ID:

dmo_690

 Coordinate:

scaffold_6473:6429736-6429886 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.7 -17.1 -17.0

Flybase annnotation

CDS [Dmoj\GI15598-cds]; exon [dmoj_GLEANR_16323:2]; intron [Dmoj\GI15598-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+
mature
  1. scaffold_6308:2654014-2654034 -
  2. dmo_690  scaffold_6473:6429758-6429778 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTGAATGCGGACATCTATTATCATGGCCATAAGCGTGAGCAGGGACACAGGTGAGAACAACAACAGCCACAACAGCGGCAACAGCAACAACGACAACAACAACAGCAATAAGAACAGTTCAAGCTATCGCTGAGTCAACACCTGAGTCAACAGTCATCATTCAGTTTCGTCAAGTTTTCGTCGAATTTCATCAAGATAGCATCAATTTTGCAATGTGCAATAAGCTTTTTGTCTTTATCTCAATAATAATC
**************************************************...............(((........)))...........................................(((((((((((((......(((......))).....)))))))((((............)))).........)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
............................ATAAGCGTGAGCAGGGACACA.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0
...............................AGCGTGAGCAGGGACACAGAGT...................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0
........GGACATCTATTATCATGGCC............................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0
.................TTATCATGGCCATAAGCGTGAGCAGGG............................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0
..GAATGCCGACATCCATTATGAT................................................................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0
........................................................................CAGCGGCAACAGCAACAACGA.............................................................................................................................................................. 21 0 2 0.50 1 1 0 0
...AATGCCGACATCCATTATGAT................................................................................................................................................................................................................................... 21 3 6 0.33 2 1 1 0
...........................................................................................................................................AGCTGAGTCAATAGTCAT.............................................................................................. 18 2 5 0.20 1 0 0 1
.....................................................................CAACAGCGGCAACAGCAAC................................................................................................................................................................... 19 0 8 0.13 1 1 0 0
..............................................................................................................................................................................................................TTTGGAGTGTGCAATAAG........................... 18 2 11 0.09 1 0 1 0
...AATGCCGACATCCATTATGA.................................................................................................................................................................................................................................... 20 3 13 0.08 1 1 0 0
.......................................................................................CAACGACAACAACAACAGC................................................................................................................................................. 19 0 20 0.05 1 1 0 0

Anti-sense strand reads

AACTTACGCCTGTAGATAATAGTACCGGTATTCGCACTCGTCCCTGTGTCCACTCTTGTTGTTGTCGGTGTTGTCGCCGTTGTCGTTGTTGCTGTTGTTGTTGTCGTTATTCTTGTCAAGTTCGATAGCGACTCAGTTGTGGACTCAGTTGTCAGTAGTAAGTCAAAGCAGTTCAAAAGCAGCTTAAAGTAGTTCTATCGTAGTTAAAACGTTACACGTTATTCGAAAAACAGAAATAGAGTTATTATTAG
**************************************************...............(((........)))...........................................(((((((((((((......(((......))).....)))))))((((............)))).........)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body
...TTACGGCTGTAGGTAATACTA................................................................................................................................................................................................................................... 21 3 6 0.17 1 0 1
....TACGGCTGTAGGTAATACTAC.................................................................................................................................................................................................................................. 21 3 8 0.13 1 1 0
..CTTACGGCTGTAGGTAATAC..................................................................................................................................................................................................................................... 20 3 9 0.11 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:6429686-6429936 + dmo_690 TTGAATGCGGA------------------------------CATCTAT---TATCATGGCCA-------TAAGCGTG--------AGCA---GGGACACA-------------------GGTGAGA--------ACAACAACA---GC-----CACAACAG--------------C-G------------------------GCAACAGCA---------------A-----------CAACGACAA------CAACAACAGC---------AAT-A-------------------AGA-AC---------------AGTTCA--------------------------------------AG---------------------------CTATCG---------------------------CT-GAG-----TC---------------------------------AACA------------------CCTGAGT---------------------C---AACAGTCATCA-TTCAGTTTCGTCAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGTCGAATTTCATC----------------------------AA---------------------------------------------------------GATAGCATC---------------AATT---TTGCAATGTGCAATAAGCTTTT----TGTCTTTATCTCAATAA---TAATC
droVir3 scaffold_12726:2042932-2043223 - CTGGGCGCCGA------------------------------CGGCAAC---TATCACGGCCA-------CAAGCGTC--------AGCT---GGGACACAGGTG---------AG---CAATGGC-AA--CAAC--AGCAACA---AC-----------AA------CAACAT--C----------------------------AACAACA---------------A--------------CAACAA------CAACAACAAC---------A---------------------------A------TAACAG---CAATAACAATAA------C--------------------------AA------------------------------------------C-----------------------------------------------------AATGCAT-----------------------CACCTACATCCAATGTCTTATCAGCTGAGTCAACAACAGTCACTG-TTAAGTTTCGTCAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTCAAGCTTCGTT----------------------------AA---------------------------------------------------------GATAGCAACCAAATGCATTCTATGAATTATGC--CTACGGATGAATAGCT-TT----TGGTTTTATCTTTATGA---CAGCG
droGri2 scaffold_14853:2324908-2325148 - TTGAAAACGAATGTCCA---------------------AAA---------------TGGCC-------A--------GTGACAGTTG---------------TTAC------------CAGCAACA--------ACAACAACAGCAACAA--------AAA--------------C-A------------------------GCATCAGCA---------------A--------C---------AACAACAACAACAACAGC-----------------------------A-------A---------------CAACAAGAACAT------TTGTAACTGAAACTGTTTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCCAGACA-------------------------------CGGCAACAATTTTTAGCTCTGCTGCAATCGATGTCGACTTGGATTAGAAGCCATTTTC------------------------------------------------------------------------------ACAAT---------------GGTG---CTGG-------AATATGTCTTTGAAATGTCTCTC------------T-CTC
droWil2 scf2_1100000004837:1381062-1381268 + CATTGA-----------------------------------------T---TGTGGTGGCTG-------GGCGGGT----------------------CA----GCCA------G---GAATGGC-A-------ACAGCAACA---GC--AACAGCAACA------G--------C----------------------------AACAGCA---------------A--------CAGCAA------------CAGCAACAAAAAAAAAAACTA-CAACACATCATCCCAACAA----------------------------------------------------AA------------------------------------------------AAGTAGCAAAAACGAGAACAA------------------------------------------AATGTGC-----------------------TAACTAGAAT------------------------------------------------------------------------------------------------------------------------------------------------------------CAA---------------------------TTTCGTTTTTTCCA-TTT----------------------------TTTTGTTGTGCTTCATT----------------------------GA---------------------------------------------------------CAAAGCATC-----------------------------------------------------------------------AA
