ID:

dmo_712

 Coordinate:

scaffold_6473:8756973-8757123 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.18 -6.9 -6.8

Flybase annnotation

exon [dmoj_GLEANR_16411:6]; CDS [Dmoj\GI15693-cds]; intron [Dmoj\GI15693-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGACTGGGCGTGACCAGCATCAATGCGATCAATTGTGCTGCCGCGAACAGCGCTAACAGCAGCAGCAACAACAACAACAACAACCTGAACACCAGTCTCGGCAGCAGCGGCAGCAGTCACAATCACAACAACAACAATAGTATCAGCAGCAGCCACAACAACAACCTGAACAACAACCTGAACAACAGCCTGAACAACAGCAGCAGCAGCAGCTCGCGCGGACAGCACAACGAGTACATGATGTCGCTGG
********************************************************************************************........(((.((.((....((.........................))....)).)).)))....................**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V049
head
 M060
embryo
 V056
head
........................................GCCGCGAACAGCGCTAACAGCAGCAG......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
................AGCATCAATGCGATCAATTGTGCT................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................AGCAGCAGCAGCAGCTCGCGCGGAC........................... 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................AGCAGCAGCTCGCGCGGACAGCACAAC................... 27 0 1 1.00 1 1 0 0 0 0
............................................................................................CCAGTCTCGGCAGCAGCGGCAGCA....................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................................CAGCAGCAGCTCGCGCGGACAGCA....................... 24 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................GCGCGGACAGCACAACGA................. 18 0 1 1.00 1 1 0 0 0 0
..................................TGTGCTGCCGCGAACAGCGCT.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
........................................................................CAACAACAACAACCTGAACACCAGT.......................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................AGCCACAACAACAACCTGAACAAC............................................................................ 24 0 1 1.00 1 1 0 0 0 0
......................................................TAACAGCAGCAGCAACAAC.................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0
.......................................................AACAGCAGCAGCAACAACAAC............................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
........................................................ACAGCAGCAGCAACAACAACA.............................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 1
...................................................................AACAACAACAACAACAACCT.................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
.......................................................AACAGCAGCAGCAACAACAACA.............................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 1 0
....................................................................................................................................................................................................AACAGCAGCAGCAGCAGCT.................................... 19 0 20 0.05 1 0 0 0 0 1
..............................................................................................................................................ATAAGCAGCAGCCACATCA.......................................................................................... 19 2 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

ACCTGACCCGCACTGGTCGTAGTTACGCTAGTTAACACGACGGCGCTTGTCGCGATTGTCGTCGTCGTTGTTGTTGTTGTTGTTGGACTTGTGGTCAGAGCCGTCGTCGCCGTCGTCAGTGTTAGTGTTGTTGTTGTTATCATAGTCGTCGTCGGTGTTGTTGTTGGACTTGTTGTTGGACTTGTTGTCGGACTTGTTGTCGTCGTCGTCGTCGAGCGCGCCTGTCGTGTTGCTCATGTACTACAGCGACC
****************************************************************************........(((.((.((....((.........................))....)).)).)))....................******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V049
head
 V056
head
 M046
female body
 V110
male body
.............................................................................................................CCGCCGTCAGTGTTAGTGTTC......................................................................................................................... 21 2 1 1.00 1 1 0 0 0
.............................................................................................................CCGTCGACAGTGTTCGTGTTG......................................................................................................................... 21 2 2 0.50 1 1 0 0 0
............................................................................................................GCCGTCGTCATTGCTAGTGTTC......................................................................................................................... 22 3 2 0.50 1 0 1 0 0
.............................................................................................................CCGTCGTCAGTGCTCGTGTTC......................................................................................................................... 21 3 6 0.17 1 0 1 0 0
.............................................................................................................CCGGCGTCAGTGTTCGTGTTC......................................................................................................................... 21 3 6 0.17 1 1 0 0 0
...................................................................................................................................................................TTGGACTGGTCGTTGGACTA.................................................................... 20 3 8 0.13 1 0 0 1 0
..................................ACACGACGGCGGCTGTTGCGA.................................................................................................................................................................................................... 21 3 13 0.08 1 0 0 1 0
ACCTGACCCCCTCTAGTCG........................................................................................................................................................................................................................................ 19 3 16 0.06 1 0 0 1 0
.............................................................TCGTCGTTGTTGTTGTTGTTGTTG...................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 1
................................................................................................................................................................................TGGACTTGTTGTCACACT......................................................... 18 2 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:8756923-8757173 + dmo_712 TGGACT-GGGCGTGA---------CCAGCATCA-----------------------------------ATGCG-----------AT---CAATTG------------------------------------------------------------------TG-------------------------------------CTGCCGCGAAC----------------------AG-----CG-C-TAAC---AGCAGCAGC---------------------------------------------------AACAACAACAA---CAACAACCTGAAC------------------------------------ACCAGTCTCGGC--------AGCAGCGGCAGCAGTCACAA---------------------------------TC---------------------A---CA---A-------------------CAAC------AACAATAG---------------T---ATC---------AGCAGCAGCCACA-ACAACAA---------------C---CTGAACAACAA-------CCTG---------A----------ACAACAGC---------C---------TGAACAAC---------------------------------AGCAGCA------GC---AGC---------------AG--CTCGCGCG-GACAGCA---------CAACGAGTACATGATGTCG---CTG---------------------------------------G
droVir3 scaffold_12970:4182768-4182997 + TGGACT-CGGAGTTA---------GCAACATAA-----------------------------------ACACC-----------AT---TAATTG------------------------------------------------------------------TG----------------------------------------------------CCTCCGCCGCCGCCGC-CGC-----CG-C-CAAC---AGCAGCAGC---------------------------------------------------AGCAACAACAA---CAACAATCTTAAC------------------------------------CTTAACCTTAAC--------A------GCAGCAACAACAACCT------------------------------GA---------------------A-------------------------------C---------------------------------------------------------A-------------------------ACAGTA-------ACAACAACAAC---------AACAACAACAA-------------C---A---------------AC---AACCTGAACAG------------------CAGCAATAG---C------A------------GCAACGG--CTCCCGCG-GCCAGCA---------CAATGAGTACATGATGTCA---CTG---------------------------------------G
droGri2 scaffold_15203:5087262-5087503 + GAGCAG-CTGGCAAA---------GCGGCAGCA-----------------------------------AAATC-----------A-AAA----------GCAGG-TGGT---------------------------------------GCAAC------------------------AGCAGCAGCAGCAGC----------A---------------------G-----------------------------------CAACAACAACAA---------------------CAACAGCAACAACAACAACA------A------------------CGACAACAACAGC---AGCAGCAGCAGCA--------------------------------------------------------------------------------GCA---------------------G---CAGCAACTT---CAGTCACA----------------GCAGGAGCAGCAGCAACAACAGCAAC------------------ATGTACAA----CA------------------GTGGCAACAACAG-------CGGC---------A----------ACA------------------ACAGCAACC---AC---AAC---------------------------AGCAGCA------GCAGCGACAACAA--------------C----------G---ACG---------------------------------------------------------------------ACA
droWil2 scf2_1100000003523:1014-1232 + CAGCAG-CAACAACA---------GCATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGCAACAATGGC------------AGC---------AACTGCAGC-A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------GCAAC------AACAAC------AGCA---GCA------GC-----------AACAACAGCAGCAACAACAAC------------------------------AGCAGCAGCAACAA------------CAGCA---T-------------------CAGC------AAC------------------------------AGCAAC------AGCAGCAA----CAA------TG------GCA------------G-------CAGCAAC------AACA-------------GC---A---------ACA---------TCAACT---------GC------------------AGCAGCA---------ACAGCGACAGC---AGCAAC-----------------------------------------------------A---------------------------------------A
dp5 4_group1:2702248-2702488 - TAGCAG-CAGCAGCG-----------------------------------------------------AG----------------------------------A------------------------------------AGAAGCAGTGACAGCAGCAGCA---------------------A------A----------AGCAAAAACAGCGAGAGGAGCAGCAGCGCCA--GCAA------CAAA---AGCAGAAGC---------------------------------------------------A------------------------------------------------------------GCG------CC-----------A------GCAG---------CAGC---------------AGAGACAGCAGAAGCG---------------------A---CAGCAGCAGCGA--------GAGGA--GCAGC---AGC---------------AGCAGCGTC------------------AGCAG-------------------CAGCAGCG------------T-------------CAGCAGCA---G-------------------C---------AGCGTC---AGC---------------------------------AGCAGCAGCGTC---AGCAGCAGCAGA-----------GAC----------C---AAGACGACGACG--------ACGACGACA---CTG---------------------------------------C
droPer2 scaffold_0:8271584-8271808 - TCGTCA-CGGCA--ACCCGCAACAGCA---GCA--------------------------------G---CAAA-----------T---------------------------------------------------------------GCAACAGCAGCAGCA---------------------A----------------------------------ATGCAGCAACAGCA--GCAAC---AGCAACAA------------------C---------------------------------------------------------------------AGCAGCAAATGC------AGC------AGCA---------------AC--------A---------GCAACAGCAGCAAA---------------------------TGCAGCAACAGCAGCAGCAGCAGCAACAGCA---G-------------------CAAC------AAC------------------------------------------AGCAA-------CA------------------ACAGCAACAACAG-------CAGC---------A----------ACAACAGC---------C---------GCA---AC---AAC---------------------------AGCAACA------ACAGCAGCAACAG--------------CGCT-------C---ACA---------------------------------------------------------------------GCA
droAna3 scaffold_13340:4279173-4279424 - CGGCAG-TCATG--A---------CCAGCTCGCCAATGTCGCTGTCATGCATCCAACATACGGC-----------------------------------------------------------------------------AGTTG---------------------------------------------------CCAC-A--------------------------------A---------------CA------ACAATAGCAACAG---------------------CAACAGCAACAGCAATAACA------A------------------CAACAACAGCAGT---AGCAGCAGCAGCC--------------------------------------------------------------------------------ACA---------------------A---CAGCAATTGCAA---TC--AGCA-----AATCAGCAAC------------------TACA------------GC------AATAA----------------CAATAACAGCA------------A-------------CAGCAACA-------------------------------ACATCAGC---AAT---------------------------------AGCAGCAA---CAGCAGTGGCAGTGGC-----------AAT----------C---ATATGAGTGCAG--------GCAGTTTCT---TTG---------------------------------------G
droBip1 scf7180000395984:15900-16129 - CTGGGCGCTGC--GA---------GCGGTAGCA-----------------------------------GTGTG-----------G-GCG----------ACTCG-CTGTGGAGCAGTAGCG------AAG-----------CGC------------------------------------AGC---------AGTTCCAGC-A--------------------------------G---------------------CAACAGCAACAACAG---------------------CAGCAGGCCCAACAACAGCAGC------------------------A------AC-----------------------------------------------A------GCAACACCATCACCAC------------------------------CA---------------------G---CAACAAC-------------------------------AACAG---------------C---TCC---------AGCAGCAGCAGCA-ACAACAGGCGCAGCAG----------------------------CAAC---------A----------ACAACAG------C---AACACCATC------------------------------------------ACCACCA------CC---AGCAACA------GGCACAG--A----------C---GGC---------------------------------------------------------------------GCA
droKik1 scf7180000302626:219364-219618 + CAGCCG-GTGTATCA---------GCAACAGCA-----------------------------------GCCTG-----------T---------------------------------------------TTATCAGCAACAGCAGCCTG---------------------TGCAGCAGCAGCAACAG---------------------------------------------------C---AGCAG------------C---------------AGCCTGTCTATCAGCAACA------------------------------------------------GCAGGCGCAGCAGCCTG------TGCA--------------------------------GCAGCAACAACAGCCCG---------------------------TGCA---------------------G---CAGCAACAGCAG--------CCTGT--GCAACAGCAAC------------------AGCAGC---CCGTGC---------AGCAGCAA----CAA------CC------TGT------------G--------------------------------------------CAGCAGCAACAGCAGC------------------CT---------GTGCAGC---AGCAGCA---------GCAG--------------------C----------C---CGTGCAGCAGCAACAAATAAATAA--------------------------------------------------T
droFic1 scf7180000453829:1092977-1093176 + TTGATC-AAGCAGCA---------GCAGCAGCA-----------------------------------ACGGC-----------AG---CAAC------------------------------------------------------------------------------TGCAGCAGCAGCAACTG-------------------------------------------CA--GCAGC---AACAACAG---CAGCAGC---------------------------------------------------A---------------------------------AC------AAC--------------------------------------------AGCAGCAACAACAGCAGC---------------------------AGCA---------------------A---CAGCAACAGCAG--------CAACT--ACAACAACAAC------------------AGCA------------GC------AAC---A-------------------------GCAGCA-------GCAACAACAGC---------AACAGCAGCAA-------------C---T---------------AC---AACAACAACAG------------------CAGCAGCA------GC---A------------GCAACT---------------------------------------------------------------------------------------------
droEle1 scf7180000490564:1431312-1431557 + CGCCCA-A-----CA---------ACA---GCA--------------------------------GCAACGC-----------------CAACTGGCCG-----C------------------------------------CGCCGCC---------------GTGGCCACTGCAGC-------------------------------------------------------A--GC---CGCC----CAACAGCA------------GCAGCAGCAGGCTGTTGTCCAGCAGCA---------------------GCAGCAG---------------------------CAACAAGTTG------TGG------------------CCGCCGCC-----CAGCAG---------CAGC---------------ACCAACAGCAGCAGCA---------------------G---CAGCAACAACAG--------GCGGT--GCAAC------------------------------------------------------A-------------------------GCAGCA-------GCAACATCAAC---------AACAGCAGCAG-------------C---A---------------AC---AACATCAACAG------------------CAGCAGCAA---C------A------------GCAACAT--G-------------------------------------CCGTCG---TAG---------------------------------------C
droRho1 scf7180000780091:224360-224598 + CGCCCA-A-----CA---------ACA---GCA--------------------------------GCAACGC-----------------CAACTGGCCG-----C------------------------------------AGCCGCC---------------GTGGCCACAGCAGC-------------------------------------------------------A--GC---CGCC----CAACAGCA------------GCAGCAGCAGGCGGTTGTCCA---------------GCAGCAGCAGC------------------------------------AACAAGTTG------TGG------------------CCGCCGCC-----CAGCAGCAACACCAGCAGC---------------------------AGCA---------------------G---CAGCAACAACAG--------GCGGT--GCAACAGCAAC------------------AGCA------------GC------AGCAG----------------CATCAACAACA------------G-------------CAG----------------------------C---AGCAACATC------------------AACAG------------------CAGCAACAA---C------A------------GCAGCAT--G----------C---CGC-------------------------------C---------------------------------------G
