ID:

dmo_693

 Coordinate:

scaffold_6473:6673514-6673664 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.5 -23.1 -23.1

Flybase annnotation

exon [dmoj_GLEANR_16329:2]; CDS [Dmoj\GI15604-cds]; intron [Dmoj\GI15604-in]

Repeatable elements

NameClassFamilyStrand
(CAGT)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#####################-----------------------------
TGTTAGTGTTGTAGCTGTTGTCGCTACCGCTGGCAGTGTTTTGTTGTACTGCTACGGCTCTGGTGTATGTCTGCGCGCTGTTGTTGTTGCTCGGCTCTGTTTTGCCAGTAGGCCGCCTTGGCATTCACATAGTGATTGCGGTGAAACGTAGCAACACATTCATTCAGTCAGTCAGTTAGTCAGTCAGTCACTCACTCACAGGTGAGGCAGCAGCGAAACTAAAAGCCAGAGATAGGCAGGCAGTAGAGGCG
****************************************************************......(((((((((((.((...((((((((((((......)))..)))))....))))...))))))))..)))))..************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V041
embryo
 V056
head
................................................................GTATGTCTGCGCGCTGTTGT....................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................AGCCAGAGATAGGCAGGCAGTAGAGGC. 27 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................CACATAGTGATTGCGGTG............................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................CAGTCACTCACTCACAGGT................................................ 19 0 1 1.00 1 1 0 0 0 0
.........TGTAGCTGTTGTCGCTACCGCTGGCAGT...................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................CACATAGTGATTGCGGTGAAACGT...................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
....................................................................................................TTTGCCAGTAGGCCGCCTTGGCATT.............................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
................................................................GTATGTCTGCGCGCTGTTGTT...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................CAGTCACTCACTCACAGGTGA.............................................. 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................TCAGTCACTCACTCACAGGTGAGGC........................................... 25 0 1 1.00 1 0 0 1 0 0
.............................................GTACTGCTACGGCTCTGGTGT......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................TTCACATAGTGATTGCGGTGA........................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................ACTCACAGGTGAGGCAGCA....................................... 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................................AGGCAGGCAGTAGAGGCG 18 0 1 1.00 1 0 0 0 1 0
.............................................................................................................................CACATAGTGATTGCGGTGAAACGTAGC................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................AGTGATTGCGGTGAAACGTAGC................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................CAGCAGCGAGACTGAAAGCCA....................... 21 2 1 1.00 1 0 1 0 0 0
........................................TTGTTGTACTGCTACGGCTCTGGT........................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
............................................TGTACTGCTACGGCTCTGGT........................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................ACCGCTGGCAGTGTTTTGTTGTACT......................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
............................GCTGGCAGTGTTTTGTTGTACTGC....................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0
................................................................................................................................................................CATTCAGTCAGTCAGTTAGT....................................................................... 20 0 2 0.50 1 0 1 0 0 0
.....................................................................................................................................................................................................................................AGATAGGCTGGAAGTAGAAGC. 21 3 4 0.25 1 0 1 0 0 0
.....................................................................................................................................................................................................................................AGATAGGCTGGCAGTAGC.... 18 2 7 0.14 1 1 0 0 0 0
......................................................................................................................................................................................................................................GATAGGCTGGAAGTAGAAGC. 20 3 9 0.11 1 0 1 0 0 0
.....................................................................................................................................................................................................................................AGATAGGCTGGAAGTAG..... 17 2 9 0.11 1 0 0 0 0 1
.....................................................................................................................................................................AGTCAGTCAGTTAGTCAGT................................................................... 19 0 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

ACAATCACAACATCGACAACAGCGATGGCGACCGTCACAAAACAACATGACGATGCCGAGACCACATACAGACGCGCGACAACAACAACGAGCCGAGACAAAACGGTCATCCGGCGGAACCGTAAGTGTATCACTAACGCCACTTTGCATCGTTGTGTAAGTAAGTCAGTCAGTCAATCAGTCAGTCAGTGAGTGAGTGTCCACTCCGTCGTCGCTTTGATTTTCGGTCTCTATCCGTCCGTCATCTCCGC
************************************************************************************************************......(((((((((((.((...((((((((((((......)))..)))))....))))...))))))))..)))))..**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
 V049
head
..................................................CGATGCCGAGGCCAGAAA....................................................................................................................................................................................... 18 3 20 2.35 47 34 13 0 0