dp5 3:624249-624436 + AGCCT---------------------------------CTG-------------------C-------AGATACCAC--------AGC-------------------A---ACAG---CAGCAGC-AG--CAAC--AGCAGCA---GCAA-----------------CAGC--AG-CA------------------------GCAGCAGCA---------------A--------C------------------AGC------------------------------------------AGCAGCAACAACAGCAGCAACAGCAGCAA------C--------------------------AG---------------------------------CAGCAGCA------------ACA---------------GC---------------------------------------------------------AGC----------------------------------------------------------------------------------------------------------------------------CGCAACAGCTACAGCAAC-------------------------CCTCCA---ATTTCAAGGCCAGCTTCAATTTGACTAACTT----------------------------TTTTAATGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT
droPer2 scaffold_1:7236668-7236871 - AATTT---------------------------------AAATA----------------GC-------A--------ATAACAATTG---------------CAAC------------GTACAACA--------ACCGCAGC--------------------------------------------------------------AGCAGCAACAACAACAACAGCAACAGTTGCA-----A------------CAACAACAACA--------------------------------ACA-AC------------------AGCTACAA------C----------------------------------------TACCAC----------------------TAC-------------------------------------------------------------------------------------------------------------------------------A-GCCAGTC-----AAGTATTTAGAGAATCTAACGAGCTCAGGAGCAACTTCAGGTGC-----CATCGCAGCGACAACAACTTTTACAGGTGCT------GCGA-A-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGT-TTC
droAna3 scaffold_13337:16233613-16233801 + CCCCAT-C------------------------------AGGCGGCAAC----------GCCA-------CT---------ACAATTG---------CACA----GCCAATTG------ATGCAGC-AA--CATC--AACAGC-----------------AT---CAGCAG-----C----------------------------AGCAGCA---------------A--------------CAGCAA------CATCAGCAGC---------A---------------------------G------CAACATCAACAGCAGCA-----------------------------------------------------------------------------GCAGCAACAGGAGCAATTAACTTT-GCA-----TC-------------------------------------------------AGCA--CTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCATTCAAAGTCTACAGTGAGTA---------------------------------------------------TTGACTCGAG--------------------------TTT
droBip1 scf7180000396640:1106818-1107056 + CCCAGTGCGCCTATGTA---------------------CAA----------------------------------------------T-------------------A---ACAA---TAGTAGT-AG--CAAC--AGCAACC---ACAA-----------------CAACAA--CCAACAGGGCCAAGAAGTAACTACCTATTAACAACA---------------A--------C---------AACAACAACAAGAACAAG-----------------------------A-------A---------------CAGAATAAACAT------C--------------------------AA---------------------------------CACCGACA------------G------------------------------CTAACAGCAACA-------TTTAACACCAAACTGTAGAAAAATTACAAA-------------------------------------A-ACCAATCAC-----------------------------------------AAAGT---------------------------------------------------ATCCA--------------------------ATTCCG------------------------------------------------------------------------------------------------------------T------------------------AATCCG---------------------------------------------------------------------AA----TTCTGTTACCCTTCCGTTTTT-ATC
droKik1 scf7180000302441:2839890-2840098 - CTGAGCGA---------------------------------------------------CC-------C--------ACAGCGCTTG-------------------------CAATATCTGCAGCA--------ACAGCAACTGCTGCAA--------AAGCAG---CAAC--AG-CA------------------------GCAGCAGCA---------------A--------------------------CAAC------------------------------------------AACAACAAATACTTATACAGCAGCAGCAAACTCCCC--------------------------AG---------------------------------CAGCAGCA------------GCC---------------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGATTCT------CCAACAGA---------AGTTACCAATCGACCCCCA---GCAACAAATCATGCAGCA-----------AG--------------------------------------TGTTG-------------------------------------------------------------------------------------------------------------------------------------------------------ATAACGCAGCAA---CAATT
droFic1 scf7180000454055:1191061-1191258 + AGCAG---------------------------------CAA----------------------------------------------------------------------------------------------------CA---CG--AACAGCAACA------C--------C----------------------------AACAGCA---------------A--------CAGCAACAGCAG------CAGCAACATC------GTCAA-CAGCAACACGTGCCAGCAACAGC-AAT---------------AGCAAT--------------------------------------AGCAGTTGCAATGAC--AATATGGCAGTAA-----CA------------------ATT----TTTATACAGAT-GGTCTCGCACAGTTAGCGGCAGCA-------T--CATAAAAAGTTGCAGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGAAACAGCAA--------------------------------TT-AGC
droEle1 scf7180000491255:2474490-2474745 - CAACA----------------------------------------------------------------------------------------------------------ACAA---CAGCAGC-AA--CAAC--AGCAGCA---GCAA--------CAACAA---CAAC--AG-CA------GCAGC------------AACAACAA--------------------------------------------CAACAGCAGC---------------------------------------AGCAACAACAACAGCAGCAGCAACAA------C--------------------------AA---------------------------------CAGCAGCA------------GCA---------------AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAGCAACAAC------AAGTCTTGGCTCAGCAACAACCTCAACCTGG----------------------------------------------------------------------------ACAACAAGTCATAACCCAGCGGCACGTCATTAACACATCCACAGCCCAAGGTCAACAAATCATTCAGAGCCA---------------------------------------------------------------------TA----TGTCTTTGGCCTTGCAAAAAC-AGC
droRho1 scf7180000760202:71946-72181 + ACAA-----------------------------------------------------------------------------------C-------------------A---ACAG---CAGCAGC-AA--CAAC--AGCAGCA---GCAA-----------------CAACAG--C-A------------------------GCAACAGCA---------------A--------C---------AACAACAACAGCAGCAAC-----------------------------A-------G---------------CAACAACAACAA------C--------------------------AGCAGCTGCAACAAC---------------------------------------------------------------------------------------------------------------------AACATC-------------------------------------------------------------------------------------------------------------------------------------------AGGTCTTGGCACAGCAACAACCTCAGCCTGG----------------------------------------------------------------------------ACAACAAGTCATCACCCAGCGCCACGTTATAAACACATCTACGGCCCAAGGACAACAAATCATTCAGAGCCA---------------------------------------------------------------------TA----TGTCTTTAGCTTTGCAGAAAC-AGC
droBia1 scf7180000302428:1288586-1288784 - TAAATG-----------------------------------------------------CC-------ATAGTCAAC--------AGCATTATGAACTCTGCCAAC------------CAGTACCA--------GCAG-------------------------------------C-A------------------------GCAGCAGCAGCAACAACAACAGCAGCATCAGCA-----A------------CACCAGCAGCA--------------------------------ATG-TA---------------------------------------------------------------GGTTCAA-AACACCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACTTGGCAATA--CTCAACGATG----------------------------------------------------------------------------ACAATCCTTCATTTTACAGCGG---------------------------------------------------------GTAACACACAAGGCAACAGC---------------AATG---CTGC-------AG---------------------------------TGCAC
droTak1 scf7180000412843:78967-79119 - GTTGGTGCTGG------------------------------TAGCGGT---AGTCAAGCAAA-------TAGTGTCA--------AGC-------------------A---TCTG---CAGAATA-AGCA----AAAGCAACA---AC--AACTACAGCA------G--------C----------------------------AACAGCA---------------A--------AAGCAACAACAA------CAACAGCAAC------CGCAA-CAGCAACAC------------------------------------------------------------------------------G---------------------------ATGTTGCAGCAGCA------------------------------------------------------------------ACA------------------ACAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409032:796313-796515 + CAAC-------------------------------------------------------------------------------------------------------A---GCAG---CAGCAGC-AA--CAAC--AGCAGCA---GCAA-----------------CAAC--AG-CA------------------------GCAG-----------------------------------------------CAGCAACAAC------CGCAG-CT-----------------------G------CTGCAACAACAACAGCA-----------------------------------------------------------------------------GCAGCAAC---------C---------------A--------------------------------------------------------------------------------------------------------ATC------------------------CAAGTTCAAAAGCAACCACAAATAATCTACC--------------------TGCAGCGAAAGCCAT------A-G---------------AG---------------------------TTTCAT-----------------------------------------TCCTCCAAACATAATA----------------------------AA---------------------------------------------------------AATAA--AC---------------AATA---AACTGACATGCAATTACCCTTT--------------------------TGT
