCGGGCTTAGGAGCATGAAGATAGAGATGGCGTAATCGATGTACACCATACGTGGGTAACCGAAGCAGCAAAGGAACAAACCGCCGACCGACGAGAGCATGACGTACCGGCGGAAGTTCACCCTGTTGTTAGCAGCGTAGATGGTGCTGCGGCTAACG
*************************************************************************..((((.((...(((.((((.....(((((((((........))))............((((((((.......))))))))..........))))).....)))).)))..))))))************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 V110
male body		 V056
head
......................................................................................................................................................................................................................................GAGATGGTGCTGGGGCTA... 18 2 3 0.33 1 1 0 0
.............................ATACTGCGACGGTATGAGCA.......................................................................................................................................................................................................... 20 3 7 0.14 1 0 1 0
..................................................................................................................................................GGGTAACCGGCGCAGCAA....................................................................................... 18 2 9 0.11 1 0 0 1
................................................................................................GGCTTATCAGTATGAAGAT........................................................................................................................................ 19 3 15 0.07 1 0 1 0
.................................................................................................................................................................................................................ATCACCCTGTTGTCAGAAG....................... 19 3 17 0.06 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:11116198-11116448 + dmo_739 CCATTGCCGGCTGCCCGGCT---------GATCGCAGCTATGCCGCTGACATACTCCTC--CTGC----AAACCGAGACTGCACACTTCAGA---------------GAGAGTCCTGAGCCCGA------GCC---------CGAATCCTCGTACTTCTATCTCTACCGCATTAGCTACATGTGGTATGCACCCATTGGCTTCGTCGTTTCCTTGTTTGGCGGCTGGCTGCTCTCGTACTGCATGGCCGCCTTCAAGTGGGACAACAATCGTCGCATCTACCACGACGCCGATTGC
droVir3 scaffold_12970:10342087-10342331 - CTACTGCTGGCTGCCCCGCT---------CAACGCAGCTTTGCCCGCGACATACTGCTG--CAAACGGATGCA---C-------AATTCACA---------------GCTGCTGCGGACCCTGA------ACC---------GGAGTCGTCATATTTCTACCTTTACCGCATCAGCTACATGTGGTATGCCCCACTGGGTTTTCTCATTGCTTTCTTCGGCGGCTGGCTGTTGTCCTCCTTGTTTGCGGCTTTCAACTGGGACAGCAATCGTCACATTTATCAGGATGCGGACTGC
droGri2 scaffold_15203:6638906-6639165 - CCACTGCTGGTTGCCCCAAT---------GATCGCAGCTACCTTCGAGATATACTGCTT--CGAGCAGACGCA---C-------AGTTCACAACGCCGCGCGCCTCTTACATGCGAGAGACGGA------GCC---------GGAGACGGATTACTTTTATATGTATCGCATTAGCTACATGTGGTATGCAGCACTTGGCTTTCTCATTGCCTTCGTCGGCGGCTGGCTGCTCTCCTGGTGCTTTGCGGCTCTCAAATGGGATAACAATAGTCGAATCTATCAGGACGCCGAATGT
droWil2 scf2_1100000004590:3085195-3085439 - CCACGGATGGTTGTCCCATAACCGAATTTAGCCAGAGTCGTGCCAGTGACATATTTCTG--ACAAATTTGCGAGCGG----------------------------------ACCCCGACCAGGA------TCA---------GGACCAACACTATTTCTACTTGTATAGAATAAGCTATATGTGGTATGCTGCTTTAGGCTTTCTGGTGGCCTTCTTTGTCGGTTGGCTACTCTCCTATCTGTTCGCTTGGCTGAAATGGGATGACAATCGACGTATTTACCAAGATCTCGATTGT
dp5 XL_group1a:3874752-3874978 - CCACGGAAGGATGTCCGATT---------GATAGAACCTACGCAAGGGACGCATTCTTCTCAAAGGTGGAGGAGCAG---------------------------------------------CA------GCA---------GGACGAGCACTACTTTTACTTGTACAGGATCAGCTACATGTGGTACGCCGCCCTGGGCTTTCTGGTGGCCTTCTTCGGGGGCTGGCTGCTCTCCTGGCTGTGTGCGCTGCTTAGGTGGGACGACAACCGTCGCATCTACCAGGACGCAGAGTGC
droPer2 scaffold_11:436095-436321 - CCACGGAGGGATGTCCGATT---------GATAGAACCTACGCAAGGGACGCATTCTTCTCAAAGGTGGAGGAGCAG---------------------------------------------CA------GCA---------GGACGAGCACTACTTTTACTTGTACAGGATCAGCTACATGTGGTACGCCGCCCTGGGCTTTCTGGTGGCCTTCTTCGGGGGCTGGCTGCTCTCCTGGCTGTGTGCGCTGCTTAGGTGGGACGACAACCGTCGCATCTACCAGGACGCAGAGTGC
droAna3 scaffold_13417:1347982-1348217 - CCACGGAGGGATGCCCTGTC---------AACAGGAGCTACGCTCGGGATATCTTCCTT--AAGGCGAAGGCC---T---------------------------------------------C-GGGCGAGGAGGACTCTGCGGACGATCACTACTTCTACCTGTACCGGATTAGCTACATGTGGTATGCCGCTCTGGGCTTCGTGGTGACCTTCTTCGGGGGCTGGCTCCTCTCCTGGCTGTGCGCCCTGCTCGGCTGGGACAGCAACCGGAGGATCTACCAGGACGCGGACTGC
droBip1 scf7180000395187:37198-37421 - CCACGGAGGGATGCCCGCTT---------AACAGAAGCTACGCCCGGGATATCTTCCTT--CAGGCTAAGACCGCAG---------------------------------------------T-G------GA---------GGAGGATCACTACTTCTACCTGTACAGGATCAGCTACATGTGGTATGCCGCTCTGGGCTTCGTGGTGACCTTCTTCGGGGGATGGTTCTTGTCTTGGGTGTGCGCCCTGCTCGGCTGGGACAGCAACAGACGGATCTACCAGGACGCGGAGTGT
droKik1 scf7180000302517:230841-231070 - CAACTGCGGGCTGCCCGCTG---------GACAGGAGCTATGCCCAAGATGTATTTTTC--AAGACTGCTGCCAAGG---------------------------------------------C-GGAGGCGGA---------GGAAGAACACTACTTTTACCTGTACAGGATCAGCTACATGTGGTATGCTGCCTTGGGCTTTGTGATTGCCTTCTTTGGCGGCTGGCTTCTGTCCTGGCTGTTTGCCCTGCTCAACTGGGACAGTAATAGGCACATCTATCAGGATGCTGACTGC
droFic1 scf7180000453882:607605-607834 - CCACCGAGGGCTGTCCGCTG---------AACAGGAGTTTCGCCCGCGACGTGTTCCTT--GGGAGAGCCAGTGTGG---------------------------------------------A-GGAGCAGGA---------GGAGCAGCACTACTTCTACCTGTACAGGATTAGCTACATGTGGTACGCTGCTCTGGGCTTCGTCATCGCCTTCTTGGGCGGTTGGCTCCTCTCCTGGCTGTGCGCCCTGCTCAAGTGGGACGACAACAGGCGCATCTACCAGGACGCGGACTGC
droEle1 scf7180000490214:627477-627712 + CCACGGCCCACTGTCCCGTG---------AATAGAAGCTATACCGGGGATATTTTCTTA--AAAGCTGCGAATGCCG---------------------------------------------A-GAA---GCCTGAGACTGGAGATGATCATTACTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTTCTGGTTGCCTTCTTCGGCGGATGGCTGTTGTCCTGGCTGTTTGAGCTCCTTAAATGGGATAACAATCATCGCATCTACCAGGATGCGGAGTGT
droRho1 scf7180000779189:288429-288655 + CCACGGCGGGCTGTCCCATT---------AATAGAAGCTATACTCGCGACATTTTCCTC--CAAGCTGCAACAGCGA---------------------------------------------A-GGTT---GA---------GGATGAGCACTTCTTTTACCAGTACAGGATCAGCTACATGTGGTACGCTGCCATGGGCTTCGTGATTGCCTTTTTCGGCGGCTGGCTCTTATCCTGGCTGTTCGCCGTCCTCAATTGGGACAACAATCGGCGCATCTACCAGGATGCGGACTGT
droBia1 scf7180000302126:3684923-3685155 - CCACCGCCGGCTGTCCGCTG---------GACCGGAGCTATGCCAGTGATATCTTTCTC--AAATCCCCGAAGGCGG-------------------------------------AGGTGGCGGA------TGA---------GGAGCAGCACTACTTTTACCTGTACAGGATCAGCTACATGTGGTACGCCGCCCTGGGTTTCGTGATCGCCTTCTTTGGCGGCTGGTTCTTGTCCTGGGTATTCGAGCTGTTCAACTGGGACAACAATGGACGCATCTACCAGGATGCGGAGTGC
droTak1 scf7180000415394:583089-583315 - CCACAGAGGGGTGTCCTCTA---------AACAGGAGCTTTGCCAGCGATGTTTTCCTG--AAATCTACAAAGGTGG---------------------------------------------A-GTC---CCA---------GGAGGAGCACTTCTTTTACCTGTACAGGATTAGCTACATGTGGTATGCTGCTCTTGGATTCTTGATTGCCTTCTTCGGCGGTTGGCTGTTGTCTTGGCTGTGCGAGCTGTTTAACTGGGACAACAATAGACGCATCTACCAAGATGCAGACTGT
droEug1 scf7180000409901:72710-72936 - CAACGGCGGGATGTCCGATA---------AACAGGAGCTATGCCCGTGACGTTTTCCTC--ATGACTGGTAAAGCGG---------------------------------------------C-GGCG---GA---------GGATGAGCATTTCTTTTACCTGTACAGGATTAGCTACATGTGGTATGCTGCCTTGGGCTTCGTCATTGCTTTTTTCGGTGGCTGGCTCCTGTCCTGGCTGTTTGCTCTTTTTAATTGGGACAACAATAGACGGATCTACCAGGATGCGGACTGT
dm3 chrX:10737318-10737544 - CCACGGCTGGATGTCCGGTG---------GACAGGAGCTTTGCCCGCGACATTTTCCTC--AAGACTGTGATAGCGG---------------------------------------------T-GGCC---GA---------GGAAGAGCATTACTTTTACCTGTACAGGATTAGCTACATGTGGTACGCTGCTTTGGGCTTCCTGATAACCTTCTTTGGCGGATGGCTGTTGTCCTGGCTGTTTGCCCTGCTGAAATGGGACAACAATCGACGCATCTACCAGGATGCGGACTGC
droSim2 x:10195023-10195252 - CCACGGCTGGATGTCCGGTG---------GACAGGAGCTTCCCCCGCGACATTTTCCTC--AAGACTGCTACAACGG---------------------------------------------T-GGCCGAAGA---------AGAAGAGCATTTCTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTCCTGATAACCTTCTTTGGCGGATGGCTGCTGTCCTGGCTGTTTGCCCTGCTCAAATGGGACAACAATCGACGCATCTACCAGGATGCAGACTGC
droSec2 scaffold_15:1440908-1441134 - CCACGGCTGGATGTCCGGTG---------GACAGGAGCTTTGCCCGCGACATTTTTCTC--AAGACTGCGACAGCGG---------------------------------------------T-GGCC---GA---------GGAAGAGCATTTCTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTCCTGATAACCATCTTTGGCGGATGGCTGCTGTCCTGGCTGTTTGCCCTGCTCAAATGGGACAATAATCGACACATCTACCAGGATGCAGACTGC
droYak3 X:19309037-19309266 - CCACGGCTGGTTGTCCGGTG---------GACAGGAGTTTTGCCCGCGACATTTTTCTC--AAGGCTGCAACAGCGG---------------------------------------------T-GGCCGAGGA---------AGAGCAGCATTACTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTCGTGATTACCTTCTTTGGCGGTTGGCTGCTGTCCTGGCTGTTTGCCCTGCTGAAATGGGATAACAATCGACGCATCTACCAGGATGCGGACTGC
droEre2 scaffold_4690:4391561-4391787 + CCACGGCTGGATGTCCGGTG---------GACAGGAGCTTTGCCCGTGACATTTTCCTC--AAGGCGACGACAGCGG---------------------------------------------T-GGCT---GA---------GGAAGAGCATTTCTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTCGTGATTACCTTCTTTGGCGGATGGCTGCTGTCCTGGCTGTTTGCCCTGCTGAAATGGGACAACAATCAACGCATCTACCAGGATGCGGACTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCATTGCCGGCTGCCCGGCT---------GATCGCAGCTATGCCGCTGACATACTCCTC--CTGC----AAACCGAGACTGCACACTTCAGA---------------GAGAGTCCTGAGCCCGA------GCC---------CGAATCCTCGTACTTCTATCTCTACCGCATTAGCTACATGTGGTATGCACCCATTGGCTTCGTCGTTTCCTTGTTTGGCGGCTGGCTGCTCTCGTACTGCATGGCCGCCTTCAAGTGGGACAACAATCGTCGCATCTACCACGACGCCGATTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................GTCGTTTCCTTGTTTGGCGG.........................................................................2012.002200000
............................................................................GACTGCACACTTCAGA---------------GAGA.........................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................GTTTCCTTGTTTGGCGGC........................................................................1811.001100000
