ID:

dmo_695

 Coordinate:

scaffold_6473:7207970-7208089 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.7 -15.7 -15.5

Flybase annnotation

exon [dmoj_GLEANR_16359:1]; exon [dmoj_GLEANR_16359:2]; CDS [Dmoj\GI15637-cds]; CDS [Dmoj\GI15637-cds]; intron [Dmoj\GI15637-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
  1. dmo_426  scaffold_6308:1429016-1429039 +
  2. scaffold_6308:1443024-1443047 +
  3. scaffold_6328:1120828-1120851 +
  4. scaffold_6359:3072656-3072679 +
  5. scaffold_6359:4461432-4461455 +
  6. dmo_695  scaffold_6473:7208001-7208024 +
  7. scaffold_6473:14204731-14204754 +
  8. scaffold_6496:4603554-4603577 +
  9. scaffold_6500:6057633-6057656 +
  10. scaffold_6500:24092524-24092547 +
  11. scaffold_6500:24117645-24117668 +
  12. dmo_1873  scaffold_6540:9009671-9009694 +
  13. scaffold_6540:10562042-10562065 +
  14. scaffold_6540:13211191-13211214 +
  15. scaffold_6540:13363412-13363435 +
  16. scaffold_6540:14087526-14087549 +
  17. scaffold_6540:18237920-18237943 +
  18. scaffold_6540:26168273-26168296 +
  19. scaffold_6540:28255915-28255938 +
  20. scaffold_6680:20868391-20868414 +
star
  1. scaffold_6308:1857298-1857320 +
  2. dmo_695  scaffold_6473:7208014-7208036 +
  3. dmo_695  scaffold_6473:7208050-7208072 +
  4. scaffold_6496:5411728-5411750 -
  5. scaffold_6496:13395043-13395065 +
  6. scaffold_6500:900498-900520 -
  7. scaffold_6540:2549868-2549890 -
  8. scaffold_6540:9334999-9335021 -
  9. scaffold_6540:30589377-30589399 -
  10. scaffold_6680:3277409-3277431 -
  11. scaffold_6680:15603819-15603841 +
  12. scaffold_6680:17713016-17713038 +

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------##################################################
TGGCTAGTATCCCTTCAGATGCTGAGGAAGACAAGGTGATTGCACTGGATGTGGATTGGGCTGCCGAACAAGCGGAGCAGCAGCAACAGCAACAGCAGCAGCAACTGCAGCAGCAGCAGCAACTGCAGCAGCAGCAGCAACTGCAGCAGCAGCAATGTGAATCGGAGCAGGACAACGATCTGGAGATGGATCAAGAGTTCGTGCACGAGCAGGAACTGGA
*********************************************************************************................((.((..((((((..((....))..))))))..)).))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M046
female body
 V056
head
 M060
embryo
 V049
head
.............................................................................................................................................................................AACGTTCTGGTGTTGGATC............................ 19 3 13 4.38 57 25 30 1 0 1
............................................................................................................................................................................CAACGATCTGGAGATGGA.............................. 18 0 1 1.00 1 1 0 0 0 0
...CTAGTATCCCTTCAGATGCTGAGGA................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................TGGAGATGGATCAAGAGTTC.................... 20 0 1 1.00 1 1 0 0 0 0
.........................................GCACTGGATGTGGATTGGGCTGCC........................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................TGTGAGTCGGAGCGGGGCAACGA.......................................... 23 3 1 1.00 1 1 0 0 0 0
.............TTCAGATGGAGAGGAAGACA........................................................................................................................................................................................... 20 2 2 1.00 2 1 0 1 0 0
.............................................................................................................................................................................AACGTTCTGGTGTTGGATCA........................... 20 3 3 1.00 3 0 3 0 0 0
........................................................................................................................................................................................GATGGGTGAAGAGTTCATGCAC.............. 22 3 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................GGAGATGGATCAAGAGTTCGTG................. 22 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................GATGGGTGAAGAGTTCATGCA............... 21 3 4 0.75 3 3 0 0 0 0
................................................................................................................................................................................GATCTGAAGATGGAGCAAGA........................ 20 2 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................CTGAAGATGGAGCAAGAG....................... 18 2 20 0.35 7 3 3 1 0 0
..................................................................................................................................................................................GCTGAAGATGGATCAAGAG....................... 19 2 3 0.33 1 1 0 0 0 0
...................................................................................................................................................................................CTGAAGATGGAGCAAGAGAT..................... 20 3 20 0.30 6 3 3 0 0 0
.................................................................................................................................................................................ATCTGAAGATGGAGCAAGA........................ 19 2 4 0.25 1 1 0 0 0 0
........................................................................................................................................................................................GATGGGTGAAGAGTTCATGC................ 20 3 9 0.22 2 2 0 0 0 0
.................................................................................AGCAACAGCAACAGCAGCAGCAAC................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0
............................................................................................................................................................................................GATGAAGAGCTCTTGCACGA............ 20 3 10 0.10 1 0 0 0 1 0
................................................................................................................GCAGCAGCAACTGCAGCAGCAGC..................................................................................... 23 0 13 0.08 1 0 0 0 1 0
..............................................................................................GCAGCAGCAACTGCAGCAGCAGC....................................................................................................... 23 0 13 0.08 1 0 0 0 1 0
..................................................................................................................................GCAGCAGCAACTGCAGCAGCAGC................................................................... 23 0 13 0.08 1 0 0 0 1 0
..............................................................................................................................................................................ACGTTCTGGTGTTGGATCA........................... 19 3 17 0.06 1 0 1 0 0 0
..............................................................................AGCAGCAACAGCAACAGCAGC......................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0
.................................................................................AGCAACAGCAACAGCAGCAGCA..................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0
.................................................................................................................................AGCAGCAGCAACTGCAGCAGC...................................................................... 21 0 20 0.05 1 0 1 0 0 0
...............................................................................................................AGCAGCAGCAACTGCAGCAGC........................................................................................ 21 0 20 0.05 1 0 1 0 0 0
................................................................................CAGCAACAGCAACAGCAGCAGC...................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0
............................................................................GCAGCAGCAACAGCAACAG............................................................................................................................. 19 0 20 0.05 1 0 1 0 0 0
......................................................................................CAGCAACAGCAGCAGCAAC................................................................................................................... 19 0 20 0.05 1 0 0 0 0 1
.............................................................................................AGCAGCAGCAACTGCAGCAGC.......................................................................................................... 21 0 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

ACCGATCATAGGGAAGTCTACGACTCCTTCTGTTCCACTAACGTGACCTACACCTAACCCGACGGCTTGTTCGCCTCGTCGTCGTTGTCGTTGTCGTCGTCGTTGACGTCGTCGTCGTCGTTGACGTCGTCGTCGTCGTTGACGTCGTCGTCGTTACACTTAGCCTCGTCCTGTTGCTAGACCTCTACCTAGTTCTCAAGCACGTGCTCGTCCTTGACCT
*************************************************************************************................((.((..((((((..((....))..))))))..)).))********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V049
head
 V056
head
.............................................................................................................................................................................TTGCAAGACCACAACCTAG............................ 19 3 13 5.62 73 51 17 3 2
.............................................................................................................................................................................TTGCAAGACCACAACCTAGT........................... 20 3 3 2.67 8 6 2 0 0
...................................................................................................................................................................................GACTTCTACCTCGTTCTCTA..................... 20 3 20 1.50 30 30 0 0 0
..............................................................................................................................................................................TGCAAGACCACAACCTAGT........................... 19 3 17 0.29 5 3 2 0 0
..................................................................................................................................................................................CGACTTCTACCTAGTTCTCTA..................... 21 3 7 0.14 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:7207920-7208139 + dmo_695 TGGCTAGTA------------------TCCCTTCAGATGCTGAGG-----------------------------------AAGACAAG---------------------------------------------------GTGATTGCACTGGATGTGGA------TT--------------------------------------------------------GGGCTGC-C------GAACAA------GCGGAG--------C---AGCAGC---AACAGCAACAG---------CA---------------------GCA---------------------------------------------------------------GCAAC---TGCAGCAGCAGCAGC--AACTGC---------------------AGCAGCAGCAGCAA---------------CTGCAGCAGC------------------------AGCAATGTG---------AAT-----------------------------------------------------C-------------GG------------------------A-------------------------------GCAGGACAACGATCTGGAGATGGAT----------CAAGAGT---------------------------------------------------------------TCGTGC------------------------------------A-CGAGCAGGA--ACTGGA--
droVir3 scaffold_12875:7331571-7331799 - CAGCCGCAG------------------CCGCTGCCGCAGCAGGCA-----------------------------------A--------CAATCGGC------------------------------------------CAAATTACA----------------CT-----GA--CGGCGATGTCCAG---------------------------------------TGC----------------------ACAG--------C---AGCAGC---AGCAGCAACAA---------CAGCA---------------------------------------------------------------------------------------AC---AACAGC---AACA----------------------------------------------------------------------GCAACAGCAGCAGCAGCAGCAAC----------------AGCAGCAGCAACAGGTGA-CAAC------------------------------------------TGATGCGAAC---------------------------------------AACAATGCAACAGT---TCAGGATGCGGCGCTGCTGGTCAAA----------CAGCATGCG-------------A---TG--------------------------------------------CAGC------------------------------------A-GATGCAGCT---GAGCA--
droGri2 scaffold_15110:16269676-16269878 + TGACCGGTG------------------GCCCTGG------AGG-----------------------------------------------------------------------------------------------------------------AGG------TGGTGTCTCCGGG----------GGCGGTGGG-----------------------------------------------CAGCAAGCGCAG--------C---AGCAAC---AGCAACAACAA---------CAGCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGTATAG------CAGCAACATCAGCAAATGCAGCAGCAGCAAC----------------------------------------------------------------------------------------------AA--------TAGCAG---CAACAGCAGCAGC----GCAGCAGC--------------------------------A-------------------------A------CAG----------------TGAA------CAGCAGCCT-------------G---AG--------------------------------------------CAGC------------------------------------A-TCAGCAGCACAGCTACA--
droWil2 scf2_1100000004830:122798-122983 - GATGATC---------------------------------AGG-------------------------------------AAGATAAGTCGGATA------------------------------------------------A---------------------------------------------------------------------------------------TAAACGT------CAACAGC---A-----GCAGCAAC---AGC---AGCAACAACAA---------CA------------------------------------------------------------------------------------------GCAGCAGCAACAG--------------CAGCAA---------CAACAACAGCAGCAACAAC-------------------------------------------------------------------------------------------AGCAACAGCAGCA--GCAA---------------------------------------CA---ACAACAAATGAA---TCCA-----------------------------------------------------------------------------------------------------------------------------------AACG---------AACCAAATGCCAAACGTGTTCGTCTCTCCGGTGCAGGC--AATCAA--
dp5 XR_group6:1004150-1004337 + TCCCTGCAC---------------------------ACGC----------------------------------------------------------------------------------------------------------TGCAAGG------------------------------TG--------------------TGCAGGTGAAGAAAGATCCCGATGC-C------CAGCAA------C---AA--CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAGCAACAACA-------------------------------ACAA--------CAGCAG---CA---GCAGCAACC-----GACAAT--------------------------------G-------------------------A------CAG----------------TGACCACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GTGC------------------------------------A-GCAGCAGCA--ACAGCA--
droPer2 scaffold_12:1682900-1683093 + TCCCTGCAC---------------------------ACGC----------------------------------------------------------------------------------------------------------TGCAAGG------------------------------TG--------------------TGCAGGTGAAGAAAGATCCCGATGC-C------CAGCAA------C---AA--CAGC---------AGCAGCAGCAGCAA------------CA---------------------ACA---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAGCAGCAACA-------------------------------ACAA--------CAGCAG---CA---GCAGCAACC-----GACAAT--------------------------------G-------------------------A------CAG----------------TAACCACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GTGC------------------------------------A-GCAGCAGCA--ACAGCA--
