ID:

dmo_684

 Coordinate:

scaffold_6473:5736948-5737098 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.4 -3.9 -3.8

Flybase annnotation

exon [dmoj_GLEANR_16290:2]; CDS [Dmoj\GI15562-cds]; intron [Dmoj\GI15562-in]

Repeatable elements

NameClassFamilyStrand
(TTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGCTCTCAACTCCGCCGCATACTCAGGTGCAGGAGATAACGCTGCGTGCGGTTGGCGAATGGTACTGATAGCGCTTATCAGCTGATATGAAGTGTGCACGTGCTTGAAGTTCTTGTTGTTCTTGTTGTTGTTGGTGTTATTGGTGTTGCTTAGGCTATGTAATCAACACCTAATAACAATCAAATGAACTTGACAACTCAATGCACAAACACACACACACACACTCAGACACATAAATACACACAAATAAA
**************************************************************************************...((((..((((..((..(((..........)))..)).................)))).))))**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V049
head
 M060
embryo
.................................................................................................................................................................................AATCAAATGAACTTGACAACTCAATGCAC............................................. 29 0 1 5.00 5 5 0 0 0
.............................................................................................................................TGTTGTTGGTGTTATTGGTGTTGCTT.................................................................................................... 26 0 1 3.00 3 1 2 0 0
......................................................................................ATGAAGTGTGCACGTGCTT.................................................................................................................................................. 19 0 1 3.00 3 3 0 0 0
.............................................................................................................................TGTTGTTGGTGTTATTGGT........................................................................................................... 19 0 1 2.00 2 1 1 0 0
..............................................................................................................................GTTGTTGGTGTTATTGGT........................................................................................................... 18 0 1 2.00 2 2 0 0 0
.....................................................................................................................................................................................AAATGAACTTGACAACTCA................................................... 19 0 1 2.00 2 2 0 0 0
.................................................................................................................................................................................AATCAAATGAACTTGACAACTCAATGCA.............................................. 28 0 1 2.00 2 2 0 0 0
.....................................................................AGCGCTTATCAGCTGATATGAAGTGT............................................................................................................................................................ 26 0 1 2.00 2 1 1 0 0
........................................................................................................................................................................................TGAACTTGACAACTCAATGCACAAACAC....................................... 28 0 1 2.00 2 2 0 0 0
...................................................................................................................................................................................................................................GACACATAAATACACACAAAT... 21 0 1 1.00 1 1 0 0 0
...............................................................................................................................TTGTTGGTGTTATTGGTGT......................................................................................................... 19 0 1 1.00 1 1 0 0 0
...................................................................................GATATGAAGTGTGCACGTGCTT.................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0
.............................................................................................................................TGTTGTTGGTGTTATTGGTGTTG....................................................................................................... 23 0 1 1.00 1 0 1 0 0
..................................................................................................................GTTGTTCTTGTTGTTGTTGGTGTT................................................................................................................. 24 0 1 1.00 1 1 0 0 0
..................................................................................................................................TTGGTGTTATTGGTGTTGCTTAA.................................................................................................. 23 1 1 1.00 1 0 0 1 0
.......................................................................................................................................................ATGCTATGTAATCAACACCTAATAAC.......................................................................... 26 1 1 1.00 1 0 0 0 1
...............................................................................................GCACGTGCTTGAAGTTCT.......................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
...................................ATAACGCTGCGTGCGGTTGGC................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...............................................................................................GCACGTGCTTGAAGTTCTTGTT...................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
.....................................AACGCTGCGTGCGGTTGGC................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
..................................................................................................................................................TGCTTAGGCTATGTAATCAACAC.................................................................................. 23 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................TGAACTTGACAACTCAATGCAC............................................. 22 0 1 1.00 1 1 0 0 0
...............................................................................................................................TTGTTGGTGTTATTGGTGTTGCTTAGA................................................................................................. 27 1 1 1.00 1 0 0 1 0
...................................................................................GATATGAAGTGTGCACGTGCTTGAAGT............................................................................................................................................. 27 0 1 1.00 1 1 0 0 0
.....................................................................................................................GTTCTTGTTGTTGTTGGTGTTATTG............................................................................................................. 25 0 1 1.00 1 0 1 0 0
..................................GATAACGCTGGGTGCGGTTGGC................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0
............CGCCGCGTACTCAGGTGCAG........................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0
.......................................................CGAATGGTACTGATAGCGCT................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
......................................................................................................CTTGAAGTTCTTGTTGTTCTTGT.............................................................................................................................. 23 0 1 1.00 1 1 0 0 0
......CAACTCCGCCGCATACTCAGGT............................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
...............................................................................AGCTGATATGAAGTGTGCACGTGCTT.................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0
.............................................................................................................................TGTTGTTGGTGTTATTGGTGTT........................................................................................................ 22 0 1 1.00 1 1 0 0 0
.....................................................................AGCGCTTATCAGCTGATATGA................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.........................................................................................................GAAGTTCTTGTTGTTCTTGTTG............................................................................................................................ 22 0 1 1.00 1 1 0 0 0
.....................................................GGCGAATGGTACTGATAGC................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................TGTAATCAACACCTAATAACAATC...................................................................... 24 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................GAACTTGACAACTCAATGCACAAAC......................................... 25 0 1 1.00 1 1 0 0 0
...................................ATAACGCTGCGTGCGGTTGGCGAATG.............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................AGGCTATGTAATCAACACCTAAT............................................................................. 23 0 1 1.00 1 1 0 0 0
.............................................................................................GTGCACGTGCTTGAAGTTCTTGT....................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...................................TTAACGCTGCGTGCGGTTGGC................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................GCACAAACACACACACACACACTCAGACA.................... 29 0 1 1.00 1 1 0 0 0