..................CT---------GATCGCAGCTATGCCGCTGACATACT.................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................................................................................................................................................................................GTCGCATCTACCACGACGC.......1911.001100000
...............................................GACATACTCCTC--CTGC----AAACCGA............................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................ATTGGCTTCGTCGTTTCCTTGTTTGGCG..........................................................................2811.001100000
.....................................................................................................................................................................................................GGCTTCGTCGTTTCCTTGTTTGGC...........................................................................2411.001100000
.....................................................................................................................................................................................GTGGTATGCACCCATTGGCTTCGTC..........................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................AACAATCGTCGCATCTACCACGACGCC......2711.001100000
.....................................................................................................................................................................................................GGCTTCGTCGTTTCCTTGTTTGGCGGC........................................................................2711.001100000
..............................................................................................................................................................................................................................GCTGGCTGCTCTCGTACTGC......................................................2011.001100000
....................................................ACTCCTC--CTGC----AAACCGA............................................................................................................................................................................................................................1811.001100000
.....................................CTATGCCGCTGACATACTC................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................GTTTCCTTGTTTGGCGGCT.......................................................................1911.001100000
......................................................................................................................................................................................................................................................................CAACAATCGTCGCATCTACCACGACGCC......2811.001100000
.............................................................................................................................................................................................................................GGCTGGCTGCTCTCGTACTGC......................................................2111.001100000
...............................................................................................................GTCCTGAGCCCGA------GCC---------CGA.......................................................................................................................................................1911.001000001
......................................................................................................................................................................................................GCTTCGTCGTTTCCTTGTTTGGC...........................................................................2311.001000001
.................................................................................................................................................................................................................................................................................GCATCTACCACGACGCCGAT...2011.001100000
droVir3
CTACTGCTGGCTGCCCCGCT---------CAACGCAGCTTTGCCCGCGACATACTGCTG--CAAACGGATGCA---C-------AATTCACA---------------GCTGCTGCGGACCCTGA------ACC---------GGAGTCGTCATATTTCTACCTTTACCGCATCAGCTACATGTGGTATGCCCCACTGGGTTTTCTCATTGCTTTCTTCGGCGGCTGGCTGTTGTCCTCCTTGTTTGCGGCTTTCAACTGGGACAGCAATCGTCACATTTATCAGGATGCGGACTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................TACTGCTG--CAAACGGATGCA---C-------....................................................................................................................................................................................................................2113.003000001000000001000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................TTGTCCTCCTTGTTTGCGGCT.............................................2112.002002000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CTTTCTTCGGCGGCTGGCTG..................................................................2012.002101000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AGCTACATGTGGTATGCCCCA......................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
............................................................................C-------AATTCACA---------------GCTGCTGCGGAC.................................................................................................................................................................................2112.002100000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................TTTCAACTGGGACAGCAATCG.........................2112.002000000000000000000000000000000000000000100000000000000000000010
....................................................................................AATTCACA---------------GCTGCTGCGGACC................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CCGCATCAGCTACATGTGGTA.............................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................CA---C-------AATTCACA---------------GCTGCTGCG....................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CGTCACATTTATCAGGATGCG......2111.001000000000000000000000000000000000000000100000000000000000000000
.......................................TTGCCCGCGACATACTGCTG--C..........................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GGCTGGCTGTTGTCCTCCTTGTTTGC.................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTTGCGGCTTTCAACTGGGAC.................................2111.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................TTTTCTCATTGCTTTCTTCGG............................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................GACATACTGCTG--CAAACGGATGCA---C-------A...................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......CTGGCTGCCCCGCT---------CAACGC.....................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GACCCTGA------ACC---------GGAGTCGTC.................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...........................................CCGCGACATACTGCTG--CAAAC......................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................CTGCGGACCCTGA------ACC---------GGAGT.....................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................TCACA---------------GCTGCTGCGGACCCTG.............................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................TTGTTTGCGGCTTTCAACTGG....................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TGTTTGCGGCTTTCAACTGGG...................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CTGA------ACC---------GGAGTCGTCATATT............................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CACATTTATCAGGATGCGGAC...2111.001000000000000000000000000000010000000000000000000000000000000000
...............................................GACATACTGCTG--CAAACGGAT..................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................ATTCACA---------------GCTGCTGCGGACCCTGA------AC....................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................TGCGGACCCTGA------ACC---------GGAGTC....................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................CACA---------------GCTGCTGCGGACCCTGA------......................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................CACA---------------GCTGCTGCGGACCCTGT------......................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TACCTTTACCGCATCAGCTACA....................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TCAACTGGGACAGCAATCGTCACAT...................2511.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACTGGGACAGCAATCGTCACA....................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................CCTTGTTTGCGGCTTTCAAC.......................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................GTTTGCGGCTTTCAACTGGGA..................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................GGCTGTTGTCCTCCTTGTTTGC.................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GGTTTTCTCATTGCTTTCTTCGGC...........................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CTACCTTTACCGCATCAGCT.......................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.TACTGCTGGCTGCCCCGCT---------...........................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................CA---C-------AATTCACA---------------GCTGCTGCGG...................