droAna3 scaffold_13117:3393178-3393368 + GTTGAGAAT------------------CA------CAAAGAGGAGA-------------------------------------------TGGAGG-------------------------------------------------------------------------TGGA---------------------TC----------------------------AG-------------------GAGCAGGA--------GCAGGAGG---AGC---AGGAACATCAG---------CAGGA---------------GGAGCA-----------------------------------------------------------------------------------------AGAACATCAGCAG------CAACTCCTGATCCA-----------------------------------AC-----------------------------------------------------------AGCAGCAGCAGCA--GCAA---------------------------------------CA---ACAGCAGCTGAA--------------------------------------------------------------------------------------------------------------------------------------------GAAGCAACAACATAGTCGTAGCAATGGTAATCGTTTCAA-GTCGCAGGG--AGTGAA--
droBip1 scf7180000396412:205383-205614 - TTGAGGGCGAGAGTCTCTACGA-------------AGAGGAGG-------------------------------------AAAAAAAG------GAG------------------------------------------GAGACGTCAACGAGT----C---TTCT-----GG--AGATGATATCGAA---------------------------------------ACC----------------------CGAGCC--GGAGACGG---AGC---CAGAACCGGAG---------CAGGA---------------------GC------------------------------------------------------------------------------CAGA----------------------------------------------------------------------GACGGAGCCGAAGCAGCAGCCAG----------------AGCCGGAGCAAGAGCTAG-------AGCCTGAGCCAGA--GCCG---GA----------------------------------------------------------------------------------GCAGGAGACGGAGCCAGAGCCGGAG----------CAGGAGC---------------------------------------------------------------CGAAGC------------------------------------A-GGAGACGGA--GCAGGA--
droKik1 scf7180000302355:250144-250348 + CAGATG---------------------CC------TGAGCGGGAGACTAAGGTGAATTTGGCACAGGCCATAGTCCAGAA-----------------------------------------------------------------------------------------------------------------ACAG-----------------------------------------------CAGCAGC---AA-----C---------------AGCAGCAGCAG---------CAGCA---------------ACAACA---------------------------------------------------------------ACAGC---TG---------CAGC--AGCAACAGCAT---------CAACTTCAGCAGCAGCAAC----------------------------------------------------------------------------------------------AG--------CAACTG---CAGCAGC---AATCGGCGCTTGAGCAAC---------------------------------------AGCACTATATGT----------------------------------------A----CG----------------CACTT--------------------------------------------CAAC------------------------------------A-GCAACAGCA--GCAGCAGG
droFic1 scf7180000453872:282206-282409 + AGGAGGATG------------------CC-GTCG---AGGAGGAGG----------------------------------AGGAGGAG---------------------------------------------------GAGGAGGAAC--------------------------------------------------------------------------AG-------------------ACCCTGGA--------GGAGCCAG---CA-----------------------------------------------------ACC--AGCGAGCAGACGCCACAGCAGCAACCAC--A------------------------GCAGC---AGCAGCAG-----------CAACTT---------------------AAACA--------------------------------------G----------------CAGC------------TGCAGATGCAGCAAGCCA-AATC------------------------------------------CGTGAGCCAC---------------------------------------AGCAGCAAGCCGACGCA------CAA----------------TGGCCACCAC-C------------------------------------------------------------------------GA------------------------------------G-CGAACAGCA--GCGGCA--
droEle1 scf7180000491044:933658-933875 - CAGGCCGCC------------------TCGCTGCCCATGCAGAAG-----------------------------------A--------TGATGAGC-------------------------------------------------------------------------GA---------------------AC----------------------------TG-------------------AAGCTGCA--------GGAGCCGG---CGC---AGGCGCAGCAC---------CTCAT---------------------GCAACAGATGCAAGCGGCGGCCATGTCGGCGGCCATGCAGCAGCAGCAACAGCAACAGCAGCAGCAGG------------------------------------------------------------------------------------------------------------------------------------------------------CGCATCAGCAGCA--CCAGGCGCATCAGC---ATTTG---GCCGCCCAGC-------------------------------------------------------------------------------AG----------CAACATC---------------------------------------------------------------TCGTCC------------------------------------A-GCAGCAGCA--GCAGCA--
droRho1 scf7180000779776:33292-33500 - CTCCAGCTG------------------CC------G----------------------------------------------------------------------------------------------AAGGAGCAGCAGTTCC-----------------------------------------------------------TGCACCTGAAGGAGGAGCGG-CTCCAGCAGCGC------AAGGAGC---AG-----C---------AGC---------TC------------CAGCA---------GCTGAAGGAGCA------------------------------------------------------------------GCAACTCCAGCAGCTGAAGG--AGCAGCAG---------------------CACCAGCAGCCG---------------AAGGAGCAGC------------------------AGCTCCGGT---------AGT-----------------------------------------------------C----------GAAGG------------------------A-------------------------------GCAGCAGCT------CCAG----------------CCGCTGAAG-------------G---AG--------------------------------------------CAGC-------------------AAA--------------T-CCTGCAGCT--GAGGGA--
droBia1 scf7180000301754:1196583-1196756 - GACTAAA--------------------------------------------GTGAATTTGGCACAGGCCATCGTCCAAAA-----------------------------------------------------------------------------------------------------------------GC-----------------------------------------------------------AG--------C---AGCAGC---AGCAACAACAA---------CAGCA---------------------------------------------------------------------------------------AC---TTCAGCAGCAGCAGC--AACAACAG---------------------CAACA----------------------------------------------------------------------------------------------GCTTATTCAACAGCA--GCAG---------------------------------------CTTGAGCAGCAAAACTATTA----------------------------------CAC------TTACATGCAA----------CAGCAGC---------------------------------------------------------------AGGAGA------------------------------------A-CCAGCAGCA--ACAGCA--
droTak1 scf7180000415313:160875-161065 - CAGATG---------------------CC------GGAGCGCGAGACCAAGGTGAATTTGGCACAGGCCATCGTCCAAAA-----------------------------------------------------------------------------------------------------------------GCAG-----------------------------------------------CAGCAGC---AG-----C---------AGCAGCAGCAGCAGC---------------A---------------ACAGCA------------------------------------------------------------------GCAACTTCAGCAGCAG--------------------------CAACTTCAGCAGCAACA----------------------------------------------------------------------------------------------ACAA--------CAGCAG---CA---GCAACAGC------TTATTCAACAGCAACAGCTGGAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------AACT------------------------------------A-CTATACGTA--CATGCA--
droEug1 scf7180000409886:214590-214817 + CAGCGACTG------------------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGCA--------GCAGCAGC---AGC---AGCAACAGCAA---------CAGCA---------------------GCAACATGCCCATGCAGCAGCAGCAGTTGCTGCC---------------------------------------CAGCAGCAGCAGC--AACTCG---------------------CCCAGCA--------------------------------GCAACAC----------------CCGCAACAGCAGCAACAGCAGCAGCAGCAGGCCAACATC------------------------------------------AGTTGC-----------------------------------------------------------------------------------------------A----AG----------------TACGCCAATGATCCTGTGACGCCGGGCGGAAGTGGGGTGGGGGTGTTCCTGGC------------------------------------A-GCAGCAACA--ACAACA--
dm3 chrX:10854707-10854906 + CGCCTGGAA------------------TCCCGCC-------------------------------------------------------------------------------------------AGGCGCACGCCCAGCGCAACGAGCACGGCGTGGA------TGGCGGATCACGA----------CAGAATGAG-----------------------------------------------CAGCTGCA--------GCAGTCGG---AAC---TGCATCATCAC---------CTGCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--AGCAGCAG---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAG---------------------------------------CAACAGCAGCAGTTGGAGGACGCT-----------------------------------------------------------------------------------------------------------------------------------ATGG------------------------------------A-GGAGCAGCA--CATGGC--
droSim2 x:10312238-10312452 + CGCCTGGAA------------------TCCCGCC-------------------------------------------------------------------------------------------AGGCGCACGCCCAGCGCAACGAGCACGGCGTGGA------TGGCGGATCACGG----------CAGAATGAG-----------------------------------------------CAGCTCCA--------GCAGTCGG---AAC---TGCATCACCAC---------CTGCA---------------------------------------------------------------------------------------GC------------AACAGC--AGCAACAG---------------------CAACA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAA---------------------------------------CAACAGCAGCAGTTGGAGGACGCTCTGGAGGAGCACCAGATGG----------------------------------------C----CG---------------------------------------------------------------CCGATC------------------------------------A-CCAGCAGCA--GCAGCA--
droSec2 scaffold_0:6907006-6907225 + GAGGACGAG------------------A----------------------------------------------------TGGCTATACTGGACACCAAACTGGATCACTGGGCCACCAACAACCTGCCGCTGGACAAGTA----------------------------------CAG----------CA---------------AGCTGCTCAGCAACAAGGGC-TTGAAGAAGCGT------GAGCAGC---AG-----C---------------------------------------AGCAACAGCAGCAGCAACAACA------------------------------------------------------------------GCAGCAACAGCAGCAGAA---TGG------CAATGG---------------AA---------------------------------------------------------------------------------------------------------------------------TCGGC---AGTTA---TGCGAGCAGC-------------------------------------------------------------------------------AG----------CAGTAGC---------------------------------------------------------------TCCTCC------------------------------------A-CTGGCAGCA--GCAGCA--
droYak3 X:11269366-11269580 - CGCCTGGAA------------------TCCCGCC-------------------------------------------------------------------------------------------AGGCGCACGCCCAGCGCACCGAGCACGGCGTGGA------TGGAGGATCACGG----------CAGAGTGAG-----------------------------------------------CAGCTGCA--------GCAGTCGG---AGC---TGCATCACCAC---------CTGCA---------------------------------------------------------------------------------------GC------------AACAGC--AACAGCAG---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAG---------------------------------------CA---GCAGCAGCTGGAGGACGCCATTGAGGATCACCAGATGG----------------------------------------CAACGG--------------------AT--------------------------------------------CACC------------------------------------A-TCAGCAGCA--GCAGCA--
droEre2 scaffold_4784:16989799-16990045 - TGGCTCCGC-CACCACCTCCAAAAATGTC------G-----------------------------------------------------------------------------------------------------------------------AAGAAGA-AGC-----AA--CGTCAAGGTCTGGA----GCAGCAGCAGCATG----------------AG---GC-T------CA---------------G--------C---AGCAAC---------CAAATCAACAACGCCAGCA---------GCA---ACAGCA---------------------------------------------------------------ACGTC---TGCAGCAGCAAAATC--AAAACCAG---------------------CACCAACGC---TTGCAGCAACAACCGAA--------GCAACAG----------------CAGCAACGTCT---------AC--------------A-----ACAG--------CAGCAT------CAGC---AGCAG---CGTGTGCCAC-------------------------------------------------------------------------------AG----------CAACGTA---------------------------------------------------------------TGCAAC------------------------------------A-ACAGCAGCA--TCAGCA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGGCTAGTA------------------TCCCTTCAGATGCTGAGG-----------------------------------AAGACAAG---------------------------------------------------GTGATTGCACTGGATGTGGA------TT--------------------------------------------------------GGGCTGC-C------GAACAA------GCGGAG--------C---AGCAGC---AACAGCAACAG---------CA---------------------GCA---------------------------------------------------------------GCAAC---TGCAGCAGCAGCAGC--AACTGC---------------------AGCAGCAGCAGCAA---------------CTGCAGCAGC------------------------AGCAATGTG---------AAT-----------------------------------------------------C-------------GG------------------------A-------------------------------GCAGGACAACGATCTGGAGATGGAT----------CAAGAGT---------------------------------------------------------------TCGTGC------------------------------------A-CGAGCAGGA--ACTGGA--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGATCTGGAGATGGA................................................................................................................................................1811.001000001
...CTAGTA------------------TCCCTTCAGATGCTGAGG-----------------------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGATGGAT----------CAAGAGT---------------------------------------------------------------TC.............................................................2011.001000001
.................................................................................................................................................GCACTGGATGTGGA------TT--------------------------------------------------------GGGCTGC-C------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATGGAT----------CAAGAGT---------------------------------------------------------------TCGTG..........................................................2211.001000001
...............................................................................................................................................................................................................................................................................AGC---AACAGCAACAG---------CA---------------------GCA---------------------------------------------------------------GCAAC---.....................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
.................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC--AACTGC---------------------AGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................23130.081000010
...............................................................................................................................................................................................................................................................................................G---------CA---------------------GCA---------------------------------------------------------------GCAAC---TGCAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................23130.081000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAA---------------CTGCAGCAGC------------------------AGC.......................................................................................................................................................................................................................................................................................................................23130.081000010
