ID:

dmo_705

 Coordinate:

scaffold_6473:8641759-8641909 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.1 -20.9 -20.7 -20.6

Flybase annnotation

exon [dmoj_GLEANR_16410:3]; CDS [Dmoj\GI15692-cds]; intron [Dmoj\GI15692-in]

Repeatable elements

NameClassFamilyStrand
Helena_DsLINEJockey+
mature
  1. scaffold_885:585-610 -
  2. scaffold_1873:366-391 +
  3. scaffold_3958:1924-1949 +
  4. scaffold_4387:1274-1299 +
  5. scaffold_4387:5303-5328 +
  6. dmo_705  scaffold_6473:8641771-8641796 +
  7. scaffold_6496:24408984-24409009 -
  8. scaffold_6498:349008-349033 +
  9. scaffold_6500:2826033-2826058 +
  10. scaffold_6540:6788518-6788543 -
  11. scaffold_6541:1321971-1321996 -
star
  1. scaffold_885:488-511 -
  2. scaffold_1873:465-488 +
  3. scaffold_3958:2023-2046 +
  4. scaffold_4387:1373-1396 +
  5. scaffold_4387:5402-5425 +
  6. scaffold_6463:4150-4173 -
  7. dmo_705  scaffold_6473:8641870-8641893 +
  8. scaffold_6482:2244106-2244129 -
  9. scaffold_6496:24408887-24408910 -
  10. scaffold_6498:349107-349130 +
  11. scaffold_6500:2826132-2826155 +
  12. scaffold_6540:6788421-6788444 -
  13. scaffold_6541:1321874-1321897 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCTCGAAAGCTGTCATATGCTGATGATATTGCCATCATCTATAACTCAAAAAACGTGGTTGAAGCAAGTACAGGACTACAGAGATATCTGGATACTCTCGCTGATTGGTGCAAGCGGTGGAATCTCAAAGTTAACCCGCTAAAAACATTGAACCCTTGCTTCACTCTAAAAAGGCTGGCAATGCATACCCCCCCAATCCAGATGTCGGGAGTAACCCTACAGCAACCTGCTCAGGTGAAATATCTTGGCAT
**************************************************************..........................((......((.(((....((((.((((((.((....((((.(((...........))).)))).)).)))))))))).......))).)).....))****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
..............................................................AGCAAGTACAGGACTACAGAGATATC................................................................................................................................................................... 26 0 11 2.00 22 20 2 0 0 0
..............................................................AGCAAGTACAGGACTACAGAGATA..................................................................................................................................................................... 24 0 11 1.55 17 17 0 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATGCA.................................................................. 24 0 13 1.08 14 14 0 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATGC................................................................... 23 0 13 1.00 13 13 0 0 0 0
..............................................................AGCAAGTACAGGACTACAGAGA....................................................................................................................................................................... 22 0 11 0.73 8 8 0 0 0 0
.......................................................................................................................GAATCTCAAAGTTAACCCGCTAAAAACA........................................................................................................ 28 0 8 0.63 5 5 0 0 0 0
..............................................................AGCAAGTACAGGACTACAGAGAT...................................................................................................................................................................... 23 0 11 0.55 6 6 0 0 0 0
.CTCGAAAGCTGTCATATGCTGAT................................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
......AAGCTGTCATATGCTGATGA................................................................................................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0
.....AAAGCTGTCATATGCTGATGATATTGCC.......................................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATG.................................................................... 22 0 13 0.38 5 4 1 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATGCATACC.............................................................. 28 0 12 0.33 4 4 0 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATGCAT................................................................. 25 0 13 0.31 4 4 0 0 0 0
............................................................................................................................................................................................................TCGGGAGTAACCCTACAGCAACCTGC..................... 26 0 11 0.27 3 1 2 0 0 0
...............................................................GCAAGTACAGGACTACAGAGATATCT.................................................................................................................................................................. 26 0 11 0.27 3 3 0 0 0 0
...............................................................GCAAGTACAGGACTACAGAGATATC................................................................................................................................................................... 25 0 11 0.27 3 3 0 0 0 0
....................................................................................................................................................................................................TCCAGATGTCGGGAGTAACCCTACAGC............................ 27 0 11 0.27 3 0 3 0 0 0
..............................................................................................................................................................CTTCACTCTAAAAAGGCTGGCA....................................................................... 22 0 12 0.25 3 2 1 0 0 0
..................................TCATCTATAACTCAAAAAACGTGG................................................................................................................................................................................................. 24 0 11 0.18 2 2 0 0 0 0
..................................TCATCTATAACTCAAAAAACGTG.................................................................................................................................................................................................. 23 0 11 0.18 2 2 0 0 0 0
..............................................................AGCAAGTACAGGACTACAGAGATAT.................................................................................................................................................................... 25 0 11 0.18 2 2 0 0 0 0
......................................................................................TCTGGATACTCTCGCTGATTGGTG............................................................................................................................................. 24 0 6 0.17 1 1 0 0 0 0
...............................................................................................................................................................TTCACTCTAAAAAGGCTGGCAATGC................................................................... 25 0 12 0.17 2 1 1 0 0 0
..................................................................................................................................................................ACTCTAAAAAGGCTGGCAATGC................................................................... 22 0 13 0.15 2 2 0 0 0 0
..................................................................................................................................................................ACTCTAAAAAGGCTGGCAATGCA.................................................................. 23 0 13 0.15 2 2 0 0 0 0
............................................................................................TACTCTCGCTGATTGGTGCAA.......................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0
............................................................................................TACTCTCGCTGATTGGTGCAAGC........................................................................................................................................ 23 0 8 0.13 1 1 0 0 0 0
.....................................................................................................................................ACCCGCTAAAAACATTGAACCCTTG............................................................................................. 25 0 9 0.11 1 1 0 0 0 0
.........................................................................................................TGGTGCAAGCGGTGGAAT................................................................................................................................ 18 0 9 0.11 1 1 0 0 0 0
...........................................................................................................................CTCAAAGTTAACCCGCTAAAAACA........................................................................................................ 24 0 10 0.10 1 1 0 0 0 0
...............................CCATCATCTATAACTCAAAAAACGTGG................................................................................................................................................................................................. 27 0 10 0.10 1 1 0 0 0 0
..................................TCATCTATAACTCAAAAAACGTGGTT............................................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0
............................................................................................................................TCAAAGTTAACCCGCTAAAAACATTG..................................................................................................... 26 0 10 0.10 1 1 0 0 0 0
...............................CCATCATCTATAACTCAAAAAACGTG.................................................................................................................................................................................................. 26 0 10 0.10 1 1 0 0 0 0
..................................................................AGTACAGGACTACAGAGATATCTGGA............................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0
..................................TCATCTATAACTCAAAAAACGTGGT................................................................................................................................................................................................ 25 0 11 0.09 1 1 0 0 0 0
............................................CTCAAAAAACGTGGTTGA............................................................................................................................................................................................. 18 0 11 0.09 1 1 0 0 0 0
...........................................................................................................................................................................................................CTCGGGAGTAACCCTACAGCAACCTGC..................... 27 1 11 0.09 1 1 0 0 0 0
....................................................................................................CTGGTTGATGCAAGTGGTGGA.................................................................................................................................. 21 3 11 0.09 1 0 0 1 0 0
.................................ATCATCTATAACTCAAAAAACGTGG................................................................................................................................................................................................. 25 0 11 0.09 1 1 0 0 0 0
...............................................................GCAAGTACAGGACTACAGA......................................................................................................................................................................... 19 0 11 0.09 1 1 0 0 0 0
...........................................................................................................................................................TTGCTTCACTCTAAAAAGGCTGAC........................................................................ 24 1 11 0.09 1 0 1 0 0 0
...................................................................................................................................................TTGAACCCTTGCTTCACTCTAAAAAG.............................................................................. 26 0 11 0.09 1 1 0 0 0 0
...............................................................GCAAGTACAGGACTACAGAGAT...................................................................................................................................................................... 22 0 11 0.09 1 1 0 0 0 0
................................................................CAAGTACAGGACTACAGAGATAT.................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0
..............................................................AGCGAGTACAGGACTACAGAGATATC................................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0
..............................................................AGCAAGTACAGGACTACAGAGATAC.................................................................................................................................................................... 25 1 11 0.09 1 1 0 0 0 0
...............................................................GCAAGTACAGGACTACAGAGA....................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0
..............................................................AGCAAGTACAGGACTACAGAGATATA................................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0
..............................................................AGCAAGTACAGGACTACAGAGATT..................................................................................................................................................................... 24 1 11 0.09 1 1 0 0 0 0
..............................................................ATCAAGTACAGGACTACAGAGAT...................................................................................................................................................................... 23 1 11 0.09 1 1 0 0 0 0
..............................................................AACAAGTACAGGACTACAGAGATATC................................................................................................................................................................... 26 1 11 0.09 1 0 0 1 0 0
..............................................................AGCAAGTACAGGACTACAGGGATATC................................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0
.................................ATCATCTATAACTCAAAAAACGTGGT................................................................................................................................................................................................ 26 0 11 0.09 1 1 0 0 0 0
.......................................................................................................................................................ACCCTTGCTTCACTCTAAAAAGGCT........................................................................... 25 0 11 0.09 1 1 0 0 0 0
..............................................................AGCAAGTACAGGACTACAGAGCTATC................................................................................................................................................................... 26 1 11 0.09 1 0 0 0 1 0
.............................................................GAGCAAGTACAGGACTACAGAGATATC................................................................................................................................................................... 27 1 11 0.09 1 1 0 0 0 0
..............................................................AACAAGTACAGGACTACAGAGA....................................................................................................................................................................... 22 1 11 0.09 1 0 1 0 0 0
.............................................................................................................................................................GCTTCACTCTAAAAAGGCTGG......................................................................... 21 0 11 0.09 1 1 0 0 0 0
..............................................................................................................................................................CTTCACTCTAAAAAGGCTGGCAATGCAT................................................................. 28 0 12 0.08 1 1 0 0 0 0
....................................................................................................CTAGTTGATGCAAGCGGTGGA.................................................................................................................................. 21 3 12 0.08 1 0 0 1 0 0
..............................................................................................................................................................CTTCACTCTAAAAAGGCTGGC........................................................................ 21 0 12 0.08 1 1 0 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATGCATACCC............................................................. 29 0 12 0.08 1 0 1 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATGCATAC............................................................... 27 0 12 0.08 1 1 0 0 0 0
..............................................................................................................................................................CTTCACTCTAAAAAGGCTGG......................................................................... 20 0 12 0.08 1 1 0 0 0 0
.....................................................................................................................................................................................................................................CTCAGGTGAAATATCTTGGCAT 22 0 12 0.08 1 1 0 0 0 0
..............................................................................................................................................................CTTCACTCTAAAAAGGCTGGCAATGC................................................................... 26 0 12 0.08 1 1 0 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATGCATA................................................................ 26 0 12 0.08 1 1 0 0 0 0
................................................................................................................................................................TCACTCTAAAAAGGCTGGCAATG.................................................................... 23 0 13 0.08 1 1 0 0 0 0
................................................................................................................................................................GCACTCTAAAAAGGCTGGCAATGCAT................................................................. 26 1 13 0.08 1 1 0 0 0 0
.................................................................................................................................................................CACTCTAAAAAGGCTGGCAATGCATT................................................................ 26 1 13 0.08 1 1 0 0 0 0
.....................................................................................................................................................................CTAAAAAGGCTGGCAATGCAT................................................................. 21 0 15 0.07 1 1 0 0 0 0
..........................................................................................GGTACTCTTGCTGAGTGGT.............................................................................................................................................. 19 3 19 0.05 1 0 0 1 0 0
.........................................................................................................................................................................................................ACGGCGGGAGTAACCCTG................................ 18 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GGAGCTTTCGACAGTATACGACTACTATAACGGTAGTAGATATTGAGTTTTTTGCACCAACTTCGTTCATGTCCTGATGTCTCTATAGACCTATGAGAGCGACTAACCACGTTCGCCACCTTAGAGTTTCAATTGGGCGATTTTTGTAACTTGGGAACGAAGTGAGATTTTTCCGACCGTTACGTATGGGGGGGTTAGGTCTACAGCCCTCATTGGGATGTCGTTGGACGAGTCCACTTTATAGAACCGTA
******************************************************************..........................((......((.(((....((((.((((((.((....((((.(((...........))).)))).)).)))))))))).......))).)).....))************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
 V056
head
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTT............ 24 0 13 18.62 242 127 104 11 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACTT............ 25 0 13 10.23 133 53 76 4 0 0 0
.....................................................................................................................................................................................................................TGGGATGTCGTTGGACGAGTCCACTT............ 26 0 13 4.92 64 63 0 1 0 0 0
......................................................................................................CTAACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 27 0 9 4.44 40 21 19 0 0 0 0
.........................................................................................................ACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 24 0 9 3.22 29 16 13 0 0 0 0
........................................................................................................................................................................................................................GATGTCGTTGGACGAGTCCACTT............ 23 0 13 3.08 40 37 0 3 0 0 0
..............................................GTTTTTTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 26 0 10 2.40 24 23 0 0 0 0 1
.................................................................................................................................................GTAACTTGGGAACGAAGTGAGATTTT................................................................................ 26 0 10 2.30 23 21 0 2 0 0 0
..................................................................................................................................................TAACTTGGGAACGAAGTGAGATTTT................................................................................ 25 0 10 1.60 16 12 2 2 0 0 0
............................................GAGTTTTTTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 28 0 10 1.50 15 13 1 1 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACGT............ 24 1 13 1.38 18 0 18 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACGT............ 25 1 13 1.23 16 0 16 0 0 0 0
..........................................................................................................CCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 23 0 9 1.00 9 4 5 0 0 0 0
.......................................................................................................TAACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 26 0 9 1.00 9 5 4 0 0 0 0
........................................................................................................AACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 25 0 9 0.78 7 5 2 0 0 0 0
.........................................................................................................................................................................................................................ATGTCGTTGGACGAGTCCACTT............ 22 0 13 0.77 10 7 0 3 0 0 0
....................................................................................................................................................ACTTGGGAACGAAGTGAGATTTT................................................................................ 23 0 11 0.64 7 3 0 4 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACT............. 23 0 13 0.62 8 8 0 0 0 0 0
................................................................................................................................................TGTAACTTGGGAACGAAGTGAGATTTT................................................................................ 27 0 10 0.60 6 6 0 0 0 0 0
......................................................................................................CTAACCACGTTCGCCACCTTAGAGTGT.......................................................................................................................... 27 1 9 0.56 5 0 5 0 0 0 0
...................................................................................................................................................AACTTGGGAACGAAGTGAGATTTT................................................................................ 24 0 11 0.55 6 6 0 0 0 0 0
.............................................AGTTTTTTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 27 0 10 0.50 5 5 0 0 0 0 0
.........................TAGAAGGGTAGTAGCTATTGAG............................................................................................................................................................................................................ 22 3 10 0.50 5 1 0 4 0 0 0
..............................................................................GTCTCTATAGACCTATGAGAGCGACT................................................................................................................................................... 26 0 8 0.50 4 4 0 0 0 0 0
..........................................................................................................................................................................................................................TGTCGTTGGACGAGTCCACTT............ 21 0 13 0.46 6 4 0 0 2 0 0
.............................................................................................................CGTTCGCCACCTTAGAGTTTCAAT...................................................................................................................... 24 0 11 0.45 5 3 2 0 0 0 0
.........................................................................................................ACCACGTTCGCCACCTTAGAGTGT.......................................................................................................................... 24 1 9 0.44 4 0 4 0 0 0 0
.........................................................................................................................................................................................ATGGGGGGGTTAGGTCTACAGCCCT......................................... 25 0 10 0.40 4 4 0 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTTT........... 25 0 13 0.38 5 2 3 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCAATT............ 24 1 13 0.38 5 0 5 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTTC........... 25 1 13 0.38 5 0 5 0 0 0 0
...........................................TGAGTTTTTTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 29 0 9 0.33 3 3 0 0 0 0 0
.....................................................................................................ACTAACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 28 0 9 0.33 3 2 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACTTT........... 26 0 13 0.31 4 2 2 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCAATT............ 25 1 13 0.31 4 0 4 0 0 0 0
...............................................TTTTTTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 25 0 10 0.30 3 3 0 0 0 0 0
.................................................................................................................................................CTAACTTGGGAACGAAGTGAGATTTT................................................................................ 26 1 10 0.30 3 1 0 2 0 0 0
............................................................................................................ACGTTCGCCACCTTAGAGTTTCAAT...................................................................................................................... 25 0 8 0.25 2 2 0 0 0 0 0
.....................................................................................................................................................................................................................TGGGATGTCGTTGGACGAGTCCACT............. 25 0 13 0.23 3 3 0 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACTTC........... 26 1 13 0.23 3 0 3 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCATTT............ 24 1 13 0.23 3 0 3 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACT............. 24 0 13 0.23 3 2 1 0 0 0 0
....................................................................................................GACTAACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 29 0 9 0.22 2 2 0 0 0 0 0
......................................................................................................CTAACCACGTTCGCCACCTTAGAGCTT.......................................................................................................................... 27 1 9 0.22 2 0 2 0 0 0 0
.......................................................................................................TAACCACGTTCGCCACCTTAGAGTGT.......................................................................................................................... 26 1 9 0.22 2 0 2 0 0 0 0
.........................................................................................................ACCACGTTCGCCACCTTAGAGTT........................................................................................................................... 23 0 9 0.22 2 2 0 0 0 0 0
.......................................................................................................TAACCACGTTCGCCACCTTAGAGTT........................................................................................................................... 25 0 9 0.22 2 2 0 0 0 0 0
...........................................................................................................CACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 22 0 9 0.22 2 1 1 0 0 0 0
...........................................................................................................CACGTTCGCCACCTTAGAGTGT.......................................................................................................................... 22 1 9 0.22 2 0 2 0 0 0 0
................................................................................................................................................TGTAACTTGGGAACGAAGTGAGAT................................................................................... 24 0 10 0.20 2 2 0 0 0 0 0
..............................................................................................................................................TTTGTAACTTGGGAACGAAGTGAGAT................................................................................... 26 0 10 0.20 2 1 0 1 0 0 0
.............GTATACGACTACTATAACGGTAGTAGAT.................................................................................................................................................................................................................. 28 0 10 0.20 2 2 0 0 0 0 0
...............................................................................................................................................TTGTAACTTGGGAACGAAGTGAGATT.................................................................................. 26 0 10 0.20 2 2 0 0 0 0 0
.........................................................................................................ACCACTTTCGCCACCCTA................................................................................................................................ 18 2 11 0.18 2 2 0 0 0 0 0
......................................................................................................................................................TTGGGAACGAAGTGAGATTTT................................................................................ 21 0 11 0.18 2 2 0 0 0 0 0
.....................................................................................................................................................CTTGGGAACGAAGTGAGATTTT................................................................................ 22 0 11 0.18 2 2 0 0 0 0 0
................................................TTTTTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 24 0 12 0.17 2 1 1 0 0 0 0
...................................................TTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 21 0 12 0.17 2 1 1 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCC................ 20 0 13 0.15 2 0 2 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGGCGAGTCCACTT............ 25 1 13 0.15 2 2 0 0 0 0 0
......................................................................................................................................................................................................................CGGATGTCGTTGGACGAGTCCACTT............ 25 1 13 0.15 2 0 2 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTTGACGAGTCCACTT............ 24 1 13 0.15 2 0 2 0 0 0 0
.........................................................................................................ACCACTGTCGCCACCTTA................................................................................................................................ 18 2 13 0.15 2 0 0 1 0 1 0
.......................................................................................................................................................................................................................CGATGTCGTTGGACGAGTCCACTT............ 24 1 13 0.15 2 0 2 0 0 0 0
.........................................................................CTGATGTCTCTATAGACCTATGAGAGCGA..................................................................................................................................................... 29 0 8 0.13 1 1 0 0 0 0 0
............................................................................ATGTCTCTATAGACCTATGAGAGCGA..................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0 0
.........................................................................................................ACCACGTTCGCCACCTTAGAGTTTCAATT..................................................................................................................... 29 0 8 0.13 1 0 1 0 0 0 0
........................................................................................................AACCACGTTCGCCACCTTAGAGTTTCAAT...................................................................................................................... 29 0 8 0.13 1 1 0 0 0 0 0
......................................................................................................CTAACCACGTTCGCCACCTTAGAGTT........................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0 0
........................................................................................................AACCACGTTCGCCACCTTAGAGT............................................................................................................................ 23 0 9 0.11 1 1 0 0 0 0 0
.....................................................................................................ACCAACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 28 1 9 0.11 1 1 0 0 0 0 0
........................................................................................................AACCACGTTCGCCACCTTAGAGTTTC......................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0 0
.......................................................................................................TAACCACGTTCGCCAACTTAGAGTTT.......................................................................................................................... 26 1 9 0.11 1 0 1 0 0 0 0
..........................................................................................................CCACGTTCGCCACCTTAGAGCGT.......................................................................................................................... 23 2 9 0.11 1 0 1 0 0 0 0
....................................................................................................GACTAACCACGTTCGCCACCTTAGAGTT........................................................................................................................... 28 0 9 0.11 1 1 0 0 0 0 0
.......................................................................................................CAACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 26 1 9 0.11 1 0 1 0 0 0 0
..........................................................................................................CCACATTCGCCACCTTAGAGTTT.......................................................................................................................... 23 1 9 0.11 1 0 1 0 0 0 0
......................................................................................................TTAACCACGTTCGCCACCTTAGAGTGT.......................................................................................................................... 27 2 9 0.11 1 0 1 0 0 0 0
....................................................................................................CACTAACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 29 1 9 0.11 1 0 1 0 0 0 0
.........................................................................................................ACCACGTTCGCCATCTTAGAGTGT.......................................................................................................................... 24 2 9 0.11 1 0 1 0 0 0 0
.........................................................................................................ACCACGTTCGCCACCTTAGATTTT.......................................................................................................................... 24 1 9 0.11 1 0 1 0 0 0 0
..........................................................................................................CCACGTTCGCCACCTTAGAGTGT.......................................................................................................................... 23 1 9 0.11 1 0 1 0 0 0 0