dm3 chr3L:14018685-14018916 - CGGAAA-T------------------------------T---------AATGATTACTTCTTTTTAGCAA-----------------A-------------------T---ACAG---CAGCAA-----------------CA---AC--AACAACAACA------G--------C----------------------------AGCAGCA---------------G--------CAGCAACAACAA------CAGCAGCAGC------AAC---------------------------AACAGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCTGACGCAGCAACAGCCACAGCCTGGACAA------------------------------CAGCAACAA----------------------------------------GTCATCACTCAGCGCCATGTTATAAACACATCCACGGCTCAAGGACAACAAATCATTCAAAGTCA---------------------------------------------------------------------TA----TGTCTTTGGCCTTGCAGAAGC-AGC
droSim2 2r:16675352-16675513 - GAAC-------------------------------------------------------------------------------------------------------A---GCAA---CAGCAAC-AG--C----------------------------AA---CAGCAG-----C----------------------------AGCAGCA---------------A--------------CAGCAA------CAACAACAGC---------ATT-GGCA--------------------AC---------------A----------------------------------------------------------------------------------------------------------------------------------------------------TGCAACA------------------CCATTAT---------------------C---AACACACATTGACACACT----------------------------------------------------------------------------------------------------TTCCGCCGCGGTTGTTGTTGCATTTCCGGTGGTGTTGAAGTAAGCGTCC-----------GG--------------------------------------TTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAATT-GCT
droSec2 scaffold_0:6165237-6165488 - TAAAATGAAGA--ACATATATTATTTCTTACCGGAAATT---------AATTATTGCTTCTTTTTAGCAA-----------------A-------------------T---ACAG---CAGCAGC-AA--CAAC--AGCAGCA---GCAA-----------------CAAC--AG-CA------------------------ACAA-----------------------------------------------CAACAACAAC------------------------------------AACAGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCTGACGCAGCAACAACCACAGCCTGGACAA------------------------------CAGCAACAA----------------------------------------GTCATCACTCAGCGCCATGTTATAAACACATCCACGGCTCAAGGACAACAAATCATTCAAAGCCA---------------------------------------------------------------------TA----TGTCTTTGGCCTTACAGAAGC-AGC
droYak3 X:14153044-14153220 - TGCCACACCGA------------------------------CAGCAAC---CATCCCCGCCA-------CCAGCAGC--------AACA---GTAACACA-----------------------------------------------------------------------------------------------TTGCCCAGCAGCAACA---------------A--------C---------AACAACAACAACAACAGC-----------------------------A-------G---------------CAGCAGCAACAA------CTGCAACAGCAACCAAGTGCCAATACAAG-------------------------TGCCAATC---------------------------CT-G--------------------------------AGTGGAT-----------------------CACCGGGATC------------------------CAC-GTCGTCA-GCCAGTCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT
droEre2 scaffold_4690:4989619-4989765 + ATGACG----A------------------------------CAACAAT---AAGCAAG--C-------AGGAGCAGC--------AGC-------------------A---GCAG---CAGCAGC-AGCA----GCAGCAACA---GCAG-----------------CAAC--AG-CA------------------------GCAGCAGCA---------------A--------------------------CAGC------------------------------------------AGCAGCAGCAACAGCAGCAGCAGCAGCAG------C--------------------------AG---------------------------------CAGCAGCA------------GCA---------------AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGCAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTGAATGCGGA------------------------------CATCTAT---TATCATGGCCA-------TAAGCGTG--------AGCA---GGGACACA-------------------GGTGAGA--------ACAACAACA---GC-----CACAACAG--------------C-G------------------------GCAACAGCA---------------A-----------CAACGACAA------CAACAACAGC---------AAT-A-------------------AGA-AC---------------AGTTCA--------------------------------------AG---------------------------CTATCG---------------------------CT-GAG-----TC---------------------------------AACA------------------CCTGAGT---------------------C---AACAGTCATCA-TTCAGTTTCGTCAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGTCGAATTTCATC----------------------------AA---------------------------------------------------------GATAGCATC---------------AATT---TTGCAATGTGCAATAAGCTTTT----TGTCTTTATCTCAATAA---TAATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................A-------TAAGCGTG--------AGCA---GGGACACA-------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................AGCGTG--------AGCA---GGGACACA-------------------GAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
........GGA------------------------------CATCTAT---TATCATGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................T---TATCATGGCCA-------TAAGCGTG--------AGCA---GGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............................................................................................................................................................CAG--------------C-G------------------------GCAACAGCA---------------A-----------CAACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
...........................................................................................................................................................CAACAG--------------C-G------------------------GCAACAGCA---------------A-----------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.131100000
..............................................................................................................................................................................................................................................CAACGACAA------CAACAACAGC---------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droVir3
CTGGGCGCCGA------------------------------CGGCAAC---TATCACGGCCA-------CAAGCGTC--------AGCT---GGGACACAGGTG---------AG---CAATGGC-AA--CAAC--AGCAACA---AC-----------AA------CAACAT--C----------------------------AACAACA---------------A--------------CAACAA------CAACAACAAC---------A---------------------------A------TAACAG---CAATAACAATAA------C--------------------------AA------------------------------------------C-----------------------------------------------------AATGCAT-----------------------CACCTACATCCAATGTCTTATCAGCTGAGTCAACAACAGTCACTG-TTAAGTTTCGTCAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTCAAGCTTCGTT----------------------------AA---------------------------------------------------------GATAGCAACCAAATGCATTCTATGAATTATGC--CTACGGATGAATAGCT-TT----TGGTTTTATCTTTATGA---CAGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................GGCCA-------CAAGCGTC--------AGCT---GGGACACAGAGT---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
...........................................................CCA-------CAAGCGTC--------AGCT---GGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
........................................................CGGCCA-------CAAGCGTC--------AGCT---GGGACACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
.......................................................ACGGCCA-------CAAGCGTC--------AGCT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
....................................................ATCACGGCCA-------CAAGCGTC--------AGCT---GGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAACAACAGTCACTG-TTAAGT........................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................C--AGCAACA---AC-----------AA------CAACAT--C----------------------------AAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.081000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CAA------CAACAACAAC---------A---------------------------A------TAACAG---CAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................GTC--------AGCT---GGGACACAGAGT---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................GC-AA--CAAC--AGCAACA---AC-----------AA------CAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CA---AC-----------AA------CAACAT--C----------------------------AACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................T--C----------------------------AACAACA---------------A--------------CAACAA------CAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
droGri2