............................................................................................................................................................................................................................................................................AGCAGC---AACAGCAACAG---------CA---------------------GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
...............................................................................................................................................................................................................................................................................AGC---AACAGCAACAG---------CA---------------------GCA---------------------------------------------------------------GCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAA---------------CTGCAGCAGC------------------------..........................................................................................................................................................................................................................................................................................................................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC--AACTGC---------------------AGCAGC...................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
..............................................................................................................................................................................................................................................................................CAGC---AACAGCAACAG---------CA---------------------GCA---------------------------------------------------------------GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...............................................................................................................................................................................................................................................................G--------C---AGCAGC---AACAGCAACAG---------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
.......................................................................................................................................................................................................................................................................................CAGCAACAG---------CA---------------------GCA---------------------------------------------------------------GCAAC---.....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
..............................................................................................................................................................................................................................................................................................AG---------CA---------------------GCA---------------------------------------------------------------GCAAC---TGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droVir3
CAGCCGCAG------------------CCGCTGCCGCAGCAGGCA-----------------------------------A--------CAATCGGC------------------------------------------CAAATTACA----------------CT-----GA--CGGCGATGTCCAG---------------------------------------TGC----------------------ACAG--------C---AGCAGC---AGCAGCAACAA---------CAGCA---------------------------------------------------------------------------------------AC---AACAGC---AACA----------------------------------------------------------------------GCAACAGCAGCAGCAGCAGCAAC----------------AGCAGCAGCAACAGGTGA-CAAC------------------------------------------TGATGCGAAC---------------------------------------AACAATGCAACAGT---TCAGGATGCGGCGCTGCTGGTCAAA----------CAGCATGCG-------------A---TG--------------------------------------------CAGC------------------------------------A-GATGCAGCT---GAGCA--SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................AG---------------------------------------TGC----------------------ACAG--------C---AGCAGC---AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGCAAC----------------AGCAGC.....................................................................................................................................................................................................................................................................................................28200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GC---AGCAGCAACAA---------CAGCA---------------------------------------------------------------------------------------AC---A....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102001000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AC---AACAGC---AACA----------------------------------------------------------------------GCAACAGCA.........................................................................................................................................................................................................................................................................................................................................21200.102000000000000001000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TGC----------------------ACAG--------C---AGCAGC---AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ACA----------------------------------------------------------------------GCAACAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................C---AACAGC---AACA----------------------------------------------------------------------GCAACAGCAGCA......................................................................................................................................................................................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AACA----------------------------------------------------------------------GCAACAGCAGCAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................24200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCAGCAAC----------------AGC........................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCAGC---AGCAGCAACAA---------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------AC---AACAGC---AACA----------------------------------------------------------------------GCAACA............................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CAGC---AACA----------------------------------------------------------------------GCAACAGCAGCA......................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGCAAC----------------A..........................................................................................................................................................................................................................................................................................................23200.051000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCAAC----------------AGCAGC.....................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000000001
droGri2
TGACCGGTG------------------GCCCTGG------AGG-----------------------------------------------------------------------------------------------------------------AGG------TGGTGTCTCCGGG----------GGCGGTGGG-----------------------------------------------CAGCAAGCGCAG--------C---AGCAAC---AGCAACAACAA---------CAGCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGTATAG------CAGCAACATCAGCAAATGCAGCAGCAGCAAC----------------------------------------------------------------------------------------------AA--------TAGCAG---CAACAGCAGCAGC----GCAGCAGC--------------------------------A-------------------------A------CAG----------------TGAA------CAGCAGCCT-------------G---AG--------------------------------------------CAGC------------------------------------A-TCAGCAGCACAGCTACA--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................AACAA---------CAGCA---------------------------------------------------------------------------------------GCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
............................................................................................................................................................................................................................................................GCAG--------C---AGCAAC---AGCAACAACAA---------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05110
................................................................................................................................................................................................................................................................................AC---AGCAACAACAA---------CAGCA---------------------------------------------------------------------------------------GCAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05110
........................................................................................................................................................................................................................................................................C---AGCAAC---AGCAACAACAA---------CAGCA---------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05110
............................................................................................................................................................................................................................................................................................ACAA---------CAGCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CA........................................................................................................................................................................................................................................................................................................................................................................................................................24200.05110
droWil2
GATGATC---------------------------------AGG-------------------------------------AAGATAAGTCGGATA------------------------------------------------A---------------------------------------------------------------------------------------TAAACGT------CAACAGC---A-----GCAGCAAC---AGC---AGCAACAACAA---------CA------------------------------------------------------------------------------------------GCAGCAGCAACAG--------------CAGCAA---------CAACAACAGCAGCAACAAC-------------------------------------------------------------------------------------------AGCAACAGCAGCA--GCAA---------------------------------------CA---ACAACAAATGAA---TCCA-----------------------------------------------------------------------------------------------------------------------------------AACG---------AACCAAATGCCAAACGTGTTCGTCTCTCCGGTGCAGGC--AATCAA--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTCCGGTGCAGGC--AAT.....2011.00101000
......C---------------------------------AGG-------------------------------------AAGATAAGTCGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...................................................................................ATAAGTCGGATA------------------------------------------------A---------------------------------------------------------------------------------------TAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAAC-------------------------------------------------------------------------------------------AGCAACAGC.........................................................................................................................................................................................................................................................................2370.14100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------CAACAACAGCAGCAACAAC-------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................................................................23200.10200020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-------------------------------------------------------------------------------------------AGCAACAGCAGCA--GCAA---------------------------------------CA---ACA................................................................................................................................................................................................................24200.10200020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA--GCAA---------------------------------------CA---ACAACAA............................................................................................................................................................................................................20200.05100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCA--GCAA---------------------------------------CA---...................................................................................................................................................................................................................19200.05100001
............................................................................................................................................................................................................................................................................................................................................................................................................CAACAG--------------CAGCAA---------CAACAACAGC......................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
........................................................................................................................................................................................................................................................................CAAC---AGC---AGCAACAACAA---------CA------------------------------------------------------------------------------------------GC........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