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................GTTTGCGGCTTTCAACTGGGAA.................................2211.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTCTACCTTTACCGCATCAGC........................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................TCTACCTTTACCGCATCAGCT.......................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CTTTACCGCATCAGCTACATGTGGT..............................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGTCCTCCTTGTTTGCGGCTT............................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTCCTTGTTTGCGGCTTTC..........................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................G--CAAACGGATGCA---C-------AATTCAC.............................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................CATGTGGTATGCCCCACTGG..................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTGTTTGCGGCTTTCAACTG.....................................2011.001000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................TGCTGCGGACCCTGA------ACC---------GG........................................................................................................................................................2011.001000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTCAACTGGGACAGCAATCGTCA......................2311.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AATCGTCACATTTATCAGGATGCGGACT..2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TGTGGTATGCCCCACTGGGTT...............................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................ACATGTGGTATGCCCCACTGGGT................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................AATTCACA---------------GCTGCTGCGGACCC...............................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
droGri2
CCACTGCTGGTTGCCCCAAT---------GATCGCAGCTACCTTCGAGATATACTGCTT--CGAGCAGACGCA---C-------AGTTCACAACGCCGCGCGCCTCTTACATGCGAGAGACGGA------GCC---------GGAGACGGATTACTTTTATATGTATCGCATTAGCTACATGTGGTATGCAGCACTTGGCTTTCTCATTGCCTTCGTCGGCGGCTGGCTGCTCTCCTGGTGCTTTGCGGCTCTCAAATGGGATAACAATAGTCGAATCTATCAGGACGCCGAATGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CCACGGATGGTTGTCCCATAACCGAATTTAGCCAGAGTCGTGCCAGTGACATATTTCTG--ACAAATTTGCGAGCGG----------------------------------ACCCCGACCAGGA------TCA---------GGACCAACACTATTTCTACTTGTATAGAATAAGCTATATGTGGTATGCTGCTTTAGGCTTTCTGGTGGCCTTCTTTGTCGGTTGGCTACTCTCCTATCTGTTCGCTTGGCTGAAATGGGATGACAATCGACGTATTTACCAAGATCTCGATTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................GTATTTACCAAGATCTCGATT..2113.00300210
...........................TTAGCCAGAGTCGTGCCAGTGA.......................................................................................................................................................................................................................................................2213.00302100
...........................................................................................................................................................................................TGCTGCTTTAGGCTTTCTGGTGGCC....................................................................................2511.00101000
.........................ATTTAGCCAGAGTCGTGCCAGT.........................................................................................................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................................................................TCCTATCTGTTCGCTTGGCTG..........................................2111.00101000
..........................................................G--ACAAATTTGCGAGCGG----------------------------------ACCC.....................................................................................................................................................................................2111.00110000
...........TGTCCCATAACCGAATTTAGCCAGA....................................................................................................................................................................................................................................................................2511.00100010
......................................................................................................................................................................................................................CTTTGTCGGTTGGCTACTCTCCTATCT.......................................................2711.00100010
...........................TTAGCCAGAGTCGTGCCAGT.........................................................................................................................................................................................................................................................2011.00100010
..................................................................................................................................................................................................................................GCTACTCTCCTATCTGTTCGCTT...............................................2311.00100010
.........................ATTTAGCCAGAGTCGTGC.............................................................................................................................................................................................................................................................1811.00100010
................................................................AATTTGCGAGCGG----------------------------------ACCCCGT..................................................................................................................................................................................2011.00101000
...........................................................................................................................................................................................................................................................CTGAAATGGGATGACAATCGAC.......................2211.00100010
.............................................................................................................................................................................................................................................ATCTGTTCGCTTGGCTGAAAT......................................2111.00100100
..........................TTTAGCCAGAGTCGTGCCAGT.........................................................................................................................................................................................................................................................2111.00100100
..............................................................................................................................................................................................................................................................................GACGTATTTACCAAGATCTCGATT..2411.00100010
.................ATAACCGAATTTAGCCAGA....................................................................................................................................................................................................................................................................1911.00100100
....................................................................................................................................................................................TGTGGTATGCTGCTTTAGG.................................................................................................1911.00100001
...............................................................................................................................................................................................................TGGCCTTCTTTGTCGGTTGG.....................................................................2011.00101000
..........................................................................................................................................................................................................................................................GCTGAAATGGGATGACAAT...........................1911.00100100
......................................................................................................................................................................................................................................................CTTGGCTGAAATGGGATGACAATCGAC.......................2711.00100100
..............CCCATAACCGAATTTAGCCAGA....................................................................................................................................................................................................................................................................2211.00100010
..............................................................................................................................................................................................................................................................................GACGTATTTACCAAGATCTC......2011.00101000
..........................................................................................................................................................................ATAAGCTATATGTGGTATGCTGCT......................................................................................................2411.00100010