........................................................................................................................CTTGTTGTTGTTGGTGTTATTGGTGTTGC...................................................................................................... 29 0 1 1.00 1 0 1 0 0
........................................................................................................................................................................................TGAACTTGACAACTCAATGCACAA........................................... 24 0 1 1.00 1 1 0 0 0
.......................CAGGTGCAGGAGATAACGCTGC.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0
....................................TAACGCTGCGTGCGGTTGGCG.................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.........................................................................................................GAAGTTCTTGTTGTTCTTGTTGT........................................................................................................................... 23 0 1 1.00 1 0 1 0 0
........................................................GAATGGTACTGATAGCGCTTAT............................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0
....................................................................................ATATGAAGTGTGCACGTGCTT.................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0
.............................CAGGAGATAACGCTGCGTGCGGTTGGC................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
........................................................................................GAAGTGTGCACGTGCTTGAAGT............................................................................................................................................. 22 0 1 1.00 1 0 1 0 0
.................................AGATAACGCTGCGTGCGGTTGGC................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.......................................................CGAATGGTACTGATAGCGC................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
............................................................................ATCAGCTGATATGAAGTGT............................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0
............................................CGTGCGGTTGGCGAATGGT............................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0
..............................AGGAGATAACGCTGCGTGCGGTTGG.................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................AACTTGACAACTCAATGCAC............................................. 20 0 1 1.00 1 1 0 0 0
.............................................................................................................................TGTTGTTGGTGTTATTGGTGT......................................................................................................... 21 0 1 1.00 1 0 1 0 0
.................................................................................CTGATATGAAGTGTGCACGTG..................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................................CTAATAACAATCAAATGAACT............................................................. 21 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................CTAATAACAATCAAATGAACTTG........................................................... 23 0 1 1.00 1 0 1 0 0
.................................................................................................................................................................................AATCAAATGAACTTGACAACTC.................................................... 22 0 1 1.00 1 1 0 0 0
.............................CAGGAGATAACGCTGCGTGCGGT....................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0
................................................................................................CACGTGCTTGAAGTTCTTGT....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................AACTTGACAACTCAATGCACAAA.......................................... 23 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................AGGCTATGTAATCAACACCTAATAAC.......................................................................... 26 0 1 1.00 1 1 0 0 0
.......................................................................................TGAAGTGTGCACGTGCTTGAA............................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
.............................................................................................................................TGTTGTTGGTGTTATTGGTGTTGCT..................................................................................................... 25 0 1 1.00 1 1 0 0 0
................................................................................................................................CGTTGGTGTTATTGGTGTTGCTTAGGCTA.............................................................................................. 29 1 1 1.00 1 1 0 0 0
.............................................................GTACTGATAGCGCTTATCAGC......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
................................................................................................................................................GTTGCTTAGGCTATGTAATCAACAC.................................................................................. 25 0 1 1.00 1 1 0 0 0
....................................TAACGCTGCGTGCGGTTGGCGAATG.............................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0
.....................................................GGCGAATGGTACTGATAGCGC................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.....................................AACGCTGCGTGCGGTTGGCGAATGGTA........................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
..............................................................................CAGCTGATATGAAGTGTGCACGT...................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.................................AGATAACGCTGCGTGCGGTT...................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.....................................AACGCTGCGTGCGGTTGGCG.................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0
.........................................................................................................................................................................................GAACTTGACAACTCAATGCACAAACACAC..................................... 29 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................................CTCAGACACATAAATACACACA...... 22 0 1 1.00 1 1 0 0 0
...................................................................................GATATGAAGTGTGCACGTGCTTGAAGTT............................................................................................................................................ 28 0 1 1.00 1 0 1 0 0
.........................................CTGCGTGCGGTTGGCGAATGGTACTG........................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0
...............................................................................................................................TTGTTGGTGTTATTGGTGTTGCTTAG.................................................................................................. 26 0 1 1.00 1 0 0 1 0
...............................................................................................................................................................................................................................CTCAGACACATAAATACACACAA..... 23 0 1 1.00 1 1 0 0 0
...........CCGCCGCATACTCAGGTGCAGGA......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...............................GGAGATAACGCTGCGTGCGGTTGGC................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0
...............................................................................................................................................................................................GACAACTCAATGCACAAACACA...................................... 22 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................ACACACACACACACTCAGACACATAA............... 26 0 1 1.00 1 1 0 0 0
........................................................GAATGGTACTGATAGCGCT................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0
.............................................................................................................................................................TGTAATCAACACCTAATAAC.......................................................................... 20 0 1 1.00 1 1 0 0 0
............................................................................ATCAGCTGATATGAAGTGTGCA......................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
....................................TAACGCTGCGTGCGGTTGGCGAATGG............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
..................................................................................TGATATGAAGTGTGCACGTGCTT.................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
.....................................AACGCTGCGTGCGGTTGGCGA................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................AATCAAATGAACTTGACAACTCAATG................................................ 26 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................TATGTAATCAACACCTAAT............................................................................. 19 0 1 1.00 1 1 0 0 0