........................................................................................................................................................................................................................................................................CAAC---AGC---AGCAACAACAA---------CA------------------------------------------------------------------------------------------GCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................CAACAG--------------CAGCAA---------CAACAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................ACAACAA---------CA------------------------------------------------------------------------------------------GCAGCAGCAACAG--------------...............................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC-------------------------------------------------------------------------------------------AGCAACAGCAGCA--GCAA---------------------------------------CA---...................................................................................................................................................................................................................25200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC-------------------------------------------------------------------------------------------AGCAACAGCAGCA--GC.................................................................................................................................................................................................................................................................21200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAACAAC-------------------------------------------------------------------------------------------AGC...............................................................................................................................................................................................................................................................................21200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAC-------------------------------------------------------------------------------------------AGCAACAGCAGCA--GC.................................................................................................................................................................................................................................................................23200.05100100
...........................................................................................................................................................................................................................................................................................AACAA---------CA------------------------------------------------------------------------------------------GCAGCAGCAACAG--------------CA.............................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
dp5
TCCCTGCAC---------------------------ACGC----------------------------------------------------------------------------------------------------------TGCAAGG------------------------------TG--------------------TGCAGGTGAAGAAAGATCCCGATGC-C------CAGCAA------C---AA--CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAGCAACAACA-------------------------------ACAA--------CAGCAG---CA---GCAGCAACC-----GACAAT--------------------------------G-------------------------A------CAG----------------TGACCACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GTGC------------------------------------A-GCAGCAGCA--ACAGCA--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---CA---GCAGCAACC-----GACAAT--------------------------------G-------------------------.........................................................................................................................................................................2411.0010001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----TCGTCGGGAGGACAA--------------------------------------------------GTGC------------------------------------A-GCAGCA.............2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-------------------------------ACAA--------CAGCAG---CA---GCAGCAACC-----GACA.....................................................................................................................................................................................................................................2811.0010100000000
......................................................................................................................................................AGG------------------------------TG--------------------TGCAGGTGAAGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGACAA--------------------------------------------------GTGC------------------------------------A-GCAGC..............1911.0010100000000
..................................................................................................................................................TGCAAGG------------------------------TG--------------------TGCAGGTGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----TCGTCGGGAGGACAA--------------------------------------------------GTGC------------------------------------A-...................2111.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CA---GCAGCAACC-----GAC......................................................................................................................................................................................................................................1930.3310001000000
........................................................................................................................................................................................................................................................................................AACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------GC................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------ACAA--------CAGCAG---CA---GCAGC..................................................................................................................................................................................................................................................21200.1530210000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------CAGCAACAACA-------------------------------ACAA--------CAGCA................................................................................................................................................................................................................................................................22200.1530300000000
.........................................................................................................................................................................................................................................................................................ACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530300000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA-------------------------------ACAA--------CAGCAG---CA---GC.....................................................................................................................................................................................................................................................20200.1530300000000
...............................................................................................................................................................................................................................................................................AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530300000000
............................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAGCAACAAC.................................................................................................................................................................................................................................................................................................................2880.1310001000000
...............................................................................................................................................................................................................................................................A--CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CAACA----------------------------------------------------------------------GCAACAG----------------CAGCAACAACA-------------------------------ACA..............................................................................................................................................................................................................................................................................2690.1110100000000
..................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------GC................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAGCAACAAC.................................................................................................................................................................................................................................................................................................................26100.1010100000000
..........................................................................................................................................................................................................................................................................................CAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................23200.1020100100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-------------------------------ACAA--------CAGCAG---CA---GCAGC..................................................................................................................................................................................................................................................22200.1020000200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACA-------------------------------ACAA--------CAGCAG---CA---GC.....................................................................................................................................................................................................................................................24200.1020110000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------CAGCAACAACA-------------------------------ACAA--------CAGC.................................................................................................................................................................................................................................................................20200.1020200000000
................................................................................................................................................................................................................................................................................GC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-------------------------------ACAA--------CAGCAG---CA---GC.....................................................................................................................................................................................................................................................19200.1020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................C---AGCAGCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAGCAAC....................................................................................................................................................................................................................................................................................................................28170.0610010000000
.......................................................................................................................................................................................................................................................................................CAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA-------------------------------ACAA--------CAGCAG---CA---GCAG...................................................................................................................................................................................................................................................24200.0510100000000
...................................................................................................................................................................................................................................................................AGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---A....................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------CAGCAACAACA-------------------------------ACAA--------CAGC.................................................................................................................................................................................................................................................................21200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------CAGCAACAACA-------------------------------ACAA--------CAGCA................................................................................................................................................................................................................................................................21200.0510010000000
.....................................................................................................................................................................................................................................................................................AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
.............................................................................................................................................................................................................................................................................................C------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------G.................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...............................................................................................................................................................................................................................................AGCAA------C---AA--CAGC---------AGC---AGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA-------------------------------ACAA--------CAGCAG---CA---GCAG...................................................................................................................................................................................................................................................23200.0510100000000
.....................................................................................................................................................................................................................................................................C---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010000000
................................................................................................................................................................................................................................................GCAA------C---AA--CAGC---------AGC---AGCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