droBia1 scf7180000299102:1716090-1716307 + TTAAGG-G--CGTGG---------CCGGGGCCCC-----------CAGGCAGCCCATCATCGCCAG-----------------------------------------------------------------------------CT--------------------------------------------------------------------------------------------------T-TACC---AGCAGCAGC---------------------------------------------------AGCAACAGCAG---CAACACCTGCAAC------------------------------------AGCAACATCAGC--------A------GCAGCAACAGCAACAT------------------------------CC---------------------G-------------------------------CAACA---GC---------------AGCAACACCTGCACCAGC---------AACATCA----GCAA------CC------AGC----TTACTACAT-------CAGC---------A----------ACTATAGC---------C---------ACA---TC---A---------G------------------CAGAAGAT------AC---AGCTACAGCGAG--------AAT----------C---TAA---------------------------------------------------------------------TGT
droTak1 scf7180000415158:217817-218041 - TAGTCA-C-----------------CAGCATCA-----------------------------------TAGTCATC--------AT---CATC----------------------------------------------------A-----T---------CA-------------------------------------CCACCACAATC----------------------AC-----CA-T-CATC----ACAGCAGC---------------------------------------------------AGCAACA-----------------------------------------------------------------------------------ATAGCAACAACAGCAG------------------------------TA---------------------G---CAACAGC-------------------------------AACAG---------------C---AAC---------AGCAACAGCATCA----------------ACAAC-------------------------------------A---AC----------------------------AGCAGC---AGC---------------------------------AACAGCAACAGC---AGCAGCAACAAG-----------TTG----------T---ACGAGAACGAGT--------GCG---TCGCCTTGGCCCAGCAGCAACTGAGAGCAGCCGCTGCCCAGGCGGCGCA
droEug1 scf7180000409462:3583648-3583879 + TGGCGA-GGCAGTGA---------CCAAGACCA-----------------------------------TCACCGAGTTGAGAGTGC---CGAC------------------------------------------------------------------------------TATAA------------------------CGACCACAAAC----------------------AT-----CA-G-TAAC------------------------------------------------AGCCACAGCAAT---AGCA---ACACGAACAACACTAGCAAC------------------------------------AGCAACAGCAAC--------A------G---------------------------------------------CA------------------------------A----------------------------------------------------C---AGC---------AGCAACATCAACA-------------------------GCAACA-------GCAACAGCAGC---------AACATCAACGG-------------C---A---------------AC---AACAACAACAA------------------CAACAACAA---C------A------------GCAACAT--GTCGCGCCTTAT---A---------CAAC-----CAAGATATCG---CTT---------------------------------------T
dm3 chr2L:13272609-13272854 + TGGCTC--AGGTGCA---------GCAGCAGCA-----------------------------------GCAAC-----------A---------------------------------------------------------GCAGTTGCAACAGCAGCAGCA---------------------A----------------------------------CAGCAGTTGCAACA--GCAGC---AGCAACAG------------------C---------------------------------------------------------------------AGTTGCAAC------AGCAGC------AGCAACAGCT------CC-----------A------GCAG---------CTGC---------------AGCAACAGCAGTTCCAGCAGCAACAA------------TTGCA---G-------------------CAAC------AACAGTTC---------------C---------------------AGCAACAA----CAG------TT------GCA------------G----CAGCAGC---------AACA-------------GC---AGC---------A---------ACAGCA---------GC------------------AACAGCA---------GCAGCAACAGC---AGCAGCAA--C----------C---GGCTGTT---CAAT-------------CA---GTA---------------------------------------C
droSim2 x:9134047-9134288 + CAGCAT-CAGGCGCA---------GCAGCAGCA-----------------------------------ACACG-----------C---------------------------------------------------------------GCAACAGCAGCAACA---------------------C----------------------------------GCGCAACAGCAGCA--ACATC---ATCTGCAC------------------A---------------------TGCA------------------------------------------------GCATGCGCAACATCATC------TGCACTTGTC------CC-----------A------TCAG---------CAGG---------------CGCAACAGCAGCACATGCAACA---------------------------C---TTGACACA----------------GCAACAG---------------C---AGC---------AGCAGCAGCAACA----------------ACAACAGCA------------G----CAGCAGC---------AACAGCAGCA----------------------------------GCAGCAACAACAACA------------------------------------GCCGCAACAGC---AGCAACAT--G-------------------------------------ACTTCC---TCA---------------------------------------G
droSec2 scaffold_6:3193674-3193897 - CGGACT-CGGCCGCT---------GCAGCC--A-----------------------------------ACGC-----------------CAT-------GGAGG-T------------------------------------GAT---GCACC------------------------AGCAGCAGCAGCAGC----------A---------------------GCAACAACA--G---------------------------------C---------------------------------------------------------AGCAGCAGCAACAGCA------------------------------------------AC--------A------G---CAGCAGCAGCAGGCGCACCACCACCATCCGCAACACGGAGTCCCGCCGCAGCAA------------CATGT---C-------------------CCGC------CCC------------------------------AGCAGC------AGCAG----------------CAACAACAGCA------------G-------------CAGCAACA-------------------------------CCATCATC---CGC---------------------------------AGCAGCAA---CCTCCTCCGCAGC-------------------------------A---------CA----------------------G---------------------------------------C
droYak3 3L:16263987-16264225 + CAACCT-GTTT---A---------CCAAAATCA-----------------------------------GC-----------------------------------CTGTGTATCAGCAACAGCAGCCAGTCTATCAGCAGCAACAGCC---------------T-------------------------------------------------------GTGCAACAGCAGCA--ACAAC---CTGTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGCAGCAACAGCCTG---------------------------TGCAACAGCAGCAACAGCCTGTGCAA----------------------------------CAGCAGC------------------AACAGC------------------CTGTG-------------------------CA------------A----CAGCAGC---------AACA-------------GCCTGTGC---------A---------ACAGCA---------GCAACAGTCTGTGCAACAGCAGCAAC--------------------------------AAC----------C---AGT---------------------------------------------------------------------ACA
droEre2 scaffold_4690:1183961-1184189 - TCGCAT-CAGCAGCA---------GCAGCAGCT-------------------------------------------------------------------------------------------------------------------GCTTCAGCAGCAGCA---------------------A----------------------------------CTTCAGCAGCAGCA--GCAGC---AACTTCAG------------------C---------------------------------------------------------------------AGCAGCATCAGC---AGCAGC------TGCA---GCA------TC-----------A------ACAG---------CAGC---------------TGCAACATCAACAGCAGCTGCAGCAT------------CAACA---G-------------------CAGC------TGC------------------------------------------AGCAT-------CAA---------------C---ACCAACTGCAG----CAGCAGCAGC------ATCA-------------GC---AGC---------A---------GCTGCA---------GC------------------ATCAGCA---------TCACCAACAGC---AGCAGT---------------------------------ACGCAGACGATACC----------------------------------------------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGGACT-GGGCGTGA---------CCAGCATCA-----------------------------------ATGCG-----------AT---CAATTG------------------------------------------------------------------TG-------------------------------------CTGCCGCGAAC----------------------AG-----CG-C-TAAC---AGCAGCAGC---------------------------------------------------AACAACAACAA---CAACAACCTGAAC------------------------------------ACCAGTCTCGGC--------AGCAGCGGCAGCAGTCACAA---------------------------------TC---------------------A---CA---A-------------------CAAC------AACAATAG---------------T---ATC---------AGCAGCAGCCACA-ACAACAA---------------C---CTGAACAACAA-------CCTG---------A----------ACAACAGC---------C---------TGAACAAC---------------------------------AGCAGCA------GC---AGC---------------AG--CTCGCGCG-GACAGCA---------CAACGAGTACATGATGTCG---CTG---------------------------------------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................GCCGCGAAC----------------------AG-----CG-C-TAAC---AGCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................AGCATCA-----------------------------------ATGCG-----------AT---CAATTG------------------------------------------------------------------TG-------------------------------------CT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA------GC---AGC---------------AG--CTCGCGCG-GAC..............................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------GC---AGC---------------AG--CTCGCGCG-GACAGCA---------CAAC.............................................................2711.001100000
........................................................................................................................................................................................................................................................................................................................................................................................CCAGTCTCGGC--------AGCAGCGGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------GC---AGC---------------AG--CTCGCGCG-GACAGCA---------.................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCG-GACAGCA---------CAACGA...........................................................1811.001100000
.............................................................................................TG------------------------------------------------------------------TG-------------------------------------CTGCCGCGAAC----------------------AG-----CG-C-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.............................................................................................................................................................................................................................................................................................................................CAACAA---CAACAACCTGAAC------------------------------------ACCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACA-ACAACAA---------------C---CTGAACAAC.......................................................................................................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................................................TAAC---AGCAGCAGC---------------------------------------------------AACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
......................................................................................................................................................................................................................................................AAC---AGCAGCAGC---------------------------------------------------AACAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.......................................................................................................................................................................................................................................................AC---AGCAGCAGC---------------------------------------------------AACAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
........................................................................................................................................................................................................................................................................................................................AACAACAACAA---CAACAACCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
......................................................................................................................................................................................................................................................AAC---AGCAGCAGC---------------------------------------------------AACAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------------AGCAGCA------GC---AGC---------------AG--CT........................................................................................19200.051000100
droVir3
TGGACT-CGGAGTTA---------GCAACATAA-----------------------------------ACACC-----------AT---TAATTG------------------------------------------------------------------TG----------------------------------------------------CCTCCGCCGCCGCCGC-CGC-----CG-C-CAAC---AGCAGCAGC---------------------------------------------------AGCAACAACAA---CAACAATCTTAAC------------------------------------CTTAACCTTAAC--------A------GCAGCAACAACAACCT------------------------------GA---------------------A-------------------------------C---------------------------------------------------------A-------------------------ACAGTA-------ACAACAACAAC---------AACAACAACAA-------------C---A---------------AC---AACCTGAACAG------------------CAGCAATAG---C------A------------GCAACGG--CTCCCGCG-GCCAGCA---------CAATGAGTACATGATGTCA---CTG---------------------------------------GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................AGCAACAACAA---CAACAATCTTAAC------------------------------------CTTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TAACCTTAAC--------A------GCAGCAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TTAAC--------A------GCAGCAACAACAACCT------------------------------GA---------------------A-------------------------------C---------------------------------------------------------A-------------------------AC................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ACAACAA---CAACAATCTTAAC------------------------------------CTTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AACCTGAACAG------------------CAGCAATAG---C------................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.GGACT-CGGAGTTA---------GCAACAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAC--------A------GCAGCAACAACAACCT------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................AA-----------------------------------ACACC-----------AT---TAATTG------------------------------------------------------------------TG----------------------------------------------------CCTCCGCCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ATCTTAAC------------------------------------CTTAACCTTAAC--------..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AACCTTAAC--------A------GCAGCAACAACAACCT------------------------------GA---------------------A-------------------------------......................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---C------A------------GCAACGG--CTCCCGCG-GCCAGCA---------.................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................GC-CGC-----CG-C-CAAC---AGCAGCAGC---------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA-------------C---A---------------AC---AACCTGAACA......................................................................................................................................................2340.251000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA-------------C---A---------------AC---AACCTG..........................................................................................................................................................18190.112100000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................AAC---AGCAGCAGC---------------------------------------------------AGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AGCAGCAGC---------------------------------------------------AGCAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000000020000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------ACAGTA-------ACAACAACAAC---------A................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................GCAGCAGC---------------------------------------------------AGCAACAACAA---CAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................AGCAGC---------------------------------------------------AGCAACAACAA---CAACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------ACAGTA-------ACAACAACAAC---------AAC..............................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CG-C-CAAC---AGCAGCAGC---------------------------------------------------AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTA-------ACAACAACAAC---------AACAAC...........................................................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................C---AGCAGCAGC---------------------------------------------------AGCAACAACAA---CAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAC---------AACAACAACAA-------------C---A---------------AC---................................................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GCAGCAGC---------------------------------------------------AGCAACAACAA---CAACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AC---AGCAGCAGC---------------------------------------------------AGCAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