..................................................................GATAGCGCTTATCAGCTGATATGAAGTG............................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................ACACACACACACTCAGACACATAAAT............. 26 0 1 1.00 1 1 0 0 0
....................................................................................ATATGAAGTGTGCACGTGCTTGAAGA............................................................................................................................................. 26 1 1 1.00 1 0 1 0 0
..................................................GTTGGCGAATGGTACTGATAGCGCTT............................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
................................................................................................................................................GTTGCTTAGGCTATGTAATC....................................................................................... 20 0 1 1.00 1 1 0 0 0
..................................................................................................................GTTGTTCTTGTTGTTGTTGGT.................................................................................................................... 21 0 6 0.17 1 0 1 0 0
.....................................................................................................................GTTCTTGTTGTTGTTGGT.................................................................................................................... 18 0 14 0.14 2 2 0 0 0

Anti-sense strand reads

GCGAGAGTTGAGGCGGCGTATGAGTCCACGTCCTCTATTGCGACGCACGCCAACCGCTTACCATGACTATCGCGAATAGTCGACTATACTTCACACGTGCACGAACTTCAAGAACAACAAGAACAACAACAACCACAATAACCACAACGAATCCGATACATTAGTTGTGGATTATTGTTAGTTTACTTGAACTGTTGAGTTACGTGTTTGTGTGTGTGTGTGTGAGTCTGTGTATTTATGTGTGTTTATTT
****************************************************************************************************...((((..((((..((..(((..........)))..)).................)))).))))************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V049
head
 V056
head
 M046
female body
...................................................................................................................................................................GTTGTGGATTATTGTTAGTTT................................................................... 21 0 1 1.00 1 0 1 0
.................................................................................................................................................................TAGTTGTGGATTAGTGTTAGTTT................................................................... 23 1 1 1.00 1 1 0 0
...........................................................................................................................................................AAACAGCAGTTGTGGATTA............................................................................. 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:5736898-5737148 + dmo_684 CGCTCTC-AACTCCGCCGCATACTCAGGTGCAGGAGATAACGCTGCGTGCGGTTGGCGAATGGTACTGATAGCG-------------------------C--TTA--TCAG---------------CTG-----------------ATA-----TGAAG---TGTGCACGTGCTTGAAGTTCTTGTTGTT---CTTG-TTGTTGTTGGTGTTATTGGTGTTG------------------------------------------------------------CTTAG-----GCTATGTAATCAAC----------AC-CTAATAACAATCAAATGAACTT------------GA--------------C----------AACTCA---ATG--CACAAACACACA--------CACACACACTCAGACACATA--AATACACACAAATAA---A
droVir3 scaffold_12726:2745197-2745422 - CTCTCTC-CACGCCGCCGCATGCCCAGGTGCAGGAGATAACGCTTCGGGCTGTTGGGGAATGGTACTGATAAGCG-----------------------------------------------------------------------CTA-----TGAAG---TACGCACGTGTTTTTGGTTGTTGTAGTTGGTTGTTATTGCTGCTGTTGTTGTTGTTATTA------------------------------------------------------------TTGAG-----GGAATGTATTCAAC----------AC-CTAATAACAATCAAATGAACGC--------------------------AACGACTCG-------------AC----------------------------GCACACGCACCCACA--CACACACACACA-GC---A
droGri2 scaffold_15203:6355779-6356006 - CCCTCTC-TACCCCGCCGCACGCCCAAGTCCAGGAGATAACGCTTCGTGCAGTTGGAGAATGGTACTGATAAGCG-----------------------------------------------------------------------ATG-----TGAAG---TTCGCACGTGTTTGCAGTTGTTGCCAGT---GTCGATGTCTATTGCTGGCATTAGGGTTG------------------------------------------------------------TTCAA-----GCGATGTTATCAAC----------AC-ATAATAATAATCAAATCAGCGC--------------------------AACGACTCTCT-------------------------------------CTTTCTCTCACTCTACCTA--TCTATCTCTATCTAG---C
droWil2 scf2_1100000004963:824276-824534 + CCCTGTC-GACTCCACCACATGCCCAGGTGGAACAGATAACATTACGGGCTGTGGGTGAATACTTTTAATAATGAA--------------------------CAG---A---------------------------CAGCAAAACATAA-----CAAGG---AACCAACCAATCAATGGCAAATAATAATAATACTAAAAATAATAATAACGAATAACAACA------------------------------------------------------------GTGAA-----GCCAAGTAATCAAC----------AC-TTAATAACAATCAAGTAAAAAC-------------------AC-------A----------------AACACAACCACACACACACA--------CACACACACACACACACACA--CACACACACACACAC---A
dp5 3:693513-693671 - TGATGTC-GTTGTCGTTGTCGTTGTTTTTGCTGTTGTTGTTGTTGTTGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG-----TCATAAGTGCGTAGGCCAAAACGGACATGGCCTGT-------------------------------------------------------------------------T------------GA--------------C----------ATCTCC---ACA--CACAGGCACACACACACACACACAGGCACACAGATGGGTTCTTATATGAATAGGTAA---T
droPer2 scaffold_13:425921-426167 + CCCTCTC-CACGCCGCCCCATGCCCAGGTGGAGCAGATAACGCTGCGAGCCGTTGGCGAATACTTTTGATAAGAGAGC--ACCCCACCGCCCCCCCCTCCAGAT--AACAGATTAAACAAA------------------------------------GC---CCCACACCACCCCGTAGTGGCTG---------------------------------------------------------------------------------------------------TAA-----GCACTGTAATCGAC----------AC-TCATTGGCAATCAAATGAGAGAGAGC-------AATGAGAGGG--GGAAACGACCT---------------------------CAGA--------TACAGATACAGATACAGATA--CAGACATTCAAGTGG---G
droAna3 scaffold_13047:695406-695659 - CCCTTGC-CACGCCCCCGCACGCCCAGGTGGAGCAGATAACACTGCGGGCGGTGGGCGAGTACTTCTGATTCTGTTCTGA-----------------TTCTG--ATT-GC---------------GATTCGACTTTCGG----------CGATAAGAAGAGGCCCCGGAAGATTA--GGTGGCTG-----------------------------GAAGATAG--------------------------------------------------------------TAG-----GCCGAGCAATCGAC----------AC--GAATGCCAATCAATTGAAGGG-------------------------GAACGACCTGAGCA------AACACT--CCCACAACCACG--------CACACACACTACACCACACA-CTATACACACCAGCAC---A
droBip1 scf7180000396660:10525-10614 + ATGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------AT-AAAAAAAAAAAAAAAAAAAAAT------------AA------C------------------ACATAC---ACA--TACACATACACA--------TACACATACACATACACATA--CACATACACATACAC---A
droKik1 scf7180000302698:222213-222407 + CCTTGGC-CACCCCACCGCATGCCCAGGTGGAGCAGATAACGCTGAGGGCGGTGGGCGAGTACTACTGATACCC-------------------------T--TAG---C---------------------------T---------------------------------------------------------------------------------------AGC--------------------------CAGATATCGCCTACTGATAAAGCCAGCTCCTCAGATT-----AGGCCATTGAC----------AC-ACAATAACAATCAAATGGAGGC-------------------------GAACGACCTACA----------------------A--------------------ACATACACACACA--CACACACAATCA-AA---A
droFic1 scf7180000453829:835692-835930 - CCCTCTC-GACGCCGCCGCATACGCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGATAGCCG---------------------------AT--AACCGAT-AACCAATACCCGATAGCC------G----------------------------------------------------CTTGAT--------------------------------------------------------------------------AACG-CAGCCCCCGCGATT-----AGACCATCGACATTCACAATAAC-CAAATAACAATCAAATGAAAGG-------------------------AAACGACCTGTC--C--CAA---ACA--CC--CAAACACA--------TACTTACACTTTAACACACA--GATACATTCACACACAAGA
droEle1 scf7180000491006:2367774-2367961 - CCCTGTC-GACGCCACCACACACCCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGATAACG-------------------------A--CGG--AAC---------------GATGGC-----------------ACGAT----AA---TG-------------------------------------------------------------------------------------------------------------CG-CAGCCCCCGAGATTAGGCAATCGAATCGAC----------TC-ACAATAACAATCAAATGAAGGGAAACGAAACGAAATGAAACGAAACGAAACGACCT--------------------------------------------------------------------------GC---A
droRho1 scf7180000779841:376657-376827 - CCCTATC-GACCCCGCCCCACGCCCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGATACT-------------------------TCTG--ATA-GC---------------GATGGCA------G----------CGAT----------------------------------------------------------------------------------------------------------------------AACG-CAGCCCCCGAGATT-----AGGCAATCGAC----------TC-GCCATGACAATCAAATGAAGGG-------------------------AAACGACCTGCA----------------------C--------------------ACACACACACAC----------------------
droBia1 scf7180000301760:2594524-2594611 - CCCTGTC-GACGCCGCCGCACACGCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGACGCCC-------------------------CTG--ATA-CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGAT---A
droTak1 scf7180000415169:1057871-1057939 + CCCTATC-GACGCCGCCGCACACCCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409524:743426-743516 + AAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAATAAAT-ATTGAAATAACATTTATTTGC-------------------------------------------------AACACA--CACACACACACA--------CACACACACACACACACACA--CACACACACACACAC---A
dm3 chr3L:22887344-22887430 + AAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-CAGATAAAAGTTGCTTGGATAT------------TG------C------------------AAACAA---ACA--CACACACACACA--------CACACACACACACACACACA--CACACACACACACAC---A