TTGAAAACGAATGTCCA---------------------AAA---------------TGGCC-------A--------GTGACAGTTG---------------TTAC------------CAGCAACA--------ACAACAACAGCAACAA--------AAA--------------C-A------------------------GCATCAGCA---------------A--------C---------AACAACAACAACAACAGC-----------------------------A-------A---------------CAACAAGAACAT------TTGTAACTGAAACTGTTTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCCAGACA-------------------------------CGGCAACAATTTTTAGCTCTGCTGCAATCGATGTCGACTTGGATTAGAAGCCATTTTC------------------------------------------------------------------------------ACAAT---------------GGTG---CTGG-------AATATGTCTTTGAAATGTCTCTC------------T-CTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CATTGA-----------------------------------------T---TGTGGTGGCTG-------GGCGGGT----------------------CA----GCCA------G---GAATGGC-A-------ACAGCAACA---GC--AACAGCAACA------G--------C----------------------------AACAGCA---------------A--------CAGCAA------------CAGCAACAAAAAAAAAAACTA-CAACACATCATCCCAACAA----------------------------------------------------AA------------------------------------------------AAGTAGCAAAAACGAGAACAA------------------------------------------AATGTGC-----------------------TAACTAGAAT------------------------------------------------------------------------------------------------------------------------------------------------------------CAA---------------------------TTTCGTTTTTTCCA-TTT----------------------------TTTTGTTGTGCTTCATT----------------------------GA---------------------------------------------------------CAAAGCATC-----------------------------------------------------------------------AASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................AACA---GC--AACAGCAACA------G--------C----------------------------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.20401003
..............................................................................................................................A-------ACAGCAACA---GC--AACAGCAACA------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15300030
......................................................................................................................................ACAGCAACA---GC--AACAGCAACA------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15300030
............................................................................................................................C-A-------ACAGCAACA---GC--AACAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
............................................................................................................................................................................................................AACAGCA---------------A--------CAGCAA------------CAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
............................................................................................................................................................AACA------G--------C----------------------------AACAGCA---------------A--------CAGCAA------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................AACAGCAACA------G--------C----------------------------AACAGCA---------------A--------CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
dp5
AGCCT---------------------------------CTG-------------------C-------AGATACCAC--------AGC-------------------A---ACAG---CAGCAGC-AG--CAAC--AGCAGCA---GCAA-----------------CAGC--AG-CA------------------------GCAGCAGCA---------------A--------C------------------AGC------------------------------------------AGCAGCAACAACAGCAGCAACAGCAGCAA------C--------------------------AG---------------------------------CAGCAGCA------------ACA---------------GC---------------------------------------------------------AGC----------------------------------------------------------------------------------------------------------------------------CGCAACAGCTACAGCAAC-------------------------CCTCCA---ATTTCAAGGCCAGCTTCAATTTGACTAACTT----------------------------TTTTAATGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................CA------------------------GCAGCAGCA---------------A--------C------------------AGC------------------------------------------AGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
............................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
............................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.1010100000000
............................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26130.0810100000000
.............................................................................................................................................................................................................GCAGCA---------------A--------C------------------AGC------------------------------------------AGCAGCAACAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27170.0610100000000
............................................................................................................................C-AG--CAAC--AGCAGCA---GCAA-----------------CAGC--AG-CA------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
.................................................................................................................AG---CAGCAGC-AG--CAAC--AGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.....................................................................................................................................................A-----------------CAGC--AG-CA------------------------GCAGCAGCA---------------A--------C------------------AGC------------------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
...................................................................................................................................AAC--AGCAGCA---GCAA-----------------CAGC--AG-CA------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.............................................................................................................................................CA---GCAA-----------------CAGC--AG-CA------------------------GCAGCAGCA---------------A--------C------------------AG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
...................................................................................................................................................CAA-----------------CAGC--AG-CA------------------------GCAGCAGCA---------------A--------C------------------AGC------------------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
.................................................................................................................................................................................................................................................................................................................................GCAGCAA------C--------------------------AG---------------------------------CAGCAGCA------------ACA---------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..............................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
...............................................................................................................ACAG---CAGCAGC-AG--CAAC--AGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
...........................................................................................................................................................................................................................................C------------------AGC------------------------------------------AGCAGCAACAACAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000010000
.......................................................................................C-------------------A---ACAG---CAGCAGC-AG--CAAC--AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
............................................................................C--------AGC-------------------A---ACAG---CAGCAGC-AG--CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000010
............................................................................C--------AGC-------------------A---ACAG---CAGCAGC-AG--CAAC--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
...............................................................................................................................................................................................................................................................GC------------------------------------------AGCAGCAACAACAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
...........................................................................................................................GC-AG--CAAC--AGCAGCA---GCAA-----------------CAGC--A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