.................................................................................................................................................................................................................CGTCGCTTTGGTTTTCGGTCT..................... 21 1 2 0.50 1 1 0 0 0
......................AGATGGGGACCGTCACAAG.................................................................................................................................................................................................................. 19 3 15 0.07 1 0 0 1 0
...................................CACAGATCAATATGACGAT..................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:6673464-6673714 + dmo_693 TGTTAGTGTTGTAGCTG-----------------------------TTGTCGCTACCGCT--------------GGCAGT--GTTTTG--TTGTAC-------------------------------------T------------GC--------------------------------------------------------TACG------GCTCTGGT---------------------GTATGTCTGCGCGCTGTTGT-----------TGTTGCTCGGCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTGCCAGTAG--GCCGCCTTGGCATTCAC----------------------ATAGTGATTGCGGTGAAACGTAGCAACACATTCA---------------------TTCAG--------TCAGTCAGTTAGTCAGTCAGTCA----C------------------TCACTCACAGGTGAG--GCA------------------GCAGCGAAA------------CTAAAAGCCAGAGATAGG----CAGGCAGTAG--AGG-CG
droVir3 scaffold_12726:1828983-1829266 - G-TTGCTGTTGTTGTTG-----------------------------------CTACCGCT--------------GGCTGTATGTTTTG--TTGTAC-------------------------------------T------------GCTGC---------------------------------GGCTGGTGG-----------CAGC------G---------CCG---------------T--------------TGTT--GTT---GC------TGCTTGGCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-TTTGCCAGTAG--GCCGCCTTGGCATTCACACACAGACACACACACACACACACAGCGTTTTCGGTGAAACGTAGCCACACATTCA---------------------TTCAGTTAGTTAGTCAGTCAGTCAGTTAGTCAGTCA----C------------------TCACTTACAGGTGAGCAGCAGCAGCAGCAGCAGCA------GCTAAA------------CTAAAAGCCAGAGGCAGG----CAGGCAGCAG--AGG-CG
droGri2 scaffold_15203:8126061-8126330 - A-CTGTTGCGGCTGCTG-----------------------------GCAGCAACGCT-----------------G----------TT-----------------------------------GTTGTTAGTGTT------------G---G---------------------------------TGTTGTTGC---------------------------------------------------------------------------------------TTGGCTCTGTAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTAGCAG--GCCGCCTTGGCATTCGC----------------------AGAGCGCTGTTGGTGAAACGTAGCCACACAT--------------------TTCATTCAGTCACTCAGTCAGTCAGTCACTCAGTTAGTCAGTCAGTCACTACTACTCACTCACGCACGCACAGGTGAGCGGCAGCAGCAGCAGCAGCAGCT--AATCCAAAAA-----------AAAAGGCAGAGGCAGGCAGGCAGGCAGCAG--AGG-CG
droWil2 scf2_1100000004511:9012836-9012994 + TGTTGTTGTTGTTGTTG-----------------------------TTGTTGCTGCC-----------------------------------------------------------------GTTGCTGTTGGC------------A-----------AATGCCAAA-------CA-CCGCAAT------TGT--------TGCTGTCAT-TGTTCTG------TTACA---------------CTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA---ATCG------------------------------CTTCATTTA-------------------------------------------------------------TTATAGTCGCGACTTGGTTCAGTCAGTCAGTCAGTCAGTCGGTCCGTCAGTCA----T------------------------------------------------------------------------------------------------------------------TCA
dp5 4_group3:10523131-10523380 - TACTATTGTTGCTGGTG-----------------------------GTGTTTTTGTT-----------------------------------------------------------------GCTGGCAGC--T------------A----CAACATGATTGCCAGA-----------CATTGTT------GT-----------TGCT------GTTACCATTTCAGA--TTAC------GGC--------------CCG--------------------------------------------AGTTTTAGTTGGC---------ACACAGGGCCCTCCTCTGCCAGTCCCCCCAGTCCCCCCAGGCCCGACACATGCCTACAAGCT-TATTTATAATAAA-AAA-TCATACATGAGCGCACAGACAATGAGACAATAGACCAGAAATGCTACTAGG-----GA---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT---------------------------ACTAC--AGG-CG
droPer2 scaffold_11:1999747-2000001 - GGTTTTTTTGGCAGG-GCTGCACAGCCAGCGGAACCAAGGGAAGAATTTTCGATACC-----------------------------------------------------------------GATGGTGA---------------------AAACTCGCATACAAAGCAGTACAGTGTCAATATT------GC-----------A---------------GTGTGAAA--TAA---------A--------------GTGT--GCTG----------------------TAAATGA-------------------AAGAAATCTTTGAA------------------------------------------------------------------CAACT---GAA-TCG----------------------------------------------TGTGTGTGCTTCC---A-----------------------------GCCCT-GG-----------------------------------ATTCGGTGAAACGTAGCAGCGTACACA---------------------CACAC--------ACACACACACAGGCACGCACAC------------------------CCACACACATCGGGCTGGCA----------------------------------------------------------------------G--CATCGA
droAna3 scaffold_13340:22200888-22201039 - TGCTGTTGCTGCTGCTG-----------------------------TTGTTGCTGCTGCA--------------CCCAGT--GAGATGGATAGTACA-------------------------GTTGGGGAATATAGTGTTGGGTTTG--------------------------CGT-CTGCTGT------TGC-----------CGCT------G---------CTGATGGTGTG---G---G--------------TGTT--GGCCGTGT------T------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------TG-----GCGGCT---GCTG------------------------------TTGCATTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG----------------------------G--TGG-TG