droGri2
GAGCAG-CTGGCAAA---------GCGGCAGCA-----------------------------------AAATC-----------A-AAA----------GCAGG-TGGT---------------------------------------GCAAC------------------------AGCAGCAGCAGCAGC----------A---------------------G-----------------------------------CAACAACAACAA---------------------CAACAGCAACAACAACAACA------A------------------CGACAACAACAGC---AGCAGCAGCAGCA--------------------------------------------------------------------------------GCA---------------------G---CAGCAACTT---CAGTCACA----------------GCAGGAGCAGCAGCAACAACAGCAAC------------------ATGTACAA----CA------------------GTGGCAACAACAG-------CGGC---------A----------ACA------------------ACAGCAACC---AC---AAC---------------------------AGCAGCA------GCAGCGACAACAA--------------C----------G---ACG---------------------------------------------------------------------ACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................GCAGCA--------------------------------------------------------------------------------GCA---------------------G---CAGCAACTT---CAGTC.................................................................................................................................................................................................................................................................................................................................................2411.00110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA----------------GCAGGAGCAGCAGCAACA............................................................................................................................................................................................................................................................................................................2170.29211
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCAGCAACAACAGCA......................................................................................................................................................................................................................................................................................................2090.22220
....................................................................................................................................................................................................................................................................................................................................................ACAACAACAGC---AGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.20422
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG-------CGGC---------A----------ACA------------------ACAGCA...........................................................................................................................................................................1960.17110
.........................................................................................................................................................................................................................................................................ACAACAA---------------------CAACAGCAACAACAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05110
.......................................................................................................................................................AC------------------------AGCAGCAGCAGCAGC----------A---------------------G-----------------------------------CAACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110
...................................................................................................................................................................................CAGCAGCAGCAGC----------A---------------------G-----------------------------------CAACAACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110
..................................................................................................................................................................................GCAGCAGCAGCAGC----------A---------------------G-----------------------------------CAACAACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAGCAGCAACAACA.........................................................................................................................................................................................................................................................................................................18200.05110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA----------------GCAGGAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................18200.05110
....................................................................................................................................................................................................................................................................................................................................................ACAACAACAGC---AGCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACC---AC---AAC---------------------------AGCA..............................................................................................................................18200.05110
droWil2
CAGCAG-CAACAACA---------GCATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGCAACAATGGC------------AGC---------AACTGCAGC-A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------GCAAC------AACAAC------AGCA---GCA------GC-----------AACAACAGCAGCAACAACAAC------------------------------AGCAGCAGCAACAA------------CAGCA---T-------------------CAGC------AAC------------------------------AGCAAC------AGCAGCAA----CAA------TG------GCA------------G-------CAGCAAC------AACA-------------GC---A---------ACA---------TCAACT---------GC------------------AGCAGCA---------ACAGCGACAGC---AGCAAC-----------------------------------------------------A---------------------------------------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------------------------------AGCAGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................18200.20400040
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------CAGC------AAC------------------------------AGCAAC------AGCAGCAA----CAA------T............................................................................................................................................................................................................................................................2660.17101000
...........................TCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGCAACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------ACAGCGACAGC---AGCAAC-----------------------------------------------------.........................................2070.14101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------------AGCAAC------AGCAGCAA----CAA------TG------G....................................................................................................................................................................................................................................................23200.10202000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------------AGCAAC------AGCAGCAA----CAA------TG------GC...................................................................................................................................................................................................................................................24200.10202000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------CAGC------AAC------------------------------AGCAAC------AGCAGCAA----CA....................................................................................................................................................................................................................................................................24100.10100010
........................................................................................................................................................................................................................................................................................................................................................CAAC------AACAAC------AGCA---GCA------GC-----------AACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200011
................................A-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGCAACAATGGC------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
........................................................................................................................................................................................................................................................................................................................................................CAAC------AACAAC------AGCA---GCA------GC-----------AAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
......................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAC------------------------------AGCAGCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
..........................................................................................................................................................................................................................................................................CAACAG---------------------CA------------------------------------------------GCAAC------AACAAC------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200020
................................A-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGCAACAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
...........................TCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.10100010
............................................................................................................................................................................................................................................C------A---------------ACAACAACAACAG---------------------CA------------------------------------------------GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10202000
........................................................................................................................................................................................................................................................................................................................................................CAAC------AACAAC------AGCA---GCA------GC-----------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200020
..........CAACA---------GCATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------CAGCA---T-------------------CAGC------AAC------------------------------AGCAAC------AGCAG.............................................................................................................................................................................................................................................................................27120.08100010
............................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------------------------AGCAGCAGCAACAA------------CAGCA---T-------------------CAG......................................................................................................................................................................................................................................................................................................................................27120.08100010
.......CAACAACA---------GCATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA------------CAGCA---T-------------------CAGC------AAC------------------------------AGCAAC------AG................................................................................................................................................................................................................................................................................27120.08101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA------------CAGCA---T-------------------CAGC------AAC------------------------------AGC...........................................................................................................................................................................................................................................................................................22140.07100010
.......CAACAACA---------GCATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.07100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ACAGCGACAGC---AGCAAC-----------------------------------------------------.........................................18160.06100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---T-------------------CAGC------AAC------------------------------AGCAAC------AGCAG.............................................................................................................................................................................................................................................................................23170.06101000
..............A---------GCATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
..........CAACA---------GCATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.06100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------CAGCA---T-------------------CAGC------AAC------------------------------AGC...........................................................................................................................................................................................................................................................................................19170.06100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGACAGC---AGCAAC-----------------------------------------------------A---------------------------------------.18180.06100010
..........................ATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---T-------------------CAGC------AAC------------------------------AGCAAC------AGCAGCAA----C.....................................................................................................................................................................................................................................................................24190.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---T-------------------CAGC------AAC------------------------------AGCAAC------AGCAGC............................................................................................................................................................................................................................................................................21200.05101000
......................................................................A-----------------------------------------------------------------------------GCAACAGCAGCAACAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
...........................................................................................................................................................................................................................................GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...........................................................................................................................................................................................................................................................................................................................................................C------AACAAC------AGCA---GCA------GC-----------AACAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..............................................................................................................................................................................................................................................................................AG---------------------CA------------------------------------------------GCAAC------AACAAC------AGCA---GCA------GC-----------AA................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