......................................................................................GC-------------------A---ACAG---CAGCAGC-AG--CAAC--AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
................................................................................................................................................................................................................................................................C------------------------------------------AGCAGCAACAACAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................A------C--------------------------AG---------------------------------CAGCAGCA------------ACA---------------GC---------------------------------------------------------AGC----------------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................20200.0510100000000
................................................................................................................CAG---CAGCAGC-AG--CAAC--AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
.................................................................................................................................................................................................................CA---------------A--------C------------------AGC------------------------------------------AGCAGCAACAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
........................................................................................................................................................................AGC--AG-CA------------------------GCAGCAGCA---------------A--------C------------------AGC------------------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000001
..............................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010000000
........................................................................................................................................................................AGC--AG-CA------------------------GCAGCAGCA---------------A--------C------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010000
................................................................................................................................................................................................................................................................C------------------------------------------AGCAGCAACAACAGCAGCAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
...................................................................................................................................................................................................................................................................................................................................AGCAA------C--------------------------AG---------------------------------CAGCAGCA------------ACA---------------GC---------------------------------------------------------AGC----------------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................24200.0510000000001
................................................................................................................................................................................................................................................................................................................................AGCAGCAA------C--------------------------AG---------------------------------CAGCAGCA------------ACA---------------GC---------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
.................................................................................................................................................................................................................................................................................................................................GCAGCAA------C--------------------------AG---------------------------------CAGCAGCA------------ACA---------------GC---------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
....................................................................................................................................AC--AGCAGCA---GCAA-----------------CAGC--AG-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000000
..............................................................................................................................AG--CAAC--AGCAGCA---GCAA-----------------CAGC--AG-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
.......................................................................................................................................................................CAGC--AG-CA------------------------GCAGCAGCA---------------A--------C------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
.......................................................................................C-------------------A---ACAG---CAGCAGC-AG--CAAC--AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAACAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
............................................................................................................................................GCA---GCAA-----------------CAGC--AG-CA------------------------GCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
droPer2
AATTT---------------------------------AAATA----------------GC-------A--------ATAACAATTG---------------CAAC------------GTACAACA--------ACCGCAGC--------------------------------------------------------------AGCAGCAACAACAACAACAGCAACAGTTGCA-----A------------CAACAACAACA--------------------------------ACA-AC------------------AGCTACAA------C----------------------------------------TACCAC----------------------TAC-------------------------------------------------------------------------------------------------------------------------------A-GCCAGTC-----AAGTATTTAGAGAATCTAACGAGCTCAGGAGCAACTTCAGGTGC-----CATCGCAGCGACAACAACTTTTACAGGTGCT------GCGA-A-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGT-TTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTAACGAGCTCAGGAGC..................................................................................................................................................................................................................................................................................................................................................2014.004400000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTTTTACAGGTGCT------G...........................................................................................................................................................................................................................................................................................2012.002200000
......................................................................................G---------------CAAC------------GTACAACA--------ACCGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................AC-------------------------------------------------------------------------------------------------------------------------------A-GCCAGTC-----AAGTATTTAGAGA.....................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................CAACAACAACAGCAACAGTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501010000
........................................................................................................................ACAACA--------ACCGCAGC--------------------------------------------------------------AGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201001000
..........................................................................................................................................CAGC--------------------------------------------------------------AGCAGCAACAACAACAACAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
droAna3
CCCCAT-C------------------------------AGGCGGCAAC----------GCCA-------CT---------ACAATTG---------CACA----GCCAATTG------ATGCAGC-AA--CATC--AACAGC-----------------AT---CAGCAG-----C----------------------------AGCAGCA---------------A--------------CAGCAA------CATCAGCAGC---------A---------------------------G------CAACATCAACAGCAGCA-----------------------------------------------------------------------------GCAGCAACAGGAGCAATTAACTTT-GCA-----TC-------------------------------------------------AGCA--CTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCATTCAAAGTCTACAGTGAGTA---------------------------------------------------TTGACTCGAG--------------------------TTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................G------CAACATCAACAGCAGCA-----------------------------------------------------------------------------GCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.251100000