.....................................................................................................................ACCAGGA------TCA---------GGACCAACA.................................................................................................................................................1911.00100010
.......................................................................................................................................................................................................................................TCTCCTATCTGTTCGCTTGGC............................................2111.00101000
...................................................................................................................CGACCAGGA------TCA---------GGACCAACACTATT............................................................................................................................................2611.00101000
............................................................................................................................................................................................................................................TATCTGTTCGCTTGGCTGAAATGGGA..................................2611.00101000
.....................................................................................................................................................................................................................................................GCTTGGCTGAAATGGGATGACAATCGA........................2711.00101000
....................................................................................................................................................................................................................TTCTTTGTCGGTTGGCTACTCTC.............................................................2311.00100010
........................................................................................................................................................................GAATAAGCTATATGTGGTATG...........................................................................................................2111.00100010
...................................................................................................................................................................................................................CTTCTTTGTCGGTTGGCTACTCTCCTAT.........................................................2811.00100010
...........................TTAGCCAGAGTCGTGCCAGTGAC......................................................................................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................................................................................TTGGCTGAAATGGGATGACA.............................2011.00101000
....................................................................................................................GACCAGGA------TCA---------GGACCAACACTATT............................................................................................................................................2511.00110000
.....................................................................................................................................................................................................................TCTTTGTCGGTTGGCTACTCTCC............................................................2311.00101000
..........................................................................................................................................................................ATAAGCTATATGTGGTATGC..........................................................................................................2011.00100010
..................................................................................................................................................................................................................CCTTCTTTGTCGGTTGGCTAC.................................................................2111.00101000
.....................................................................................................................................................................................................................TCTTTGTCGGTTGGCTACTCT..............................................................2111.00101000
dp5
CCACGGAAGGATGTCCGATT---------GATAGAACCTACGCAAGGGACGCATTCTTCTCAAAGGTGGAGGAGCAG---------------------------------------------CA------GCA---------GGACGAGCACTACTTTTACTTGTACAGGATCAGCTACATGTGGTACGCCGCCCTGGGCTTTCTGGTGGCCTTCTTCGGGGGCTGGCTGCTCTCCTGGCTGTGTGCGCTGCTTAGGTGGGACGACAACCGTCGCATCTACCAGGACGCAGAGTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................CTACATGTGGTACGCCGCCCT....................................................................................................2112.0020200000000
..................................................GCATTCTTCTCAAAGGTGGA..................................................................................................................................................................................................................................2011.0010100000000
.............TCCGATT---------GATAGAACCTACGC.............................................................................................................................................................................................................................................................2111.0010000000001
....................................................................................................................................................GCACTACTTTTACTTGTACAGGATC...........................................................................................................................2511.0010100000000
...................................................................................................................................................................................................................................................GTGCGCTGCTTAGGTGGGACG................................2111.0010100000000
................................................................................................................................................................................................................GGCCTTCTTCGGGGGCTGGCTGC.................................................................2311.0010100000000
.......................................................................................................................................................................................................................................................GCTGCTTAGGTGGGACGA...............................1811.0010100000000
......................................................................................................................................................................................................................................................................CGACAACCGTCGCATCTACCAGGACGCAG.....2911.0010100000000
.............................................................................................................................................................................................................................................................................CGTCGCATCTACCAGGACGCA......2111.0010100000000
................................................................................................................................................................................................................................................TGTGTGCGCTGCTTAGGTGG....................................2011.0010100000000
.................................GAACCTACGCAAGGGACGCATT.................................................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................ATCTACCAGGACGCAGAGT..1911.0010000001000
droPer2
CCACGGAGGGATGTCCGATT---------GATAGAACCTACGCAAGGGACGCATTCTTCTCAAAGGTGGAGGAGCAG---------------------------------------------CA------GCA---------GGACGAGCACTACTTTTACTTGTACAGGATCAGCTACATGTGGTACGCCGCCCTGGGCTTTCTGGTGGCCTTCTTCGGGGGCTGGCTGCTCTCCTGGCTGTGTGCGCTGCTTAGGTGGGACGACAACCGTCGCATCTACCAGGACGCAGAGTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................GTCGCATCTACCAGGACG........1812.002200000
..................................................................................................................................................................................CATGTGGTACGCCGCCCTG...................................................................................................1911.001100000
....................................................................................................................................A---------GGACGAGCACTACTTTTACTT.....................................................................................................................................2211.001100000
.......................................................................................................................................................................................................................................................................GACAACCGTCGCATCTACC..............1911.001100000