...................................................................................................................................................................................................................................................................................................................................................................ACAAC------AGCA---GCA------GC-----------AACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................................................AAC------AACAAC------AGCA---GCA------GC-----------AA................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
.....................................................................................................................................................................................................................................................................AACAACAACAG---------------------CA------------------------------------------------GCAAC------AACAAC------AG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AAC------------------------------AGCAAC------AGCAGCAA----CAA------TG------GC...................................................................................................................................................................................................................................................25200.05101000
..........................................................................................................................................................................................................A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................C------AGCA---GCA------GC-----------AACAACAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAAC------------------------------AGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................................AACAG---------------------CA------------------------------------------------GCAAC------AACAAC------AGCA---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
...............................CA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGCAACAATGGC------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..........................ATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAAC------------------------------AGCAGCAGCAA....................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
........................................................................................................................................................................................................C-A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------GCAAC------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..........................................................................................................................................................................................................A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------GCAAC------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.......................................................................................................................................................................................................GC-A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.........................CATCAGCA-----------------------------------ACA-----------------------------------------------------------------------------GCAACAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................GCA------GC-----------AACAACAGCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
........................................................................................................................................................................................................C-A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAC------------------------------AGCAGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...........................................................................................................................................................................................................................................GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------------AGCAGCAGCAACAA------------CAGCA---.............................................................................................................................................................................................................................................................................................................................................................22200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---T-------------------CAGC------AAC------------------------------AGCAAC------AGCA..............................................................................................................................................................................................................................................................................20200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAAC------------------------------AGCAGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC------AGCAGCAA----CAA------TG------G....................................................................................................................................................................................................................................................20200.05101000
........................................................................................................................................................................................................................................................................AACAACAG---------------------CA------------------------------------------------GCAAC------AACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
......................................................................................................................................................................................................AGC-A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------------------------------AGCAGCAGCAACAA------------.....................................................................................................................................................................................................................................................................................................................................................................19200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------------------------------AGCAGCAGCAACAA------------CA...................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAACAAC------------------------------AGC............................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................AAC------AGCA---GCA------GC-----------AACAACAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................................................................................................................A------------------------------------------------GCAAC------AACAAC------AGCA---GCA------GC-----------AACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAAC------------------------------AGCAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.......................................................................................................................................................................................................................................................................CAACAACAG---------------------CA------------------------------------------------GCAAC------AACAAC------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100001
.......................................................................................................................................................................................................................................................................................................................................................GCAAC------AACAAC------AGCA---GCA------GC-----------AACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..........................................................................................................................................................................................................................................................................CAACAG---------------------CA------------------------------------------------GCAAC------AACAAC------AGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................AGC-A--------------------------------GC------A---------------ACAACAACAACAG---------------------CA------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAACAAC------------------------------AGCAG..........................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...............................................................................................................................................................................................................................................................................G---------------------CA------------------------------------------------GCAAC------AACAAC------AGCA---GCA------GC-----------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAAC------------------------------AGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..................................................................................................................................................................................................................................................................................................................................................................AACAAC------AGCA---GCA------GC-----------AACAACAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
dp5
TAGCAG-CAGCAGCG-----------------------------------------------------AG----------------------------------A------------------------------------AGAAGCAGTGACAGCAGCAGCA---------------------A------A----------AGCAAAAACAGCGAGAGGAGCAGCAGCGCCA--GCAA------CAAA---AGCAGAAGC---------------------------------------------------A------------------------------------------------------------GCG------CC-----------A------GCAG---------CAGC---------------AGAGACAGCAGAAGCG---------------------A---CAGCAGCAGCGA--------GAGGA--GCAGC---AGC---------------AGCAGCGTC------------------AGCAG-------------------CAGCAGCG------------T-------------CAGCAGCA---G-------------------C---------AGCGTC---AGC---------------------------------AGCAGCAGCGTC---AGCAGCAGCAGA-----------GAC----------C---AAGACGACGACG--------ACGACGACA---CTG---------------------------------------CSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GCAGC---AGC---------------AGCAGCGTC------------------AGCA..............................................................................................................................................................................................................................................................................2270.2920200000000
.......................................................................................................................................................ACAGCAGCAGCA---------------------A------A----------AGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.1310000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AGC---------------AGCAGCGTC------------------AGCAG-------------------C.........................................................................................................................................................................................................................................................2190.1110000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---G-------------------C---------AGCGTC---AGC---------------------------------AGCAGCAGC.........................................................................................................................2290.1110000000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---G-------------------C---------AGCGTC---AGC---------------------------------AGC...............................................................................................................................2190.1110000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-------------------CAGCAGCG------------T-------------CAGCAGC.................................................................................................................................................................................................................2190.1110000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AGCAGCGTC------------------AGCAG-------------------CAGCAGC...................................................................................................................................................................................................................................................2290.1110000000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCG------------T-------------CAGCAGCA---G-------------------C---------AGC............................................................................................................................................................................2290.1110000000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------AGCAGCAGCGTC---AGCAGC.............................................................................................................2190.1110000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCGTC---AGCAGCAGCA.........................................................................................................20110.0910100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---G-------------------C---------AGCGTC---AGC---------------------------------AGCAGCA...........................................................................................................................20110.0910100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AGCAGCGTC------------------AGCAG-------------------CAGCA.....................................................................................................................................................................................................................................................20110.0910100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCG------------T-------------CAGCAGCA---G-------------------C---------A..............................................................................................................................................................................20110.0910100000000
droPer2
TCGTCA-CGGCA--ACCCGCAACAGCA---GCA--------------------------------G---CAAA-----------T---------------------------------------------------------------GCAACAGCAGCAGCA---------------------A----------------------------------ATGCAGCAACAGCA--GCAAC---AGCAACAA------------------C---------------------------------------------------------------------AGCAGCAAATGC------AGC------AGCA---------------AC--------A---------GCAACAGCAGCAAA---------------------------TGCAGCAACAGCAGCAGCAGCAGCAACAGCA---G-------------------CAAC------AAC------------------------------------------AGCAA-------CA------------------ACAGCAACAACAG-------CAGC---------A----------ACAACAGC---------C---------GCA---AC---AAC---------------------------AGCAACA------ACAGCAGCAACAG--------------CGCT-------C---ACA---------------------------------------------------------------------GCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AC---AAC---------------------------AGCAACA------ACAGCAGCAACAG--------------..........................................................................................2650.201010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------AGCAACA------ACAGCAGCAACAG--------------..........................................................................................2390.111010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---G-------------------CAAC------AAC------------------------------------------AGCAA-------CA------------------ACAGC.............................................................................................................................................................................................................................................22200.051100000