droSim2 x:8416743-8416814 - CCCTATC-CACGCCGCCGCACACACAGGTGGAGCAGATAACGCTGAGGGCGGTGGGCGAGTACTTCTGATAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_34:229702-229773 - CCCTATC-CACGCCGCCGCACACACAGGTGGAGCAGGTAACGCTGAGGGCGGTGGGCGAGTACTTCTGATAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:7253236-7253361 + TTCTTGT-TGTTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCAGTGCTTATATTTTATTTC-----ATGCCAACAGCA-------CTGT-TTAATTACACACAAAAGA---C---------------------------------------------AACACA--CCCACACACACA--------CACACACACACACACACACA--CACAAACACACACAC---A
droEre2 scaffold_4845:6032434-6032568 - TTTTTGTTCAAGTTATTATT-----------------------------------------------GTTATT-------------------------------------------------------------------------------------------------------------------------------------------ATTTAATTACTTACAGCTATACA----------------------------------------------------------------------T----------AC-GTACATACGTACATACGGACAT------------AC-----AT------------------ACATAC---ATA--CATACATACATA--------CATACATACATACATACATA--CATACATACATACAT---A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CGCTCTC-AACTCCGCCGCATACTCAGGTGCAGGAGATAACGCTGCGTGCGGTTGGCGAATGGTACTGATAGCG-------------------------C--TTA--TCAG---------------CTG-----------------ATA-----TGAAG---TGTGCACGTGCTTGAAGTTCTTGTTGTT---CTTG-TTGTTGTTGGTGTTATTGGTGTTG------------------------------------------------------------CTTAG-----GCTATGTAATCAAC----------AC-CTAATAACAATCAAATGAACTT------------GA--------------C----------AACTCA---ATG--CACAAACACACA--------CACACACACTCAGACACATA--AATACACACAAATAA---ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................AATCAAATGAACTT------------GA--------------C----------AACTCA---ATG--CAC..........................................................2915.005500000
.......................................................................................................................................................................................................TGTTGTTGGTGTTATTGGTGTTG------------------------------------------------------------CTT..........................................................................................................................................................................2613.003100002
....................................................................................................................................................A-----TGAAG---TGTGCACGTGCTT........................................................................................................................................................................................................................................................................................1913.003300000
.......................................................................................................................................................................................................TGTTGTTGGTGTTATTGGT.............................................................................................................................................................................................................................................1912.002100001
........................................................................................................................................................................................................GTTGTTGGTGTTATTGGT.............................................................................................................................................................................................................................................1812.002200000
...........................................................................................................................................................................................................................................................................................................................................AAATGAACTT------------GA--------------C----------AACTCA---..................................................................1912.002200000
.......................................................................................................................................................................................................................................................................................................................................AATCAAATGAACTT------------GA--------------C----------AACTCA---ATG--CA...........................................................2812.002200000
......................................................................AGCG-------------------------C--TTA--TCAG---------------CTG-----------------ATA-----TGAAG---TGT..................................................................................................................................................................................................................................................................................................2612.002100001
..............................................................................................................................................................................................................................................................................................................................................TGAACTT------------GA--------------C----------AACTCA---ATG--CACAAACAC....................................................2812.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACACATA--AATACACACAAAT......2111.001100000
.........................................................................................................................................................................................................TTGTTGGTGTTATTGGTGT...........................................................................................................................................................................................................................................1911.001100000
................................................................................................................................G-----------------ATA-----TGAAG---TGTGCACGTGCTT........................................................................................................................................................................................................................................................................................2211.001000001
.......................................................................................................................................................................................................TGTTGTTGGTGTTATTGGTGTTG------------------------------------------------------------.............................................................................................................................................................................2311.001000001
........................................................................................................................................................................................GTTGTT---CTTG-TTGTTGTTGGTGTT...................................................................................................................................................................................................................................................2411.001100000
............................................................................................................................................................................................................TTGGTGTTATTGGTGTTG------------------------------------------------------------CTTAA-----...................................................................................................................................................................2311.001001000
.....................................................................................................................................................................GCACGTGCTTGAAGTTCT................................................................................................................................................................................................................................................................................1811.001100000
....................................ATAACGCTGCGTGCGGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................GCACGTGCTTGAAGTTCTTGTT............................................................................................................................................................................................................................................................................2211.001000001
......................................AACGCTGCGTGCGGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................TG------------------------------------------------------------CTTAG-----GCTATGTAATCAAC----------AC-........................................................................................................................................2311.001100000
..............................................................................................................................................................................................................................................................................................................................................TGAACTT------------GA--------------C----------AACTCA---ATG--CAC..........................................................2211.001100000