......................................................................................................................................................................CAGGATCAGCTACATGTGGTA.............................................................................................................2111.001010000
...............CGATT---------GATAGAACCTACGCAAGG.........................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................CTACCAGGACGCAGAGTGC1911.001000001
...................................................................................................................................................AGCACTACTTTTACTTGTACAGGATCAG.........................................................................................................................2811.001010000
droAna3
CCACGGAGGGATGCCCTGTC---------AACAGGAGCTACGCTCGGGATATCTTCCTT--AAGGCGAAGGCC---T---------------------------------------------C-GGGCGAGGAGGACTCTGCGGACGATCACTACTTCTACCTGTACCGGATTAGCTACATGTGGTATGCCGCTCTGGGCTTCGTGGTGACCTTCTTCGGGGGCTGGCTCCTCTCCTGGCTGTGCGCCCTGCTCGGCTGGGACAGCAACCGGAGGATCTACCAGGACGCGGACTGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................GTATGCCGCTCTGGGCTT..............................................................................................1811.001100000
............................................................................T---------------------------------------------C-GGGCGAGGAGGACTCTGCGGAC......................................................................................................................................................2411.001100000
..................................................................................................................................................................................................CTGGGCTTCGTGGTGACCTTCTTC..............................................................................2411.001000010
.................................................................................................................................................................................ACATGTGGTATGCCGCTCTGG..................................................................................................2111.001100000
..................................................................GAAGGCC---T---------------------------------------------C-GGGCGAGGAGGACTC.............................................................................................................................................................2411.001010000
...................................................................................................................................................................................................................................................................GGACAGCAACCGGAGGATCTA................2111.001100000
...........................................................................................................................................................................................................................................CTGGCTGTGCGCCCTGCTCGG........................................2111.001100000
................................................................................................................................................................................................................GACCTTCTTCGGGGGCTGGCTCCTCT..............................................................2611.001100000
.......................................................................................................................................................................................GGTATGCCGCTCTGGGCTTCGTGGT........................................................................................2511.001100000
.....................................................................................................................................................................................GTGGTATGCCGCTCTGGGCTTCGT...........................................................................................2411.001010000
.........................................................................................................................................................................................TATGCCGCTCTGGGCTTCGTGGT........................................................................................2311.001100000
..........................................................................................................................................................................................ATGCCGCTCTGGGCTTCGTGG.........................................................................................2111.001100000
droBip1
CCACGGAGGGATGCCCGCTT---------AACAGAAGCTACGCCCGGGATATCTTCCTT--CAGGCTAAGACCGCAG---------------------------------------------T-G------GA---------GGAGGATCACTACTTCTACCTGTACAGGATCAGCTACATGTGGTATGCCGCTCTGGGCTTCGTGGTGACCTTCTTCGGGGGATGGTTCTTGTCTTGGGTGTGCGCCCTGCTCGGCTGGGACAGCAACAGACGGATCTACCAGGACGCGGAGTGTSizeHit CountTotal NormTotal
No Reads
droKik1
CAACTGCGGGCTGCCCGCTG---------GACAGGAGCTATGCCCAAGATGTATTTTTC--AAGACTGCTGCCAAGG---------------------------------------------C-GGAGGCGGA---------GGAAGAACACTACTTTTACCTGTACAGGATCAGCTACATGTGGTATGCTGCCTTGGGCTTTGTGATTGCCTTCTTTGGCGGCTGGCTTCTGTCCTGGCTGTTTGCCCTGCTCAACTGGGACAGTAATAGGCACATCTATCAGGATGCTGACTGCSizeHit CountTotal NormTotal
No Reads
droFic1
CCACCGAGGGCTGTCCGCTG---------AACAGGAGTTTCGCCCGCGACGTGTTCCTT--GGGAGAGCCAGTGTGG---------------------------------------------A-GGAGCAGGA---------GGAGCAGCACTACTTCTACCTGTACAGGATTAGCTACATGTGGTACGCTGCTCTGGGCTTCGTCATCGCCTTCTTGGGCGGTTGGCTCCTCTCCTGGCTGTGCGCCCTGCTCAAGTGGGACGACAACAGGCGCATCTACCAGGACGCGGACTGCSizeHit CountTotal NormTotal
No Reads
droEle1
CCACGGCCCACTGTCCCGTG---------AATAGAAGCTATACCGGGGATATTTTCTTA--AAAGCTGCGAATGCCG---------------------------------------------A-GAA---GCCTGAGACTGGAGATGATCATTACTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTTCTGGTTGCCTTCTTCGGCGGATGGCTGTTGTCCTGGCTGTTTGAGCTCCTTAAATGGGATAACAATCATCGCATCTACCAGGATGCGGAGTGTSizeHit CountTotal NormTotal
No Reads
droRho1
CCACGGCGGGCTGTCCCATT---------AATAGAAGCTATACTCGCGACATTTTCCTC--CAAGCTGCAACAGCGA---------------------------------------------A-GGTT---GA---------GGATGAGCACTTCTTTTACCAGTACAGGATCAGCTACATGTGGTACGCTGCCATGGGCTTCGTGATTGCCTTTTTCGGCGGCTGGCTCTTATCCTGGCTGTTCGCCGTCCTCAATTGGGACAACAATCGGCGCATCTACCAGGATGCGGACTGTSizeHit CountTotal NormTotal
No Reads
droBia1
CCACCGCCGGCTGTCCGCTG---------GACCGGAGCTATGCCAGTGATATCTTTCTC--AAATCCCCGAAGGCGG-------------------------------------AGGTGGCGGA------TGA---------GGAGCAGCACTACTTTTACCTGTACAGGATCAGCTACATGTGGTACGCCGCCCTGGGTTTCGTGATCGCCTTCTTTGGCGGCTGGTTCTTGTCCTGGGTATTCGAGCTGTTCAACTGGGACAACAATGGACGCATCTACCAGGATGCGGAGTGCSizeHit CountTotal NormTotal
No Reads
droTak1
CCACAGAGGGGTGTCCTCTA---------AACAGGAGCTTTGCCAGCGATGTTTTCCTG--AAATCTACAAAGGTGG---------------------------------------------A-GTC---CCA---------GGAGGAGCACTTCTTTTACCTGTACAGGATTAGCTACATGTGGTATGCTGCTCTTGGATTCTTGATTGCCTTCTTCGGCGGTTGGCTGTTGTCTTGGCTGTGCGAGCTGTTTAACTGGGACAACAATAGACGCATCTACCAAGATGCAGACTGTSizeHit CountTotal NormTotal
No Reads
droEug1
CAACGGCGGGATGTCCGATA---------AACAGGAGCTATGCCCGTGACGTTTTCCTC--ATGACTGGTAAAGCGG---------------------------------------------C-GGCG---GA---------GGATGAGCATTTCTTTTACCTGTACAGGATTAGCTACATGTGGTATGCTGCCTTGGGCTTCGTCATTGCTTTTTTCGGTGGCTGGCTCCTGTCCTGGCTGTTTGCTCTTTTTAATTGGGACAACAATAGACGGATCTACCAGGATGCGGACTGTSizeHit CountTotal NormTotal
No Reads
dm3
CCACGGCTGGATGTCCGGTG---------GACAGGAGCTTTGCCCGCGACATTTTCCTC--AAGACTGTGATAGCGG---------------------------------------------T-GGCC---GA---------GGAAGAGCATTACTTTTACCTGTACAGGATTAGCTACATGTGGTACGCTGCTTTGGGCTTCCTGATAACCTTCTTTGGCGGATGGCTGTTGTCCTGGCTGTTTGCCCTGCTGAAATGGGACAACAATCGACGCATCTACCAGGATGCGGACTGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................GGCGGATGGCTGTTGTCCTGG.........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................ATAGCGG---------------------------------------------T-GGCC---GA---------GGAAG.....................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.....................................................................................................................................................................................GTGGTACGCTGCTTTGGGCTT..............................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AATGGGACAACAATCGACGC.....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CCTGTACAGGATTAGCTAC.....................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................ATAGCGG---------------------------------------------T-GGCC---GA---------GGAAGAGA..................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
................................................................................................................................................................................TACATGTGGTACGCTGCTTTGGGCTT..............................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................AACCTTCTTTGGCGGATGGCT...................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