droBip1 scf7180000396499:93039-93168 + TGCTGTTGTTGTTGTTG-----------------------------TTGTTGCTGCC-----------------------------------------------------------------GCTGGTGCTGCA------------GTTGT---------------------------------TGCAGATGT--------TGCTGCTGC-ACTGCTGCCAC---------------------GT----C-------GACT--GGTACTGCTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA---GCCGCTGTCCTGG-TACATTTATAA--GCAACCCTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301523:9217-9335 - TGTTAGTGTTGCTGCTG-----------------------------CTGTAACCGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GTTGT---------------------------------TGTTGATGT-----------CGTC------G---------CAGCCATTGTAGCCGCGGT--------------TGT--------------------------------------------CGTGGTTGAA---------------------------------------------------------------------GACCTTTGCCT----------------------------------------------------------------------------------------------------TTG--GCTTCCTTGGCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droFic1 scf7180000454066:1210055-1210221 + TGTTGTAGCTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GTTAAGATTGCTCATGTTGCTGTTG--------------------------TGT---------------------------TCCCTGATATTGCTG------CCCGTGCTACC---GATGT--------------TGCT--GCTG----------------------TTATTTG-------------------CTGAAGCTTCTGTT---------------------------------------------------A---------------------------------------------------------------------------AG-----AATATT---GCTG------------------------------CTGTATTTGC-------------------------------------------------------------------------------------------------------------------AAATTGACTGCTGTCAAA----------------------A------------------------------ATG-------------------------------------C--TAA-TA
droEle1 scf7180000491194:690237-690358 - TGCTGCTGCTGTTGCTG-----------------------------CTGTTGCTGCT-----------------------------------------------------------------GCTGCTGTTGCT------------GCTGC---------------------------------TGCTGTTGC-----------TGCT------G---------CTGATGTTGCT----------------------------------GC------TGCTGGG----------------CTGCCGTTG---------------------------------------------------------------------TCG---------------------------------------------------------------------------TG-----GA----------------------------GTCC--GCATCCTCGATCTTCGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--TGG-TG
droRho1 scf7180000767806:10894-11029 - TGCTGTTGCTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GCTGTTGTTGCT------------T------------------------------CTGCAGC------TGC--------AGCTGTTGC-ACGGCTGTGAT---------------------GTATGGCGGCGGCTTATGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------TTTTGTCATCGGCTTGCCACCCAC----------------------A------------------------------ATGGGTGTAATG----------------------------G--TGGCGG
droBia1 scf7180000302428:5893212-5893302 - TGCTGTTGTTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GCTGCTGCTGCT------------GTTGT---------------------------------TGCTGCTGC-----------TGCT------G---------CTGTTGTTGCTGCTGCTGC--------------TGC--------------------------------------------TGTTGTTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413414:164855-165045 - TGCTGCTGCTGTTGTTG-----------------------------ATGTTGCTGCT-----------------------------------------------------------------GTTGTTCATGTT------------C------------------------------C------GCTTGTTGTTCAAGTGCTGCGGATAT-ACAAATAAAAG---------------------GT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTAAAATAATGTTT------GAATGTAGAAATAAGTTAATTAATTGTAGCCAGGA----A--------------------------------ATATGTTATCCATTGGCAATAAAT----------------------A------------------------------AAAAGAGTATTAAAAATTATAAATA------------------AA-TAA
droEug1 scf7180000409005:1223922-1224057 + TGCTGCTGTTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GCTGTTGTTGTT------------T------------------------------CTGCAAT------TGC--------AGCTGTTGC-ACGGCTGTGAT---------------------GTATGGCGGCGGCTTATGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------TTTTGTCATCGGCTTGCCACCCAC----------------------A------------------------------ATGGGTGTAATG----------------------------G--TGGCGG
dm3 chr3L:14020859-14020978 + TGTTGTTGTTGTTGCTG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCTGC---------------------------------ATCTGGTGT-----------TGGT------G---------CTGCAATTGCTGCTGCTGC--------------TGA--------------------------------------------ATTTGTTGCTGCT---------GCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCT--GCTGCTTTTGTGTTCGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:5186415-5186673 + TGTTATTGCTGCTGCTG-----------------------------CTGGTGTTATTGGCATTGTAGAGCACCGGACTGGGTGTTGTT--TTCCAC-TTGGAGTCGAGCGGTACGGCCACAG---------GCT------------G--------------------------TTG-CTGCTGT------TGC-----------TGTT------G---------TTGCT----------------------------------GCTG----------------------CGACTGGTTGGCAATGGGTG---------------------------------------------------------------------TGAAAAAGTTCTGCCTATGAGTGGCGGACACATTCACCGGCGAGTGGGCAATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTCAGAGGAGAAGCTCCGGCGTGGTTA-----------ACAGGTGAGGTGTAGGAGGGCGTGGCAGAT--CGG-GA
droSec2 scaffold_27:619539-619777 + TGTTATTGCTGCTGCTG-----------------------------CTGGTGTTATTGGCATTGTAGAGCACCGGACTGGGTGTTGTT--TTCCAC-TTGGAGTCGAGCGGTACGGCCACAG---------------------------------------------------------GTTGTT------GC-----------TGTT------G---------TTGCT----------------------------------GCTG----------------------CGACTGGTTGGCAATGGGTG---------------------------------------------------------------------TGAAAAAGTTCTGCCTATGAGTGGCGGACACATTCACCGGCGAATGGGCAATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTCAGAGGAGAAGCTCCGGCGTGGTTA-----------ACAGGTGAGGTGTAGGAG-----------G--GCG-TG