..........................................................................................................CCACGTTCGCCACCTTAGAGTT........................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0 0
.......................................................................................................TAACCACGTTCGCCACCTTAGAGCTT.......................................................................................................................... 26 1 9 0.11 1 0 1 0 0 0 0
..........................................................................................................CCACGTTCGCCACCTTAGATTGT.......................................................................................................................... 23 2 9 0.11 1 0 1 0 0 0 0
....................................................................................................AACTAACCACGTTCGCCACCTTAGAGTT........................................................................................................................... 28 1 9 0.11 1 1 0 0 0 0 0
.......................................................................................................CAACCACGTTCGCCACCTTAGATTGT.......................................................................................................................... 26 3 9 0.11 1 0 1 0 0 0 0
.................................................................................................................CGCCACCTTAGAGTTTCAATTGGGCGATT............................................................................................................. 29 0 9 0.11 1 1 0 0 0 0 0
.......................................................................................................TAACCACGTTCGCCACCTTAGAGTTTC......................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0 0
........................................................................................................AACCACGTTCGCCACCTTAGAGTTTCA........................................................................................................................ 27 0 9 0.11 1 0 1 0 0 0 0
.....................................................................................................ACTGACCACGTTCGCCACCTTAGAGTTT.......................................................................................................................... 28 1 9 0.11 1 0 1 0 0 0 0
.........................................................................................................ACCACGTTCGCCACCTTAGA.............................................................................................................................. 20 0 9 0.11 1 1 0 0 0 0 0
......................................................................................................CTAACCACGTTTGCCACCTTAGAGTTT.......................................................................................................................... 27 1 9 0.11 1 0 1 0 0 0 0
..............................................GTTTTTTGCACCAACTTCGTTCATGTT.................................................................................................................................................................................. 27 1 10 0.10 1 1 0 0 0 0 0
...............................................................................................................................................TTGTAACTTGGGAACGAAGTGGGATTTT................................................................................ 28 1 10 0.10 1 1 0 0 0 0 0
.......................ACTATAACGGTAGTAGATATTGAGTTT......................................................................................................................................................................................................... 27 0 10 0.10 1 1 0 0 0 0 0
...............................................................................................................................................TTGTAACTTGGGAACGAAGTGAGAT................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0
...............CTACGACTACTATAACGGTAGT...................................................................................................................................................................................................................... 22 1 10 0.10 1 0 1 0 0 0 0
..........................AGAAGGGTAGTAGCTATTGAG............................................................................................................................................................................................................ 21 3 10 0.10 1 0 0 1 0 0 0
..................................................................................................................................................TAACTTGGGAACGAAGTGAGATTGT................................................................................ 25 1 10 0.10 1 0 1 0 0 0 0
................................................................................................................................................TGTAACTTGGGAACGAAGTGAGA.................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0
......................TACTATAACGGTAGTAGATATTGAGTTT......................................................................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0 0
................................................................................................................................................TGTAACTTGGGAACGAAGTGAGATT.................................................................................. 25 0 10 0.10 1 1 0 0 0 0 0
........................................................................CCTGATGTCTCTATAGACCTA.............................................................................................................................................................. 21 0 10 0.10 1 1 0 0 0 0 0
..............................................GTTTTTTGCACCAACTTCGTTCATG.................................................................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0
..................................................................................................................................................TAACTTGGGAACGAAGTGAGATTTTT............................................................................... 26 0 10 0.10 1 1 0 0 0 0 0
...............................................................................................................................................TTGTAACTTGGGAACGAAGTGAGATTT................................................................................. 27 0 10 0.10 1 1 0 0 0 0 0
................................................................................................................TCGCCACCTTAGAGTTTCAATTGGG.................................................................................................................. 25 0 10 0.10 1 1 0 0 0 0 0
................................................................GTTCATGTCCTGATGTCTCTATAGACCT............................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0 0
.........................................................................................................ACCACCTTCGCCACCCTA................................................................................................................................ 18 2 10 0.10 1 1 0 0 0 0 0
...............................................................................................................................................TTGTAACTTGGGAACGAAGTGAGATTTT................................................................................ 28 0 10 0.10 1 1 0 0 0 0 0
...............................................................................................................................................CTGTAACTTGGGAACGAAGTGAGAT................................................................................... 25 1 10 0.10 1 0 1 0 0 0 0
........................................................................CCTGATGTCTCTATAGACCTATGAGAG........................................................................................................................................................ 27 0 10 0.10 1 1 0 0 0 0 0
...............................................................................................................................................TTGTAACTTGGGAACGAAATGAGAT................................................................................... 25 1 10 0.10 1 0 1 0 0 0 0
.....................CTACTATAACGGTAGTAGATATTGAGT........................................................................................................................................................................................................... 27 0 10 0.10 1 0 1 0 0 0 0
..............................................GTTTTTTGCACCAACTTCGTTC....................................................................................................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0
.........................................................................CTGATGTCTCTATAGACCTATGAGAG........................................................................................................................................................ 26 0 10 0.10 1 0 1 0 0 0 0
..............................................GTTTTTTGCACCAACTTCGTTCAGG.................................................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0
..............................................................................................................GTTCGCCACCTTAGAGTTTCAAT...................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0
.............................................................................................................................................................................................GGGGGTTAGGTCTACAGCCCTCAT...................................... 24 0 11 0.09 1 1 0 0 0 0 0
..............................................................................................................................................................................................GGCGTTAGGTCTACAGCCCTCAT...................................... 23 1 11 0.09 1 0 1 0 0 0 0
.............................................................................................................CGTTCGCCAACTTAGAGTTTCAAT...................................................................................................................... 24 1 11 0.09 1 0 1 0 0 0 0
..................................................................................................................................................CAACTTGGGAACGAAGTGAGATTTT................................................................................ 25 1 11 0.09 1 0 1 0 0 0 0
.......................................................................................................................................................TGGGAACGAAGTGAGATTTT................................................................................ 20 0 11 0.09 1 0 0 1 0 0 0
...............................................................................................................................................................................TCCGTTACGTATGGGGGGGTTAGGTCT................................................. 27 1 11 0.09 1 0 0 1 0 0 0
..............................................................................................................GTTCGTCACCTTAGAGTTTCAATT..................................................................................................................... 24 1 11 0.09 1 0 1 0 0 0 0
...................................................................................................................................................AACTTGGGAACGAAGTGAGATTT................................................................................. 23 0 11 0.09 1 1 0 0 0 0 0
.........................TAGAAGGGTAGTAGCTATTGA............................................................................................................................................................................................................. 21 3 11 0.09 1 0 0 1 0 0 0
.............................................................................................................CGTTCGCCACCTTAGAGTTTCAATT..................................................................................................................... 25 0 11 0.09 1 0 1 0 0 0 0
....................................................................................................................................................................................................AGGTCTACAGCCCTCTTAGGT.................................. 21 3 11 0.09 1 0 0 0 0 1 0
........................................................................................................................................................GGGAACGAAGTGAGATTTT................................................................................ 19 0 11 0.09 1 0 1 0 0 0 0
...............................................................................................................................................................................................GGGTTAGGTCTACAGCCCT......................................... 19 0 11 0.09 1 1 0 0 0 0 0
..............................................................................................................GTTCGCCACCTTAGAGTTT.......................................................................................................................... 19 0 12 0.08 1 1 0 0 0 0 0
............................................................................................................................................................................................................TGCCCTCATTGGGATGTCGTTG......................... 22 1 12 0.08 1 0 1 0 0 0 0
.................................................TTTTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 23 0 12 0.08 1 1 0 0 0 0 0
.............................................................................................................CGTTCGCCACCTTAGAGTT........................................................................................................................... 19 0 12 0.08 1 1 0 0 0 0 0
...........................................................................................................................................................................TCCGACCGTTACGTATGGGGGGGTT....................................................... 25 0 12 0.08 1 1 0 0 0 0 0
..................................................TTTGCACCAACTTCGTTCATGT................................................................................................................................................................................... 22 0 12 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGGCGAGTCCACTT............ 24 1 13 0.08 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGGCTGTCTTTGGACGAGTCCACTT............ 25 2 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................CGATGTCGTTGGACGAGTCCAATT............ 24 2 13 0.08 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................GTTGGACGAGTCCACTTTATAGAACCGT. 28 0 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTTCC.......... 26 2 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCGCTT............ 25 1 13 0.08 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................CGGGATGTCGTTGGACGAGTCCACTT............ 26 1 13 0.08 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................TGTCGTTGGACGAGTCCGCTT............ 21 1 13 0.08 1 0 0 0 1 0 0
....................................................................................................................................................................................................................TTGGGATGTCGTTGGACGAGTCCACTT............ 27 0 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACTTTAA......... 28 1 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCTCGT............ 24 2 13 0.08 1 0 1 0 0 0 0
........................................................................................................................................................................................................................GATGTCGTTGGACGAGTCCACT............. 22 0 13 0.08 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACTTCGC......... 28 3 13 0.08 1 0 1 0 0 0 0
........................................................................................................................................................................................................................GATGTCGTTGGACGAGTCCAGTT............ 23 1 13 0.08 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................GGACGAGTCCACTTTATAGAACCGT. 25 0 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GGCTGTCGTTGGACGAGTCCACTT............ 24 1 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTC............ 24 1 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GGATGCCGTTGGACGAGTCCACTT............ 24 1 13 0.08 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGTATGTCGTTGGACGAGTCCACTT............ 25 1 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTTA........... 25 1 13 0.08 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCTCTT............ 25 1 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................TGTATGTCGTTGGACGAGTCCACTT............ 25 2 13 0.08 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................ATGTCGTTGGACGAGTCCACTTTAT......... 25 0 13 0.08 1 1 0 0 0 0 0
........................................................................................................................................................................................................................GATGTCGTTGGTCGAGTCCACTT............ 23 1 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTTATC......... 27 3 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTTGACGAGTCCACTTC........... 25 2 13 0.08 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................GTCGTTGGACGAGTCCACTTTATAGA...... 26 0 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTTCT.......... 26 2 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCAGT............. 23 1 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACCT............ 25 1 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTTGACGAGTCCACTT............ 25 1 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACTTTAT......... 28 0 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACCTT........... 26 1 13 0.08 1 0 1 0 0 0 0
........................................................................................................................................................................................................................GGATTCGTTGGACGAGTCCACTT............ 23 3 13 0.08 1 0 1 0 0 0 0
........................................................................................................................................................................................................................TTTGTCGTTGGACGAGTTCACTT............ 23 3 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................TGATGTCGTTGGACGAGTCCAATT............ 24 2 13 0.08 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................CGTCGTTGGACGAGTCCACTT............ 21 1 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTTGGACGAGTCCACTTTAT......... 27 0 13 0.08 1 0 1 0 0 0 0
............................................................................................................................................................................................................................TCGTTGGACGAGTCCACTT............ 19 0 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGTCCACTTG........... 26 1 13 0.08 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGAAGAGTCCACGT............ 25 2 13 0.08 1 0 1 0 0 0 0
........................................................................................................................................................................................................................GATGTCGTTGGACGAGTCCACTTTAT......... 26 0 13 0.08 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................CGTGATGTCGTTGGACGAGTCCACTT............ 26 2 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACGAGT.................. 19 0 13 0.08 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACAAGTCCACTT............ 25 1 14 0.07 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GGATGTCGTAGGACGGGTCCACTT............ 24 2 14 0.07 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGGATGTCGTTGGACCAGTCCACTT............ 25 1 14 0.07 1 1 0 0 0 0 0
.........................TAGAAGGGTAGTAGCTATTG.............................................................................................................................................................................................................. 20 3 15 0.07 1 0 0 1 0 0 0
............................................................................................................................AGATTCAATTGGGCTAGT............................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:8641709-8641959 + dmo_705 CCTCGAA--AGCTGT--------CATATGCTGATGATATTGCCATCATCTATAACTCAAAAAAC--GTGGTTGAAGCAAGTACAGGACTACAGAGATATCTGGATACTCTCGCTGATTGGTGCAAGCGGTGGAATCTCAAAGTTAACCCGCTAAAAACATTGAACCCTTGCTTCACTCTAAAAAGG-CTGGCAATGCATACCCCCCCAAT--CCA-------------GATGTCGGGAGTAACCCTACAGCAACCTGCTCAGGTGAAATATCTTGGCAT
droVir3 scaffold_13324:1419263-1419514 + G----AA--GGCTATTATAGCAACATATGCAGATGACATCGCAGTCATTTATAACTCCAAAAGA--TGCGTAGAAGCTAGCAATGGACTTCAGTGGTATCTGGATACTCTTGCAGCTCTGTGCAAACGGTGGAATTTGAAGGTTAACCCGTTAAAAACAATTAACCCTTGCTTCACCCTCAAAATG-CGGATG---CATATCCCTCCAAT--TCA-------------GCTTGAAGGAGTTACCCTGGAGCAGCCGCCACAAGCTAAGTATCTCGGCAT
droGri2 scaffold_14857:9016-9250 + G-------------------CTACATGCGCGGATGACACTGTGTTCGTTGCTAACTCCACC-AT--TGCTTGGAGAGCGCTGCGGTTACGCAGAGGTTCTTGGATGGCTTTAGTACTTGGGCCAAGCGGTGGAACATCTGCGTCAACGAGAGCAAGTCTCAGCACTGCATGTTTGCGCTCAGGAATGGTAACTG--TCTAACTGTTCGAC--TCA-------------ACAACAAGGTCATACC-----TCAGGAGAACCATGCTCGCTACCTGGGTAT
droWil2 scf2_1100000004521:8871491-8871749 - CCAGCAA--AGCTTTCCTTGCCACTTATGCGGACGATATCGCCCTTCTATACAGCTCAAAATGT--CGCTCTGAGGCAGCTTCTGGTATGCAGGAGTATCTCAACACGTTCTCAGCTTGGTGTAAGCGGTGGAACTTAAAAATCAACGCACAGAAGACTATGAATCCCTGCTACACACTAAAAACG-CTCAGAGACAACACACCGGCTAT--TCA-------------ACTAGAAGGCGTAACTCTCGAACAGCCCTCGCAAGCTAGATATCTTGGCAT
dp5 Unknown_group_108:9604-9863 - CCCGTAA--GGCTCT-------ACTTACGCGGACGATATAGCACTGCTCTACAGCTCTAAATGC--CGCCTTGAAGCAGCAGATGGACTCCAGGAGTACCTCCACTCTTTGGCAGCTTGGTGGAAGAGATGGAATCTAAAAGTCAACCCACTGAAGACCAGCAATCCATGCTTCACCCTGAAAGCG-CTCATAGACAACACCCCACCAAT--ATGAAGTATGAAGACAGTATGAA-----GACTTTGGACCAACCAGAGCAAGCAAAGTATCTCGGTAT
droPer2 scaffold_43:296995-297257 - CCCGTAA--GGCTCT----ACTACTTACGCGGACGATATAGCACTGCTCTACAGCTCTAAATGC--CGCCTTGAAGCAGCAGATGGACTCCAGGAGTACCTCCACTCTTTGGCAGCTTGGTGGAAGAGATGGAATCTAAAAGTCAACCCACTGAAGACCAGCAATCCATGCTTCACCCTGAAAGCG-CTCATAGACAACACCCCACCAAT--ATGAAGTATGAAGACAGTATGAA-----GACTTTGGACCAACCAGAGCAAGCAAAGTATCTCGGTAT
droAna3 scaffold_13335:3330904-3331162 + CCTCTAA--AGCACTTATTGCGACCTATGCAGATGACATTGCAGTCATTTACAACTACAGATGT--CACAGAGAAGCTTCCAATGGATTACAGGAGTACCTATTCACTCTTGCAGCTTGGTGCAAAAGATGGAACCTGAAGATTAATCCGCAGAAAACAACAAACGTCTGCTTTACACTGAAAAGG-CTCATAATTAATACCCCTCAAAT--CCA-------------ACTTGAGGGAGTTACCCTAGAACAGCAAAACGAAGCAAAATATCTTGGTAT
droBip1 scf7180000396145:2556-2814 + CCTCCAA--AGCTATTATTGCGACCTATGCAGATGACATTGCTGTCATCTACAACTCCAGTTGT--CGCCATGAAGCAGCTAATGGGCTGCAACTCTATCTCGAATCTCTTGCAGCTTGGTGCAAACGGTGGAATTTAAAGATTAATCCGTTGAAAACAACAAACACCTGCTTCACGCTGAAGCGG-AAAATAATGAACACGCCTCAAAT--CCA-------------TCTAGAGGGAGTCACTCTGGAGCAGCCATCACTAGCGAAATACCTAGGCAT
droKik1 scf7180000298953:633-875 + TTC--------------AGGCCATCTATGCTGATGACACCGCATTCCTTGTTAACTCCCCCTGT--CGAAACGAAGCTTCAAGGATCACCCAGGAATTTCTGGACTCATACGGCAAGTGGACCAACAGGTGGAATATTTCTATAAATAATAGAAAGTCGCAGCACTGCAACTTCACTCTTAATGGA-AAGATC------CTCCCTAGGGTTGATC-------------TCTTGATGACATCGCCATCCCACAAGCACCACAGGCGCAGTATTTAGGTCT
droFic1 scf7180000453323:189-447 + CTTCCAA--AGCTTTGATTGCTACATATGCAGATGACATTGCAGTCATCTACAATTCCAGATGT--CGGAGGGAAGCAGCAAATGGAATACAAGAATACCTTAAGGATCTTTCTGCTTGGTGTAAACGTTGGAATATGAGAATCAATCCGCAAAAAACTACGAACCCCTGCTTTACACTGAAGAGA-CTTGTATCTAACACCCCTGAAAT--CCA-------------GCTAGAGGGAGTCAGTTTGGAACAGCCGTCGCAAGCAAAATATCTTGGTAT
droEle1 scf7180000490741:601-838 - CTT-----------------CTACATTCGCAGACGATACCGCGATCTTAAGTCGGTCCAAATGC--CCAATTCAGGCAACAGCACTACTAGCTGATCATCTCGTGGTAGTGGAGAGGTGGTTATCAGATCGGCGTATAAAAATAAATGCGCAAAAGTGTAAACACATAACGTTTACTCTTAACAGA-CAAACG------TGTCCCCCGCT--AAC-------------TCTGAATGACACGCCACTTCCACAAGCTGACGATGTGACGTACCTTGGCGT
droRho1 scf7180000777187:3764-4016 + CGTCAAA--GGCATTAATAGCTACATACGGGGATGATATTGCGGTGCTCTACAGCTCAAAGGAT--CATGTAGAAGCTGGAAATGGTCTACAGATGTACCTGGACGCCCTGGCAAATTGGTGCAGGCGATGGAACTTAAAGGTGAATCCGCTGAAAACCGTCAACCCATGCCTCACATTGAGAAGT-CTTTTA------ACGCCTCCTAT--TCA-------------GATGAAAGGAGTAACCCTTGAGCAGCCGACCCACGCAAAATATCTGGGCAT
droBia1 scf7180000301697:577-815 + TCT--------------TGGCTACATATGCTGATGATACAGCCTTTATTT-CAACTCCATGTGT--CGAAATAAATCGACTCAAATCATTCAAAAATTTTTGATTTTGCATGGCGAATGGACGAATCGATGGAATATTTCGATACATGGTAATATGTCTCAGCACTGAAACTTCTCTCTTCGAAGT-AAAACT------CCCCCCAGAGT--GAA-------------ATTGCAGGACAGAGTCATACCGCAATCAGCCCAGACTCAGTAT-TTGGCCT
droTak1 scf7180000414216:5150-5391 + TTAAC-------------AGCTACCTATGCAGATGACACAGTATTTGTGGCGACAAGTGCTCTG--CGAAGAGAGGCGACAGATATGGTGCAGGATATGCTAAATGAGTTTGAGGCCTGGGCGTCGAGGTGGAACATCGCAGTTAATCCAGCCAAATCTCAGCATGCAACCTTTTCATTAAACAGG-CTGA------ACACTTATCGCCT--AAC-------------CTTAGACGGGACTCCAATAAAGCACTCGGACAAGGTTAAGTAGCTTGGACT
droEug1 scf7180000408026:2206-2466 - CCTCAAA--AACACTTATTGCGACATATGCAGATGACATTGCAGTCATCTACAACTCAAGTTCTCTGTGGCAGAACCAGATAAGGGTATACAGAATTACCTTACCACCATTGCAGCTTGGTGCAAACGGTAGAACCTAAAGATTAATCCGTCAAAAACAACGAACACCTGTTTTACACTAAAAACA-TTAATAATCAATACCAATGTAAT--CCA-------------GTTAGAGGGAGTTACTCTGGAGCAGCAGTCTCAAGCGAAATACCTTGGTAT
dm3 chr3LHet:1897351-1897609 - CGAACAG--GGCTCTTATTGCAACCTATGCAGATGACATCGCAGTTGTATATAACTCTAGGGAC--AGCAGAGAGGCAGCTAACGGACTGCAATAATATATTAATGCTCTGGCAGCCTGGTGTAAACGGTGGAACCTAAAAATAAACCCACTGAAAACAACAAATCCATGCTTCACATTAAAAACG-CTTGTCCAAAACACCCCTCCAAT--CCG-------------GCTAGAAGGAGTTACCCTGAATCAACCGCTGCAAGCAACATATCTAGGTAT
droSim2 node_82818:662-919 - CGAAAAG--GACTCTTATTGCAACATATGCAGATGACATCGCAGTTGTATATAACTCTAGGGAC--AGCAGAGAAGCAGCTAACGGACTACAAGAATATATAAATGCTCGGGCAGCCTGGTG-AAACGGTGGAACCTAAAAATAAACCCACTGAAAACAACAAATCCATGCTTCACATTAAAAACG-CTTATCCCGAACACCCCTCCAAT--CCG-------------GCTAGAAGGAGTTACCCTGAATCAGCCCCTGCAAGCAACATATCTAGGTAT
droSec2 scaffold_5283:1479-1739 - CCGAAAAAGAACTCTTATTGCAACCTATGCAGATGACATCGCAGTTGTATATAACTCTAGGGAC--AGCAGAGTAGCAGCTAACGGACTACAAGAATATATTAATGCTCTGACAGCCTGGTGTAAACGGTGGAACCTAAAAATAAACCCACTGAAAACAACAAACCCGTGCTTCACGTTAAAAACG-CTTATCCCGAACACCCCTCCAAT--TCG-------------TCTAGAAGGAGTTACCCTGAATCAGCCCCTGCAAGCAACATATCTAGGTAT
droYak3 v2_chrUn_787:25065-25323 + CCTACAA--GGCTCTTATGGCAACCTATGCAGATGACATCGCAGTGGTGTATAACTCTGGGGAC--AGCGGAGAGGCAGCGAAAGGACTGCAAGAATACATTAATGCTCTAGCAGCCTGGTGTAAACGGTGGAATCTAAAAATAAATGCAACGAAAACCACAAATCTATGTTTCACATTGAAAACG-CTCATCAAAAAAACACCCCCACT--CCA-------------GCTAGAAGGAGTTACACTAGACCAGCCGCTGCAAGCAACATATCTAGGTAT
droEre2 scaffold_4732:38051-38309 + CCACGAA--GGCCCTACTCGCCACTTACGCTGACGATATCGCATTGTTATACAGCTCCAGTTCT--TGCACTGAGGCAGCACGTGGCCTCCAAAAGTATCTCAATACTTTGGCTGCATGGTGCAAAAGATGGAACTTAAAGGTGAATCCACATAAGACCATCAATCCTTGCTTCACCTTGAAGACT-CTCATTAGGCGCACACCACCCAT--ACA-------------ATTTGATGGCGTAACCCTAGAACAACCTCTGCAGGCTAAATACCTCGGGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCTCGAA--AGCTGT--------CATATGCTGATGATATTGCCATCATCTATAACTCAAAAAAC--GTGGTTGAAGCAAGTACAGGACTACAGAGATATCTGGATACTCTCGCTGATTGGTGCAAGCGGTGGAATCTCAAAGTTAACCCGCTAAAAACATTGAACCCTTGCTTCACTCTAAAAAGG-CTGGCAATGCATACCCCCCCAAT--CCA-------------GATGTCGGGAGTAACCCTACAGCAACCTGCTCAGGTGAAATATCTTGGCATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................AGCAAGTACAGGACTACAGAGATATC...................................................................................................................................................................................26112.00222000020
..........................................................................AGCAAGTACAGGACTACAGAGATA.....................................................................................................................................................................................24111.55171700000
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATGCA.................................................................................24131.08141400000
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATGC..................................................................................23131.00131300000
..........................................................................AGCAAGTACAGGACTACAGAGA.......................................................................................................................................................................................22110.738800000
...................................................................................................................................GAATCTCAAAGTTAACCCGCTAAAAACA........................................................................................................................2880.635500000
..........................................................................AGCAAGTACAGGACTACAGAGAT......................................................................................................................................................................................23110.556600000
.CTCGAA--AGCTGT--------CATATGCTGAT.....................................................................................................................................................................................................................................................2320.501100000
......A--AGCTGT--------CATATGCTGATGA...................................................................................................................................................................................................................................................2020.501100000
.....AA--AGCTGT--------CATATGCTGATGATATTGCC............................................................................................................................................................................................................................................2820.501100000
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATG...................................................................................22130.385400010
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATGCATACC.............................................................................28120.334400000
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATGCAT................................................................................25130.314400000
........................................................................................................................................................................................................................................TCGGGAGTAACCCTACAGCAACCTGC.....................26110.273100020
...........................................................................GCAAGTACAGGACTACAGAGATATCT..................................................................................................................................................................................26110.273300000
...........................................................................GCAAGTACAGGACTACAGAGATATC...................................................................................................................................................................................25110.273300000
.................................................................................................................................................................................................................T--CCA-------------GATGTCGGGAGTAACCCTACAGC............................27110.273000030
..........................................................................................................................................................................CTTCACTCTAAAAAGG-CTGGCA......................................................................................22120.253200010
............................................TCATCTATAACTCAAAAAAC--GTGG.................................................................................................................................................................................................................24110.182200000
............................................TCATCTATAACTCAAAAAAC--GTG..................................................................................................................................................................................................................23110.182200000
..........................................................................AGCAAGTACAGGACTACAGAGATAT....................................................................................................................................................................................25110.182200000
..................................................................................................TCTGGATACTCTCGCTGATTGGTG.............................................................................................................................................................2460.171100000
...........................................................................................................................................................................TTCACTCTAAAAAGG-CTGGCAATGC..................................................................................25120.172100010
..............................................................................................................................................................................ACTCTAAAAAGG-CTGGCAATGC..................................................................................22130.152200000
..............................................................................................................................................................................ACTCTAAAAAGG-CTGGCAATGCA.................................................................................23130.152200000
........................................................................................................TACTCTCGCTGATTGGTGCAA..........................................................................................................................................................2180.131100000
........................................................................................................TACTCTCGCTGATTGGTGCAAGC........................................................................................................................................................2380.131100000
.................................................................................................................................................ACCCGCTAAAAACATTGAACCCTTG.............................................................................................................2590.111100000
.....................................................................................................................TGGTGCAAGCGGTGGAAT................................................................................................................................................1890.111100000
.......................................................................................................................................CTCAAAGTTAACCCGCTAAAAACA........................................................................................................................24100.101100000
.........................................CCATCATCTATAACTCAAAAAAC--GTGG.................................................................................................................................................................................................................27100.101100000
............................................TCATCTATAACTCAAAAAAC--GTGGTT...............................................................................................................................................................................................................26100.101100000
........................................................................................................................................TCAAAGTTAACCCGCTAAAAACATTG.....................................................................................................................26100.101100000
.........................................CCATCATCTATAACTCAAAAAAC--GTG..................................................................................................................................................................................................................26100.101100000
..............................................................................AGTACAGGACTACAGAGATATCTGGA...............................................................................................................................................................................26100.101100000
............................................TCATCTATAACTCAAAAAAC--GTGGT................................................................................................................................................................................................................25110.091100000
......................................................CTCAAAAAAC--GTGGTTGA.............................................................................................................................................................................................................18110.091100000
...........................................ATCATCTATAACTCAAAAAAC--GTGG.................................................................................................................................................................................................................25110.091100000