..........................................................................................................................................CAGC-----------------AT---CAGCAG-----C----------------------------AGCAGCA---------------A--------------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201100000
............................................................................................................................................................................................................AGCAGCA---------------A--------------CAGCAA------CATCAGCAGC---------A---------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.111000001
...............................................................................................................................................................AT---CAGCAG-----C----------------------------AGCAGCA---------------A--------------CAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
.......................................................................................................................................................................................................................................................................................................................ATCAACAGCAGCA-----------------------------------------------------------------------------GCAGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101010000
.....................................................................................................................................C--AACAGC-----------------AT---CAGCAG-----C----------------------------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.061010000
......................................................................................................................................................................................................................................................................................................................CATCAACAGCAGCA-----------------------------------------------------------------------------GCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.061000010
........................................................................................................................................AACAGC-----------------AT---CAGCAG-----C----------------------------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.061010000
....................................................................................................................................................................CAGCAG-----C----------------------------AGCAGCA---------------A--------------CAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
.....................................................................................................................................................................................................................................................AA------CATCAGCAGC---------A---------------------------G------CAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
........................................................................................................................................................................AG-----C----------------------------AGCAGCA---------------A--------------CAGCAA------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..........................................................................................................................................CAGC-----------------AT---CAGCAG-----C----------------------------AGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
...........................................................................................................................................................................................................................................................................................................................ACAGCAGCA-----------------------------------------------------------------------------GCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
..........................................................................................................................................................................................................................................................................................................................AACAGCAGCA-----------------------------------------------------------------------------GCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
.......................................................................................................................................................................................................................................................................................................................ATCAACAGCAGCA-----------------------------------------------------------------------------GCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
.....................................................................................................................................................................................................................................................AA------CATCAGCAGC---------A---------------------------G------CAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
droBip1
CCCAGTGCGCCTATGTA---------------------CAA----------------------------------------------T-------------------A---ACAA---TAGTAGT-AG--CAAC--AGCAACC---ACAA-----------------CAACAA--CCAACAGGGCCAAGAAGTAACTACCTATTAACAACA---------------A--------C---------AACAACAACAAGAACAAG-----------------------------A-------A---------------CAGAATAAACAT------C--------------------------AA---------------------------------CACCGACA------------G------------------------------CTAACAGCAACA-------TTTAACACCAAACTGTAGAAAAATTACAAA-------------------------------------A-ACCAATCAC-----------------------------------------AAAGT---------------------------------------------------ATCCA--------------------------ATTCCG------------------------------------------------------------------------------------------------------------T------------------------AATCCG---------------------------------------------------------------------AA----TTCTGTTACCCTTCCGTTTTT-ATCSizeHit CountTotal NormTotal
No Reads
droKik1
CTGAGCGA---------------------------------------------------CC-------C--------ACAGCGCTTG-------------------------CAATATCTGCAGCA--------ACAGCAACTGCTGCAA--------AAGCAG---CAAC--AG-CA------------------------GCAGCAGCA---------------A--------------------------CAAC------------------------------------------AACAACAAATACTTATACAGCAGCAGCAAACTCCCC--------------------------AG---------------------------------CAGCAGCA------------GCC---------------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGATTCT------CCAACAGA---------AGTTACCAATCGACCCCCA---GCAACAAATCATGCAGCA-----------AG--------------------------------------TGTTG-------------------------------------------------------------------------------------------------------------------------------------------------------ATAACGCAGCAA---CAATTSizeHit CountTotal NormTotal
No Reads
droFic1
AGCAG---------------------------------CAA----------------------------------------------------------------------------------------------------CA---CG--AACAGCAACA------C--------C----------------------------AACAGCA---------------A--------CAGCAACAGCAG------CAGCAACATC------GTCAA-CAGCAACACGTGCCAGCAACAGC-AAT---------------AGCAAT--------------------------------------AGCAGTTGCAATGAC--AATATGGCAGTAA-----CA------------------ATT----TTTATACAGAT-GGTCTCGCACAGTTAGCGGCAGCA-------T--CATAAAAAGTTGCAGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGAAACAGCAA--------------------------------TT-AGCSizeHit CountTotal NormTotal
No Reads
droEle1