droYak3 X:18714459-18714592 + TGCTGCTGTTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GTTGCTGCTGTT------------G------------------------------C------TGCTGTTGT--------TGCTGCTGCTGCTG---------------CTGCTGATGCTGC--------------TGT-----TGCTGCTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT---GCTGCTGCTCCTG-CTTGCTTATTGTTGTCGTCATGGTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droEre2 scaffold_4784:12691068-12691228 - TGATGTTGCTGCTGCCG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCTGTTGCTGTT------------G----CAACGCTGCTACT----------TG-CCGTTGTT------GC-----------TGCT------G---------CTGCTGCC------GCAGT--------------TGCT--GCTGCTGC------TG------------------------------------CT---------GCGGCTCCTGCTG---------------------------------------CCG---------------------------------------------------------------------------TG-----GG---TGTTGCTA------------------------------C-------GT----------------------GTAGTTG---------------------------------------------------------------------------------------------TTGCCATAAAC----------------------A------------------------------ACG-------------------------------------CAGCAA-CA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGTTAGTGTTGTAGCTG-----------------------------TTGTCGCTACCGCT--------------GGCAGT--GTTTTG--TTGTAC-------------------------------------T------------GC--------------------------------------------------------TACG------GCTCTGGT---------------------GTATGTCTGCGCGCTGTTGT-----------TGTTGCTCGGCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTGCCAGTAG--GCCGCCTTGGCATTCAC----------------------ATAGTGATTGCGGTGAAACGTAGCAACACATTCA---------------------TTCAG--------TCAGTCAGTTAGTCAGTCAGTCA----C------------------TCACTCACAGGTGAG--GCA------------------GCAGCGAAA------------CTAAAAGCCAGAGATAGG----CAGGCAGTAG--AGG-CGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................GTATGTCTGCGCGCTGTTGT-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGAGATAGG----CAGGCAGTAG--AGG-C.2711.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC----------------------ATAGTGATTGCGGTG......................................................................................................................................................................................................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCA----C------------------TCACTCACAGGT.......................................................................................1911.001100000
.........TGTAGCTG-----------------------------TTGTCGCTACCGCT--------------GGCAGT--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC----------------------ATAGTGATTGCGGTGAAACGT................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCCAGTAG--GCCGCCTTGGCATT..............................................................................................................................................................................................................................................2511.001100000
...................................................................................................................................................................................................................................................GTATGTCTGCGCGCTGTTGT-----------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCA----C------------------TCACTCACAGGTGA.....................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCA----C------------------TCACTCACAGGTGAG--GC................................................................................2511.001000010
............................................................................................GTAC-------------------------------------T------------GC--------------------------------------------------------TACG------GCTCTGGT---------------------GT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAC----------------------ATAGTGATTGCGGTGA.....................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCACAGGTGAG--GCA------------------GCA..........................................................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG----CAGGCAGTAG--AGG-CG1811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC----------------------ATAGTGATTGCGGTGAAACGTAGC.............................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGATTGCGGTGAAACGTAGC.............................................................................................................................................................................................2211.001000001
.....................................................................................TTG--TTGTAC-------------------------------------T------------GC--------------------------------------------------------TACG------GCTCTGGT---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................TGTAC-------------------------------------T------------GC--------------------------------------------------------TACG------GCTCTGGT---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................................................ACCGCT--------------GGCAGT--GTTTTG--TTGTAC-------------------------------------T------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.........................................................GCT--------------GGCAGT--GTTTTG--TTGTAC-------------------------------------T------------GC--------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------TTCAG--------TCAGTCAGTTAGT....................................................................................................................................2020.501000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------TCAGTCAGTTAGTCAGT................................................................................................................................19200.051000100
droVir3
G-TTGCTGTTGTTGTTG-----------------------------------CTACCGCT--------------GGCTGTATGTTTTG--TTGTAC-------------------------------------T------------GCTGC---------------------------------GGCTGGTGG-----------CAGC------G---------CCG---------------T--------------TGTT--GTT---GC------TGCTTGGCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-TTTGCCAGTAG--GCCGCCTTGGCATTCACACACAGACACACACACACACACACAGCGTTTTCGGTGAAACGTAGCCACACATTCA---------------------TTCAGTTAGTTAGTCAGTCAGTCAGTTAGTCAGTCA----C------------------TCACTTACAGGTGAGCAGCAGCAGCAGCAGCAGCA------GCTAAA------------CTAAAAGCCAGAGGCAGG----CAGGCAGCAG--AGG-CGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................GTAC-------------------------------------T------------GCTGC---------------------------------GGCTGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................C---------------------------------GGCTGGTGG-----------CAGC------G---------CCG---------------T--------------TGTT--G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................GTGG-----------CAGC------G---------CCG---------------T--------------TGTT--GTT---GC------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCAGTCAGTTAGTCAGTCA----C------------------T..................