.........................................................................................................................................................................................................TTGTTGGTGTTATTGGTGTTG------------------------------------------------------------CTTAG-----A..................................................................................................................................................................2711.001001000
................................................................................................................................G-----------------ATA-----TGAAG---TGTGCACGTGCTTGAAGT...................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................GTT---CTTG-TTGTTGTTGGTGTTATTG...............................................................................................................................................................................................................................................2511.001000001
........................................................CGAATGGTACTGATAGCG-------------------------C--T................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................................................................................................................................................................CTTGAAGTTCTTGTTGTT---CTTG-T................................................................................................................................................................................................................................................................2311.001100000
......C-AACTCCGCCGCATACTCAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............................................................................................................AG---------------CTG-----------------ATA-----TGAAG---TGTGCACGTGCTT........................................................................................................................................................................................................................................................................................2611.001000001
.......................................................................................................................................................................................................TGTTGTTGGTGTTATTGGTGTT..........................................................................................................................................................................................................................................2211.001100000
......................................................................AGCG-------------------------C--TTA--TCAG---------------CTG-----------------ATA-----TGA..........................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................GAAGTTCTTGTTGTT---CTTG-TTG..............................................................................................................................................................................................................................................................2211.001100000
......................................................GGCGAATGGTACTGATAGC..............................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................TGTAATCAAC----------AC-CTAATAACAATC............................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................GAACTT------------GA--------------C----------AACTCA---ATG--CACAAAC......................................................2511.001100000
....................................ATAACGCTGCGTGCGGTTGGCGAATG.........................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................................................................................................................AG-----GCTATGTAATCAAC----------AC-CTAAT...................................................................................................................................2311.001100000
...................................................................................................................................................................GTGCACGTGCTTGAAGTTCTTGT.............................................................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................G--CACAAACACACA--------CACACACACTCAGACA.........................2911.001100000
.................................................................................................................................................................................................CTTG-TTGTTGTTGGTGTTATTGGTGTTG------------------------------------------------------------C............................................................................................................................................................................2911.001000001
..............................................................................................................................................................................................................................................................................................................................................TGAACTT------------GA--------------C----------AACTCA---ATG--CACAA........................................................2411.001100000
........................CAGGTGCAGGAGATAACGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.....................................TAACGCTGCGTGCGGTTGGCG.............................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................GAAGTTCTTGTTGTT---CTTG-TTGT.............................................................................................................................................................................................................................................................2311.001000001
.........................................................GAATGGTACTGATAGCG-------------------------C--TTA--T...........................................................................................................................................................................................................................................................................................................................................................2211.001000001
..................................................................................................................................................ATA-----TGAAG---TGTGCACGTGCTT........................................................................................................................................................................................................................................................................................2111.001000001
..............................CAGGAGATAACGCTGCGTGCGGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...........................................................................................................................................................GAAG---TGTGCACGTGCTTGAAGT...................................................................................................................................................................................................................................................................................2211.001000001
..................................AGATAACGCTGCGTGCGGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................CGAATGGTACTGATAGCG-------------------------C--.................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................A--TCAG---------------CTG-----------------ATA-----TGAAG---TGT..................................................................................................................................................................................................................................................................................................1911.001000001
.............................................CGTGCGGTTGGCGAATGGT.......................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................AGGAGATAACGCTGCGTGCGGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................................................................................................................................................................................................................................................................................................................................AACTT------------GA--------------C----------AACTCA---ATG--CAC..........................................................2011.001100000
.......................................................................................................................................................................................................TGTTGTTGGTGTTATTGGTGT...........................................................................................................................................................................................................................................2111.001000001
..............................................................................................................................CTG-----------------ATA-----TGAAG---TGTGCACGTG...........................................................................................................................................................................................................................................................................................2111.001000001