............................................................................................................................................................................................................................................................................................................................................................TGC------AGC------AGCA---------------AC--------A---------GCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................19200.051001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------AGCAACA------ACAGCAGCAAC..........................................................................................................21200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------ACAGCAACAACAG-------CAGC---------A----------AC....................................................................................................................................................................................................21200.051010000
droAna3
CGGCAG-TCATG--A---------CCAGCTCGCCAATGTCGCTGTCATGCATCCAACATACGGC-----------------------------------------------------------------------------AGTTG---------------------------------------------------CCAC-A--------------------------------A---------------CA------ACAATAGCAACAG---------------------CAACAGCAACAGCAATAACA------A------------------CAACAACAGCAGT---AGCAGCAGCAGCC--------------------------------------------------------------------------------ACA---------------------A---CAGCAATTGCAA---TC--AGCA-----AATCAGCAAC------------------TACA------------GC------AATAA----------------CAATAACAGCA------------A-------------CAGCAACA-------------------------------ACATCAGC---AAT---------------------------------AGCAGCAA---CAGCAGTGGCAGTGGC-----------AAT----------C---ATATGAGTGCAG--------GCAGTTTCT---TTG---------------------------------------GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGC-----------AAT----------C---ATATGAGTGC.................................................................2012.002000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAGCAGTGGCAGTGGC-----------AAT----------C---AT.........................................................................2511.001010000
...........................GCTCGCCAATGTCGCTGTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------A---CAGCAATTGCAA---TC--AGCA-----AAC...................................................................................................................................................................................................................................................................................................................................2411.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGCAG--------GCAGTTTCT---T..........................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................CAACAGCAGT---AGCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.171100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------A-------------CAGCAACA-------------------------------ACATCAGC---......................................................................................................................................................................1970.141001000
.........................................................................................................................................................................................................................................................................................................................................................AGCAGT---AGCAGCAGCAGCC--------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................1980.131100000
.....................................................................................................................................................................................................................................................................AATAGCAACAG---------------------CAACAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091010000
droBip1
CTGGGCGCTGC--GA---------GCGGTAGCA-----------------------------------GTGTG-----------G-GCG----------ACTCG-CTGTGGAGCAGTAGCG------AAG-----------CGC------------------------------------AGC---------AGTTCCAGC-A--------------------------------G---------------------CAACAGCAACAACAG---------------------CAGCAGGCCCAACAACAGCAGC------------------------A------AC-----------------------------------------------A------GCAACACCATCACCAC------------------------------CA---------------------G---CAACAAC-------------------------------AACAG---------------C---TCC---------AGCAGCAGCAGCA-ACAACAGGCGCAGCAG----------------------------CAAC---------A----------ACAACAG------C---AACACCATC------------------------------------------ACCACCA------CC---AGCAACA------GGCACAG--A----------C---GGC---------------------------------------------------------------------GCASizeHit CountTotal NormTotal
No Reads
droKik1
CAGCCG-GTGTATCA---------GCAACAGCA-----------------------------------GCCTG-----------T---------------------------------------------TTATCAGCAACAGCAGCCTG---------------------TGCAGCAGCAGCAACAG---------------------------------------------------C---AGCAG------------C---------------AGCCTGTCTATCAGCAACA------------------------------------------------GCAGGCGCAGCAGCCTG------TGCA--------------------------------GCAGCAACAACAGCCCG---------------------------TGCA---------------------G---CAGCAACAGCAG--------CCTGT--GCAACAGCAAC------------------AGCAGC---CCGTGC---------AGCAGCAA----CAA------CC------TGT------------G--------------------------------------------CAGCAGCAACAGCAGC------------------CT---------GTGCAGC---AGCAGCA---------GCAG--------------------C----------C---CGTGCAGCAGCAACAAATAAATAA--------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droFic1
TTGATC-AAGCAGCA---------GCAGCAGCA-----------------------------------ACGGC-----------AG---CAAC------------------------------------------------------------------------------TGCAGCAGCAGCAACTG-------------------------------------------CA--GCAGC---AACAACAG---CAGCAGC---------------------------------------------------A---------------------------------AC------AAC--------------------------------------------AGCAGCAACAACAGCAGC---------------------------AGCA---------------------A---CAGCAACAGCAG--------CAACT--ACAACAACAAC------------------AGCA------------GC------AAC---A-------------------------GCAGCA-------GCAACAACAGC---------AACAGCAGCAA-------------C---T---------------AC---AACAACAACAG------------------CAGCAGCA------GC---A------------GCAACT---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGCCCA-A-----CA---------ACA---GCA--------------------------------GCAACGC-----------------CAACTGGCCG-----C------------------------------------CGCCGCC---------------GTGGCCACTGCAGC-------------------------------------------------------A--GC---CGCC----CAACAGCA------------GCAGCAGCAGGCTGTTGTCCAGCAGCA---------------------GCAGCAG---------------------------CAACAAGTTG------TGG------------------CCGCCGCC-----CAGCAG---------CAGC---------------ACCAACAGCAGCAGCA---------------------G---CAGCAACAACAG--------GCGGT--GCAAC------------------------------------------------------A-------------------------GCAGCA-------GCAACATCAAC---------AACAGCAGCAG-------------C---A---------------AC---AACATCAACAG------------------CAGCAGCAA---C------A------------GCAACAT--G-------------------------------------CCGTCG---TAG---------------------------------------CSizeHit CountTotal NormTotal
No Reads
droRho1
CGCCCA-A-----CA---------ACA---GCA--------------------------------GCAACGC-----------------CAACTGGCCG-----C------------------------------------AGCCGCC---------------GTGGCCACAGCAGC-------------------------------------------------------A--GC---CGCC----CAACAGCA------------GCAGCAGCAGGCGGTTGTCCA---------------GCAGCAGCAGC------------------------------------AACAAGTTG------TGG------------------CCGCCGCC-----CAGCAGCAACACCAGCAGC---------------------------AGCA---------------------G---CAGCAACAACAG--------GCGGT--GCAACAGCAAC------------------AGCA------------GC------AGCAG----------------CATCAACAACA------------G-------------CAG----------------------------C---AGCAACATC------------------AACAG------------------CAGCAACAA---C------A------------GCAGCAT--G----------C---CGC-------------------------------C---------------------------------------GSizeHit CountTotal NormTotal
No Reads
droBia1
TTAAGG-G--CGTGG---------CCGGGGCCCC-----------CAGGCAGCCCATCATCGCCAG-----------------------------------------------------------------------------CT--------------------------------------------------------------------------------------------------T-TACC---AGCAGCAGC---------------------------------------------------AGCAACAGCAG---CAACACCTGCAAC------------------------------------AGCAACATCAGC--------A------GCAGCAACAGCAACAT------------------------------CC---------------------G-------------------------------CAACA---GC---------------AGCAACACCTGCACCAGC---------AACATCA----GCAA------CC------AGC----TTACTACAT-------CAGC---------A----------ACTATAGC---------C---------ACA---TC---A---------G------------------CAGAAGAT------AC---AGCTACAGCGAG--------AAT----------C---TAA---------------------------------------------------------------------TGTSizeHit CountTotal NormTotal
No Reads
droTak1
TAGTCA-C-----------------CAGCATCA-----------------------------------TAGTCATC--------AT---CATC----------------------------------------------------A-----T---------CA-------------------------------------CCACCACAATC----------------------AC-----CA-T-CATC----ACAGCAGC---------------------------------------------------AGCAACA-----------------------------------------------------------------------------------ATAGCAACAACAGCAG------------------------------TA---------------------G---CAACAGC-------------------------------AACAG---------------C---AAC---------AGCAACAGCATCA----------------ACAAC-------------------------------------A---AC----------------------------AGCAGC---AGC---------------------------------AACAGCAACAGC---AGCAGCAACAAG-----------TTG----------T---ACGAGAACGAGT--------GCG---TCGCCTTGGCCCAGCAGCAACTGAGAGCAGCCGCTGCCCAGGCGGCGCASizeHit CountTotal NormTotal
No Reads
droEug1
TGGCGA-GGCAGTGA---------CCAAGACCA-----------------------------------TCACCGAGTTGAGAGTGC---CGAC------------------------------------------------------------------------------TATAA------------------------CGACCACAAAC----------------------AT-----CA-G-TAAC------------------------------------------------AGCCACAGCAAT---AGCA---ACACGAACAACACTAGCAAC------------------------------------AGCAACAGCAAC--------A------G---------------------------------------------CA------------------------------A----------------------------------------------------C---AGC---------AGCAACATCAACA-------------------------GCAACA-------GCAACAGCAGC---------AACATCAACGG-------------C---A---------------AC---AACAACAACAA------------------CAACAACAA---C------A------------GCAACAT--GTCGCGCCTTAT---A---------CAAC-----CAAGATATCG---CTT---------------------------------------TSizeHit CountTotal NormTotal
No Reads
dm3
TGGCTC--AGGTGCA---------GCAGCAGCA-----------------------------------GCAAC-----------A---------------------------------------------------------GCAGTTGCAACAGCAGCAGCA---------------------A----------------------------------CAGCAGTTGCAACA--GCAGC---AGCAACAG------------------C---------------------------------------------------------------------AGTTGCAAC------AGCAGC------AGCAACAGCT------CC-----------A------GCAG---------CTGC---------------AGCAACAGCAGTTCCAGCAGCAACAA------------TTGCA---G-------------------CAAC------AACAGTTC---------------C---------------------AGCAACAA----CAG------TT------GCA------------G----CAGCAGC---------AACA-------------GC---AGC---------A---------ACAGCA---------GC------------------AACAGCA---------GCAGCAACAGC---AGCAGCAA--C----------C---GGCTGTT---CAAT-------------CA---GTA---------------------------------------CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droSim2
CAGCAT-CAGGCGCA---------GCAGCAGCA-----------------------------------ACACG-----------C---------------------------------------------------------------GCAACAGCAGCAACA---------------------C----------------------------------GCGCAACAGCAGCA--ACATC---ATCTGCAC------------------A---------------------TGCA------------------------------------------------GCATGCGCAACATCATC------TGCACTTGTC------CC-----------A------TCAG---------CAGG---------------CGCAACAGCAGCACATGCAACA---------------------------C---TTGACACA----------------GCAACAG---------------C---AGC---------AGCAGCAGCAACA----------------ACAACAGCA------------G----CAGCAGC---------AACAGCAGCA----------------------------------GCAGCAACAACAACA------------------------------------GCCGCAACAGC---AGCAACAT--G-------------------------------------ACTTCC---TCA---------------------------------------GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------AACAGCAGCA----------------------------------GCAGCA...............................................................................................................................................................19200.05100000000000100000
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------G----CAGCAGC---------AACAGCAGCA----------------------------------GC...................................................................................................................................................................21200.05100000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA----------------ACAACAGCA------------G----CAGCAGC---------.................................................................................................................................................................................................................24200.05100000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA----------------------------------GCAGCAACAACAACA------------------------------------..................................................................................................................21200.05100000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA------------G----CAGCAGC---------AACAGC...........................................................................................................................................................................................................21200.05100000000000100000
droSec2
CGGACT-CGGCCGCT---------GCAGCC--A-----------------------------------ACGC-----------------CAT-------GGAGG-T------------------------------------GAT---GCACC------------------------AGCAGCAGCAGCAGC----------A---------------------GCAACAACA--G---------------------------------C---------------------------------------------------------AGCAGCAGCAACAGCA------------------------------------------AC--------A------G---CAGCAGCAGCAGGCGCACCACCACCATCCGCAACACGGAGTCCCGCCGCAGCAA------------CATGT---C-------------------CCGC------CCC------------------------------AGCAGC------AGCAG----------------CAACAACAGCA------------G-------------CAGCAACA-------------------------------CCATCATC---CGC---------------------------------AGCAGCAA---CCTCCTCCGCAGC-------------------------------A---------CA----------------------G---------------------------------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................A------------------------------------------AC--------A------G---CAGCAGCAGCAGGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310001
................................................................................................................................................................................................................................GCAACAACA--G---------------------------------C---------------------------------------------------------AGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020020
.................................................................................................................................................................................................................................CAACAACA--G---------------------------------C---------------------------------------------------------AGCAGCAGCAACAGCA------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................26170.0610010
......................................................................................................................................................................................................................................ACA--G---------------------------------C---------------------------------------------------------AGCAGCAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510001
.................................................................................................................................................................................................................................CAACAACA--G---------------------------------C---------------------------------------------------------AGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