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................TGTTTTG--TTGTAC-------------------------------------T------------GCTGC---------------------------------GGCTGGTGG-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA------GCTAAA------------CTAAAAGCCAGAGGC.........................2811.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------GCTAAA------------CTAAAAGCC...............................1811.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CCG---------------T--------------TGTT--GTT---GC------TGCTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................G--TTGTAC-------------------------------------T------------GCTGC---------------------------------GGCTGGTGG-----------CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........GTTGTTG-----------------------------------CTACCGCT--------------GGCTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACAGGTGAGCAGCAGCAGCA.........................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------GCTAAA------------CTAAAAGCCAGAGGCA........................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCA----C------------------TCACTTACAGGT.......................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...........TTGTTG-----------------------------------CTACCGCT--------------GGCTGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................GTT--GTT---GC------TGCTTGGCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTAGTCAGTCA----C------------------TCACTTACAGGT.......................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGTCA----C------------------TCACTTACAGGTG......................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTACAGGTGAGCAGCAGC.............................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACACAGCGTTTTCGGT.......................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCCAGAGGCAGG----CA................1811.001000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--GCCGCCTTGGCATTCA............................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCAGCAGCAGCAGCAGCAG..................................................................2350.603000000000000000000000000000000000000000000000000000000000000003
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGTTAGTCAGTCA----C------------------T..................................................................................................1920.501000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGTGAGCAGCAGCAGCAGC.......................................................................2220.501000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCAGCAGCAGCAGCAGCAGC.................................................................2440.502001000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCAGCAGCAGCAGCA......................................................................19150.477005000000000000000000020000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTGAGCAGCAGCAGCAGC.......................................................................2130.331000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCA------GCTAAA------------C.......................................2240.251000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCAGCAGCAGCAGC.......................................................................18170.244002000000000000000000020000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAGTCAGTCAGTTAGTCA..............................................................................................................................2250.201000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCAGCAGCAGCAGCAGC....................................................................21120.172002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCAGCAGCAGCAGCAG.....................................................................20140.071001000000000000000000000000000000000000000000000000000000000000
droGri2
A-CTGTTGCGGCTGCTG-----------------------------GCAGCAACGCT-----------------G----------TT-----------------------------------GTTGTTAGTGTT------------G---G---------------------------------TGTTGTTGC---------------------------------------------------------------------------------------TTGGCTCTGTAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTAGCAG--GCCGCCTTGGCATTCGC----------------------AGAGCGCTGTTGGTGAAACGTAGCCACACAT--------------------TTCATTCAGTCACTCAGTCAGTCAGTCACTCAGTTAGTCAGTCAGTCACTACTACTCACTCACGCACGCACAGGTGAGCGGCAGCAGCAGCAGCAGCAGCT--AATCCAAAAA-----------AAAAGGCAGAGGCAGGCAGGCAGGCAGCAG--AGG-CGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGCACGCACAGGTGAGCGGCA...............................................................................2411.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC----------------------AGAGCGCTGTTGGTGAAAC..................................................................................................................................................................................................2211.00110
....................................................ACGCT-----------------G----------TT-----------------------------------GTTGTTAGTGTT------------G---G---------------------------------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGCAGGCAGGCAGGCAGCAG--......2311.00101
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGCAGAGGCAGGCAGGCA................2111.00101
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGGTGAGCGGCAGCAGCA.........................................................................2211.00101