...........................................................................GCAAGTACAGGACTACAGA.........................................................................................................................................................................................19110.091100000
...............................................................................................................................................................TTGAACCCTTGCTTCACTCTAAAAAG..............................................................................................26110.091100000
...........................................................................GCAAGTACAGGACTACAGAGAT......................................................................................................................................................................................22110.091100000
............................................................................CAAGTACAGGACTACAGAGATAT....................................................................................................................................................................................23110.091100000
..........................................................................AGCAAGTACAGGACTACAGAGATAC....................................................................................................................................................................................25110.091100000
...........................................................................GCAAGTACAGGACTACAGAGA.......................................................................................................................................................................................21110.091100000
..........................................................................AGCAAGTACAGGACTACAGAGATATA...................................................................................................................................................................................26110.091100000
..........................................................................AGCAAGTACAGGACTACAGAGATT.....................................................................................................................................................................................24110.091100000
...........................................ATCATCTATAACTCAAAAAAC--GTGGT................................................................................................................................................................................................................26110.091100000
...................................................................................................................................................................ACCCTTGCTTCACTCTAAAAAGG-CT..........................................................................................25110.091100000
.........................................................................................................................................................................GCTTCACTCTAAAAAGG-CTGG........................................................................................21110.091100000
..........................................................................................................................................................................CTTCACTCTAAAAAGG-CTGGCAATGCAT................................................................................28120.081100000
..........................................................................................................................................................................CTTCACTCTAAAAAGG-CTGGC.......................................................................................21120.081100000
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATGCATACCC............................................................................29120.081000010
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATGCATAC..............................................................................27120.081100000
..........................................................................................................................................................................CTTCACTCTAAAAAGG-CTGG........................................................................................20120.081100000
.................................................................................................................................................................................................................................................................CTCAGGTGAAATATCTTGGCAT22120.081100000
..........................................................................................................................................................................CTTCACTCTAAAAAGG-CTGGCAATGC..................................................................................26120.081100000
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATGCATA...............................................................................26120.081100000
............................................................................................................................................................................TCACTCTAAAAAGG-CTGGCAATG...................................................................................23130.081100000
.............................................................................................................................................................................CACTCTAAAAAGG-CTGGCAATGCATT...............................................................................26130.081100000
.................................................................................................................................................................................CTAAAAAGG-CTGGCAATGCAT................................................................................21150.071100000
droVir3
G----AA--GGCTATTATAGCAACATATGCAGATGACATCGCAGTCATTTATAACTCCAAAAGA--TGCGTAGAAGCTAGCAATGGACTTCAGTGGTATCTGGATACTCTTGCAGCTCTGTGCAAACGGTGGAATTTGAAGGTTAACCCGTTAAAAACAATTAACCCTTGCTTCACCCTCAAAATG-CGGATG---CATATCCCTCCAAT--TCA-------------GCTTGAAGGAGTTACCCTGGAGCAGCCGCCACAAGCTAAGTATCTCGGCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGG...............................23555.2027600001290000005128000000000000000000080000103200000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTG................................22527.8013900006310000010100000000000000000003000068200000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGAG.............................2554.20210000610000000100000000000000000001000012000000000000000000000000
........................................................................................................TACTCTTGCAGCTCTGTGCAAACGGT.....................................................................................................................................................2614.004000000000000000000000000012000010000000000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGA..............................2453.4017000080000000000000000000000000000000009000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGAGC............................2652.8014000090000000000000000000000000000000005000000000000000000000000
............................................TCATTTATAACTCCAAAAGA--TGCGTAG..............................................................................................................................................................................................................2712.002000020000000000000000000000000000000000000000000000000000000000
..................................................................................ATGGACTTCAGTGGTATCTGGA...............................................................................................................................................................................2212.002000010000000000000000000000000000000001000000000000000000000000
..................................................................................ATGGACTTCAGTGGTATCTGGAT..............................................................................................................................................................................2312.002000020000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................T--TCA-------------GCTTGAAGGAGTTACCCTGG...............................2451.809000050000000000000000000000000000000004000000000000000000000000
.......................................................................................................................................TTGAAGGTTAACCCGTTA..............................................................................................................................1831.675000010000000000000000000000000000000004000000000000000000000000
........................................................................................................TACTCTTGCAGCTCTGTGCAAACGGTGG...................................................................................................................................................2811.001000000000000000000000000100000000000000000000000000000000000000
.................................................................................................ATCTGGATACTCTTGCAGCTC.................................................................................................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
.........................................CAGTCATTTATAACTCCAAAAGA--TGCG.................................................................................................................................................................................................................2711.001000010000000000000000000000000000000000000000000000000000000000
.........................................CAGTCATTTATAACTCCAAAAGA--TGC..................................................................................................................................................................................................................2611.001000000000000000000000000000000000000001000000000000000000000000
........................................................................................................TACTCTTGCAGCTCTGTGCAAACGG......................................................................................................................................................2511.001000000000000000000000000100000000000000000000000000000000000000
...................................................TAACTCCAAAAGA--TGCGTAGAAGCT.........................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................CAAAAGA--TGCGTAGAAGCTAGCAATG..................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.........................................................................AAGCTAGCAATGGACTTCAGTGG.......................................................................................................................................................................................2311.001000010000000000000000000000000000000000000000000000000000000000
...............................................................A--TGCGTAGAAGCTAGCAATGG.................................................................................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
..................................................................................ATGGACTTCAGTGGTATCTGG................................................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCC..................................2050.804000010000000000000000000000000000200001000000000000000000000000
.................................................................................................................................................................................................................T--TCA-------------GCTTGAAGGAGTTACCCTG................................2350.804000020000000000000000000000000000000002000000000000000000000000
.......................................................................................................................................TTGAAGGTTAACCCGTTAAA............................................................................................................................2030.672000010000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGT..............................2450.603000000000000000000000000000000000000003000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGAGCAG..........................2850.603000020000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACC...................................1950.603000020000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGAGT............................2650.603000010000000000000000000000000000000002000000000000000000000000
.....................................................................................................................................................................................................................................CTTGAAGGAGTTACCCTGG...............................1970.574000000000000000000000000000000000000004000000000000000000000000
.........................................................................................................................................................................GCTTCACCCTCAAAATG-CGGATG---C..................................................................................2420.501000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................CACCCTCAAAATG-CGGATG---CATA...............................................................................2320.501000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................GCTTCACCCTCAAAATG-CGGATG---CA.................................................................................2520.501000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................AAAATG-CGGATG---CATATCC............................................................................1920.501000000000000000001000000000000000000000000000000000000000000000
.......................CATATGCAGATGACATCGCAGTC.........................................................................................................................................................................................................................................2360.503000020100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GCTTGAAGGAGTTACCCTGG...............................2070.433000000000000020000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCA.................................2150.402000010000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGT...............................2350.402000010000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCT.................................2150.402000000000000020000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTT................................2250.402000010000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................AAGGAGTTACCCTGGAGCAGC.........................2160.332000000000000000001000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGAAGGAGTTACCCTGGAGCA...........................2170.292000000000000000000000000010000000000001000000000000000000000000
......................................................................................................................................................................................................................A-------------GCTTGAAGGAGTTACCCTGG...............................2170.292000010000000000000000000000000000000000100000000000000000000000
....................................................................CGTAGAAGCTAGCAATGGACT..............................................................................................................................................................................................2140.251000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGATA.............................2550.201000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGA...............................2350.201000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGTA.............................2550.201000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGAA.............................2550.201000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................TCA-------------GCTTGAAGGAGTTACCCTGGAGCC...........................2750.201000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................T--TCA-------------GCTTGAAGGAGTTACCCTGGAGC............................2750.201000000000000000000000000000000000000001000000000000000000000000
.......................CATATGCAGATGACATCGCA............................................................................................................................................................................................................................................2060.171000010000000000000000000000000000000000000000000000000000000000
.......................CATATGCAGATGACATCGCAGTCG........................................................................................................................................................................................................................................2460.171000000000000000000000000000000000000001000000000000000000000000
.......................CATATGCAGATGACATCGC.............................................................................................................................................................................................................................................1960.171000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................CA-------------GCTTGAAGGAGTTACCCTG................................2170.141000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................A-------------GCTTGAAGGAGTTACCCTG................................2070.141000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................CTTGAAGGAGTTACCCTGGAG.............................2170.141000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................GCTTGAAGGAGTTACCCTGGAGC............................2370.141000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................A-------------GCTTGAAGGAGTTACCCTGGAGC............................2470.141000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................CTGGAGCAGCCGCCACAAGC...............2080.131000000001000000000000000000000000000000000000000000000000000000
droGri2
G-------------------CTACATGCGCGGATGACACTGTGTTCGTTGCTAACTCCACC-AT--TGCTTGGAGAGCGCTGCGGTTACGCAGAGGTTCTTGGATGGCTTTAGTACTTGGGCCAAGCGGTGGAACATCTGCGTCAACGAGAGCAAGTCTCAGCACTGCATGTTTGCGCTCAGGAATGGTAACTG--TCTAACTGTTCGAC--TCA-------------ACAACAAGGTCATACC-----TCAGGAGAACCATGCTCGCTACCTGGGTATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CCAGCAA--AGCTTTCCTTGCCACTTATGCGGACGATATCGCCCTTCTATACAGCTCAAAATGT--CGCTCTGAGGCAGCTTCTGGTATGCAGGAGTATCTCAACACGTTCTCAGCTTGGTGTAAGCGGTGGAACTTAAAAATCAACGCACAGAAGACTATGAATCCCTGCTACACACTAAAAACG-CTCAGAGACAACACACCGGCTAT--TCA-------------ACTAGAAGGCGTAACTCTCGAACAGCCCTCGCAAGCTAGATATCTTGGCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
CCCGTAA--GGCTCT-------ACTTACGCGGACGATATAGCACTGCTCTACAGCTCTAAATGC--CGCCTTGAAGCAGCAGATGGACTCCAGGAGTACCTCCACTCTTTGGCAGCTTGGTGGAAGAGATGGAATCTAAAAGTCAACCCACTGAAGACCAGCAATCCATGCTTCACCCTGAAAGCG-CTCATAGACAACACCCCACCAAT--ATGAAGTATGAAGACAGTATGAA-----GACTTTGGACCAACCAGAGCAAGCAAAGTATCTCGGTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................CGATATAGCACTGCTCTACAGCTC..............................................................................................................................................................................................................................241110.73118011040100300
.................................CGATATAGCACTGCTCTACAGC................................................................................................................................................................................................................................22136.628607090400300
..........................................................................................................................................................................................................................TATGAAGACAGTATGAA-----GACTTTGGAC.............................2716.0060100000140
..........................................................................................................................................................................................................................TATGAAGACAGTATGAA-----GACTTTGGA..............................2614.0040000000040
.................................CGATATAGCACTGCTCTACAGCT...............................................................................................................................................................................................................................23123.584313610300200
....................................................................................................................................................................TCCATGCTTCACCCTGAAAGCG-CTCA........................................................................................2643.001201100000010
.................................CGATATAGCACTGCTCTACAG.................................................................................................................................................................................................................................21132.623403210100000
........................................................................................................CTCTTTGGCAGCTTGGTGGAAGA........................................................................................................................................................2312.0020100001000
.............................................................TGC--CGCCTTGAAGCAGCAGATGGAC...............................................................................................................................................................................................2531.6751300000010
.....................................................................................................................................................................................................................................................TGGACCAACCAGAGCAAGCAAAGTATC.......2741.5060000000150
.................................................................................................................................TGGAATCTAAAAGTCAACCCACTGAAG...........................................................................................................................2721.5030300000000
....................................................................................................................................................................TCCATGCTTCACCCTGAAAGCG-CTC.........................................................................................2541.5060600000000
.....................................................................................................................................................................CCATGCTTCACCCTGAAAGCG-CTC.........................................................................................2451.4070700000000
.................................CGATATAGCACTGCTCTACAGCTCT.............................................................................................................................................................................................................................2531.3340400000000
.......................................................................TGAAGCAGCAGATGGACTCCAGGA........................................................................................................................................................................................2431.3340000000040
....................................................................................................................................................................TCCATGCTTCACCCTGAAAGCG-C...........................................................................................2341.2550410000000
.....................................................................................................................................................................CCATGCTTCACCCTGAAAGCG-C...........................................................................................2251.2060600000000
........................................................................................................................................TAAAAGTCAACCCACTGAAGACCAGCA....................................................................................................................2711.0010100000000
.........................................................................................................TCTTTGGCAGCTTGGTGGAAGAGATG....................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................TATGAAGACAGTATGAA-----GACTTTGG...............................2511.0010000000010
.....................................................................................................................TGGTGGAAGAGATGGAATCTAAAAGT........................................................................................................................................2611.0010000001000
............................................................................................................................................................................................................................TGAAGACAGTATGAA-----GACTTTGGAC.............................2511.0010000000010
.............................................................................................................TGGCAGCTTGGTGGAAGAGA......................................................................................................................................................2011.0010000001000
....TAA--GGCTCT-------ACTTACGCGG.......................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................TCCATGCTTCACCCTGAAAGCG-CTCATA......................................................................................2841.0040400000000
.............................................................TGC--CGCCTTGAAGCAGCAGATGGACT..............................................................................................................................................................................................2631.0030200000010
..................................GATATAGCACTGCTCTACAGCTC..............................................................................................................................................................................................................................23111.001101100000000
.....................................................................................................................................................................................................................................TATGAA-----GACTTTGGACCAACCAG......................2311.0010000000100
........................................................................................................................................................................................CG-CTCATAGACAACACCCCACCAA......................................................................2411.0010100000000
.......................................................................................................................................................................................GCG-CTCATAGACAACACCCCACC........................................................................2311.0010100000000
....................................................................................................................................................................................................................................................TTGGACCAACCAGAGCAAGCAAAG...........2441.0040000000220
....................................................................................................................................................................TCCATGCTTCACCCTGAAAGCG-CT..........................................................................................2440.7530300000000
.................................................................................................................................TGGAATCTAAAAGTCAACCCACT...............................................................................................................................2330.6720200000000
.......................................................................TGAAGCAGCAGATGGACTCCAGGAG.......................................................................................................................................................................................2530.6720000000110
.................................................................................................................................TGGAATCTAAAAGTCAACCCACTG..............................................................................................................................2430.6720100000100
....................................................................................................................................................................................................................................................TTGGACCAACCAGAGCAAGCA..............2160.6740000000400
.................................................................................................................................TGGAATCTAAAAGTCAACCC..................................................................................................................................2030.6720200000000
.....................................................................................................................................................................CCATGCTTCACCCTGAAAGCG-CTCA........................................................................................2550.6030300000000
................................................CTACAGCTCTAAATGC--CGCCTTGAAGCA.........................................................................................................................................................................................................2820.5010010000000
..................................................................................................................................GGAATCTAAAAGTCAACCCACTGAAG...........................................................................................................................2620.5010100000000
.................................................................................................................................TGGAATCTAAAAGTCAACCCACTGAAGA..........................................................................................................................2820.5010100000000
....................................................................................................................................................................TCCATGCTTCACCCTGAAAGCG-CTCAT.......................................................................................2740.5020200000000
..................................GATATAGCACTGCTCTACAGC................................................................................................................................................................................................................................21130.3850400100000
......................................................................TTGAAGCAGCAGATGGACTCCAGG.........................................................................................................................................................................................2430.3310000000010
........................................................................GAAGCAGCAGATGGACTCCAGGAG.......................................................................................................................................................................................2430.3310100000000
.........................................................................AAGCAGCAGATGGACTCCAGG.........................................................................................................................................................................................2130.3310100000000
..................................GATATAGCACTGCTCTACAGCTCT.............................................................................................................................................................................................................................2430.3310100000000
.................................CGATATAGCACTGCTCTACAGCTA..............................................................................................................................................................................................................................24120.3340210100000
....................................................................................................TCCACTCTTTGGCAGCTTG................................................................................................................................................................1930.3310100000000
.......................................................................TGAAGCAGCAGATGGACTCCAGG.........................................................................................................................................................................................2330.3310100000000
.....................................................................................................................................................................CCATGCTTCACCCTGAAAGCG-............................................................................................2160.3320200000000
.......................................................................TGAAGCAGCAGATGGACTCCA...........................................................................................................................................................................................2130.3310000000100
.................................................................................................ACCTCCACTCTTTGGCAGCTTGG...............................................................................................................................................................2330.3310100000000
..........................................................................................CAGGAGTACCTCCACTCTTTGGCA.....................................................................................................................................................................2430.3310100000000
................................................................................................TACCTCCACTCTTTGGCAGCTTGG...............................................................................................................................................................2430.3310100000000
.................................................................................................................................TGGAATCTAAAAGTCAACCCACTGA.............................................................................................................................2530.3310000000010
................................................................................................TACCTCCACTCTTTGGCAGC...................................................................................................................................................................2030.3310100000000
.................................CGATATAGCACTGCTCTACA..................................................................................................................................................................................................................................20130.3140400000000
....................................................................................................................................................................TCCATGCTTCACCCTGAAAG...............................................................................................2070.2920200000000
.................................................................................................................................................................CAATCCATGCTTCACCCTGAAAGCG-CT..........................................................................................2740.2510100000000
.....................................................................................................................................................................................................................................................TGGACCAACCAGAGCAAGCAAAG...........2340.2510000000100
....................................................................................................................................................................TCCATGCTTCACCCTGAAAGCG-CTA.........................................................................................2540.2510100000000
....................................................................................................................................................................................................................................................TTGGACCAACCAGAGCAAGCAAAGTATC.......2840.2510000000010