CAACA----------------------------------------------------------------------------------------------------------ACAA---CAGCAGC-AA--CAAC--AGCAGCA---GCAA--------CAACAA---CAAC--AG-CA------GCAGC------------AACAACAA--------------------------------------------CAACAGCAGC---------------------------------------AGCAACAACAACAGCAGCAGCAACAA------C--------------------------AA---------------------------------CAGCAGCA------------GCA---------------AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAGCAACAAC------AAGTCTTGGCTCAGCAACAACCTCAACCTGG----------------------------------------------------------------------------ACAACAAGTCATAACCCAGCGGCACGTCATTAACACATCCACAGCCCAAGGTCAACAAATCATTCAGAGCCA---------------------------------------------------------------------TA----TGTCTTTGGCCTTGCAAAAAC-AGCSizeHit CountTotal NormTotal
No Reads
droRho1
ACAA-----------------------------------------------------------------------------------C-------------------A---ACAG---CAGCAGC-AA--CAAC--AGCAGCA---GCAA-----------------CAACAG--C-A------------------------GCAACAGCA---------------A--------C---------AACAACAACAGCAGCAAC-----------------------------A-------G---------------CAACAACAACAA------C--------------------------AGCAGCTGCAACAAC---------------------------------------------------------------------------------------------------------------------AACATC-------------------------------------------------------------------------------------------------------------------------------------------AGGTCTTGGCACAGCAACAACCTCAGCCTGG----------------------------------------------------------------------------ACAACAAGTCATCACCCAGCGCCACGTTATAAACACATCTACGGCCCAAGGACAACAAATCATTCAGAGCCA---------------------------------------------------------------------TA----TGTCTTTAGCTTTGCAGAAAC-AGCSizeHit CountTotal NormTotal
No Reads
droBia1
TAAATG-----------------------------------------------------CC-------ATAGTCAAC--------AGCATTATGAACTCTGCCAAC------------CAGTACCA--------GCAG-------------------------------------C-A------------------------GCAGCAGCAGCAACAACAACAGCAGCATCAGCA-----A------------CACCAGCAGCA--------------------------------ATG-TA---------------------------------------------------------------GGTTCAA-AACACCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACTTGGCAATA--CTCAACGATG----------------------------------------------------------------------------ACAATCCTTCATTTTACAGCGG---------------------------------------------------------GTAACACACAAGGCAACAGC---------------AATG---CTGC-------AG---------------------------------TGCACSizeHit CountTotal NormTotal
No Reads
droTak1
GTTGGTGCTGG------------------------------TAGCGGT---AGTCAAGCAAA-------TAGTGTCA--------AGC-------------------A---TCTG---CAGAATA-AGCA----AAAGCAACA---AC--AACTACAGCA------G--------C----------------------------AACAGCA---------------A--------AAGCAACAACAA------CAACAGCAAC------CGCAA-CAGCAACAC------------------------------------------------------------------------------G---------------------------ATGTTGCAGCAGCA------------------------------------------------------------------ACA------------------ACAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CAAC-------------------------------------------------------------------------------------------------------A---GCAG---CAGCAGC-AA--CAAC--AGCAGCA---GCAA-----------------CAAC--AG-CA------------------------GCAG-----------------------------------------------CAGCAACAAC------CGCAG-CT-----------------------G------CTGCAACAACAACAGCA-----------------------------------------------------------------------------GCAGCAAC---------C---------------A--------------------------------------------------------------------------------------------------------ATC------------------------CAAGTTCAAAAGCAACCACAAATAATCTACC--------------------TGCAGCGAAAGCCAT------A-G---------------AG---------------------------TTTCAT-----------------------------------------TCCTCCAAACATAATA----------------------------AA---------------------------------------------------------AATAA--AC---------------AATA---AACTGACATGCAATTACCCTTT--------------------------TGTSizeHit CountTotal NormTotal
No Reads
dm3
CGGAAA-T------------------------------T---------AATGATTACTTCTTTTTAGCAA-----------------A-------------------T---ACAG---CAGCAA-----------------CA---AC--AACAACAACA------G--------C----------------------------AGCAGCA---------------G--------CAGCAACAACAA------CAGCAGCAGC------AAC---------------------------AACAGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCTGACGCAGCAACAGCCACAGCCTGGACAA------------------------------CAGCAACAA----------------------------------------GTCATCACTCAGCGCCATGTTATAAACACATCCACGGCTCAAGGACAACAAATCATTCAAAGTCA---------------------------------------------------------------------TA----TGTCTTTGGCCTTGCAGAAGC-AGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCGCCATGTTATAAACA.........................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACAACAAATCATTCAAAGT......................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------TA----TGTCTTTGGCCTTGCAGA.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGGACAACAAATCAT.............................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGGCCTTGCAGAAGC-A..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTCA---------------------------------------------------------------------TA----TGTCTTTGGCCTTGCA.........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGACAACAAATCATTCAAAGT......................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................C---------------------------AACAGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCTGACGCAGCAACA....................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA----------------------------------------GTCATCACTCAGCGCCATGTT................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------GTCATCACTCAGCGCCAT...................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCAGCAACAGCCACAGCCTG.........................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GAAC-------------------------------------------------------------------------------------------------------A---GCAA---CAGCAAC-AG--C----------------------------AA---CAGCAG-----C----------------------------AGCAGCA---------------A--------------CAGCAA------CAACAACAGC---------ATT-GGCA--------------------AC---------------A----------------------------------------------------------------------------------------------------------------------------------------------------TGCAACA------------------CCATTAT---------------------C---AACACACATTGACACACT----------------------------------------------------------------------------------------------------TTCCGCCGCGGTTGTTGTTGCATTTCCGGTGGTGTTGAAGTAAGCGTCC-----------GG--------------------------------------TTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAATT-GCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TAAAATGAAGA--ACATATATTATTTCTTACCGGAAATT---------AATTATTGCTTCTTTTTAGCAA-----------------A-------------------T---ACAG---CAGCAGC-AA--CAAC--AGCAGCA---GCAA-----------------CAAC--AG-CA------------------------ACAA-----------------------------------------------CAACAACAAC------------------------------------AACAGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCTGACGCAGCAACAACCACAGCCTGGACAA------------------------------CAGCAACAA----------------------------------------GTCATCACTCAGCGCCATGTTATAAACACATCCACGGCTCAAGGACAACAAATCATTCAAAGCCA---------------------------------------------------------------------TA----TGTCTTTGGCCTTACAGAAGC-AGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACACATCCACGGCTCAAGGA........................................................................................................................2411.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------GTCATCACTCAGCGCCATG..................................................................................................................................................2011.0010100
....................................................................................................................................................AA-----------------CAAC--AG-CA------------------------ACAA-----------------------------------------------CAACAACAAC------------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1711000
droYak3
TGCCACACCGA------------------------------CAGCAAC---CATCCCCGCCA-------CCAGCAGC--------AACA---GTAACACA-----------------------------------------------------------------------------------------------TTGCCCAGCAGCAACA---------------A--------C---------AACAACAACAACAACAGC-----------------------------A-------G---------------CAGCAGCAACAA------CTGCAACAGCAACCAAGTGCCAATACAAG-------------------------TGCCAATC---------------------------CT-G--------------------------------AGTGGAT-----------------------CACCGGGATC------------------------CAC-GTCGTCA-GCCAGTCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................C---------AACAACAACAACAACAGC-----------------------------A-------G---------------CAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29110.09101000000000