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCATTCGC----------------------AGAGCGCTGTTGGTGA.....................................................................................................................................................................................................2811.00101
droWil2
TGTTGTTGTTGTTGTTG-----------------------------TTGTTGCTGCC-----------------------------------------------------------------GTTGCTGTTGGC------------A-----------AATGCCAAA-------CA-CCGCAAT------TGT--------TGCTGTCAT-TGTTCTG------TTACA---------------CTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA---ATCG------------------------------CTTCATTTA-------------------------------------------------------------TTATAGTCGCGACTTGGTTCAGTCAGTCAGTCAGTCAGTCGGTCCGTCAGTCA----T------------------------------------------------------------------------------------------------------------------TCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCAGTCAGTCAGTCAGT........................................................................................................................................20200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTCAGTCAGTCGGT....................................................................................................................................18200.05100010
..........GTTGTTG-----------------------------TTGTTGCTGCC-----------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05110000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGTCAGTCAGTCGGT....................................................................................................................................19200.05100010
......TGTTGTTGTTG-----------------------------TTGTTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
dp5
TACTATTGTTGCTGGTG-----------------------------GTGTTTTTGTT-----------------------------------------------------------------GCTGGCAGC--T------------A----CAACATGATTGCCAGA-----------CATTGTT------GT-----------TGCT------GTTACCATTTCAGA--TTAC------GGC--------------CCG--------------------------------------------AGTTTTAGTTGGC---------ACACAGGGCCCTCCTCTGCCAGTCCCCCCAGTCCCCCCAGGCCCGACACATGCCTACAAGCT-TATTTATAATAAA-AAA-TCATACATGAGCGCACAGACAATGAGACAATAGACCAGAAATGCTACTAGG-----GA---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT---------------------------ACTAC--AGG-CGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................CCCCAGTCCCCCCAGGCCCGAC..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
droPer2
GGTTTTTTTGGCAGG-GCTGCACAGCCAGCGGAACCAAGGGAAGAATTTTCGATACC-----------------------------------------------------------------GATGGTGA---------------------AAACTCGCATACAAAGCAGTACAGTGTCAATATT------GC-----------A---------------GTGTGAAA--TAA---------A--------------GTGT--GCTG----------------------TAAATGA-------------------AAGAAATCTTTGAA------------------------------------------------------------------CAACT---GAA-TCG----------------------------------------------TGTGTGTGCTTCC---A-----------------------------GCCCT-GG-----------------------------------ATTCGGTGAAACGTAGCAGCGTACACA---------------------CACAC--------ACACACACACAGGCACGCACAC------------------------CCACACACATCGGGCTGGCA----------------------------------------------------------------------G--CATCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCACAC------------------------CCACACACATCGGGCTG..................................................................................2511.001100000
...............................................TTTCGATACC-----------------------------------------------------------------GATGGTGA---------------------AAACTCGCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droAna3
TGCTGTTGCTGCTGCTG-----------------------------TTGTTGCTGCTGCA--------------CCCAGT--GAGATGGATAGTACA-------------------------GTTGGGGAATATAGTGTTGGGTTTG--------------------------CGT-CTGCTGT------TGC-----------CGCT------G---------CTGATGGTGTG---G---G--------------TGTT--GGCCGTGT------T------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------TG-----GCGGCT---GCTG------------------------------TTGCATTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG----------------------------G--TGG-TGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGCTGTTGTTGTTGTTG-----------------------------TTGTTGCTGCC-----------------------------------------------------------------GCTGGTGCTGCA------------GTTGT---------------------------------TGCAGATGT--------TGCTGCTGC-ACTGCTGCCAC---------------------GT----C-------GACT--GGTACTGCTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA---GCCGCTGTCCTGG-TACATTTATAA--GCAACCCTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGTTAGTGTTGCTGCTG-----------------------------CTGTAACCGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GTTGT---------------------------------TGTTGATGT-----------CGTC------G---------CAGCCATTGTAGCCGCGGT--------------TGT--------------------------------------------CGTGGTTGAA---------------------------------------------------------------------GACCTTTGCCT----------------------------------------------------------------------------------------------------TTG--GCTTCCTTGGCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droFic1
TGTTGTAGCTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GTTAAGATTGCTCATGTTGCTGTTG--------------------------TGT---------------------------TCCCTGATATTGCTG------CCCGTGCTACC---GATGT--------------TGCT--GCTG----------------------TTATTTG-------------------CTGAAGCTTCTGTT---------------------------------------------------A---------------------------------------------------------------------------AG-----AATATT---GCTG------------------------------CTGTATTTGC-------------------------------------------------------------------------------------------------------------------AAATTGACTGCTGTCAAA----------------------A------------------------------ATG-------------------------------------C--TAA-TASizeHit CountTotal NormTotal
No Reads
droEle1