..........................................................................................................................................................................................AGCAGC----------A---------------------GCAACAACA--G---------------------------------C---------------------------------------------------------AGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC------------------------------AGCAGC------AGCAG----------------CAACAACA.....................................................................................................................................................................................................................................................21200.0510010
..................................................................................................................................................................................................................................AACAACA--G---------------------------------C---------------------------------------------------------AGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
..................................................................................................................................................................................................................................AACAACA--G---------------------------------C---------------------------------------------------------AGCAGCAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------AGCAGC------AGCAG----------------CAACAAC......................................................................................................................................................................................................................................................19200.0510001
droYak3
CAACCT-GTTT---A---------CCAAAATCA-----------------------------------GC-----------------------------------CTGTGTATCAGCAACAGCAGCCAGTCTATCAGCAGCAACAGCC---------------T-------------------------------------------------------GTGCAACAGCAGCA--ACAAC---CTGTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGCAGCAACAGCCTG---------------------------TGCAACAGCAGCAACAGCCTGTGCAA----------------------------------CAGCAGC------------------AACAGC------------------CTGTG-------------------------CA------------A----CAGCAGC---------AACA-------------GCCTGTGC---------A---------ACAGCA---------GCAACAGTCTGTGCAACAGCAGCAAC--------------------------------AAC----------C---AGT---------------------------------------------------------------------ACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................AGCAGCA--ACAAC---CTGTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
...............................CA-----------------------------------GC-----------------------------------CTGTGTATCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........TT---A---------CCAAAATCA-----------------------------------GC-----------------------------------CTGTGTATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC---------A---------ACAGCA---------GCAACAGT..............................................................................................................................................1911.00101000000000
........TTT---A---------CCAAAATCA-----------------------------------GC-----------------------------------CTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.........TT---A---------CCAAAATCA-----------------------------------GC-----------------------------------CTGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.........................CAAAATCA-----------------------------------GC-----------------------------------CTGTGTATCAGCAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
......................................................................................................................ACAGCAGCCAGTCTATCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC---------A---------ACAGCA---------GCAACAGTCTGTG.........................................................................................................................................2411.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC---------A---------ACAGCA---------GCAACAGTCT............................................................................................................................................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------A---------ACAGCA---------GCAACAGTCT............................................................................................................................................1920.50101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------------------------CA------------A----CAGCAGC---------AACA-------------GCCTG...........................................................................................................................................................................................2250.40202000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAA----------------------------------CAGCAGC------------------AACAGC------------------CTG...............................................................................................................................................................................................................................................................................2250.40202000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAACAGCCT...........................................................................................................................................................................................................................................................................................................................................................................1950.40202000000000
.......................................................................................................................................................................................................................................................GCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.40202000000000
.....................................................................................................................................................................................................................................................GTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.40202000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------TGCAACAGCAGCAACAGCCTG..........................................................................................................................................................................................................................................................................................................................................................................2250.40202000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA----------------------------------CAGCAGC------------------AACAGC------------------CT................................................................................................................................................................................................................................................................................1950.40202000000000
.......................................................................................................................................................................................................................................................................................................................................................................G------TGCA--------------------------------ACAGCAGCAACAGCCTG---------------------------...............................................................................................................................................................................................................................................................................................................................................................................................2250.40202000000000
...............................................................................................................................................................................................................................................................................................................................................................................GCA--------------------------------ACAGCAGCAACAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................1950.40202000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------CA------------A----CAGCAGC---------AACA-------------GCCT............................................................................................................................................................................................1950.40202000000000
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAA----------------------------------CAGCAGC------------------AACAGC------------------CTGT..............................................................................................................................................................................................................................................................................2350.20101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAGCAGCAACAGCCTGT.........................................................................................................................................................................................................................................................................................................................................................................2250.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCCTGTGCA......................................................................................................................................................................................................................................................................................................................................................................2150.20101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG-------------------------CA------------A----CAGCAGC---------AACA-------------GC..............................................................................................................................................................................................2050.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCCTG---------------------------TGCAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................2950.20100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------CAGCAGC------------------AACAGC------------------CTGTG-------------------------CA------------......................................................................................................................................................................................................................................2150.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------TGCAACAGCAGCAACAGCCTGTGC.......................................................................................................................................................................................................................................................................................................................................................................2550.20101000000000
.....................................................................................................................................................................................................................................................................................................................................................................CTG------TGCA--------------------------------ACAGCAGCAACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2150.20100100000000
.......................................................................................................................................................................................................................................................................................................................................................................G------TGCA--------------------------------ACAGCAGCAACAGCCTG---------------------------TGC............................................................................................................................................................................................................................................................................................................................................................................................2550.20101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------------------------CA------------A----CAGCAGC---------AACA-------------GCCT............................................................................................................................................................................................2150.20101000000000
.......................................................................................................................................................................................................................................................................................................................................................................G------TGCA--------------------------------ACAGCAGCAACAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................2150.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------TGCAACAGCAGCAACAGCCTGT.........................................................................................................................................................................................................................................................................................................................................................................2350.20101000000000
......................................................................................................................................................................................................................................................TGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.20101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCCTGTG........................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-------------------------CA------------A----CAGCAGC---------AACA-------------GCCTGT..........................................................................................................................................................................................2250.20101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAA----------------------------------CAGCAGC------------------AACAGC------------------CTGT..............................................................................................................................................................................................................................................................................2250.20101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------------------------CA------------A----CAGCAGC---------AACA-------------GCCTGT..........................................................................................................................................................................................2350.20101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------A----CAGCAGC---------AACA-------------GCCTGTG.........................................................................................................................................................................................2050.20101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAGCAGCAACAGCCTGTG........................................................................................................................................................................................................................................................................................................................................................................2350.20101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-------------------------CA------------A----CAGCAGC---------AACA-------------GCCTGTG.........................................................................................................................................................................................2350.20101000000000