..................................GATATAGCACTGCTCTACAGCT...............................................................................................................................................................................................................................22120.2530300000000
........................................................................................................CTCTTTGGCAGCTTGGTGA............................................................................................................................................................1950.2010000100000
.................................................................................................................................................................CAATCCATGCTTCACCCTGAAAGCG-............................................................................................2550.2010100000000
.....................................................................................................................................................................CCATGCTTCACCCTGAAAGCG-CT..........................................................................................2350.2010100000000
.....................................................................................................................................................................CCATGCTTCACCCTGAAAGCG-CTA.........................................................................................2450.2010100000000
................................ACGATATAGCACTGCTCTACAGCTC..............................................................................................................................................................................................................................25110.1820200000000
....................................................................................................................................................................................................................................................TTGGACCAACCAGAGCAAGC...............2060.1710000000100
.................................CGATATAGCACTGCTCTACAGCA...............................................................................................................................................................................................................................23130.1520200000000
.................................CGATATAGCACTGCTCTAC...................................................................................................................................................................................................................................19130.1520200000000
...............................GACGATATAGCACTGCTCTAC...................................................................................................................................................................................................................................21130.1520200000000
..................................GATATAGCACTGCTCTACAG.................................................................................................................................................................................................................................20130.1520200000000
........................................................................................................................................TAAAAGTCAACCCACTGAAGACCA.......................................................................................................................2470.1410000001000
........................................................................................................................................................................TGCTTCACCCTGAAAGCG-CTCATAGAC...................................................................................2770.1410100000000
..........................................................................................................................................................................CTTCACCCTGAAAGCG-CTCATAGA....................................................................................2470.1410100000000
.......................................................................................................................................................................ATGCTTCACCCTGAAAGCG-............................................................................................1970.1410100000000
....................................................................................................................................................................TCCATGCTTCACCCTGAAAAA..............................................................................................2170.1410100000000
.........................................................................................................................................AAAAGTCAACCCACTGAAGA..........................................................................................................................2070.1410000000100
.............................................................................................................................................................................CACCCTGAAAGCG-CTCATAGAC...................................................................................2270.1410010000000
...........................................................................................................................................................................TTCACCCTGAAAGCG-CTCATAGA....................................................................................2370.1410000000100
........................................................................................................................................................................TGCTTCACCCTGAAAGCG-CTCATAG.....................................................................................2570.1410100000000
....................................................................................................................................................................TCCATGCTTCACCCTGAAAGC..............................................................................................2170.1410100000000
..........................................................................................................................................AAAGTCAACCCACTGAAGACC........................................................................................................................2170.1410100000000
........................................................................................................................................................................TGCTTCACCCTGAAAGCG-CTCATAGA....................................................................................2670.1410100000000
........................................................................................................................................................................TGCTTCACCCTGAAAGCG-CTCA........................................................................................2270.1410100000000
..........................................................................................................................................AAAGTCAACCCACTGAAGAC.........................................................................................................................2070.1410100000000
.....................................................................................................................................................................CCATGCTTCACCCTGAAAGC..............................................................................................2080.1310100000000
...................................ATATAGCACTGCTCTACAGCTC..............................................................................................................................................................................................................................22110.0910100000000
....................................TATAGCACTGCTCTACAGCTC..............................................................................................................................................................................................................................21110.0910100000000
..................................GATATAGCACTGCTCTACAGCTAA.............................................................................................................................................................................................................................24120.0810100000000
....................................TATAGCACTGCTCTACAGCT...............................................................................................................................................................................................................................20120.0810100000000
.............................CGGACGATATAGCACTGCTCTACAGC................................................................................................................................................................................................................................26120.0810000000100
.................................CGATATAGCACTGCTCTACAAAA...............................................................................................................................................................................................................................23130.0810100000000
.................................CGATATAGCACTGCTCTACAA.................................................................................................................................................................................................................................21130.0810100000000
..................................GATATAGCACTGCTCTACA..................................................................................................................................................................................................................................19130.0810100000000
...................................ATATAGCACTGCTCTACAGC................................................................................................................................................................................................................................20130.0810100000000
.....................................ATAGCACTGCTCTACAGC................................................................................................................................................................................................................................18130.0810100000000
.................................CGATATAGCACTGCTCTG....................................................................................................................................................................................................................................18140.0710100000000
droPer2
CCCGTAA--GGCTCT----ACTACTTACGCGGACGATATAGCACTGCTCTACAGCTCTAAATGC--CGCCTTGAAGCAGCAGATGGACTCCAGGAGTACCTCCACTCTTTGGCAGCTTGGTGGAAGAGATGGAATCTAAAAGTCAACCCACTGAAGACCAGCAATCCATGCTTCACCCTGAAAGCG-CTCATAGACAACACCCCACCAAT--ATGAAGTATGAAGACAGTATGAA-----GACTTTGGACCAACCAGAGCAAGCAAAGTATCTCGGTATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................TAGCACTGCTCTACAGCTCTAAATGC--.....................................................................................................................................................................................................................2653.00150150000
.......................................................................................................................................................TGAAGACCAGCAATCCATGCTTCACCC.....................................................................................................2741.506060000
..........................................................................................................................................................................................................................TATGAAGACAGTATGAA-----GACTTTGGAC.............................2721.002020000
......................................TAGCACTGCTCTACAGCTCTAAA..........................................................................................................................................................................................................................2350.603030000
......................................TAGCACTGCTCTACAGCTCTAAATGC--CGC..................................................................................................................................................................................................................2950.603030000
............................................................................................................................................................................................TCATAGACAACACCCCACCAAT--ATGAAG.............................................................2820.501010000
.......................................................................TGAAGCAGCAGATGGACTCCAGG.........................................................................................................................................................................................2320.501010000
......................................................................................................................................................................................................................................ATGAA-----GACTTTGGACCAAC.........................1920.501100000
..................................................................................................................GCTTGGTGGAAGAGATGGAAT................................................................................................................................................2120.501000001
........................................................................................................................................................GAAGACCAGCAATCCATGCTTCACC......................................................................................................2540.502020000
..............................................................................................................................................................................................ATAGACAACACCCCACCAAT--AT.................................................................2220.501010000
...............................GACGATATAGCACTGCTCTACAGCTC..............................................................................................................................................................................................................................26120.425050000
.............................................................TGC--CGCCTTGAAGCAGCAGATGGAC...............................................................................................................................................................................................2530.331010000
..............................GGACGATATAGCACTGCTCTACAGCTCT.............................................................................................................................................................................................................................2840.251100000
.......................................................................................................................................................TGAAGACCAGCAATCCATGCTTCACC......................................................................................................2640.251010000
........................................................................................................................................................GAAGACCAGCAATCCATGCTTCACCC.....................................................................................................2640.251010000
......................................TAGCACTGCTCTACAGCTCTAATGC........................................................................................................................................................................................................................2550.201010000
......................................TAGCACTGCTCTACAGCTCTAAATGT--.....................................................................................................................................................................................................................2650.201010000
......................................TAGCACTGCTCTACAGCTCTAAATGC--CG...................................................................................................................................................................................................................2850.201010000
......................................TAGCACTGCTCTACAGCTCTAAATGC--C....................................................................................................................................................................................................................2750.201010000
......................................TAGCACTGCTCTACAGCTCTAAATG........................................................................................................................................................................................................................2550.201010000
.................................CGATATAGCACTGCTCTACAGCTC..............................................................................................................................................................................................................................24120.172020000
.........................TACGCGGACGATATAGCACTGCTCTACT..................................................................................................................................................................................................................................28120.081010000
..............................GGACGATATAGCACTGCTCTACAGCTC..............................................................................................................................................................................................................................27120.081010000
......................................TAGCACTGCTCTACAGCTCTATGC.........................................................................................................................................................................................................................24120.081010000
.................................CGATATAGCACTGCTCTACAGCT...............................................................................................................................................................................................................................23120.081010000
......................................TAGCACTGCTCTACAGCTA..............................................................................................................................................................................................................................19130.081010000
..........................................................................................................................................................................................................................................................CAACCAGAGCAAGCAAAGTATCT......23160.061010000
.............................................................................................................................................................................................................................................................CCAGAGCAAGCAAAGTATCTCGG...23170.061010000
........................................................................................................................................................................TGCTTCACCCTGAAAGCG-CTCATAGAC...................................................................................27190.051010000
...................................................................................................................................................................................................................................................................CAAGCAAAGTATCTCGGT..18190.051010000
............................................................................................................................................................................TCACCCTGAAAGCG-CTCATAG.....................................................................................21200.051010000
droAna3
CCTCTAA--AGCACTTATTGCGACCTATGCAGATGACATTGCAGTCATTTACAACTACAGATGT--CACAGAGAAGCTTCCAATGGATTACAGGAGTACCTATTCACTCTTGCAGCTTGGTGCAAAAGATGGAACCTGAAGATTAATCCGCAGAAAACAACAAACGTCTGCTTTACACTGAAAAGG-CTCATAATTAATACCCCTCAAAT--CCA-------------ACTTGAGGGAGTTACCCTAGAACAGCAAAACGAAGCAAAATATCTTGGTATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................TACCTATTCACTCTTGCAGCTTGGTGC............................................................................................................................................................2760.503120000
................................................................................................TACCTATTCACTCTTGCAGCTTGG...............................................................................................................................................................2460.503201000
.........................................................................................................................GCAAAAGATGGAACCTGAAGATT.......................................................................................................................................2320.501100000
.................................................TACAACTACAGATGT--CACAGAGAAGC..........................................................................................................................................................................................................2690.444022000
............................................................................................................................................................................TTACACTGAAAAGG-CTCATAA.....................................................................................2130.331000010
..................................................................................ATGGATTACAGGAGTACCTATTCA.............................................................................................................................................................................2430.331000010
................................................................................CAATGGATTACAGGAGTACCTATTCAC............................................................................................................................................................................2730.331010000
...............................................................................................................................................................................CACTGAAAAGG-CTCATAATTAATACCCCT..........................................................................2930.331010000
...................................................................................TGGATTACAGGAGTACCTATTCACT...........................................................................................................................................................................2530.331010000
............................................................................................................................................................................TTACACTGAAAAGG-CTCATAATTAATACC.............................................................................2930.331010000
....................................................................................................................TTGGTGCAAAAGATGGAACCTGAAGAT........................................................................................................................................2770.292011000
............................................................................................................................................................................................................TCAAAT--CCA-------------ACTTGAGGGAGTTACC...................................2540.251010000
............................................................................................................................................................................................................TCAAAT--CCA-------------ACTTGAGGGAGTTACCCTAG...............................2940.251010000
...................................................CAACTACAGATGT--CACAGAGAAGC..........................................................................................................................................................................................................2490.222101000
.................................................TACAACTACAGATGT--CACAGAGAAGCT.........................................................................................................................................................................................................2790.222110000
.......................................................TACAGATGT--CACAGAGAAGCTTCC......................................................................................................................................................................................................2490.222001010
..............................................................................................................TGCAGCTTGGTGCAAAAGATGGA..................................................................................................................................................23100.202011000
........................................................................................................................................................................................................................................................AACAGCAAAACGAAGCAAAATAT........2350.201010000
............................................................................................................................................................................................TCATAATTAATACCCCTCAAAT--CCA-------------AC.................................................27100.202020000
................................................................................................TACCTATTCACTCTTGCAGCTTGGTGCA...........................................................................................................................................................2860.171100000
............................................................ATGT--CACAGAGAAGCTTCCAATGG.................................................................................................................................................................................................2460.171100000
............................................................................................................................................................................................................................................................GCAAAACGAAGCAAAATATCTTGG...2460.171100000
............................................................ATGT--CACAGAGAAGCTTCCAATGGA................................................................................................................................................................................................2560.171010000
.................TTGCGACCTATGCAGATGACATTGCAGT..........................................................................................................................................................................................................................................2860.171000010
...........................................................................................................................................................................................................................................................AGCAAAACGAAGCAAAATATCTTGGTA.2760.171010000
................................................................................................TACCTATTCACTCTTGCAGCTTG................................................................................................................................................................2360.171100000
....................................................................................................................TTGGTGCAAAAGATGGAACCTGAAGA.........................................................................................................................................2670.141010000
.....................................................................................................................TGGTGCAAAAGATGGAACCTGAAGA.........................................................................................................................................2570.141100000
......................................................................................................TTCACTCTTGCAGCTTGGTGCAAAAGA......................................................................................................................................................2770.141100000
...................................................................................................................CTTGGTGCAAAAGATGGAACCTGAAGAT........................................................................................................................................2870.141100000
...........................................................................................................TCTTGCAGCTTGGTGCAAAAGATGGAACC...............................................................................................................................................2980.131010000
...............................................................................................................GCAGCTTGGTGCAAAAGATGGAACCTGA............................................................................................................................................2880.131100000
........................................................................GAAGCTTCCAATGGATTACAGGAG.......................................................................................................................................................................................2480.131001000
...........................................................................................................TCTTGCAGCTTGGTGCAAAAGATGGAAC................................................................................................................................................2880.131010000
...................................................CAACTACAGATGT--CACAGAGAAGCT.........................................................................................................................................................................................................2590.111100000
.............................................................TGT--CACAGAGAAGCTTCCAA....................................................................................................................................................................................................2090.111100000
................................................TTACAACTACAGATGT--CACAGAGAAGC..........................................................................................................................................................................................................2790.111010000
...................................................CAACTACAGATGT--CACAGAGAAG...........................................................................................................................................................................................................2390.111000001
...................................................CAACTACAGATGT--CACAGAGAAGCTTC.......................................................................................................................................................................................................2790.111010000
......................................................CTACAGATGT--CACAGAGAAGCTTCC......................................................................................................................................................................................................2590.111100000
...............................................TTTACAACTACAGATGT--CACAGAGAAGCT.........................................................................................................................................................................................................2990.111010000
........................................................ACAGATGT--CACAGAGAAGCTTCC......................................................................................................................................................................................................2390.111010000
....................................................AACTACAGATGT--CACAGAGAAGCTTCC......................................................................................................................................................................................................2790.111100000
...............TATTGCGACCTATGCAGATGACA.................................................................................................................................................................................................................................................2390.111000010
.......................................................TACAGATGT--CACAGAGAAGCTTCCA.....................................................................................................................................................................................................2590.111000001
.......................................................TACAGATGT--CACAGAGAAGC..........................................................................................................................................................................................................2090.111100000
.......................................................TACAGATGT--CACAGAGAAGCT.........................................................................................................................................................................................................2190.111001000
...........................................................................................................................................................................................CTCATAATTAATACCCCTCAAAT--CCA-------------AC.................................................28100.101010000
............................................................................................................................................................................................TCATAATTAATACCCCTCAAAT--CCA-------------ACC................................................28100.101010000
...............................................................................................................GCAGCTTGGTGCAAAAGATGGAA.................................................................................................................................................23100.101010000
...............................................................................................................................................................................................TAATTAATACCCCTCAAAT--CCA-------------ACT................................................25100.101010000
.............................................................................................................................................................................................CATAATTAATACCCCTCAAAT--C..................................................................22110.091010000
droBip1
CCTCCAA--AGCTATTATTGCGACCTATGCAGATGACATTGCTGTCATCTACAACTCCAGTTGT--CGCCATGAAGCAGCTAATGGGCTGCAACTCTATCTCGAATCTCTTGCAGCTTGGTGCAAACGGTGGAATTTAAAGATTAATCCGTTGAAAACAACAAACACCTGCTTCACGCTGAAGCGG-AAAATAATGAACACGCCTCAAAT--CCA-------------TCTAGAGGGAGTCACTCTGGAGCAGCCATCACTAGCGAAATACCTAGGCATSizeHit CountTotal NormTotal
No Reads
droKik1
TTC--------------AGGCCATCTATGCTGATGACACCGCATTCCTTGTTAACTCCCCCTGT--CGAAACGAAGCTTCAAGGATCACCCAGGAATTTCTGGACTCATACGGCAAGTGGACCAACAGGTGGAATATTTCTATAAATAATAGAAAGTCGCAGCACTGCAACTTCACTCTTAATGGA-AAGATC------CTCCCTAGGGTTGATC-------------TCTTGATGACATCGCCATCCCACAAGCACCACAGGCGCAGTATTTAGGTCTSizeHit CountTotal NormTotal
No Reads
droFic1
CTTCCAA--AGCTTTGATTGCTACATATGCAGATGACATTGCAGTCATCTACAATTCCAGATGT--CGGAGGGAAGCAGCAAATGGAATACAAGAATACCTTAAGGATCTTTCTGCTTGGTGTAAACGTTGGAATATGAGAATCAATCCGCAAAAAACTACGAACCCCTGCTTTACACTGAAGAGA-CTTGTATCTAACACCCCTGAAAT--CCA-------------GCTAGAGGGAGTCAGTTTGGAACAGCCGTCGCAAGCAAAATATCTTGGTATSizeHit CountTotal NormTotal
No Reads
droEle1
CTT-----------------CTACATTCGCAGACGATACCGCGATCTTAAGTCGGTCCAAATGC--CCAATTCAGGCAACAGCACTACTAGCTGATCATCTCGTGGTAGTGGAGAGGTGGTTATCAGATCGGCGTATAAAAATAAATGCGCAAAAGTGTAAACACATAACGTTTACTCTTAACAGA-CAAACG------TGTCCCCCGCT--AAC-------------TCTGAATGACACGCCACTTCCACAAGCTGACGATGTGACGTACCTTGGCGTSizeHit CountTotal NormTotal
No Reads
droRho1
CGTCAAA--GGCATTAATAGCTACATACGGGGATGATATTGCGGTGCTCTACAGCTCAAAGGAT--CATGTAGAAGCTGGAAATGGTCTACAGATGTACCTGGACGCCCTGGCAAATTGGTGCAGGCGATGGAACTTAAAGGTGAATCCGCTGAAAACCGTCAACCCATGCCTCACATTGAGAAGT-CTTTTA------ACGCCTCCTAT--TCA-------------GATGAAAGGAGTAACCCTTGAGCAGCCGACCCACGCAAAATATCTGGGCATSizeHit CountTotal NormTotal
No Reads
droBia1
TCT--------------TGGCTACATATGCTGATGATACAGCCTTTATTT-CAACTCCATGTGT--CGAAATAAATCGACTCAAATCATTCAAAAATTTTTGATTTTGCATGGCGAATGGACGAATCGATGGAATATTTCGATACATGGTAATATGTCTCAGCACTGAAACTTCTCTCTTCGAAGT-AAAACT------CCCCCCAGAGT--GAA-------------ATTGCAGGACAGAGTCATACCGCAATCAGCCCAGACTCAGTAT-TTGGCCTSizeHit CountTotal NormTotal