...............................................................................................................................................................................................................................................................A--CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
..........................................................................................................................................................................................................................................................C---AA--CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------ACAA--------CAGCAG---CA---GCAGCAAC...............................................................................................................................................................................................................................................21200.0510010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACA-------------------------------ACAA--------CAGCAG---C...........................................................................................................................................................................................................................................................20200.0510100000000
.................................................................................................................................................................................................................................................CAA------C---AA--CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010000000
............................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAG........................................................................................................................................................................................................................................................................................................................21200.0510100000000
.....................................................................................................................................................................................................................................................................................AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------ACAA--------CAGCAG---CA---GCAG...................................................................................................................................................................................................................................................20200.0510000100000
...................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AGCAGCAGCAACA----------------------------------------------------------------------GCAAC.............................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CAACA----------------------------------------------------------------------GCAACAG----------------CAGCAAC....................................................................................................................................................................................................................................................................................................................19200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACA-------------------------------ACAA--------CAGCAG---CA---GCAGT..................................................................................................................................................................................................................................................26200.0510100000000
...............................................................................................................................................................................................................................................................A--CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000000
..............................................................................................................................................................................................................................................................AA--CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
..................................................................................................................................................................................................................................................................CAGC---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010000000
............................................................................................................................................................................................................................................................................................AC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
................................................................................................................................................................................................................................................................................GC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------CAGCAACAACA-------------------------------ACAA--------CAGCAG---CA---.......................................................................................................................................................................................................................................................26200.0510010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-------------------------------ACAA--------CAGCAG---CA---GCAGCAAC...............................................................................................................................................................................................................................................25200.0510000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA-------------------------------ACAA--------CAGCAG---CA---GCA....................................................................................................................................................................................................................................................23200.0510010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAGC.......................................................................................................................................................................................................................................................................................................................21200.0510100000000
..............................................................................................................................................................................................................................................CAGCAA------C---AA--CAGC---------AGC---AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
.......................................................................................................................................................................................................................................................................................CAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.....................................................................................................................................................................................................................................................................C---------AGC---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000100
.................................................................................................................................................................................................................................................................................C---AGCAACAAC------------------------------------A---------------------------------------------------------------ACAAC---AGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AACA----------------------------------------------------------------------GCAACAG----------------CAGCAACA...................................................................................................................................................................................................................................................................................................................19200.0510000100000
droPer2
TCCCTGCAC---------------------------ACGC----------------------------------------------------------------------------------------------------------TGCAAGG------------------------------TG--------------------TGCAGGTGAAGAAAGATCCCGATGC-C------CAGCAA------C---AA--CAGC---------AGCAGCAGCAGCAA------------CA---------------------ACA---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------GCAACAG----------------CAGCAGCAACA-------------------------------ACAA--------CAGCAG---CA---GCAGCAACC-----GACAAT--------------------------------G-------------------------A------CAG----------------TAACCACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GTGC------------------------------------A-GCAGCAGCA--ACAGCA--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACCAC-C-----TCGTCGGGAGGAC.................................................................................................................2314.004400000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GT...........................................................2513.003300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GT...........................................................2712.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGGAGGACAA--------------------------------------------------GTGC------------------------------------A-GC.................2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GG...........................................................2711.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--------------------------------G-------------------------A------CAG----------------TAACCACCAC-C-----TCGTCGGGA.....................................................................................................................2811.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GTG..........................................................2511.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAC-C-----TCGTCGGGAGGACAA--------------------------------------------------GC...........................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................AAC---AGCAGCAGCAACA----------------------------------------------------------------------GCA...............................................................................................................................................................................................................................................................................................................................................19200.102002000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAG----------------CAGCAGCAACA-------------------------------ACAA--------CAGC.................................................................................................................................................................................................................................................................26110.091010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA-------------------------------ACAA--------CAGCAG---CA---GCAGCA.................................................................................................................................................................................................................................................28190.051001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA-------------------------------ACAA--------CAGCAG---CA---GC.....................................................................................................................................................................................................................................................21200.051001000
...............................................................................................................................................................................................................................................................A--CAGC---------AGCAGCAGCAGCAA------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
................................................................................................................................................................................................................................................GCAA------C---AA--CAGC---------AGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
....................................................................................................................................................................................................................................................................................CAGCAGCAA------------CA---------------------ACA---------------------------------------------------------------ACAAC---AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
....................................................................................................................................................................................................................................................................................CAGCAGCAA------------CA---------------------ACA---------------------------------------------------------------ACAAC---AG...................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
.................................................................................................................................................................................................................................................................................CAGCAGCAGCAA------------CA---------------------ACA---------------------------------------------------------------ACAAC---AGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
................................................................................................................................................................................................................................................................................................................................ACA---------------------------------------------------------------ACAAC---AGCAGCAGCAACA----------------------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................21200.051010000