......................................................................................................................................................................................................................................................TGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------TG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.20101000000000
.................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------ACAGCAGCAACAGCCTG---------------------------TG.............................................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAA----------------------------------CAGCAGC------------------AACAGC------------------CTGTG-------------------------....................................................................................................................................................................................................................................................2350.20101000000000
...................................................................................................................................................................................................................................................CTGTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------------------------CA------------A----CAGCAGC---------AACA-------------GCCTGTGC---------...............................................................................................................................................................................2550.20101000000000
.......................................................................................................................................................................................................................................................................................................................................................................G------TGCA--------------------------------ACAGCAGCAACAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------CAGCAGC------------------AACAGC------------------CTGTG-------------------------CA------------A----CAGCAGC---------.................................................................................................................................................................................................................2950.20100100000000
......................................................................................................................................................................................................................................................................................................................................................................TG------TGCA--------------------------------ACAGCAGCAACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------TGCAACAGCAGCAACAGCCT...........................................................................................................................................................................................................................................................................................................................................................................2150.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------TGCAACAGCAGCAACAGCC............................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------------------------------CAGCAGC------------------AACAGC------------------CTGTG-------------------------....................................................................................................................................................................................................................................................2050.20101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCAA----------------------------------CAGCAGC------------------AACAGC------------------..................................................................................................................................................................................................................................................................................2150.20100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAA----------------------------------CAGCAGC------------------AACAGC------------------CT................................................................................................................................................................................................................................................................................2150.20101000000000
.....................................................................................................................................................................................................................................................GTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----CAGCAGC---------AACA-------------GCCTGTGC---------A---------ACAGCA---------GC....................................................................................................................................................2950.20100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCCTGTGCAA----------------------------------CAGCAGC------------------..........................................................................................................................................................................................................................................................................................................2950.20100100000000
.....................................................................................................................................................................................................................................................GTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.20101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----CAGCAGC---------AACA-------------GCCTGTGC---------A---------.....................................................................................................................................................................2150.20101000000000
..........................................................................................................................................................................................................................................................ACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2950.20100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAA----------------------------------CAGCAGC------------------AACAGC------------------CTGTG-------------------------C...................................................................................................................................................................................................................................................2550.20101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAA----------------------------------CAGCAGC------------------AACAGC------------------..................................................................................................................................................................................................................................................................................2050.20101000000000
..........................................................................................................................................................................................................................................................ACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTG---------------------------TGCAACAGCAGCAACAGC.............................................................................................................................................................................................................................................................................................................................................................................2150.20100100000000
..............................................................................................................................................................................................................................................................................................................................................................................TGCA--------------------------------ACAGCAGCAACAGCCTG---------------------------TG.............................................................................................................................................................................................................................................................................................................................................................................................2350.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCCTG---------------------------TGCA...........................................................................................................................................................................................................................................................................................................................................................................................2150.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAA----------------------------------CAGCAGC------------------AACAGC------------------C.................................................................................................................................................................................................................................................................................2050.20101000000000
.......................................................................................................................................................................................................................................................................................................................................................................G------TGCA--------------------------------ACAGCAGCAACAGCCTG---------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................2350.20101000000000
....................................................................................................................................................................................................................................................TGTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
.....................................................................................................................................................................................................................................................GTGCAACAGCA------------GCA---------------------------------------------------------------------------AC------AGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTG-------------------------CA------------A----CAGCAGC---------AACA-------------GC..............................................................................................................................................................................................2150.20100100000000
..............................................................................................................................................................................................................................................................................................................................................................................TGCA--------------------------------ACAGCAGCAACAGCCTG---------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................2250.20101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------TGCAACAGCAGCAACAGC.............................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
.........................................................................................................................................................................................................................................................AACAGCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------TG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------------------------CA------------A----CAGCAGC---------AACA-------------GCC.............................................................................................................................................................................................2050.20101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCCTGTGCAA----------------------------------CA.................................................................................................................................................................................................................................................................................................................................1960.17101000000000
..........................................................................................................................................AGCAACAGCC---------------T-------------------------------------------------------GTGCAACAGCAGCA--ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.17101000000000
.............................................................................................................................................AACAGCC---------------T-------------------------------------------------------GTGCAACAGCAGCA--ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------AACA-------------GCCTGTGC---------A---------ACAGC................................................................................................................................................................2060.17101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------GCCTGTGC---------A---------ACAGCA---------GCAACA................................................................................................................................................2560.17101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCTG---------------------------TGCAACAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................2560.17101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCCTGTGCAA----------------------------------CAGCAGC------------------AACA......................................................................................................................................................................................................................................................................................................2860.17101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------AACA-------------GCCTGTGC---------A---------ACAGCA---------GCA...................................................................................................................................................2560.17101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCCTG---------------------------TGCAACAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................2860.17101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------AACAGC------------------CTGTG-------------------------CA------------A----CAGCAGC---------A................................................................................................................................................................................................................2560.17101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCTGTGCAA----------------------------------CAGCAGC------------------AACA......................................................................................................................................................................................................................................................................................................2560.17101000000000