No Reads
droTak1
TTAAC-------------AGCTACCTATGCAGATGACACAGTATTTGTGGCGACAAGTGCTCTG--CGAAGAGAGGCGACAGATATGGTGCAGGATATGCTAAATGAGTTTGAGGCCTGGGCGTCGAGGTGGAACATCGCAGTTAATCCAGCCAAATCTCAGCATGCAACCTTTTCATTAAACAGG-CTGA------ACACTTATCGCCT--AAC-------------CTTAGACGGGACTCCAATAAAGCACTCGGACAAGGTTAAGTAGCTTGGACTSizeHit CountTotal NormTotal
No Reads
droEug1
CCTCAAA--AACACTTATTGCGACATATGCAGATGACATTGCAGTCATCTACAACTCAAGTTCTCTGTGGCAGAACCAGATAAGGGTATACAGAATTACCTTACCACCATTGCAGCTTGGTGCAAACGGTAGAACCTAAAGATTAATCCGTCAAAAACAACGAACACCTGTTTTACACTAAAAACA-TTAATAATCAATACCAATGTAAT--CCA-------------GTTAGAGGGAGTTACTCTGGAGCAGCAGTCTCAAGCGAAATACCTTGGTATSizeHit CountTotal NormTotal
No Reads
dm3
CGAACAG--GGCTCTTATTGCAACCTATGCAGATGACATCGCAGTTGTATATAACTCTAGGGAC--AGCAGAGAGGCAGCTAACGGACTGCAATAATATATTAATGCTCTGGCAGCCTGGTGTAAACGGTGGAACCTAAAAATAAACCCACTGAAAACAACAAATCCATGCTTCACATTAAAAACG-CTTGTCCAAAACACCCCTCCAAT--CCG-------------GCTAGAAGGAGTTACCCTGAATCAACCGCTGCAAGCAACATATCTAGGTATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................TTGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................26777.4354200000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000001001000000000000000000000000000000101211001801400010000030000000000000000000000000000000000003100003106727272269000000000001003940123168192000000000000000000000000000000000000000000000000000000000000001003701000000149000000000000000002000000
.............................................TGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................25767.864750000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004010600000000000000000000000000000000000000000000000000000000008741262121500000100000000017019111770000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000042000000
.............................................TGTATATAACTCTAGGGAC--AGCAGAGA.............................................................................................................................................................................................................27765.864610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010100000000000000000000000000000000000000000000000000000000001413224724000000000000000020404120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................TTGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................23860.384830010000000000000000001000000000000000000100000100000200000000000000000000000000000000000000100000000000000010000000000000000000000000000301238053700223501600000000000000000000000000010000003204000214051913158290000000000020038214113140000000000000000000002000000000000000000000000000000000000004000001051210000000211318000000000000000004000000
.......................................CGCAGTTGTATATAACTCTAGGGA........................................................................................................................................................................................................................24754.1437900000000000000000000000000000000000000001100000010000000033910000000000000000000000000000000000000000000000000000000000000000000000300000001000600000150120000000000000000000000000000000000230001001210000000010000000001310010372041000000000000000000000000000000000000000000000000000000000000000003120000000000130000000000010026424512000000
...............................................TATATAACTCTAGGGAC--AGCAGAGA.............................................................................................................................................................................................................25832.63261000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000000000000000000000000000000000000001000463325458600000000000000040203940000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TTGTATATAACTCTAGGGAC--AGCA.................................................................................................................................................................................................................24728.5720000000000000000000000000000000000000000000100000000000000020000000000000000000000000000000001001000000000000000000000000000000001000000001002013000210111100000000000000000000000000020000000003010022000111200000000000100262052201310000000010000000000010000000000000000000000000000000000000010000031212000000135000000000000001001000000
...................................................TAACTCTAGGGAC--AGCAGAGAGG...........................................................................................................................................................................................................23727.29191000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000302324268600000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................CGCAGTTGTATATAACTCTAGGGAC--A....................................................................................................................................................................................................................26719.571370000000000000000000000000000000000000000000000001000000000202000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002000400000000000000000000000000000000000100000120000000000000000001000000010200000000000000000000000000000000000000000000000000000000000000000024000000000040000000000000111173615000000
................................................................................TAACGGACTGCAATAATATATTAATGC............................................................................................................................................................................27319.3358000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000129821500000000000000080101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TATAACTCTAGGGAC--AGCAGAGAGG...........................................................................................................................................................................................................25719.29135000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000202713254020000000000100020001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................TGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................22817.5014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010013000000000000000000000000000000000000000000000000000000000021711256500000000000000010011101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................TGTATATAACTCTAGGGAC--AGCAGAG..............................................................................................................................................................................................................26712.00840000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921543201000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAG--GGCTCTTATTGCAACCTATGCAGA......................................................................................................................................................................................................................................................27311.33340000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001100010200110000000000000000000000000000000000000000100004000401000000000100010402100000000000000000000000000000000000000000000000000000000000000000001101000000100000000000000000110000000
............................................TTGTATATAACTCTAGGGAC--AGCAG................................................................................................................................................................................................................25711.147800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000101200400000000000000000000000000000000000021000020040001000000000000000330900030000000000000000000000000000000000000000000000000000000000000000001501000000303000000000000000000000000
.................................................TATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................21810.7586000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000141710111400000000000000001110003000000000000000000000000000000000000000000000000230000000000000001211000000000000000000000002000000000
...............................................TATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................23810.75860000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001523872700000000000100000100200000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................TCGCAGTTGTATATAACTCTAGGGAC--A....................................................................................................................................................................................................................27710.57740000000000000000000000200000000000000000000000000000000000400000000000000000000000000010000000000000000000000000000000000000000000000000000000450041000020000000000000000000000000000000000022002400006005202000104000100030100120000000000000000000000000000000000000000000000000000000000001000001300000000212000000000000001011000000
...................................................TAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................1989.507600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013128182400000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...................................................TAACTCTAGGGAC--AGCAGAGAGGCAGC.......................................................................................................................................................................................................2768.675200000000000000000000000000000000000000010000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000010010000001000000000010000000000000000000000000020000000000000000002013000100110000300000001000000000000000000000000000000000000000000000000000000000000000000000304000000303000000000000003401000000
...................................................TAACTCTAGGGAC--AGCAGAGAGGCA.........................................................................................................................................................................................................2568.50510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000005135131200000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................CTAGAAGGAGTTACCCTGAA..............................2078.4359000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000881352500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAACTCTAGGGAC--AGCAGAGA.............................................................................................................................................................................................................2188.13650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000001316511300000000000100011020016000000000000000000000000000000000000000000000000010000000000000000101000000000000000000000000000000000
.......................................CGCAGTTGTATATAACTCTAGGGAC--.....................................................................................................................................................................................................................2577.865500000000000000000000000000000000000000000000000010000000007000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000400000000000000000000000000000000000000101000010000000000000000000200000110010000000000000000000000000000000000000000000000000000000000000000000500000000005000000000000002633000000
....................................................................................................................................................................................................................................GCTAGAAGGAGTTACCCTGAA..............................2177.145000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101041500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................TATAACTCTAGGGAC--AGCAGAGAGGCA.........................................................................................................................................................................................................2767.004200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000079412500000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000
....................................................AACTCTAGGGAC--AGCAGAGAGGC..........................................................................................................................................................................................................2366.173700000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000040000000010000000003000000021000000000000010000000000000000000000000000000000000000000000000000001200000000112000000000001001400000000
................................................................................TAACGGACTGCAATAATATATTAAT..............................................................................................................................................................................2536.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013200000000000000020302020000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................TCTGGCAGCCTGGTGTAAACGGTG....................................................................................................................................................2456.00300000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100011000010000000000000000000000000000000000210000000030000000000000000300800000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000510000000
.................................................TATAACTCTAGGGAC--AGCAGAGA.............................................................................................................................................................................................................2385.8847000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117261600000000000100000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TATAACTCTAGGGAC--AGCAGAGAGGC..........................................................................................................................................................................................................2665.83350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000030000000000000000000000000000000000000000000003143200000000000100010000010000000000000000000000000000000000000000000000000000000000001000002200000000001000000000000001312000000
......................................TCGCAGTTGTATATAACTCTAGGGA........................................................................................................................................................................................................................2575.43380000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100010100023000000000000000000001000000000000002000000001030000030100000000000801110000000001000000000000000000000000000000000000000000000000000000010300000000100000000000000000010000000
..................................................ATAACTCTAGGGAC--AGCAGAGAGG...........................................................................................................................................................................................................2475.003500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000083911100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................TCGCAGTTGTATATAACTCTAGGGAC--.....................................................................................................................................................................................................................2675.00350000000000000000000000000000000000000000000000100000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000110020000020010000000000000000000000000000000000000000001003207400000000000000010110000000000000000000000000000000000000000000000000000000000000000000002100000000101000000000000000000000000
.......................................CGCAGTTGTATATAACTCTAGGGAC--AG...................................................................................................................................................................................................................2774.86340000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000100000000000300000100000000000000000000000000000000000000000000008000000000000000000000000010020000000000000000000000000000000000000000000000000000000000000000000200010000003000000000000002111000000
...........................................GTTGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................2774.86340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100004010100000000000000000000000000000000000000000000000000000000003050300000000000100040202410000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
............................................TTGTATATAACTCTAGGGAC--A....................................................................................................................................................................................................................2184.63370000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000304000000000000005000000000000000000000000000000000000000000000000000000000000000040200002000000000000000000000000000000000000000000000000140000000000000001300000000210000000000000000102000000
...............................................TATATAACTCTAGGGAC--AGCAGAG..............................................................................................................................................................................................................2484.50360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000007656800000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AAGGAGTTACCCTGAATCAACCGCT.....................2534.33130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010400000000000000020300100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TTGTATATAACTCTAGGGAC--AGCATC...............................................................................................................................................................................................................2674.293000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................T--CCG-------------GCTAGAAGGAGTTACCCTGAATC............................2754.20210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000101140103620000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTAATGCTCTGGCAGCCTGGTGTA...........................................................................................................................................................2664.17250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000400000010000000000000001170600120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................AACGGACTGCAATAATATATTAATGC............................................................................................................................................................................2634.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001422200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TATTGCAACCTATGCAGATGACATCGCA............................................................................................................................................................................................................................................2854.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040224350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TATATAACTCTAGGGAC--AGCAGAGAGG...........................................................................................................................................................................................................2773.86270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004720900000000000000000010110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
.......................................CGCAGTTGTATATAACTCTAGGG.........................................................................................................................................................................................................................2373.71260000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000300000003000000000000000000000000000000000000000000000000000000002000000000000000000100000111011000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000020000000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAACCGC......................2733.67110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000120103200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TATATAACTCTAGGGAC--AGCA.................................................................................................................................................................................................................2183.632900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000100000050000000000000000000000000000000000000000000001003110000000000000002300000000000000000000000001000000000
..............................................GTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................2183.63290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000200000000000000000000000000000000000000000000000000000000000000000004231001000000000001000000000000000000000000000000000000020000000002000000212000000020000000000000000100000000
.....................................................................................................................................................................................................................................CTAGAAGGAGTTACCCTGAATC............................2273.572500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011512600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AACTCTAGGGAC--AGCAGAGAGGCAGC.......................................................................................................................................................................................................2663.50210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000006000000000000000000000000000000000000000000000000000000000000000000000000001000001302000000211000000000000000002000000
...........................................................................................................TCTGGCAGCCTGGTGTAAACGGT.....................................................................................................................................................2353.40170000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300001010000000000000000000000000000000000000000000000000000000000000000000610000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001020000000
..................................................................................................TATTAATGCTCTGGCAGCCTGGTGT............................................................................................................................................................2563.33200000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000070000100000000000000400201010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000
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...................................................................................CGGACTGCAATAATATATTAATGCTC..........................................................................................................................................................................2630.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TCCAAT--CCG-------------GCTAGAAGGAGTTACCC..................................2630.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................AACGGACTGCAATAATATATTAATG.............................................................................................................................................................................2530.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CCTGAATCAACCGCTGCAAGCAACATA.........2730.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................AACGGACTGCAATAATATATTAAT..............................................................................................................................................................................2430.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AACTCTAGGGAC--AGCAGAGA.............................................................................................................................................................................................................2080.6350000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................ATATAACTCTAGGGAC--AGCAGAGA.............................................................................................................................................................................................................2480.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000300000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TGTATATAACTCTAGGGAC--.....................................................................................................................................................................................................................1980.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TGTATATAACTCTAGGGAC--A....................................................................................................................................................................................................................2080.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
.....................................................................................................TAATGCTCTGGCAGCCTGGTGTAAACG.......................................................................................................................................................2750.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AT--CCG-------------GCTAGAAGGAGTTACCCTGAA..............................2650.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGCTCTGGCAGCCTGGTGTAAACG.......................................................................................................................................................2450.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TCTGGCAGCCTGGTGTAAACG.......................................................................................................................................................2150.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................T--CCG-------------GCTAGAAGGAGTTACCCTGAA..............................2550.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GCTCTGGCAGCCTGGTGTAAACGGT.....................................................................................................................................................2550.6030000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CATCGCAGTTGTATATAACTCTAGGGA........................................................................................................................................................................................................................2770.5740000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAAT.............................2070.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CCTAAAAATAAACCCACTGAAAAC.........................................................................................................................2470.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAACCTATGCAGATGACATCG..............................................................................................................................................................................................................................................2170.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000002000000000000000000000000000000000
......................................TCGCAGTTGTATATAACTCTAGGGAC--AG...................................................................................................................................................................................................................2870.5740000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000001000000000000000000000000
..............................................GTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................2470.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CGCAGTTGTATATAACTCTAG...........................................................................................................................................................................................................................2170.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AACCTATGCAGATGACATCG..............................................................................................................................................................................................................................................2070.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000001000000000000000000000000000001000
............................................................GGAC--AGCAGAGAGGCAGCTAA....................................................................................................................................................................................................2190.5650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000110000000000000001100000000000000000000000000000000000
.................................................TATAACTCTAGGGAC--AGCAG................................................................................................................................................................................................................2080.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000110000000000000000000000000000000000
............................................................................................................................AACGGTGGAACCTAAAAATAAACC...................................................................................................................................2440.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGAAAAG--GACTCTTATTGCAACATATGCAGATGACATCGCAGTTGTATATAACTCTAGGGAC--AGCAGAGAAGCAGCTAACGGACTACAAGAATATATAAATGCTCGGGCAGCCTGGTG-AAACGGTGGAACCTAAAAATAAACCCACTGAAAACAACAAATCCATGCTTCACATTAAAAACG-CTTATCCCGAACACCCCTCCAAT--CCG-------------GCTAGAAGGAGTTACCCTGAATCAGCCCCTGCAAGCAACATATCTAGGTATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................AGTTGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................25765.2945700055701291066629504911000
..........................................AGTTGTATATAACTCTAGGGAC--AGCA.................................................................................................................................................................................................................26743.86307000000104701023154000
........................................................................GAAGCAGCTAACGGACTACAAGAATA.....................................................................................................................................................................................26128.0028000000110120230000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAG................................................................................................................................................................................................................27717.431220000000100006655000
..........................................................................AGCAGCTAACGGACTACAAGAATATA...................................................................................................................................................................................26117.0017000000000000170000
..................TGCAACATATGCAGATGACATCGCAGT..........................................................................................................................................................................................................................................27110.001000000027100000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................2879.86690000001300003233000
..........................................................................AGCAGCTAACGGACTACAAGAATATATA.................................................................................................................................................................................2819.00900000000000090000
................................................................................TAACGGACTACAAGAATATATAAATGC............................................................................................................................................................................2719.00900000044010000000
........................................................................GAAGCAGCTAACGGACTACAAGAA.......................................................................................................................................................................................2418.00800000024100010000
.................................................................................................................................................................................................................T--CCG-------------GCTAGAAGGAGTTACCCTGAATC............................2718.00800200003210000000
..........................................................................AGCAGCTAACGGACTACAAGAATATAT..................................................................................................................................................................................2717.00700000001000060000
.....AG--GACTCTTATTGCAACATATGCAGA......................................................................................................................................................................................................................................................2617.00700000041100010000
.....................................................................AGAGAAGCAGCTAACGGACTACAAGAA.......................................................................................................................................................................................2716.00600010001010030000
..........................................................................AGCAGCTAACGGACTACAAGAATAT....................................................................................................................................................................................2516.00600000000000060000
........................................................................GAAGCAGCTAACGGACTACAAGAATATA...................................................................................................................................................................................2816.00600000000000060000
....AAG--GACTCTTATTGCAACATATGCAGA......................................................................................................................................................................................................................................................2716.00600000021300000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAA................................................................................................................................................................................................................2775.57390000000000002415000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAGCCCC......................27105.00500021001914752000000
......................................................................................ACTACAAGAATATATAAATGCTCGGGC......................................................................................................................................................................2715.00500000050000000000
.................................................................................................................................................................................................................T--CCG-------------GCTAGAAGGAGTTACCCTGAA..............................2515.00500000001000022000
...................................................................................CGGACTACAAGAATATATAAATGC............................................................................................................................................................................2415.00500000004010000000
..........................................................................AGCAGCTAACGGACTACAAGAATA.....................................................................................................................................................................................2415.00500000000000050000
..........................................AGTTGTATATAACTCTAGGGAC--AG...................................................................................................................................................................................................................2494.89440001003910201711000
............................................TTGTATATAACTCTAGGGAC--AG...................................................................................................................................................................................................................2294.67420000212100000000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAT................................................................................................................................................................................................................2774.43310000000000001021000