...............................................................................................................................................................................................................................................................................................................................CTAATAACAATCAAATGAACT...................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................CTAATAACAATCAAATGAACTT------------G.....................................................................................................2311.001000001
.......................................................................................................................................................................................................................................................................................................................................AATCAAATGAACTT------------GA--------------C----------AACTC......................................................................2211.001100000
..............................CAGGAGATAACGCTGCGTGCGGT..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
......................................................................................................................................................................CACGTGCTTGAAGTTCTTGT.............................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................................................................................................................................................................................................................AACTT------------GA--------------C----------AACTCA---ATG--CACAAA.......................................................2311.001100000
.............................................................................................................................................................................................................................................................................................AG-----GCTATGTAATCAAC----------AC-CTAATAAC................................................................................................................................2611.001100000
..........................................................................................................................................................TGAAG---TGTGCACGTGCTTGAA.....................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................TGTTGTTGGTGTTATTGGTGTTG------------------------------------------------------------CT...........................................................................................................................................................................2511.001100000
..............................................................GTACTGATAGCG-------------------------C--TTA--TCAG---------------C........................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................GTTG------------------------------------------------------------CTTAG-----GCTATGTAATCAAC----------AC-........................................................................................................................................2511.001100000
.....................................TAACGCTGCGTGCGGTTGGCGAATG.........................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
......................................................GGCGAATGGTACTGATAGCG-------------------------C--.................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................AACGCTGCGTGCGGTTGGCGAATGGTA......................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............................................................................................................CAG---------------CTG-----------------ATA-----TGAAG---TGTGCACGT............................................................................................................................................................................................................................................................................................2311.001100000
..................................AGATAACGCTGCGTGCGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................................AACGCTGCGTGCGGTTGGCG.............................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
...............................................................................................................................................................................................................................................................................................................................................GAACTT------------GA--------------C----------AACTCA---ATG--CACAAACACAC..................................................2911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGACACATA--AATACACACA.........2211.001100000
................................................................................................................................G-----------------ATA-----TGAAG---TGTGCACGTGCTTGAAGTT..................................................................................................................................................................................................................................................................................2811.001000001
..........................................CTGCGTGCGGTTGGCGAATGGTACTG...................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.........................................................................................................................................................................................................TTGTTGGTGTTATTGGTGTTG------------------------------------------------------------CTTAG-----...................................................................................................................................................................2611.001001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGACACATA--AATACACACAA........2311.001100000
............CCGCCGCATACTCAGGTGCAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................GGAGATAACGCTGCGTGCGGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.................................................................................................................................................................................................................................................................................................................................................................GA--------------C----------AACTCA---ATG--CACAAACACA...................................................2211.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACACA--------CACACACACTCAGACACATA--A..................2611.001100000
.........................................................GAATGGTACTGATAGCG-------------------------C--T................................................................................................................................................................................................................................................................................................................................................................1911.001000001
........................................................................................................................................................................................................................................................................................................TGTAATCAAC----------AC-CTAATAAC................................................................................................................................2011.001100000
........................................................................................................A--TCAG---------------CTG-----------------ATA-----TGAAG---TGTGCA...............................................................................................................................................................................................................................................................................................2211.001000001
.....................................TAACGCTGCGTGCGGTTGGCGAATGG........................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...............................................................................................................................TG-----------------ATA-----TGAAG---TGTGCACGTGCTT........................................................................................................................................................................................................................................................................................2311.001100000
......................................AACGCTGCGTGCGGTTGGCGA............................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................AATCAAATGAACTT------------GA--------------C----------AACTCA---ATG--.............................................................2611.001100000
......................................................................................................................................................................................................................................................................................................TATGTAATCAAC----------AC-CTAAT...................................................................................................................................1911.001100000