TGCTGCTGCTGTTGCTG-----------------------------CTGTTGCTGCT-----------------------------------------------------------------GCTGCTGTTGCT------------GCTGC---------------------------------TGCTGTTGC-----------TGCT------G---------CTGATGTTGCT----------------------------------GC------TGCTGGG----------------CTGCCGTTG---------------------------------------------------------------------TCG---------------------------------------------------------------------------TG-----GA----------------------------GTCC--GCATCCTCGATCTTCGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--TGG-TGSizeHit CountTotal NormTotal
No Reads
droRho1
TGCTGTTGCTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GCTGTTGTTGCT------------T------------------------------CTGCAGC------TGC--------AGCTGTTGC-ACGGCTGTGAT---------------------GTATGGCGGCGGCTTATGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------TTTTGTCATCGGCTTGCCACCCAC----------------------A------------------------------ATGGGTGTAATG----------------------------G--TGGCGGSizeHit CountTotal NormTotal
No Reads
droBia1
TGCTGTTGTTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GCTGCTGCTGCT------------GTTGT---------------------------------TGCTGCTGC-----------TGCT------G---------CTGTTGTTGCTGCTGCTGC--------------TGC--------------------------------------------TGTTGTTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGCTGCTGCTGTTGTTG-----------------------------ATGTTGCTGCT-----------------------------------------------------------------GTTGTTCATGTT------------C------------------------------C------GCTTGTTGTTCAAGTGCTGCGGATAT-ACAAATAAAAG---------------------GT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTAAAATAATGTTT------GAATGTAGAAATAAGTTAATTAATTGTAGCCAGGA----A--------------------------------ATATGTTATCCATTGGCAATAAAT----------------------A------------------------------AAAAGAGTATTAAAAATTATAAATA------------------AA-TAASizeHit CountTotal NormTotal
No Reads
droEug1
TGCTGCTGTTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GCTGTTGTTGTT------------T------------------------------CTGCAAT------TGC--------AGCTGTTGC-ACGGCTGTGAT---------------------GTATGGCGGCGGCTTATGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------TTTTGTCATCGGCTTGCCACCCAC----------------------A------------------------------ATGGGTGTAATG----------------------------G--TGGCGGSizeHit CountTotal NormTotal
No Reads
dm3
TGTTGTTGTTGTTGCTG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCTGC---------------------------------ATCTGGTGT-----------TGGT------G---------CTGCAATTGCTGCTGCTGC--------------TGA--------------------------------------------ATTTGTTGCTGCT---------GCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCT--GCTGCTTTTGTGTTCGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................T-----------------------------------------------------------------GCTGCTGTTGTT------------GCTGC---------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1981.25100000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CTGCTGC--------------TGA--------------------------------------------ATTTGTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................GTT------------GCTGC---------------------------------ATCTGGTGT-----------TGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................TGCTGTTGTT------------GCTGC---------------------------------ATCTGGTGT-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCTGGTGT-----------TGGT------G---------CTGCAATTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TGT-----------TGGT------G---------CTGCAATTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTTGTTGTTGTTGCTG-----------------------------CTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.95190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000029000000000000000000000000000400000
.......GTTGTTGCTG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.901800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000016
TGTTGTTGTTGTTGCTG-----------------------------CTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.801600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213000000000000000000000000000000000
..TTGTTGTTGTTGCTG-----------------------------CTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000006000000000000000000000000000000000
........................................................T-----------------------------------------------------------------GCTGCTGTTGTT------------GCTGC---------------------------------AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CTGCAATTGCTGCTGCTGC--------------TG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
TGTTGTTGTTGTTGCTG-----------------------------CTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000
.....................................................TGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGTTGTTGTTGCTG-----------------------------CTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000
...............................................................................................................................................................................................................T------G---------CTGCAATTGCTGCTGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2550000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000
.GTTGTTGTTGTTGCTG-----------------------------CTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000001010000000000000000000000000
.....................................................TGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000010000000000000000000000000000
...TGTTGTTGTTGCTG-----------------------------CTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................GCTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.GTTGTTGTTGTTGCTG-----------------------------CTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.....................................................TGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCTGC---------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..TTGTTGTTGTTGCTG-----------------------------CTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000020000000000000000000000000