...........................................................................................................................................................................................................................................C---------AACAACAACAACAACAGC-----------------------------A-------G---------------CAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
...............................................................................................................................................................................................................................................................ACAACAGC-----------------------------A-------G---------------CAGCAGCAACAA------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
droEre2
ATGACG----A------------------------------CAACAAT---AAGCAAG--C-------AGGAGCAGC--------AGC-------------------A---GCAG---CAGCAGC-AGCA----GCAGCAACA---GCAG-----------------CAAC--AG-CA------------------------GCAGCAGCA---------------A--------------------------CAGC------------------------------------------AGCAGCAGCAACAGCAGCAGCAGCAGCAG------C--------------------------AG---------------------------------CAGCAGCA------------GCA---------------AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGCAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG------C--------------------------AG---------------------------------CAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2550000050
.......................................................AAG--C-------AGGAGCAGC--------AGC-------------------A---G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.1111000000
.............................................................................................................................................................................AG-CA------------------------GCAGCAGCA---------------A--------------------------CAGC------------------------------------------AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100
.....................................................................GGAGCAGC--------AGC-------------------A---GCAG---CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000
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..........................................................................................................................................................................C--AG-CA------------------------GCAGCAGCA---------------A--------------------------CAGC------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
......................................................................................................................................GCAGCAACA---GCAG-----------------CAAC--AG-CA------------------------GCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000
.......................................................................................................................................................................CAAC--AG-CA------------------------GCAGCAGCA---------------A--------------------------CAGC------------------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000010
..................................................................................................................................................GCAG-----------------CAAC--AG-CA------------------------GCAGCAGCA---------------A--------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0511000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------GCA---------------AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAG.................................................................................................................................................................................................................................................................................................20200.0510001000
...............................................................................................................................................................................................................................................................................................................................CAGCAGCAG------C--------------------------AG---------------------------------CAGCAGCA------------G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
...................................................................................................................................................CAG-----------------CAAC--AG-CA------------------------GCAGCAGCA---------------A--------------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000
...............................................................................................................................GCA----GCAGCAACA---GCAG-----------------CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000
.......................................................................................C-------------------A---GCAG---CAGCAGC-AGCA----GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
......................................................................................................................................GCAGCAACA---GCAG-----------------CAAC--AG-CA------------------------GCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100
.................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGCAGCAG------C--------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000010
.................................................................................................................................................................................................................CA---------------A--------------------------CAGC------------------------------------------AGCAGCAGCAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000010
.............................................................................................................................................................................................................................................................CAGC------------------------------------------AGCAGCAGCAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
..........................................................................................................................................................................................................GCAGCAGCA---------------A--------------------------CAGC------------------------------------------AGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000
.................................................................................................................................A----GCAGCAACA---GCAG-----------------CAAC--AG-CA------------------------GCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000000
.....................................................................................................................................................G-----------------CAAC--AG-CA------------------------GCAGCAGCA---------------A--------------------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..........................................................................................................................................................................................................GCAGCAGCA---------------A--------------------------CAGC------------------------------------------AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
..........................................................................................................................AGC-AGCA----GCAGCAACA---GCAG-----------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA------------GCA---------------AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGC...................................................................................................................................................................................................................................................................................................20200.0510000010

Generated: 05/17/2015 at 10:52 PM