...........................................................................................................................................................................................................................................................................................AA------------CA---------------------ACA---------------------------------------------------------------ACAAC---AGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
.........................................................................................................................................................................................................................................................................................GCAA------------CA---------------------ACA---------------------------------------------------------------ACAAC---AGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
................................................................................................................................................................................................................................................GCAA------C---AA--CAGC---------AGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACA----------------------------------------------------------------------GCAACAG----------------C..........................................................................................................................................................................................................................................................................................................................21200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------ACAA--------CAGCAG---CA---GCAGCA.................................................................................................................................................................................................................................................22200.051000100
droAna3
GTTGAGAAT------------------CA------CAAAGAGGAGA-------------------------------------------TGGAGG-------------------------------------------------------------------------TGGA---------------------TC----------------------------AG-------------------GAGCAGGA--------GCAGGAGG---AGC---AGGAACATCAG---------CAGGA---------------GGAGCA-----------------------------------------------------------------------------------------AGAACATCAGCAG------CAACTCCTGATCCA-----------------------------------AC-----------------------------------------------------------AGCAGCAGCAGCA--GCAA---------------------------------------CA---ACAGCAGCTGAA--------------------------------------------------------------------------------------------------------------------------------------------GAAGCAACAACATAGTCGTAGCAATGGTAATCGTTTCAA-GTCGCAGGG--AGTGAA--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................AACATCAG---------CAGGA---------------GGAGCA-----------------------------------------------------------------------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--------------------------------------------------------------------------------------------------------------------------------------------GAAGCAACAACATAGTCGTAGC.....................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA--GCAA---------------------------------------CA---ACAGCAGC...........................................................................................................................................................................................................22200.102020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA--GCAA---------------------------------------CA---ACAGCA.............................................................................................................................................................................................................22200.102020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------------AC-----------------------------------------------------------AGCAGCAGCAGCA--GCA................................................................................................................................................................................................................................................................20200.102002000
...............................................................................................................................................................................................................................AG-------------------GAGCAGGA--------GCAGGAGG---A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------AC-----------------------------------------------------------AGCAGCAGCAGCA--GCAA---------------------------------------CA---...................................................................................................................................................................................................................22200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA--GCAA---------------------------------------CA---ACAGC..............................................................................................................................................................................................................20200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------------------------------------------AGCAGCAGCAGCA--GCAA---------------------------------------CA---ACAGC..............................................................................................................................................................................................................25200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCA--GCAA---------------------------------------CA---ACAGCAGC...........................................................................................................................................................................................................26200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCA--GCAA---------------------------------------CA---ACAGC..............................................................................................................................................................................................................23200.051010000
droBip1
TTGAGGGCGAGAGTCTCTACGA-------------AGAGGAGG-------------------------------------AAAAAAAG------GAG------------------------------------------GAGACGTCAACGAGT----C---TTCT-----GG--AGATGATATCGAA---------------------------------------ACC----------------------CGAGCC--GGAGACGG---AGC---CAGAACCGGAG---------CAGGA---------------------GC------------------------------------------------------------------------------CAGA----------------------------------------------------------------------GACGGAGCCGAAGCAGCAGCCAG----------------AGCCGGAGCAAGAGCTAG-------AGCCTGAGCCAGA--GCCG---GA----------------------------------------------------------------------------------GCAGGAGACGGAGCCAGAGCCGGAG----------CAGGAGC---------------------------------------------------------------CGAAGC------------------------------------A-GGAGACGGA--GCAGGA--SizeHit CountTotal NormTotal
No Reads
droKik1
CAGATG---------------------CC------TGAGCGGGAGACTAAGGTGAATTTGGCACAGGCCATAGTCCAGAA-----------------------------------------------------------------------------------------------------------------ACAG-----------------------------------------------CAGCAGC---AA-----C---------------AGCAGCAGCAG---------CAGCA---------------ACAACA---------------------------------------------------------------ACAGC---TG---------CAGC--AGCAACAGCAT---------CAACTTCAGCAGCAGCAAC----------------------------------------------------------------------------------------------AG--------CAACTG---CAGCAGC---AATCGGCGCTTGAGCAAC---------------------------------------AGCACTATATGT----------------------------------------A----CG----------------CACTT--------------------------------------------CAAC------------------------------------A-GCAACAGCA--GCAGCAGGSizeHit CountTotal NormTotal
No Reads
droFic1
AGGAGGATG------------------CC-GTCG---AGGAGGAGG----------------------------------AGGAGGAG---------------------------------------------------GAGGAGGAAC--------------------------------------------------------------------------AG-------------------ACCCTGGA--------GGAGCCAG---CA-----------------------------------------------------ACC--AGCGAGCAGACGCCACAGCAGCAACCAC--A------------------------GCAGC---AGCAGCAG-----------CAACTT---------------------AAACA--------------------------------------G----------------CAGC------------TGCAGATGCAGCAAGCCA-AATC------------------------------------------CGTGAGCCAC---------------------------------------AGCAGCAAGCCGACGCA------CAA----------------TGGCCACCAC-C------------------------------------------------------------------------GA------------------------------------G-CGAACAGCA--GCGGCA--SizeHit CountTotal NormTotal
No Reads
droEle1
CAGGCCGCC------------------TCGCTGCCCATGCAGAAG-----------------------------------A--------TGATGAGC-------------------------------------------------------------------------GA---------------------AC----------------------------TG-------------------AAGCTGCA--------GGAGCCGG---CGC---AGGCGCAGCAC---------CTCAT---------------------GCAACAGATGCAAGCGGCGGCCATGTCGGCGGCCATGCAGCAGCAGCAACAGCAACAGCAGCAGCAGG------------------------------------------------------------------------------------------------------------------------------------------------------CGCATCAGCAGCA--CCAGGCGCATCAGC---ATTTG---GCCGCCCAGC-------------------------------------------------------------------------------AG----------CAACATC---------------------------------------------------------------TCGTCC------------------------------------A-GCAGCAGCA--GCAGCA--SizeHit CountTotal NormTotal
No Reads
droRho1
CTCCAGCTG------------------CC------G----------------------------------------------------------------------------------------------AAGGAGCAGCAGTTCC-----------------------------------------------------------TGCACCTGAAGGAGGAGCGG-CTCCAGCAGCGC------AAGGAGC---AG-----C---------AGC---------TC------------CAGCA---------GCTGAAGGAGCA------------------------------------------------------------------GCAACTCCAGCAGCTGAAGG--AGCAGCAG---------------------CACCAGCAGCCG---------------AAGGAGCAGC------------------------AGCTCCGGT---------AGT-----------------------------------------------------C----------GAAGG------------------------A-------------------------------GCAGCAGCT------CCAG----------------CCGCTGAAG-------------G---AG--------------------------------------------CAGC-------------------AAA--------------T-CCTGCAGCT--GAGGGA--SizeHit CountTotal NormTotal
No Reads
droBia1
GACTAAA--------------------------------------------GTGAATTTGGCACAGGCCATCGTCCAAAA-----------------------------------------------------------------------------------------------------------------GC-----------------------------------------------------------AG--------C---AGCAGC---AGCAACAACAA---------CAGCA---------------------------------------------------------------------------------------AC---TTCAGCAGCAGCAGC--AACAACAG---------------------CAACA----------------------------------------------------------------------------------------------GCTTATTCAACAGCA--GCAG---------------------------------------CTTGAGCAGCAAAACTATTA----------------------------------CAC------TTACATGCAA----------CAGCAGC---------------------------------------------------------------AGGAGA------------------------------------A-CCAGCAGCA--ACAGCA--SizeHit CountTotal NormTotal
No Reads
droTak1
CAGATG---------------------CC------GGAGCGCGAGACCAAGGTGAATTTGGCACAGGCCATCGTCCAAAA-----------------------------------------------------------------------------------------------------------------GCAG-----------------------------------------------CAGCAGC---AG-----C---------AGCAGCAGCAGCAGC---------------A---------------ACAGCA------------------------------------------------------------------GCAACTTCAGCAGCAG--------------------------CAACTTCAGCAGCAACA----------------------------------------------------------------------------------------------ACAA--------CAGCAG---CA---GCAACAGC------TTATTCAACAGCAACAGCTGGAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------AACT------------------------------------A-CTATACGTA--CATGCA--SizeHit CountTotal NormTotal
No Reads
droEug1
CAGCGACTG------------------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGCA--------GCAGCAGC---AGC---AGCAACAGCAA---------CAGCA---------------------GCAACATGCCCATGCAGCAGCAGCAGTTGCTGCC---------------------------------------CAGCAGCAGCAGC--AACTCG---------------------CCCAGCA--------------------------------GCAACAC----------------CCGCAACAGCAGCAACAGCAGCAGCAGCAGGCCAACATC------------------------------------------AGTTGC-----------------------------------------------------------------------------------------------A----AG----------------TACGCCAATGATCCTGTGACGCCGGGCGGAAGTGGGGTGGGGGTGTTCCTGGC------------------------------------A-GCAGCAACA--ACAACA--SizeHit CountTotal NormTotal
No Reads
dm3
CGCCTGGAA------------------TCCCGCC-------------------------------------------------------------------------------------------AGGCGCACGCCCAGCGCAACGAGCACGGCGTGGA------TGGCGGATCACGA----------CAGAATGAG-----------------------------------------------CAGCTGCA--------GCAGTCGG---AAC---TGCATCATCAC---------CTGCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--AGCAGCAG---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAG---------------------------------------CAACAGCAGCAGTTGGAGGACGCT-----------------------------------------------------------------------------------------------------------------------------------ATGG------------------------------------A-GGAGCAGCA--CATGGC--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................ATGAG-----------------------------------------------CAGCTGCA--------GCAGTCGG---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