TGTTGTTGTTGTTGCTG-----------------------------CTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
..........................................................................................................................GCTGCTGTTGTT------------GCTGC---------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................TGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTTGTTGTTGTTGCTG-----------------------------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GCTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.GTTGTTGTTGTTGCTG-----------------------------CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................CTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............TG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCTGCTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..............CTG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCTGCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
........TTGTTGCTG-----------------------------CTGCTGCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTGTTGTTGTTGCTG-----------------------------CTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............GCTG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCTGCTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GCTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.....TTGTTGTTGCTG-----------------------------CTGCTGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......TGTTGTTGCTG-----------------------------CTGCTGCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................CT-----------------------------------------------------------------GCTGCTGTTGTT------------GCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CTGCT-----------------------------------------------------------------GCTGCTGTTGTT------------GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTTGTTGTTGTTGCTG-----------------------------CTGCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGTTATTGCTGCTGCTG-----------------------------CTGGTGTTATTGGCATTGTAGAGCACCGGACTGGGTGTTGTT--TTCCAC-TTGGAGTCGAGCGGTACGGCCACAG---------GCT------------G--------------------------TTG-CTGCTGT------TGC-----------TGTT------G---------TTGCT----------------------------------GCTG----------------------CGACTGGTTGGCAATGGGTG---------------------------------------------------------------------TGAAAAAGTTCTGCCTATGAGTGGCGGACACATTCACCGGCGAGTGGGCAATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTCAGAGGAGAAGCTCCGGCGTGGTTA-----------ACAGGTGAGGTGTAGGAGGGCGTGGCAGAT--CGG-GASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................T------------G--------------------------TTG-CTGCTGT------TGC-----------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.20400000000004000000
..............................................................................................................................................................................................TGC-----------TGTT------G---------TTGCT----------------------------------GCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.20400000000004000000
droSec2
TGTTATTGCTGCTGCTG-----------------------------CTGGTGTTATTGGCATTGTAGAGCACCGGACTGGGTGTTGTT--TTCCAC-TTGGAGTCGAGCGGTACGGCCACAG---------------------------------------------------------GTTGTT------GC-----------TGTT------G---------TTGCT----------------------------------GCTG----------------------CGACTGGTTGGCAATGGGTG---------------------------------------------------------------------TGAAAAAGTTCTGCCTATGAGTGGCGGACACATTCACCGGCGAATGGGCAATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTCAGAGGAGAAGCTCCGGCGTGGTTA-----------ACAGGTGAGGTGTAGGAG-----------G--GCG-TGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TGCTGCTGTTGCTGCTG-----------------------------TTGTTGCTGCT-----------------------------------------------------------------GTTGCTGCTGTT------------G------------------------------C------TGCTGTTGT--------TGCTGCTGCTGCTG---------------CTGCTGATGCTGC--------------TGT-----TGCTGCTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT---GCTGCTGCTCCTG-CTTGCTTATTGTTGTCGTCATGGTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................C------TGCTGTTGT--------TGCTGCTGCTGCTG---------------CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000010000
..................................................................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT---GCTGCTGCTCCTG-CT.......................................................................................................................................................................................................................................................................19200.05101000000000
................................................................................................................................GCTGTT------------G------------------------------C------TGCTGTTGT--------TGCTGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000001
droEre2
TGATGTTGCTGCTGCCG-----------------------------CTGCTGCTGCT-----------------------------------------------------------------GCTGTTGCTGTT------------G----CAACGCTGCTACT----------TG-CCGTTGTT------GC-----------TGCT------G---------CTGCTGCC------GCAGT--------------TGCT--GCTGCTGC------TG------------------------------------CT---------GCGGCTCCTGCTG---------------------------------------CCG---------------------------------------------------------------------------TG-----GG---TGTTGCTA------------------------------C-------GT----------------------GTAGTTG---------------------------------------------------------------------------------------------TTGCCATAAAC----------------------A------------------------------ACG-------------------------------------CAGCAA-CASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:50 PM