...................................................................GATAGCG-------------------------C--TTA--TCAG---------------CTG-----------------ATA-----TGAAG---TG...................................................................................................................................................................................................................................................................................................2811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................ACA--------CACACACACTCAGACACATA--AAT................2611.001100000
..................................................................................................................................................ATA-----TGAAG---TGTGCACGTGCTTGAAGA...................................................................................................................................................................................................................................................................................2611.001000001
...................................................GTTGGCGAATGGTACTGATAGCG-------------------------C--TT...............................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................................................................................................................................................................................GTTG------------------------------------------------------------CTTAG-----GCTATGTAATC........................................................................................................................................................2011.001100000
........................................................................................................................................................................................GTTGTT---CTTG-TTGTTGTTGGT......................................................................................................................................................................................................................................................2160.171000001
...........................................................................................................................................................................................GTT---CTTG-TTGTTGTTGGT......................................................................................................................................................................................................................................................18140.142200000
droVir3
CTCTCTC-CACGCCGCCGCATGCCCAGGTGCAGGAGATAACGCTTCGGGCTGTTGGGGAATGGTACTGATAAGCG-----------------------------------------------------------------------CTA-----TGAAG---TACGCACGTGTTTTTGGTTGTTGTAGTTGGTTGTTATTGCTGCTGTTGTTGTTGTTATTA------------------------------------------------------------TTGAG-----GGAATGTATTCAAC----------AC-CTAATAACAATCAAATGAACGC--------------------------AACGACTCG-------------AC----------------------------GCACACGCACCCACA--CACACACACACA-GC---ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................AATCAAATGAACGC--------------------------AACGACTCG-------------A.................................................................2412.002000100000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GTTGTTATTA------------------------------------------------------------TTGAG-----GGAATGT............................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000001010
....................................................................................................................................................................................................................................................................................................................................AACAATCAAATGAACGC--------------------------AAC.....................................................................................2012.002001000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................CGCACGTGTTTTTGGTTGT................................................................................................................................................................................................................................................................................1912.002001000000000000000000000000000000000000000000000000000000000010
........CACGCCGCCGCATGCCCAGGTGCAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GACTCG-------------AC----------------------------GCACACGCACCCACA--...................2311.001000100000000000000000000000000000000000000000000000000000000000
.........................................GCTTCGGGCTGTTGGGGAATGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................GTTGTTGTTGTTATTA------------------------------------------------------------TTGAG-----GG.................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................GACTCG-------------AC----------------------------GCACACGCACCC........................2011.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................AGCG-----------------------------------------------------------------------CTA-----TGAAG---TACGCA...............................................................................................................................................................................................................................................................................................1811.001000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ATTA------------------------------------------------------------TTGAG-----GGAATGTATTC........................................................................................................................................................2011.001000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................A-----TGAAG---TACGCACGTGTTT........................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................AGCG-----------------------------------------------------------------------CTA-----TGAAG---TACGCACGT............................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AATGAACGC--------------------------AACGACTCG-------------AC----------------------------GC..................................2211.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GTTGTTATTA------------------------------------------------------------TTGAG-----GGAAT..............................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AATAACAATCAAATGAACGC--------------------------AAC.....................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...........................................................ATGGTACTGATAAGCG-----------------------------------------------------------------------CTA-----TGAA.........................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GTTATTA------------------------------------------------------------TTGAG-----GGAATGTATTC........................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AACGC--------------------------AACGACTCG-------------AC----------------------------GCACACGCACC.........................2711.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TAATAACAATCAAATGAACGC--------------------------AAC.....................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTAGTTGGTTGTTATTGCTGCTGTT......................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
............CCGCCGCATGCCCAGGTGCAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
.........................................GCTTCGGGCTGTTGGGGA............................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTAGTTGGTTGTTATTGCTGCT.........................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.....................................TAACGCTTCGGGCTGTTGGGG.............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GTTATTA------------------------------------------------------------TTGAG-----GGAATGTAT..........................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................ATGAACGC--------------------------AACGACTCG-------------AC----------------------------GCC.................................2211.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TGGTTGTTATTGCTGCTGTTGTTGTTGTT.............................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................GTACTGATAAGCG-----------------------------------------------------------------------CTA-----TGAAG---T....................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................TGGGGAATGGTACTGATAAGC.............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GCACGTGTTTTTGGTTGTT...............................................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................A------------------------------------------------------------TTGAG-----GGAATGTATTCAAC----------AC-........................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.............................................................GGTACTGATAAGCG-----------------------------------------------------------------------CTA-----TGAAG---T....................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TGTTGTTGTTATTA------------------------------------------------------------TTGAG-----GGA................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