........................................................................................TACAAGAATATATAAATGCTCGGGC......................................................................................................................................................................2514.00400000002200000000
.GAAAAG--GACTCTTATTGCAACATA............................................................................................................................................................................................................................................................2414.00400000031000000000
..........................................AGTTGTATATAACTCTAGGGAC--A....................................................................................................................................................................................................................2393.112800010073730052000
................................................................................................TATATAAATGCTCGGGCAGCCTGG...............................................................................................................................................................2413.00300000011100000000
........................................................................................................TGCTCGGGCAGCCTGGTG-AAACGGT.....................................................................................................................................................2513.00300000001000020000
................................................................................................................................GTGGAACCTAAAAATAAACCCACTG..............................................................................................................................2582.5020000119000000000000
..........................................AGTTGTATATAACTCTAGGGA........................................................................................................................................................................................................................2192.442200000066370000000
..........................................AGTTGTATATAACTCTAGGG.........................................................................................................................................................................................................................2092.3321000021000000000000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAGC.........................24132.082700000096345000000
....................................................................................................................CTGGTG-AAACGGTGGAACCTAAA...........................................................................................................................................2312.00200000010000010000
...AAAG--GACTCTTATTGCAACATATGCAGA......................................................................................................................................................................................................................................................2812.00200000020000000000
...................................................................................CGGACTACAAGAATATATAAATGCTCGGGC......................................................................................................................................................................3012.00200000020000000000
..................TGCAACATATGCAGATGACATCGC.............................................................................................................................................................................................................................................2412.00200000010010000000
.........................TATGCAGATGACATCGCA............................................................................................................................................................................................................................................1872.0014000014000000000000
......................................................................................................AATGCTCGGGCAGCCTGGTG-AAACGG......................................................................................................................................................2612.00200000001001000000
.....................................................................................................................TGGTG-AAACGGTGGAACCTAAAAA.........................................................................................................................................2412.00200000000100010000
.GAAAAG--GACTCTTATTGCAACATATG..........................................................................................................................................................................................................................................................2612.00200000011000000000
................................................................................................TATATAAATGCTCGGGCAGCCTGGTG-A...........................................................................................................................................................2712.00200000002000000000
.................................................................................................................................................................................................................T--CCG-------------GCTAGAAGGAGTTACCCTGA...............................2412.00200000001000001000
........................................GCAGTTGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................2771.861300000005421010000
...........................................................................GCAGCTAACGGACTACAA..........................................................................................................................................................................................1881.7514000014000000000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCT.................................................................................................................................................................................................................2671.711200000021100044000
.....................................................................................................................................................................................................................CG-------------GCTAGAAGGAGTTACCCTGAATC............................25101.601600010071133000000
............................................TTGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................2671.571100000010100081000
.........................................................................................................................................................................................................................................................TCAGCCCCTGCAAGCAACATATCTAGGTA.2991.4413000000310000000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAC................................................................................................................................................................................................................2771.431000000000100063000
......................................TCGCAGTTGTATATAACTCTAGGGA........................................................................................................................................................................................................................2581.381100000002270000000
..........................................AGTTGTATATAACTCTAGGGAC--.....................................................................................................................................................................................................................2291.221100000021221012000
...................................................................................CGGACTACAAGAATATATAAATGCTCG.........................................................................................................................................................................2711.00100000010000000000
........................................................................................................TGCTCGGGCAGCCTGGTG-AAACGGTGT...................................................................................................................................................2711.00100000001000000000
........................................................................GAAGCAGCTAACGGACTACAAGAATAT....................................................................................................................................................................................2711.00100000000000010000
...AAAG--GACTCTTATTGCAACATATGCAGAA.....................................................................................................................................................................................................................................................2911.00100000000000010000
..................................................................................................................................................................................................CGAACACCCCTCCAAT--CCG-------------GCTAGA.............................................2511.00100000010000000000
........................................................................GAAGCAGCTAACGGACTACAAGAAT......................................................................................................................................................................................2511.00100000010000000000
........................................................................GAAGCAGCTAACGGACTACAAGAATT.....................................................................................................................................................................................2611.00100000000000010000
..................................................................................................TATAAATGCTCGGGCAGCCTGGTG-A...........................................................................................................................................................2511.00100000001000000000
....................................................................................................................................................................................................................CCG-------------GCTAGAAGGAGTTACCCTG................................2211.00100000000000010000
...................................................................................CGGACTACAAGAATATATAAATGCTC..........................................................................................................................................................................2611.00100000001000000000
...........................................................................................................TCGGGCAGCCTGGTG-AAACGGTGGAAC................................................................................................................................................2711.00100000000000010000
..........................................................................AGCAGCTAACGGACTACAAGAATATAA..................................................................................................................................................................................2711.00100000000000010000
...........................................................................................................TCGGGCAGCCTGGTG-AAACGGTGGAAA................................................................................................................................................2711.00100000000010000000
...........................................................................................................TCGGGCAGCCTGGTG-AAACGG......................................................................................................................................................2111.00100000000000010000
....................................................................CAGAGAAGCAGCTAACGGACTACAAGAA.......................................................................................................................................................................................2811.00100000000000010000
..................................................................AGCAGAGAAGCAGCTAACGGACTACAAGAA.......................................................................................................................................................................................3011.00100000001000000000
...............TATTGCAACATATGCAGATGACATCG..............................................................................................................................................................................................................................................2611.00100000000000010000
.................TTGCAACATATGCAGATGACATCGCT............................................................................................................................................................................................................................................2611.00100000010000000000
...........................................................................................................................................................................................................................................................AGCCCCTGCAAGCAACATATCTAGGTA.27101.001000000025030000000
................................................................................................TATATAAATGCTCGGGCAGCCTGGTG-AAAC........................................................................................................................................................3011.00100000010000000000
.................TTGCAACATATGCAGATGACATCGCA............................................................................................................................................................................................................................................2611.00100000000100000000
.GAAAAG--GACTCTTATTGCAACATATGCAGA......................................................................................................................................................................................................................................................3011.00100000010000000000
.................TTGCAACATATGCAGATGACATCG..............................................................................................................................................................................................................................................2411.00100000000010000000
...........................................................................................................................................................................................CTTATCCCGAACACCCCTCCAAT--C..................................................................2411.00100000010000000000
..................TGCAACATATGCAGATGACATCGT.............................................................................................................................................................................................................................................2411.00100000010000000000
...........................................................................................................TCGGGCAGCCTGGTG-AAACGGTGGAACC...............................................................................................................................................2811.00100000010000000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAGT...............................................................................................................................................................................................................2871.00700000000000016000
.......................................................................AGAAGCAGCTAACGGACTACAAGAA.......................................................................................................................................................................................2511.00100000001000000000
.....................................................................................................................TGGTG-AAACGGTGGAACCTAAAAATAA......................................................................................................................................2711.00100000000000010000
.................................................................................................................AGCCTGGTG-AAACGGTGGAACCTAAA...........................................................................................................................................2611.00100000000100000000
............................................................................................................CGGGCAGCCTGGTG-AAACGGTGGAACC...............................................................................................................................................2711.00100000010000000000
................................................................................TAACGGACTACAAGAATATATAAA...............................................................................................................................................................................2411.00100000010000000000
.......................................................TCTAGGGAC--AGCAGAGAAGCAGCT......................................................................................................................................................................................................2411.00100000000000010000
.............................................................................................GAATATATAAATGCTCGGGCAGCCT.................................................................................................................................................................2511.00100000001000000000
......................................................................................ACTACAAGAATATATAAATGCTCGGGT......................................................................................................................................................................2711.00100000010000000000
..................................................................................................TATAAATGCTCGGGCAGCCTGGTG-AAACG.......................................................................................................................................................2911.00100000010000000000
........................................................................................................TGCTCGGGCAGCCTGGTG-AAACGGTA....................................................................................................................................................2611.00100000000000010000
...............................................................................................ATATATAAATGCTCGGGCAGCCTGG...............................................................................................................................................................2511.00100000000100000000
....................................................................................................TAAATGCTCGGGCAGCCTGGTG-AAACGG......................................................................................................................................................2811.00100000000000010000
........................................................................................................................TG-AAACGGTGGAACCTAAAAATAAAC....................................................................................................................................2611.00100000001000000000
...................................................................................CGGACTACAAGAATATATAAATGCT...........................................................................................................................................................................2511.00100000010000000000
....................................................................................................................................................................................................................CCG-------------GCTAGAAGGAGTTACCCTGAATC............................2611.00100000001000000000
.GAAAAG--GACTCTTATTGCAACATATGC.........................................................................................................................................................................................................................................................2711.00100000001000000000
......................................................................................ACTACAAGAATATATAAATGCTCGGG.......................................................................................................................................................................2611.00100000000000010000
.........................................................TAGGGAC--AGCAGAGAAGCAGCTAA....................................................................................................................................................................................................2411.00100000000100000000
........................................GCAGTTGTATATAACTCTAGGGAC--AGCA.................................................................................................................................................................................................................2871.00700000000100051000
.........................................................................AAGCAGCTAACGGACTACAAGAATATA...................................................................................................................................................................................2711.00100000000000010000
......................................................................................................AATGCTCGGGCAGCCTGGTG-AAACGGTG....................................................................................................................................................2811.00100000000000010000
.................................................................................................................................................................................................................T--CCG-------------GCTAGAAGGAGTTACCCTGTT..............................2511.00100000000000001000
...........................................................................................................TCGGGCAGCCTGGTG-AAACGGTG....................................................................................................................................................2311.00100000001000000000
..............................................................................................AATATATAAATGCTCGGGCAGCCTGG...............................................................................................................................................................2611.00100000001000000000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAGCCCCT.....................2890.78700010030300000000
.........................................................................................................................................................................................................................................................TCAGCCCCTGCAAGCAACATATCTAGG...2790.67600000015000000000
.................................TGACATCGCAGTTGTATATAACTCT.............................................................................................................................................................................................................................2590.67600000011220000000
......................................TCGCAGTTGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................2960.67400000011110000000
..........................................................................................................................................................................................................................................AGGAGTTACCCTGAATCAGCCCCTGCAAG................2980.63500000032000000000
......................................TCGCAGTTGTATATAACTCTAGGGAC--A....................................................................................................................................................................................................................2780.63500000001220000000
...........................................GTTGTATATAACTCTAGGGAC--AGCAG................................................................................................................................................................................................................2670.57400000000000013000
..........................................................................................................................................................................................................................................AGGAGTTACCCTGAATCAGCCCCTGC...................2690.56500000031000001000
..........................................AGTTGTATATAACTCTAGGGAC--AGT..................................................................................................................................................................................................................2590.56500000000110021000
..................................................................................................................................................................................................................................................CCCTGAATCAGCCCCTGCAAGCAACA...........2680.50400000003000010000
......................................TCGCAGTTGTATATAACTCTAGGGAC--AG...................................................................................................................................................................................................................2880.50400000002020000000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAGCCC.......................26100.50500000012101000000
..........................................................................AGCAGCTAACGGACTACAAGAATATATT.................................................................................................................................................................................2860.50300000000000030000
..........................................AGTTGTATATAACTCTAGGGAC--AA...................................................................................................................................................................................................................2490.44400000000000022000
................................................................................................................................................................................................................................................TACCCTGAATCAGCCCCTGCAAGCAA.............2670.43300000000000003000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAGAT..............................................................................................................................................................................................................2970.43300000000000003000
.............................................TGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................2570.43300000001000011000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAGC...............................................................................................................................................................................................................2870.43300000000000012000
...............................................TATATAACTCTAGGGAC--AGCA.................................................................................................................................................................................................................2170.43300000000000012000
..........................................AGTTGTATATAACTCTAGGGAC--AGCATT...............................................................................................................................................................................................................2870.43300000000000012000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAGCC........................25120.42500000022010000000
......................................TCGCAGTTGTATATAACTCTAGGGAC--.....................................................................................................................................................................................................................2680.38300000001011000000
..................................................................................................................................................................................................................................................CCCTGAATCAGCCCCTGCAAGCAAC............2580.38300000012000000000
...............................................................................................................................................................................................................................................TTACCCTGAATCAGCCCCTGCAAGC...............2580.38300000001001010000
................................................................................................................................GTGGAACCTAAAAATAAACCCACTGA.............................................................................................................................2680.38300030000000000000
..........................................................................................................................................................................................................................................AGGAGTTACCCTGAATCAGCCCCTGCA..................2780.38300000011000010000
..................................................................................................................................................................................................................................................CCCTGAATCAGCCCCTGCAAGCAA.............2480.38300000001000020000
...........................................................................GCAGCTAACGGACTACAAGAATATAT..................................................................................................................................................................................2660.33200000000000011000
..........................................AGTTGTATATAACTCTAGGGAC--AT...................................................................................................................................................................................................................2490.33300000010000020000
..................................................................................................................................................................................................................................................CCCTGAATCAGCCCCTGCAAGC...............2290.33300000003000000000
.............................................................................AGCTAACGGACTACAAGAATATAT..................................................................................................................................................................................2460.33200000001000010000
...........................................................................GCAGCTAACGGACTACAAGAATAT....................................................................................................................................................................................2460.33200000010000010000
..........................................AGTTGTATATAACTCTAGGGAC--AGA..................................................................................................................................................................................................................2590.33300000010001010000
........................................................................................................................................................................................................................................GAAGGAGTTACCCTGAATCAGCCCC......................25100.30300000003000000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAGAA..............................................................................................................................................................................................................2970.29200000000000002000
.................................................................................................................................................................................................................................................ACCCTGAATCAGCCCCTGCAAGCAACA...........2770.29200000010000001000
............................................TTGTATATAACTCTAGGGAC--AGCAG................................................................................................................................................................................................................2570.29200000000000020000
............................................TTGTATATAACTCTAGGGAC--AGCAC................................................................................................................................................................................................................2570.29200000200000000000
...............................................TATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................2370.29200000001000010000
........................................GCAGTTGTATATAACTCTAGGGAC--AGCAA................................................................................................................................................................................................................2970.29200000000000011000
...............................................................................................................................................................................................................................................TTACCCTGAATCAGCCCCTGCAAGCAA.............2770.29200000000000020000
...................................................................................................................................GAACCTAAAAATAAACCCACTGAA............................................................................................................................2480.25200000001010000000
................................................................................................................................................................................................................................................TACCCTGAATCAGCCCCTGCAAGC...............2480.25200000001100000000
.......................................................................................................................................................TGAAAACAACAAATCCATGCTTCACA......................................................................................................2640.25100010000000000000
......................................................................................................................................................................................AACG-CTTATCCCGAACACCCCTCCAA......................................................................2640.25100000010000000000
..................................................................................................................................................................................................................................................CCCTGAATCAGCCCCTGCAAGCAACATA.........2880.25200000000200000000
...............................................................................................................................................................................................................................................TTACCCTGAATCAGCCCCTGCAAG................2480.25200000011000000000
...........................................................................................................................................................AACAACAAATCCATGCTTCG........................................................................................................2040.25100000000000001000
................................................................................................................................GTGGAACCTAAAAATAAACCCACT...............................................................................................................................2480.25200000010001000000
...........................................................................................................................................................AACAACAAATCCATGCTTCACATTAAAA................................................................................................2840.25100000010000000000
...............................................................................................................................................................................................................................................TTACCCTGAATCAGCCCCTGCAA.................2380.25200000000000020000