......................................................................................................................................................................................................................CTTTGGCGGATGGCTGTTGTC.............................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TACTTTTACCTGTACAGGAT............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CACGGCTGGATGTCCGGTG---------GA.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TG---------GACAGGAGCTTTGCCCGCGACA.....................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....GCTGGATGTCCGGTG---------GACAGG.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................CGG---------------------------------------------T-GGCC---GA---------GGAAGAGCATTAC.............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........TGTCCGGTG---------GACAGGAGCTTTG..............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................CCTC--AAGACTGTGATAGCGG---------------------------------------------T-G...........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GTG---------GACAGGAGCTTTGCCCGC.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CTGGATGTCCGGTG---------GACAGGAGC..................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................TGTGGTACGCTGCTTTGGGCT...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGGGACAACAATCGACGCATC..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................GATAGCGG---------------------------------------------T-GGCC---GA---------GGAAGAGATC................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTCCGGTG---------GACAGGAGCTTTG..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CCTC--AAGACTGTGATAGCGG---------------------------------------------T-............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GG---------------------------------------------T-GGCC---GA---------GGAAGAGCATTACTTT..........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGCTTTGCCCGCGACATTTTC................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CCCTGCTGAAATGGGACA................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TAGCGG---------------------------------------------T-GGCC---GA---------GGAAGAGC..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........ATGTCCGGTG---------GACAGGAGCTT................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........TGTCCGGTG---------GACAGGAGCTTTGCCCGC.........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................GCTGAAATGGGACAACAATCGACGCAT...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTACCAGGATGCGGACTGC1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................TACAGGATTAGCTACATGTGGTACGC..........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................TTTGGCGGATGGCTGTTGTC.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................AATGGGACAACAATCGAC.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................CTGAAATGGGACAACAATCGACGCATC..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................CTGATAACCTTCTTTGGCGGATG......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................TGATAACCTTCTTTGGCGGATGGC....................................................................2411.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GTGATAGCGG---------------------------------------------T-GGCC---GA---------GGAAG.....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................ACGCTGCTTTGGGCTTCCT...........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..ACGGCTGGATGTCCGGTG---------GAC........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................ATAGCGG---------------------------------------------T-GGCC---GA---------GGAAGAG...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................TACAGGATTAGCTACATGTGGTACG...........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGTG---------GACAGGAGCTTTGCCCGATC.......................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CTGTGATAGCGG---------------------------------------------T-GGCC---GA---------GGAAGA....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CTGTGATAGCGG---------------------------------------------T-GGCC---GA---------GG........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CGACATTTTCCTC--AAGACTGT...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGAAATGGGACAACAATCGAC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTTGGCGGATGGCTGTTGTCC............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GACATTTTCCTC--AAGACTGTGATAGC.............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TGTTTGCCCTGCTGAAATGGG...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................GTGATAGCGG---------------------------------------------T-GGCC---GA---------G.........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................TGTGATAGCGG---------------------------------------------T-GGCC---GA---------GGAA......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACGGCTGGATGTCCGGTG---------GA.........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ATGTGGTACGCTGCTTTGGGCTTT.............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................AACCTTCTTTGGCGGATGGCTGT.................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................ACCTGTACAGGATTAGCTA......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ACAGGATTAGCTACATGTGGG..............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTTGGCGGATGGCTGTTGTCCTGGC........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................ACAGGATTAGCTACATGTG................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............CCGGTG---------GACAGGAGCTTTGC.............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................T-GGCC---GA---------GGAAGAGCATTACTT...........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................GCTTTGGGCTTCCTGATAACCT...................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TGCTGAAATGGGACAACAATC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGTGATAGCGG---------------------------------------------T-GGCC---GA---------G.........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................TG---------GACAGGAGCTTTGCCCGCG........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............TCCGGTG---------GACAGGAGCTTTGCCCGCG........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................CTTCTTTGGCGGATGGCTG..................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................................................................GG---------------------------------------------T-GGCC---GA---------GGAAGAGCAT................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................GTTTGCCCTGCTGAAATGGG...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CTTTGGCGGATGGCTGTT................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTTGGCGGATGGCTGTTGTCCTG..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................GCC---GA---------GGAAGAGCATTACTTTT.........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................TGTGGTACGCTGCTTTGGGC................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGTGATAGCGG---------------------------------------------T-GGCC---GA---------GGA.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GTACAGGATTAGCTACATGTGGTAC............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................CGGATGGCTGTTGTCCTGGCT.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTACCAGGATGCGGACT..1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GATGGCTGTTGTCCTGGCTGT.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TACAGGATTAGCTACATGTGG...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................CTC--AAGACTGTGATAGCGG---------------------------------------------T-GT..........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................TTGGCGGATGGCTGTTGTCCTGGCT.......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droSim2
CCACGGCTGGATGTCCGGTG---------GACAGGAGCTTCCCCCGCGACATTTTCCTC--AAGACTGCTACAACGG---------------------------------------------T-GGCCGAAGA---------AGAAGAGCATTTCTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTCCTGATAACCTTCTTTGGCGGATGGCTGCTGTCCTGGCTGTTTGCCCTGCTCAAATGGGACAACAATCGACGCATCTACCAGGATGCAGACTGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................TACAACGG---------------------------------------------T-GGCCGAAGA---------..........................................................................................................................................................1811.00100010000000000000
......................................................................................................................................................................................................................................................................CAACAATCGACGCATCTACCAGG...........2311.00100100000000000000
...................................................................GCTACAACGG---------------------------------------------T-GGCCGAAG....................................................................................................................................................................1911.00100010000000000000
..........................................................................................................................................................CTTTTACCTGTACAGGATC...........................................................................................................................1911.00101000000000000000