..........................................................................................................................................AGCAACAGCC---------------T-------------------------------------------------------GTGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCCTG---------------------------TGCAACA........................................................................................................................................................................................................................................................................................................................................................................................1960.17101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCCTGTGCAA----------------------------------CAGCAGC------------------..........................................................................................................................................................................................................................................................................................................2660.17101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCTGTGCAA----------------------------------CAGC...............................................................................................................................................................................................................................................................................................................................1860.17101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCTGTGCAA----------------------------------CAGCA..............................................................................................................................................................................................................................................................................................................................1960.17101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCCTGTGCAA----------------------------------CAGCAGC------------------A.........................................................................................................................................................................................................................................................................................................2560.17101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCCTG---------------------------TGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................2060.17101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------AACAGC------------------CTGTG-------------------------CA------------A----CAGCAGC---------.................................................................................................................................................................................................................2660.17101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCCTGTGCAA----------------------------------CAGC...............................................................................................................................................................................................................................................................................................................................2060.17101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---------AACA-------------GCCTGTGC---------A---------ACAGCA---------GC....................................................................................................................................................2660.17101000000000
.............................................................................................................................................AACAGCC---------------T-------------------------------------------------------GTGCAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.17101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCTG---------------------------TGCAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................1960.17101000000000
.............................................................................................................................................AACAGCC---------------T-------------------------------------------------------GTGCAACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCTG---------------------------TGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................1860.17101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------AACAGC------------------CTGTG-------------------------CA------------A----CAGC.............................................................................................................................................................................................................................2060.17101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCCTG---------------------------TGCAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................2660.17101000000000
...............................................................................................................................................................................................................................................................A------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------AACA-------------GCCTGTGC---------A---------ACAGCA---------GCAACA................................................................................................................................................2860.17101000000000
........................................................................................................................................GCAGCAACAGCC---------------T-------------------------------------------------------GTGCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCCTG---------------------------TGCAACAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................2560.17101000000000
..........................................................................................................................................AGCAACAGCC---------------T-------------------------------------------------------GTGCAACAGCAGCA--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17101000000000
...........................................................................................................................................GCAACAGCC---------------T-------------------------------------------------------GTGCAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.17101000000000
...............................................................................................................................................................................................................................................................A------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACA........................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------AACAGC------------------CTGTG-------------------------CA------------A----CAGCAGC---------AACA-------------................................................................................................................................................................................................2860.17101000000000
............................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2060.17101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------------------CTGTG-------------------------CA------------A----CAGCAGC---------AACA-------------................................................................................................................................................................................................2560.17101000000000
..............................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................2560.17101000000000
...............................................................................................................................................................................................................................................................A------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................2860.17101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------AACAGC------------------CTGTG-------------------------CA------------A----CA...............................................................................................................................................................................................................................1960.17101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------GCCTGTGC---------A---------ACAGCA---------......................................................................................................................................................1960.17101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------GCCTGTGC---------A---------ACAGC................................................................................................................................................................1860.17101000000000
..............................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------------------CTGTG-------------------------CA------------A----CAGCA............................................................................................................................................................................................................................1960.17101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------AACA-------------GCCTGTGC---------A---------ACA..................................................................................................................................................................1960.17101000000000
.............................................................................................................................................................................................................................................................GCA------------GCA---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17101000000000
..............................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------AC------AGCCTG------TGCA--------------------------------ACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................1860.17101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------------------CTGTG-------------------------CA------------A----CAGC.............................................................................................................................................................................................................................1860.17101000000000
droEre2
TCGCAT-CAGCAGCA---------GCAGCAGCT-------------------------------------------------------------------------------------------------------------------GCTTCAGCAGCAGCA---------------------A----------------------------------CTTCAGCAGCAGCA--GCAGC---AACTTCAG------------------C---------------------------------------------------------------------AGCAGCATCAGC---AGCAGC------TGCA---GCA------TC-----------A------ACAG---------CAGC---------------TGCAACATCAACAGCAGCTGCAGCAT------------CAACA---G-------------------CAGC------TGC------------------------------------------AGCAT-------CAA---------------C---ACCAACTGCAG----CAGCAGCAGC------ATCA-------------GC---AGC---------A---------GCTGCA---------GC------------------ATCAGCA---------TCACCAACAGC---AGCAGT---------------------------------ACGCAGACGATACC----------------------------------------------GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------TCACCAACAGC---AGCAGT---------------------------------ACGCAGAC.....................................................2611.0010000100
..................................................................................................................................................................A---------------------A----------------------------------CTTCAGCAGCAGCA--GCAGC---A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCTGCAGCAT------------CAACA---.............................................................................................................................................................................................................................................................................................................................................................1930.3310001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---G-------------------CAGC------TGC------------------------------------------AGCAT-------CAA---------------C---A...............................................................................................................................................................................................................................................1930.3310001000
.CGCAT-CAGCAGCA---------GCAGCAGCT-------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310001000
..................................................................................................................................................................................................................................................................................................................................................................AGCAGC------TGCA---GCA------TC-----------A------ACA........................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310001000
...................................................................................................................................................................................................................................GCAGCA--GCAGC---AACTTCAG------------------C---------------------------------------------------------------------AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000
.....................................................................................................................................................................................................................................AGCA--GCAGC---AACTTCAG------------------C---------------------------------------------------------------------AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010000010
.........................................................................................................................................................AGCAGCAGCA---------------------A----------------------------------CTTCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010000010
...........................................................................................................................................................................................................................CTTCAGCAGCAGCA--GCAGC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.1320010010
.............................................................................................................................................................GCAGCA---------------------A----------------------------------CTTCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1311000000
...........................................................................................................................................................................................................................................GCAGC---AACTTCAG------------------C---------------------------------------------------------------------AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1311000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG----CAGCAGCAGC------ATCA-------------GC---A..........................................................................................................................................................................................21200.1020000200
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----CAGCAGCAGC------ATCA-------------GC---A..........................................................................................................................................................................................20200.1022000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG----CAGCAGCAGC------ATCA-------------GC---AGC---------A---------GC...................................................................................................................................................................26200.0511000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC------ATCA-------------GC---AGC---------A---------GC...................................................................................................................................................................21200.0511000000

Generated: 05/17/2015 at 10:53 PM