........................................................................................................................................................................................................................................................ATCAGCCCCTGCAAGCAACATATCTAGGTA.3090.22200000002000000000
..........................................AGTTGTATATAACTCTAGGGAC--TTT..................................................................................................................................................................................................................2590.22200000000000020000
........................................................................................................................................................................................................................................................ATCAGCCCCTGCAAGCAACATATCTAGG...2890.22200000011000000000
..........................................AGTTGTATATAACTCTAGGGAC--AC...................................................................................................................................................................................................................2490.22200000000000002000
..................................................................................................................................................................................................................................................CCCTGAATCAGCCCCTGCAAGCA..............2390.22200000001000001000
..........................................AGTTGTATATAACTCTAGGGAC--AGTT.................................................................................................................................................................................................................2690.22200000000000020000
.................................TGACATCGCAGTTGTATATAACTCTA............................................................................................................................................................................................................................2690.22200000010010000000
..................................................................................................................................................................................TAAAAACG-CTTATCCCGAACACCCC...........................................................................2550.20100000001000000000
......................................................................................................................................................................................................................G-------------GCTAGAAGGAGTTACCCTGAATC............................24100.20200000000002000000
..............................................................................................................................................TAAACCCACTGAAAACAACAAATCCA...............................................................................................................2650.20100000000000010000
........................................................................................................................................TAAAAATAAACCCACTGAAAACAACAAA...................................................................................................................2850.20100000000100000000
....................................................................................................................................................................................AAAACG-CTTATCCCGAACACCCCTC.........................................................................2550.20100010000000000000
....................................................................................................................................................................................AAAACG-CTTATCCCGAACACCCC...........................................................................2350.20100000000001000000
..........................................................................................................................................................................................................................................AGGAGTTACCCTGAATCAGCCCC......................23100.20200000011000000000
..............................................................................................................................................................................................................................................................CCCTGCAAGCAACATATCTAGGTA.24110.18200000000010010000
...........................................................................GCAGCTAACGGACTACAAGAATATA...................................................................................................................................................................................2560.17100000000000010000
....................................................................................................................................................................................AAAACG-CTTATCCCG...................................................................................15120.17200000000002000000
.....................................ATCGCAGTTGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................3060.17100000001000000000
.............................................TGTATATAACTCTAGGGAC--AGCAGAGA.............................................................................................................................................................................................................2760.17100000000000010000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAGAGA.............................................................................................................................................................................................................3060.17100000010000000000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAAT.............................20130.15200000000002000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAGAG..............................................................................................................................................................................................................2970.14100000000000001000
............................GCAGATGACATCGCAG...........................................................................................................................................................................................................................................1670.14100000000001000000
............................................TTGTATATAACTCTAGGGAC--AGCA.................................................................................................................................................................................................................2470.14100000000000010000
..........................ATGCAGATGACATCGC.............................................................................................................................................................................................................................................1670.14100000000001000000
...................................................................................................................................................CCACTGAAAACAACAAATCCATGCTT..........................................................................................................2670.14100000000001000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCTA................................................................................................................................................................................................................2770.14100000000000010000
.................................................................................................................................................................................................................................................ACCCTGAATCAGCCCCTGCAAGCAA.............2570.14100000000000010000
..........................................AGTTGTATATAACTCTAGGGAC--AGCTT................................................................................................................................................................................................................2770.14100000000000010000
...............................GATGACATCGCAGTTGTATATAACTCT.............................................................................................................................................................................................................................2770.14100000001000000000
...........................................GTTGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................2770.14100000000000010000
.............................................TGTATATAACTCTAGGGAC--AGCA.................................................................................................................................................................................................................2370.14100000000000010000
..........................................AGTTGTATATAACTCTAGGGAC--AGCAAT...............................................................................................................................................................................................................2870.14100000000000001000
.............................................TGTATATAACTCTAGGGAC--AGCAG................................................................................................................................................................................................................2470.14100000000000010000
.........................................CAGTTGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................2670.14100000001000000000
............................GCAGATGACATCGCAGT..........................................................................................................................................................................................................................................1770.14100000000001000000
..........................................AGTTGTATATAACTCTAGGGAC--AGCGAT...............................................................................................................................................................................................................2870.14100000000000001000
................................................................................................................................................................................................................................................TACCCTGAATCAGCCCCTGCAAGCAACAT..........2970.14100000000000010000
................................................................................................................................................................................................................................................TACCCTGAATCAGCCCCTGCAAGCAACA...........2870.14100000000000010000
........................................GCAGTTGTATATAACTCTAGGGAC--AGCAG................................................................................................................................................................................................................2970.14100000000000001000
........................................................................................................................................................................TGCTTCACATTAAAAACG-CTTATCCCGAA.................................................................................2970.14100000010000000000
................................................................................................................................................................................................................................................TACCCTGAATCAGCCCCTGCAAGCAAC............2770.14100000000000010000
.............................................TGTATATAACTCTAGGGAC--AGCAGAG..............................................................................................................................................................................................................2670.14100000000000010000
.................................................................................................................................................................................................................................................................TGCAAGCAACATATCTAGGTA.21140.14200000002000000000
.................................TGACATCGCAGTTGTATATAACTCTAGG..........................................................................................................................................................................................................................2880.13100000010000000000
.......................................CGCAGTTGTATATAACTCTAGGGAC--AG...................................................................................................................................................................................................................2780.13100000001000000000
.......................................CGCAGTTGTATATAACTCTAGGGA........................................................................................................................................................................................................................2480.13100000010000000000
droSec2
CCGAAAAAGAACTCTTATTGCAACCTATGCAGATGACATCGCAGTTGTATATAACTCTAGGGAC--AGCAGAGTAGCAGCTAACGGACTACAAGAATATATTAATGCTCTGACAGCCTGGTGTAAACGGTGGAACCTAAAAATAAACCCACTGAAAACAACAAACCCGTGCTTCACGTTAAAAACG-CTTATCCCGAACACCCCTCCAAT--TCG-------------TCTAGAAGGAGTTACCCTGAATCAGCCCCTGCAAGCAACATATCTAGGTATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................TTGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................26200.50109010
............................................TTGTATATAACTCTAGGGAC--AGCA.................................................................................................................................................................................................................24200.4597011
............................................TTGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................23200.2042011
........................................................................................................................................................................................CG-CTTATCCCGAACACCCCTCCAA......................................................................24200.2044000
................................................................................................................................GTGGAACCTAAAAATAAACCCACTGA.............................................................................................................................26200.1533000
................................................................................................................................GTGGAACCTAAAAATAAACCCACTGAA............................................................................................................................27200.1533000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAGCCCC......................27180.1122000
.............................................TGTATATAACTCTAGGGAC--AGCAGA...............................................................................................................................................................................................................25200.1022000
..........ACTCTTATTGCAACCTATGCAGA......................................................................................................................................................................................................................................................23200.1022000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAGCC........................25200.1022000
........................................................................................................................................................................................CG-CTTATCCCGAACACCCCTCCAAT--T..................................................................26200.1022000
........................................................................................................................................................................................CG-CTTATCCCGAACACCCCTCCA.......................................................................23200.1022000
................................................................................................................................................................................................................................................TACCCTGAATCAGCCCCTGCAAGCAAC............27140.0711000
....................................................................................................................................................................................................................................................CTGAATCAGCCCCTGCAAGCAACATA.........26140.0711000
.................................................................................................................................................ACCCACTGAAAACAACAAACCCGTGC............................................................................................................26180.0611000
......................................................................................................................................................................................................................................TAGAAGGAGTTACCCTGAATCAGCCC.......................26180.0611000
.........................................................................................................................................................................................................................................AAGGAGTTACCCTGAATCAGCCCC......................24180.0611000
..........................................................................................................................................................................................................................................AGGAGTTACCCTGAATCAGCCCC......................23190.0511000
..........................................................................................................................................................................................................................................AGGAGTTACCCTGAATCAGCCCCTGC...................26190.0511000
............................................TTGTATATAACTCTAGGGAC--AGCAGAA..............................................................................................................................................................................................................27200.0511000
..................TGCAACCTATGCAGATGACATCGCAGT..........................................................................................................................................................................................................................................27200.0510010
........................................................................................................................................................................................CG-CTTATCCCGAACACCCCTCCAC......................................................................24200.0511000
............................................TTGTATATAACTCTAGGGAC--AGCACT...............................................................................................................................................................................................................26200.0511000
............................................................................................................................................................ACAACAAACCCGTGCTTCACGTTAAA.................................................................................................26200.0511000
.....................................ATCGCAGTTGTATATAACTCTAGGGAC--.....................................................................................................................................................................................................................27200.0511000
.......................................................................................................................................................TGAAAACAACAAACCCGTGCTTCACGTTA...................................................................................................29200.0511000
............................................TTGTATATAACTCTAGGGAC--AGCAC................................................................................................................................................................................................................25200.0510001
..........ACTCTTATTGCAACCTATGCAGATGACA.................................................................................................................................................................................................................................................28200.0511000
...........CTCTTATTGCAACCTATGCAGATG....................................................................................................................................................................................................................................................24200.0511000
..........ACTCTTATTGCAACCTATGCAGAT.....................................................................................................................................................................................................................................................24200.0511000
......................................TCGCAGTTGTATATAACTCTAGGGAC--A....................................................................................................................................................................................................................27200.0510010
........................................GCAGTTGTATATAACTCTAGGGAC--AG...................................................................................................................................................................................................................26200.0511000
............................................TTGTATATAACTCTAGGGAC--AGCAG................................................................................................................................................................................................................25200.0510010
..........................................................................................................................TAAACGGTGGAACCTAAAAATAAACC...................................................................................................................................26200.0511000
............................................TTGTATATAACTCTAGGGAC--AGCAT................................................................................................................................................................................................................25200.0511000
........................................GCAGTTGTATATAACTCTAGGGAC--AGC..................................................................................................................................................................................................................27200.0511000
.............CTTATTGCAACCTATGCAGATGACAT................................................................................................................................................................................................................................................26200.0510001
.................................................................................................................................TGGAACCTAAAAATAAACCCACTGA.............................................................................................................................25200.0511000
........................................................................................................................................................................................CG-CTTATCCCGAACACCCCTCC........................................................................22200.0511000
........................................................................................................................TGTAAACGGTGGAACCTAAAAATAAAC....................................................................................................................................27200.0510010
................................................................................................................................GTGGAACCTAAAAATAAACCCACTG..............................................................................................................................25200.0511000
.................................................................................................................................TGGAACCTAAAAATAAACCCACTG..............................................................................................................................24200.0511000
.....................................................................................................................TGGTGTAAACGGTGGAACCTAAAAA.........................................................................................................................................25200.0511000
..........ACTCTTATTGCAACCTATGCAGATG....................................................................................................................................................................................................................................................25200.0511000
........................................................................................................................TGTAAACGGTGGAACCTAAAAATAAACC...................................................................................................................................28200.0510100
...................................................................................CGGACTACAAGAATATATTAATGCT...........................................................................................................................................................................25200.0511000
droYak3
CCTACAA--GGCTCTTATGGCAACCTATGCAGATGACATCGCAGTGGTGTATAACTCTGGGGAC--AGCGGAGAGGCAGCGAAAGGACTGCAAGAATACATTAATGCTCTAGCAGCCTGGTGTAAACGGTGGAATCTAAAAATAAATGCAACGAAAACCACAAATCTATGTTTCACATTGAAAACG-CTCATCAAAAAAACACCCCCACT--CCA-------------GCTAGAAGGAGTTACACTAGACCAGCCGCTGCAAGCAACATATCTAGGTATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................TCTGGGGAC--AGCGGAGAGGCAGCGA.....................................................................................................................................................................................................2511.00101000000000
............................GCAGATGACATCGCAGTGGTGT.....................................................................................................................................................................................................................................2290.44402000020000
............................GCAGATGACATCGCAGTGGTGTAT...................................................................................................................................................................................................................................2490.44404000000000
...........................................................................................................................................................................................................................................................AGCCGCTGCAAGCAACATATCTAGGTA.2750.40202000000000
............................GCAGATGACATCGCAGTGGTGTA....................................................................................................................................................................................................................................2390.33302000010000
................................................................................................................................................................................................................................................TACACTAGACCAGCCGCTGCAAGCAAC............2740.25100100000000
........................................................................................................................................................GAAAACCACAAATCTATGTTTCACA......................................................................................................2550.20101000000000
.................................................................................................................................................................AAATCTATGTTTCACATTGAAAACG-............................................................................................2550.20101000000000
.....................................................................................................................TGGTGTAAACGGTGGAATCTAAAAATA.......................................................................................................................................2770.14100010000000
.....................................................................................................................TGGTGTAAACGGTGGAATCTAAAAAT........................................................................................................................................2670.14100000010000
................................................................................................................................GTGGAATCTAAAAATAAATGCAACGA.............................................................................................................................2670.14101000000000
............................GCAGATGACATCGCAGTGGTGTATAAC................................................................................................................................................................................................................................2770.14101000000000
...............................................................................................................................................................................................TCAAAAAAACACCCCCACT--CCA-------------GCTAGAA............................................2970.14101000000000
..TACAA--GGCTCTTATGGCAACCTA............................................................................................................................................................................................................................................................2390.11100100000000
..............................AGATGACATCGCAGTGGTGTA....................................................................................................................................................................................................................................2190.11101000000000
............................GCAGATGACATCGCAGTGGT.......................................................................................................................................................................................................................................2090.11101000000000
................ATGGCAACCTATGCAGATGACATCG..............................................................................................................................................................................................................................................25100.10101000000000
...ACAA--GGCTCTTATGGCAACCTATG..........................................................................................................................................................................................................................................................24100.10101000000000
droEre2
CCACGAA--GGCCCTACTCGCCACTTACGCTGACGATATCGCATTGTTATACAGCTCCAGTTCT--TGCACTGAGGCAGCACGTGGCCTCCAAAAGTATCTCAATACTTTGGCTGCATGGTGCAAAAGATGGAACTTAAAGGTGAATCCACATAAGACCATCAATCCTTGCTTCACCTTGAAGACT-CTCATTAGGCGCACACCACCCAT--ACA-------------ATTTGATGGCGTAACCCTAGAACAACCTCTGCAGGCTAAATACCTCGGGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................TTCT--TGCACTGAGGCAGCACGTGGCC...............................................................................................................................................................................................26205.1510350000098
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAGGC..................................................................................25202.2044160000028
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTAAA...........26201.7034210000013
......................................................................................................................................................................................................CACACCACCCAT--ACA-------------ATTTGATGGCG........................................26201.653300000033
.................................................................................................................................TGGAACTTAAAGGTGAATCCACA...............................................................................................................................23131.311717000000
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAGG...................................................................................24201.052119000002
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAGGCGC................................................................................27200.951919000000
...............................................................................................................................................................................CCTTGAAGACT-CTCATTAGGCG.................................................................................22200.951900000019
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTAA............25200.901818000000
............................................................TTCT--TGCACTGAGGCAGCACGTGG.................................................................................................................................................................................................24200.751540001010
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAGGCGCA...............................................................................28200.701414000000
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTA.............24200.50106000004
.......................................................TCCAGTTCT--TGCACTGAGGCAGCAC.....................................................................................................................................................................................................25200.4088000000
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCT..............23200.4088000000
.......................................................................................................................................................................................ACT-CTCATTAGGCGCACACCACCC.......................................................................24200.3576100000
............................................................TTCT--TGCACTGAGGCAGCACGTGGC................................................................................................................................................................................................25200.3065100000
.............................................................TCT--TGCACTGAGGCAGCACGTGGCC...............................................................................................................................................................................................25200.2555000000
............................................................................................................................................................................TCACCTTGAAGACT-CTCATTAGGCG.................................................................................25200.2555000000
...............................................................................................................................................................................................................................................TAACCCTAGAACAACCTCTGCAGGC...............25200.2044000000
...................................................................................................................................................................................................................................................CCTAGAACAACCTCTGCAGGCTAAA...........25200.2044000000
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAGGA..................................................................................25200.2041000003
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGG................21200.2044000000
.................................................................................................................................TGGAACTTAAAGGTGAATCCACATA.............................................................................................................................25130.1522000000
................................................................................................................................ATGGAACTTAAAGGTGAATCCACA...............................................................................................................................24130.1522000000