.....................................................................................................................................................................................................................................GCTGTCCTGGCTGTTTGCCC...............................................2011.00101000000000000000
.................................................................................................................................................................................................................ACCTTCTTTGGCGGATGG.....................................................................1811.00101000000000000000
..........................................................................................................................................................................................................CCTGATAACCTTCTTTGGCGGA........................................................................2211.00101000000000000000
..................................................................................................................................................................................................................CCTTCTTTGGCGGATGGCTGCTGTCCT...........................................................2711.00110000000000000000
................................................................................................................................................................................TACATGTGGTACGCTGCCCT....................................................................................................2011.00101000000000000000
........................................................................................................................................................................................................................................GTCCTGGCTGTTTGCCCTGCTCAAATGG....................................2811.00100010000000000000
.......................................................................................................................................................................................................................................................................AACAATCGACGCATCTACCAGG...........2211.00100000001000000000
...................................................................................................................................................................................ATGTGGTACGCTGCCCTGGGCTTCCT...........................................................................................2611.00101000000000000000
.............................................GCGACATTTTCCTC--AAGACTGC...................................................................................................................................................................................................................................2211.00101000000000000000
droSec2
CCACGGCTGGATGTCCGGTG---------GACAGGAGCTTTGCCCGCGACATTTTTCTC--AAGACTGCGACAGCGG---------------------------------------------T-GGCC---GA---------GGAAGAGCATTTCTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTCCTGATAACCATCTTTGGCGGATGGCTGCTGTCCTGGCTGTTTGCCCTGCTCAAATGGGACAATAATCGACACATCTACCAGGATGCAGACTGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............CCGGTG---------GACAGGAGCTTTGCCCGCGA.......................................................................................................................................................................................................................................................2611.0011000
........................................................................................................................................................................................................................................................................ATAATCGACACATCTACCAGG...........2111.0010010
............................................................................................................................................................TTTACCTGTACAGGATCAGCT.......................................................................................................................2111.0011000
....................................................................................................................................................................................................................ATCTTTGGCGGATGGCTGCT................................................................2011.0010100
droYak3
CCACGGCTGGTTGTCCGGTG---------GACAGGAGTTTTGCCCGCGACATTTTTCTC--AAGGCTGCAACAGCGG---------------------------------------------T-GGCCGAGGA---------AGAGCAGCATTACTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTCGTGATTACCTTCTTTGGCGGTTGGCTGCTGTCCTGGCTGTTTGCCCTGCTGAAATGGGATAACAATCGACGCATCTACCAGGATGCGGACTGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................GATTACCTTCTTTGGCGGTTGGCT...................................................................2412.00200000020000
.............................................................................................................................................................................................................GATTACCTTCTTTGGCGGTTGGCTGCT................................................................2712.00202000000000
.......................................................................................................................................................................................GGTACGCTGCCCTGGGCTTCGTG..........................................................................................2312.00200000020000
..........................................................C--AAGGCTGCAACAGCGG---------------------------------------------T-GGC.........................................................................................................................................................................2111.00101000000000
..................TG---------GACAGGAGTTTTGCCCGCGACATTTT.................................................................................................................................................................................................................................................2811.00101000000000
.........................................................................................................................................................................................................................TGGCGGTTGGCTGCTGTC.............................................................1811.00101000000000
...........................................................................................................................................................................................................GTGATTACCTTCTTTGGCGGTTGGCTGC.................................................................2811.00101000000000
......................................................................................................................................................................................................................CTTTGGCGGTTGGCTGCTG...............................................................1911.00101000000000
....................................................................................................................................................................................TGTGGTACGCTGCCCTGGGCTTCGT...........................................................................................2511.00101000000000
............................................................................................................................................................................................................................CGGTTGGCTGCTGTCCTGGCTGTTTGC.................................................2711.00101000000000
................................................................................................................................................................................................................TACCTTCTTTGGCGGTTGGCT...................................................................2111.00101000000000
.............................................................................................................................................................................................................................GGTTGGCTGCTGTCCTGGCT.......................................................2011.00101000000000
.......................................................................................................................................................................................GGTACGCTGCCCTGGGCTTCGT...........................................................................................2211.00101000000000
...........................................................................................................................................................................................................GTGATTACCTTCTTTGGCGGT........................................................................2111.00101000000000
........................................................................................................................................................................................................................................GTCCTGGCTGTTTGCCCTGCTGA.........................................2311.00101000000000