....................................................................................................................................................................................................................................................CAGCTGCA--------GCAGTCGG---AAC---T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CGGCGTGGA------TGGCGGATCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AGCACGGCGTGGA------TGGCGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--GCAG---------------------------------------CAACAGCAGCAGTTGGAG......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGTTGGAGGACGC.................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGGAGGACGCT-----------------------------------------------------------------------------------------------------------------------------------ATGG------------------------------------A-GGAG...............2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................GAATGAG-----------------------------------------------CAGCTGCA--------GCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GA----------CAGAATGAG-----------------------------------------------CAGCTGCA--------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GAG-----------------------------------------------CAGCTGCA--------GCAGTCGG---AAC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGTTGGAGGACGCT-----------------------------------------------------------------------------------------------------------------------------------ATGG------------------------------------A-GG.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................ACGGCGTGGA------TGGCGGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATCAGCAGCA--GCAG---------------------------------------CAACAGC.................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCATCAGCAGCA--GCAG---------------------------------------CAAC....................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................C---------CTGCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--AG..................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGTTGGAGGACA..................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATCAGCAGCA--GCAG---------------------------------------CA......................................................................................................................................................................................................................20150.3350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG---------------------CAGCA----------------------------------------------------------------------------------------------GCACC...............................................................................................................................................................................................................................................................................18200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000010000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--AGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--...................................................................................................................................................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--G..................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAG---------------------------------------........................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAG---------------------------------------C.......................................................................................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--...................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATCAGCAGCA--GCAG---------------------------------------CAAC....................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCA................................................................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCAGCAGCA--GCAG---------------------------------------CAAC....................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA--GCAG---------------------------------------CAACAGCAGCAGT...........................................................................................................................................................................................................22110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GC.................................................................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--A...................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAG---CAGC--AGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCAGCAGCA--GCAG---------------------------------------CAAC....................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--...................................................................................................................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAG---------------------------------------C.......................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--G..................................................................................................................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATCAGCAGCA--GCAG---------------------------------------C.......................................................................................................................................................................................................................19190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CA........................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCA--GCAG---------------------------------------CAACAGCAGC..............................................................................................................................................................................................................24100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAG---CAGC--AGCAGCAG---------------------CAGCA----------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--AGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--AG..................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAGC--AGCAGCAG---------------------CAGCA----------------------------------------------------------------------------------------------GCAC................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAG---CAGC--A...................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAG---CAGC--AGC.................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--AGC.................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAG---CAGC--AGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------------------GCAACAGCAGCAG---CAGC--AG..................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATCAGCAGCA--GCAG---------------------------------------........................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAG---CAGC--AGCA................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATC............................................................................................................................................................................................................................................................................18110.0910000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--GCAG---------------------------------------CAACAGCAGCAGT...........................................................................................................................................................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCA--GCAG---------------------------------------CAACAGC.................................................................................................................................................................................................................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCAGCAGCA--GCAG---------------------------------------CA......................................................................................................................................................................................................................19160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droSim2
CGCCTGGAA------------------TCCCGCC-------------------------------------------------------------------------------------------AGGCGCACGCCCAGCGCAACGAGCACGGCGTGGA------TGGCGGATCACGG----------CAGAATGAG-----------------------------------------------CAGCTCCA--------GCAGTCGG---AAC---TGCATCACCAC---------CTGCA---------------------------------------------------------------------------------------GC------------AACAGC--AGCAACAG---------------------CAACA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAA---------------------------------------CAACAGCAGCAGTTGGAGGACGCTCTGGAGGAGCACCAGATGG----------------------------------------C----CG---------------------------------------------------------------CCGATC------------------------------------A-CCAGCAGCA--GCAGCA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACGCTCTGGAGGAGCA.....................................................................................................................................................................................2011.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------CAACAGCAGCAGTTGGAGGACGCT................................................................................................................................................................................................2511.00100000000000100000
.........................................................................................................................................................................................................................................................................................................CTGCA---------------------------------------------------------------------------------------GC------------AACAGC--AGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................1871.00700007000000000000
...................................................................................................................................................GCACGGCGTGGA------TGGCGGATCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
.....................................................................................................................................................................TGGCGGATCACGG----------CAGAATGAG-----------------------------------------------CAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--GCAA---------------------------------------CAACAGCAGCAGTTGGA.......................................................................................................................................................................................................2411.00100000010000000000
..................................................................................................................................................AGCACGGCGTGGA------TGGCGGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--GCAA---------------------------------------CAACAGCAGCAGT...........................................................................................................................................................................................................1950.20100000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCATCAGCAGCA--GCA................................................................................................................................................................................................................................................................18100.10100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------A-CCAGCAGCA--GCAGC...16200.05100000001000000000
droSec2
GAGGACGAG------------------A----------------------------------------------------TGGCTATACTGGACACCAAACTGGATCACTGGGCCACCAACAACCTGCCGCTGGACAAGTA----------------------------------CAG----------CA---------------AGCTGCTCAGCAACAAGGGC-TTGAAGAAGCGT------GAGCAGC---AG-----C---------------------------------------AGCAACAGCAGCAGCAACAACA------------------------------------------------------------------GCAGCAACAGCAGCAGAA---TGG------CAATGG---------------AA---------------------------------------------------------------------------------------------------------------------------TCGGC---AGTTA---TGCGAGCAGC-------------------------------------------------------------------------------AG----------CAGTAGC---------------------------------------------------------------TCCTCC------------------------------------A-CTGGCAGCA--GCAGCA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................AGAA---TGG------CAATGG---------------AA---------------------------------------------------------------------------------------------------------------------------TCGGC---AGTT..............................................................................................................................................................................................................................................2411.0011000
....................................................................................................................................................................................................................CAGCAACAAGGGC-TTGAAGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------CAGTAGC---------------------------------------------------------------TCCTCC------------------------------------A-CTGGCAGC...........2411.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAA---TGG------CAATGG---------------AA---------------------------------------------------------------------------------------------------------------------------TCGGC---AG................................................................................................................................................................................................................................................2511.0010010
....................................................................................................................................................................................................................CAGCAACAAGGGC-TTGAAGAAGCGT------GAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
......GAG------------------A----------------------------------------------------TGGCTATACTGGACACCAAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
.................................................................................................................................................................................G----------CA---------------AGCTGCTCAGCAACAAGGGC-TT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
............................................................................................................................................................................................................................AGGGC-TTGAAGAAGCGT------GAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................GG------CAATGG---------------AA---------------------------------------------------------------------------------------------------------------------------TCGGC---AGTTA---T.........................................................................................................................................................................................................................................2111.0010010
..........................................................................................................CACTGGGCCACCAACAACCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................GAA---TGG------CAATGG---------------AA---------------------------------------------------------------------------------------------------------------------------TCGGC---..................................................................................................................................................................................................................................................1911.0011000