.................................................................................................................................TGGAACTTAAAGGTGAATCCACATAT............................................................................................................................26130.1522000000
..........................................................AGTTCT--TGCACTGAGGCAGCACG....................................................................................................................................................................................................23200.1532000100
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTAAT...........26200.1533000000
...............................................................................................................GCTGCATGGTGCAAAAGA......................................................................................................................................................18200.1533000000
..................................................................................................................................................TCCACATAAGACCATCAATCCTTG.............................................................................................................24200.1533000000
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAG....................................................................................23200.1533000000
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTAAAT..........27200.1530000003
.......................................................................................................................................................................................ACT-CTCATTAGGCGCACACCACCCA......................................................................25200.1533000000
.....................CACTTACGCTGACGATATCGCA............................................................................................................................................................................................................................................22200.1530000120
.................................................................................................................................................................................................................T--ACA-------------ATTTGATGGCGTAACCCTAGAAC............................27200.1533000000
..........................................................................................................................................................................................................................................TGGCGTAACCCTAGAACAACCTCTGCA..................27200.1533000000
.................................................................................................................................................................................................................T--ACA-------------ATTTGATGGCGTAACCCTAGAACA...........................28200.1533000000
......................................................................................................AATACTTTGGCTGCATGGTGC............................................................................................................................................................21200.1022000000
............................................................TTCT--TGCACTGAGGCAGCACGTG..................................................................................................................................................................................................23200.1022000000
.................................................TACAGCTCCAGTTCT--TGCACTGAGGC..........................................................................................................................................................................................................26200.1021100000
................................................................................................................................................AATCCACATAAGACCATCAATCCTTG.............................................................................................................26200.1022000000
.......................................................TCCAGTTCT--TGCACTGAGGCAGCACGTG..................................................................................................................................................................................................28200.1022000000
......................................................................................................................................................................................GACT-CTCATTAGGCGCACAC............................................................................20200.1021000010
.......................................................TCCAGTTCT--TGCACTGAGGCAGCACG....................................................................................................................................................................................................26200.1020000200
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTA.....................................................................................22200.1022000000
.............................................................TCT--TGCACTGAGGCAGCACGTGGCCT..............................................................................................................................................................................................26200.1022000000
...............................................................T--TGCACTGAGGCAGCACGTGGC................................................................................................................................................................................................22200.1022000000
...............................................................................................................................................................................................................CAT--ACA-------------ATTTGATGGCGTAAC....................................21200.1021000100
.............................................................TCT--TGCACTGAGGCAGCACGTGG.................................................................................................................................................................................................23200.1022000000
.....................................................................................................................................................................................................................................................TAGAACAACCTCTGCAGGCTAAATACC.......27200.1020200000
............................................................................................................................................................................TCACCTTGAAGACT-CTCATTAGGC..................................................................................24200.1022000000
............................................................................................................TTGGCTGCATGGTGCAAAAGA......................................................................................................................................................21200.1022000000
................................................................................................TATCTCAATACTTTGGCTGCATGG...............................................................................................................................................................24200.1022000000
............................................................................................................................................................................TCACCTTGAAGACT-CTCATTAGGCGCA...............................................................................27200.1022000000
..................................................................................................................................................................................TGAAGACT-CTCATTAGGCGCACACCACC........................................................................28200.1021100000
.......................................................TCCAGTTCT--TGCACTGAGGCAGCA......................................................................................................................................................................................................24200.1022000000
.......................................................................................................................................................................................ACT-CTCATTAGGCGCACACC...........................................................................20200.1021000010
................................................................................................TATCTCAATACTTTGGCTGCATGGT..............................................................................................................................................................25200.1022000000
................................................................................................TATCTCAATACTTTGGCTGCAT.................................................................................................................................................................22200.1022000000
........................................................................................................................................................................................................CACCACCCAT--ACA-------------ATTTGATGGCGTA......................................26200.1020000002
............................................................................................................................................................................TCACCTTGAAGACT-CTCATTAGGCGC................................................................................26200.1022000000
.................................................................................................ATCTCAATACTTTGGCTGCATGGT..............................................................................................................................................................24200.1020010100
..............................................................CT--TGCACTGAGGCAGCACGTGGCCT..............................................................................................................................................................................................25200.1022000000
...........................................................................................................................AAAAGATGGAACTTAAAGGTGA......................................................................................................................................22110.0910000010
.........................................................................................................................GCAAAAGATGGAACTTAAAGGTGAA.....................................................................................................................................25110.0911000000
.................................................................................................................................TGGAACTTAAAGGTGAATCCACATAA............................................................................................................................26130.0811000000
................................................................................................................................ATGGAACTTAAAGGTGAATCCA.................................................................................................................................22130.0810001000
..................................................................................................................................GGAACTTAAAGGTGAATCCACA...............................................................................................................................22130.0811000000
.................................................................................................................................TGGAACTTAAAGGTGAATCCACAT..............................................................................................................................24130.0811000000
.......................................................................................................................................................................................................................................................GAACAACCTCTGCAGGCTAAATACCTCG....28150.0711000000
..........................................................AGTTCT--TGCACTGAGGCAGCACGTGG.................................................................................................................................................................................................26200.0511000000
.......................................................................................................................................................................................ACT-CTCATTAGGCGCACACCAC.........................................................................22200.0511000000
.......................................................................................................................................................................................................ACACCACCCAT--ACA-------------ATTTGATGG..........................................23200.0511000000
........................................................................................................TACTTTGGCTGCATGGTGCAAAAGAT.....................................................................................................................................................26200.0511000000
..........................................................AGTTCT--TGCACTGAGGCAGCACGTGGC................................................................................................................................................................................................27200.0511000000
.....................................................................................................................................................................................................................CA-------------ATTTGATGGCGTAACCC..................................19200.0510000100
..........................................................................................................................CAAAAGATGGAACTTAAAGGG........................................................................................................................................21200.0511000000
......................................................................................................................................................................................................................A-------------ATTTGATGGCGTAACCCTAGAACA...........................25200.0511000000
..............................................................................................................GGCTGCATGGTGCAAAAGA......................................................................................................................................................19200.0511000000
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTAAAC..........27200.0511000000
...........................................................GTTCT--TGCACTGAGGCAGCACGT...................................................................................................................................................................................................23200.0510010000
.........................................................................................................ACTTTGGCTGCATGGTGCAAAAGAT.....................................................................................................................................................25200.0510000100
........................................................................................................................................................................................................CACCACCCAT--ACA-------------ATTTGATGGCG........................................24200.0511000000
..........................................................AGTTCT--TGCACTGAGGCAGCACGTG..................................................................................................................................................................................................25200.0511000000
..................................................................TGCACTGAGGCAGCACGTGGCCA..............................................................................................................................................................................................23200.0511000000
.........................................................................................................................GCAAAAGATGGAACTTAAA...........................................................................................................................................19200.0511000000
.......................................................................................................ATACTTTGGCTGCATGGTGCA...........................................................................................................................................................21200.0510000010
..........................................................................................................................................................................................................................................TGGCGTAACCCTAGAACAACCTCTGC...................26200.0511000000
..................................................................TGCACTGAGGCAGCACGTGGCCTCC............................................................................................................................................................................................25200.0511000000
...........................................................................................................................................................................................................................................GGCGTAACCCTAGAACAACCTCTGCA..................26200.0511000000
................................................................................................................................................................................................................AT--ACA-------------ATTTGATGGCGTAACCCTAG...............................25200.0511000000
....................................................................................................................ATGGTGCAAAAGATGGAACTTAAAGG.........................................................................................................................................26200.0511000000
..............TACTCGCCACTTACGCTGACGATATCGCA............................................................................................................................................................................................................................................29200.0511000000
...............................................................................................................................................................................CCTTGAAGACT-CTCATTAGGC..................................................................................21200.0510000001
....................................................................................................TCAATACTTTGGCTGCATGGTGCAAAAGA......................................................................................................................................................29200.0511000000
........................................................................................................TACTTTGGCTGCATGGTGCAAAA........................................................................................................................................................23200.0511000000
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAGGCGTT...............................................................................28200.0511000000
......................................................................................................................................................................................................CACACCACCCAT--ACA-------------ATTTGATGGCGTA......................................28200.0511000000
..............................................................................................AGTATCTCAATACTTTGGCTGCA..................................................................................................................................................................23200.0511000000
.................................................................................................................................................................................................................................................ACCCTAGAACAACCTCTGCAGGCTAAA...........27200.0511000000
....................................................................CACTGAGGCAGCACGTGGCCT..............................................................................................................................................................................................21200.0510000010
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTC.............24200.0511000000
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAGGCAA................................................................................27200.0511000000
.....................................................................................................................................................................................................................................TTTGATGGCGTAACCCTAGAACAACC........................26200.0511000000
.....................................................................................................................................................................................................................................................TAGAACAACCTCTGCAGGC...............19200.0511000000
..............TACTCGCCACTTACGCTGACGA...................................................................................................................................................................................................................................................22200.0511000000
........................................................................................................................................................................................CT-CTCATTAGGCGCACACC...........................................................................19200.0510010000
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCATTAGGCT.................................................................................26200.0511000000
.......................................................................................................ATACTTTGGCTGCATGGT..............................................................................................................................................................18200.0510000100
...............................................................................................................................................................................................................................................TAACCCTAGAACAACCTCT.....................19200.0511000000
........................................................................................................................................................................................CT-CTCATTAGGCGCACACCACCCA......................................................................24200.0511000000
.....................................................................................................................................................................................................................................TTTGATGGCGTAACCCTAGAACAACCT.......................27200.0511000000
............................................................................................................................................................................................TCATTAGGCGCACACCACC........................................................................19200.0510000100
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAG.................20200.0511000000
....................................................................CACTGAGGCAGCACGTGG.................................................................................................................................................................................................18200.0511000000
.........................................................CAGTTCT--TGCACTGAGGCAGCACGTG..................................................................................................................................................................................................26200.0511000000
.............................................................................................................................................................................CACCTTGAAGACT-CTCATTAGGCGCA...............................................................................26200.0511000000
.........................................................CAGTTCT--TGCACTGAGGCAGCACG....................................................................................................................................................................................................24200.0511000000
......................................................................................................................................................................................................................................TTGATGGCGTAACCCTAGAACAACC........................25200.0511000000
....................................................................................................................................................................................AAGACT-CTCATTAGGCGCACAC............................................................................22200.0510000100
..............................................................................................AGTATCTCAATACTTTGGCTGCATG................................................................................................................................................................25200.0511000000
.............................................................................................................................................................................................................................................CGTAACCCTAGAACAACCTCTG....................22200.0511000000
..............................................................................................................GGCTGCATGGTGCAAAAGAT.....................................................................................................................................................20200.0511000000
.............................................................................................................................................................................................................................................CGTAACCCTAGAACAACCTCTGCA..................24200.0511000000
....................................................................................................................................................................................................................................................CTAGAACAACCTCTGCAGGCTAAA...........24200.0511000000
..........................................................................................................................CAAAAGATGGAACTTAAAGGT........................................................................................................................................21200.0510000100
..................................................................................................TCTCAATACTTTGGCTGCATGGTGCA...........................................................................................................................................................26200.0511000000
...............................................................T--TGCACTGAGGCAGCACGTGGCCT..............................................................................................................................................................................................24200.0511000000
..........................................................................................................CTTTGGCTGCATGGTGCAAAA........................................................................................................................................................21200.0510000010
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTAAC...........26200.0511000000
.................................................................................................................................................................................TTGAAGACT-CTCATTAGGCGC................................................................................21200.0510010000
................................................................................................TATCTCAATACTTTGGCTGCATG................................................................................................................................................................23200.0511000000
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGC...............22200.0510001000
................CTCGCCACTTACGCTGACG....................................................................................................................................................................................................................................................19200.0511000000
...............................................................................................GTATCTCAATACTTTGGCTGC...................................................................................................................................................................21200.0511000000
...........................................................................................................TTTGGCTGCATGGTGCAAAAGA......................................................................................................................................................22200.0511000000
...........................................................................................................................AAAAGATGGAACTTAAAGGT........................................................................................................................................20200.0510000100
.....................................................................................................CAATACTTTGGCTGCATGGTGCAAAAGA......................................................................................................................................................28200.0511000000
..........................................................................................................CTTTGGCTGCATGGTGCAAAAGATGG...................................................................................................................................................26200.0510000100
.......................................................................................................................................................................................................................................................GAACAACCTCTGCAGGCTAAATACC.......25200.0511000000
..................................................................................................................................................................................................................................................CCCTAGAACAACCTCTGCAGGCTAAAA..........27200.0511000000
................................................................................................................................................................................................................................................AACCCTAGAACAACCTCTGCAGGC...............24200.0511000000
....................................................................................................................................................................................................................ACA-------------ATTTGATGGCGTAACCCTAGAACA...........................27200.0511000000
...................................................................GCACTGAGGCAGCACGTGGCCT..............................................................................................................................................................................................22200.0511000000
.......................................................TCCAGTTCT--TGCACTGAGGC..........................................................................................................................................................................................................20200.0511000000
.........................................................................................................ACTTTGGCTGCATGGTGCA...........................................................................................................................................................19200.0510000100
.................................................................................................ATCTCAATACTTTGGCTGCAC.................................................................................................................................................................21200.0511000000
..........................................................................................................................................................................................................................................TGGCGTAACCCTAGAACAACCTCT.....................24200.0511000000
......................................................................................................................................................................................................................................TTGATGGCGTAACCCTAGAACAACCTC......................27200.0511000000
............................................................................................................................................................................TCACCTTGAAGACT-CTCATTAGGCGCAC..............................................................................28200.0511000000
....................................................................................................................................................................................AAGACT-CTCATTAGGCGCACACCACC........................................................................26200.0511000000
..............................................................................................................GGCTGCATGGTGCAAAAG.......................................................................................................................................................18200.0511000000
...........................................................................................................................................................................TTCACCTTGAAGACT-CTCA........................................................................................19200.0510000010
..............................................................CT--TGCACTGAGGCAGCACGTGGC................................................................................................................................................................................................23200.0510100000
.......................................................................................................................................................................................ACT-CTCATTAGGCGCACACCA..........................................................................21200.0511000000
................................................................................................................................................AATCCACATAAGACCATCA....................................................................................................................19200.0510000100
.......................................................................................................................................................................................................................................TGATGGCGTAACCCTAGAACAACCTC......................26200.0511000000
........................................................................................................................................................................................................................................................AACAACCTCTGCAGGCTAAATACCT......25200.0511000000
............................................................................................................................................................................TCACCTTGAAGACT-CTCATTAGG...................................................................................23200.0511000000
...................................................................GCACTGAGGCAGCACGTGGC................................................................................................................................................................................................20200.0510000010
................................................................................................................................................................................................................AT--ACA-------------ATTTGATGGCGTAACCCTAGAAC............................28200.0511000000

Generated: 05/17/2015 at 10:55 PM