...........................................................................GG---------------------------------------------T-GGCCGAGGA---------AGAGCAGC..................................................................................................................................................2011.00100000010000
.....................................................................AACAGCGG---------------------------------------------T-GGCCGAGGA---------A.........................................................................................................................................................1911.00100000010000
.........................................................................GCGG---------------------------------------------T-GGCCGAGGA---------AGAGCA....................................................................................................................................................2011.00101000000000
..................................................................................................................................................................................................................................................................GGGATAACAATCGACGCAT...................1911.00101000000000
..........................................................................................................................................................................................................................GGCGGTTGGCTGCTGTCCTGGCTGT.....................................................2511.00101000000000
...............................................................................................................................................................................................................TTACCTTCTTTGGCGGTTGGCTGCTGT..............................................................2711.00101000000000
.........................................................................................................................................................................................................................................TCCTGGCTGTTTGCCCTGCTGAAATG.....................................2611.00101000000000
...................................................................GCAACAGCGG---------------------------------------------T-GGCCGAGGA---------A.........................................................................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................TGGGATAACAATCGACGCAT...................2011.00101000000000
..................................................................................................................................................................................................................................GCTGCTGTCCTGGCTGTTTGCCCT..............................................2411.00101000000000
.....................................................................................................................................................................................GTGGTACGCTGCCCTGGGCTT..............................................................................................2111.00101000000000
...................................................................................................................................................................GTACAGGATCAGCTACATGTG................................................................................................................2111.00101000000000
...................................................................GCAACAGCGG---------------------------------------------T-GGCCGAGGA---------AGA.......................................................................................................................................................2311.00100000010000
..........................................................................................................................................................................................................................................CCTGGCTGTTTGCCCTGCTGAAATGGGA..................................2811.00100000010000
CCACGGCTGGTTGTCCGGTG---------GACAG......................................................................................................................................................................................................................................................................2511.00101000000000
droEre2
CCACGGCTGGATGTCCGGTG---------GACAGGAGCTTTGCCCGTGACATTTTCCTC--AAGGCGACGACAGCGG---------------------------------------------T-GGCT---GA---------GGAAGAGCATTTCTTTTACCTGTACAGGATCAGCTACATGTGGTACGCTGCCCTGGGCTTCGTGATTACCTTCTTTGGCGGATGGCTGCTGTCCTGGCTGTTTGCCCTGCTGAAATGGGACAACAATCAACGCATCTACCAGGATGCGGACTGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................GACAGCGG---------------------------------------------T-GGCT---GA---------GGAAGAGC..................................................................................................................................................2312.0020000200
...............................CAGGAGCTTTGCCCGTGACATTTTC................................................................................................................................................................................................................................................2511.0011000000
...............................................GACATTTTCCTC--AAGGCGA....................................................................................................................................................................................................................................1911.0010000100
.............................................................................................................................................................................................................GATTACCTTCTTTGGCGGATGGCTGCT................................................................2711.0010000100
........................................................CTC--AAGGCGACGACAGCGG---------------------------------------------T-G...........................................................................................................................................................................2111.0011000000
........................................................................................................................................................................................................................................................CTGCTGAAATGGGACAACAA............................2011.0011000000
....................................................................CGACAGCGG---------------------------------------------T-GGCT---GA---------GGAA......................................................................................................................................................2011.0010001000
................GGTG---------GACAGGAGCTTTGCCC...........................................................................................................................................................................................................................................................2011.0010100000
........................................................................................................................................................................................................................................GTCCTGGCTGTTTGCCCTGCT...........................................2111.0010100000
....GGCTGGATGTCCGGTG---------GA.........................................................................................................................................................................................................................................................................1811.0010000010
....................................................................CGACAGCGG---------------------------------------------T-GGCT---GA---------GGAAGA....................................................................................................................................................2211.0010000100
................GGTG---------GACAGGAGCTTTGCCCGT.........................................................................................................................................................................................................................................................2211.0010000100
.............................................................................................................................................................................................................GATTACCTTCTTTGGCGGATGGCTG..................................................................2511.0011000000
..................................................................................................................................................GAGCATTTCTTTTACCTGTACAGGATC...........................................................................................................................2711.0010100000
...............................................................................................................................................................................................................................................................AATGGGACAACAATCAACGC.....................2011.0011000000

Generated: 05/17/2015 at 10:57 PM