.....................................................................................................................................................................................................................................................................C---------------------------------------AGCAACAGCAGCAGCAACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001
.....................................................................................................................................................................................................................................................AGCAGC---AG-----C---------------------------------------AGCAACAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
...............................................................................................................................................................................................................................................................G-----C---------------------------------------AGCAACAGCAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
........................................................................................................................................................................................................................................................................................................................CAGCAACAACA------------------------------------------------------------------GCAGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510001
.......................................................................................................................................................................................................................................................................................................................GCAGCAACAACA------------------------------------------------------------------GCAGCAACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
......................................................................................................................................................................................................................................................................................................................AGCAGCAACAACA------------------------------------------------------------------GCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
..........................................................................................................................................................................................................................................................................................................................GCAACAACA------------------------------------------------------------------GCAGCAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010
...........................................................................................................................................................................................................................................................................................................................CAACAACA------------------------------------------------------------------GCAGCAACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
...........................................................................................................................................................................................................................................................................................................................CAACAACA------------------------------------------------------------------GCAGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
........................................................................................................................................................................................................................................................................................................................CAGCAACAACA------------------------------------------------------------------GCAGCAACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010
........................................................................................................................................................................................................................................................................................................................CAGCAACAACA------------------------------------------------------------------GCAGCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001
...........................................................................................................................................................................................................................................................................................................................CAACAACA------------------------------------------------------------------GCAGCAACAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
............................................................................................................................................................................................................................................................................................................................AACAACA------------------------------------------------------------------GCAGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
............................................................................................................................................................................................................................................................................................................................AACAACA------------------------------------------------------------------GCAGCAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
...........................................................................................................................................................................................................................................................................................................................CAACAACA------------------------------------------------------------------GCAGCAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010
...............................................................................................................................................................................................................................................................................................................................AACA------------------------------------------------------------------GCAGCAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
droYak3
CGCCTGGAA------------------TCCCGCC-------------------------------------------------------------------------------------------AGGCGCACGCCCAGCGCACCGAGCACGGCGTGGA------TGGAGGATCACGG----------CAGAGTGAG-----------------------------------------------CAGCTGCA--------GCAGTCGG---AGC---TGCATCACCAC---------CTGCA---------------------------------------------------------------------------------------GC------------AACAGC--AACAGCAG---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAG---------------------------------------CA---GCAGCAGCTGGAGGACGCCATTGAGGATCACCAGATGG----------------------------------------CAACGG--------------------AT--------------------------------------------CACC------------------------------------A-TCAGCAGCA--GCAGCA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------CAGCA----------------------------------------------------------------------------------------------GCACCATCAGCAGCA--GCAG---------------------------------------........................................................................................................................................................................................................................2520.50101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCATCAGCAGCA--GCAG---------------------------------------CA---G..................................................................................................................................................................................................................2230.33100000100000
...........................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------------------GC------------AACAGC--AACAGCAG---------------------CAGC...................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
...........................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------------------GC------------AACAGC--AACAGCAG---------------------CAGCA----------------------------------------------------------------------------------------------GC..................................................................................................................................................................................................................................................................................26200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................C------------AACAGC--AACAGCAG---------------------CAGC...................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
droEre2
TGGCTCCGC-CACCACCTCCAAAAATGTC------G-----------------------------------------------------------------------------------------------------------------------AAGAAGA-AGC-----AA--CGTCAAGGTCTGGA----GCAGCAGCAGCATG----------------AG---GC-T------CA---------------G--------C---AGCAAC---------CAAATCAACAACGCCAGCA---------GCA---ACAGCA---------------------------------------------------------------ACGTC---TGCAGCAGCAAAATC--AAAACCAG---------------------CACCAACGC---TTGCAGCAACAACCGAA--------GCAACAG----------------CAGCAACGTCT---------AC--------------A-----ACAG--------CAGCAT------CAGC---AGCAG---CGTGTGCCAC-------------------------------------------------------------------------------AG----------CAACGTA---------------------------------------------------------------TGCAAC------------------------------------A-ACAGCAGCA--TCAGCA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................AGCAGCATG----------------AG---GC-T------CA---------------G--------C---AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACCGAA--------GCAACAG----------------C..........................................................................................................................................................................................................................................................................................................................2311.0010100000
................................................................................................................................................................................GTCAAGGTCTGGA----GCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......................................................................................................................................................................................................................................T------CA---------------G--------C---AGCAAC---------CAAATCAACAACGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.............................................................................................................................................................GAAGA-AGC-----AA--CGTCAAGGTCTGGA----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
............................................................................................................................................................................A--CGTCAAGGTCTGGA----GCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAG----------------CAGCAACGTCT---------AC--------------A-----ACAG--------CA...................................................................................................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAG---CGTGTGCCAC-------------------------------------------------------------------------------AG----------CAA..................................................................................................................................2211.0010000010
..........CACCACCTCCAAAAATGTC------G-----------------------------------------------------------------------------------------------------------------------AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
...................................................................................................................................................................AGC-----AA--CGTCAAGGTCTGGA----GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------CAGCAACGTCT---------AC--------------A-----ACAG--------CAGCAT------C........................................................................................................................................................................................................................................................2811.0011000000
................................................................................................................................................................................GTCAAGGTCTGGA----GCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAT------CAGC---AGCAG---CGTGTG....................................................................................................................................................................................................................................1911.0010000100
.............................................................................................................................................................................................................................................................................................................................ACAGCA---------------------------------------------------------------ACGTC---TGCAGCAGCAAAATC--A...................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------CAGCAACGTCT---------AC--------------A-----ACAG--------C....................................................................................................................................................................................................................................................................2011.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----ACAG--------CAGCAT------CAGC---AGCAG---C.........................................................................................................................................................................................................................................2140.2510000010

Generated: 05/17/2015 at 10:54 PM