......................................AACGCTTCGGGCTGTTGGGGA............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATCAAATGAACGC--------------------------AACGACTCG-------------AC----------------------------GC..................................2711.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CGACTCG-------------AC----------------------------GCACACGCACCC........................2111.001000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ATGAACGC--------------------------AACGACTCG-------------AC----------------------------GCA.................................2211.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TATTA------------------------------------------------------------TTGAG-----GGAATGTATTCAAC----------AC-CT......................................................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................TGTTGTAGTTGGTTGTTATTGCTGCT.........................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCACCCACA--CACACACACA.........22170.295001000000000001100000000001010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACA--CACACACACACA-GC---.2060.171000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCACCCACA--CACACACAC..........21190.163001000000000000000000000100000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCACCCACA--CACACACA...........20200.153000000000000000000000000010010001000000000000000000000000000000
..................................................................................................................................................................................................GTTATTGCTGCTGTTGTTGTTGTT.............................................................................................................................................................................................................................................24110.091000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGCACCCACA--CACACAC............20160.061001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GTTATTGCTGCTGTTGTTGT.................................................................................................................................................................................................................................................20170.061000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCACCCACA--CACACACACAC........22190.051000000000000000000000000010000000000000000000000000000000000000
droGri2
CCCTCTC-TACCCCGCCGCACGCCCAAGTCCAGGAGATAACGCTTCGTGCAGTTGGAGAATGGTACTGATAAGCG-----------------------------------------------------------------------ATG-----TGAAG---TTCGCACGTGTTTGCAGTTGTTGCCAGT---GTCGATGTCTATTGCTGGCATTAGGGTTG------------------------------------------------------------TTCAA-----GCGATGTTATCAAC----------AC-ATAATAATAATCAAATCAGCGC--------------------------AACGACTCTCT-------------------------------------CTTTCTCTCACTCTACCTA--TCTATCTCTATCTAG---CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................GTTGTTGCCAGT---GTCGATGTC.............................................................................................................................................................................................................................................................2114.00413
..................................................................................................................................................................................GTTGTTGCCAGT---GTCGATGTCT............................................................................................................................................................................................................................................................2213.00312
........................................................................................................................................................................................................................GGGTTG------------------------------------------------------------TTCAA-----GCGATGTTATC........................................................................................................................................................2213.00330
............................................................................................................................................................................................................................................................................................................................................AATCAGCGC--------------------------AACGACTCTCT-------------------------------------........................................2013.00321
.....................................TAACGCTTCGTGCAGTTGGAGAATGGTA......................................................................................................................................................................................................................................................................................................................................................................................................2812.00202
..................................................................................................................................................ATG-----TGAAG---TTCGCACGTGTTTG.......................................................................................................................................................................................................................................................................................2212.00220
.............................................................................................................................................................................................................................................................................................AA-----GCGATGTTATCAAC----------AC-ATAATA..................................................................................................................................2412.00220
......................................AACGCTTCGTGCAGTTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................2012.00202
.................................................CAGTTGGAGAATGGTACTG...................................................................................................................................................................................................................................................................................................................................................................................................1912.00202
...................................................................GATAAGCG-----------------------------------------------------------------------ATG-----TGAAG---TTC..................................................................................................................................................................................................................................................................................................1912.00220
........................................................................................................................................................................................................................................................................................................................................ATCAAATCAGCGC--------------------------AACGACTC................................................................................2112.00211
...........................................................................................................................................................................................................ATTGCTGGCATTAGGGTTG------------------------------------------------------------T............................................................................................................................................................................2012.00220
..................................................................................................................................................................................................................GCATTAGGGTTG------------------------------------------------------------TTCAA-----GCG................................................................................................................................................................2012.00220
......................................AACGCTTCGTGCAGTTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................1912.00211
.....................................................................................................................................................................................GTTGCCAGT---GTCGATGTCT............................................................................................................................................................................................................................................................1912.00202
...............................................TGCAGTTGGAGAATGGTACT....................................................................................................................................................................................................................................................................................................................................................................................................2011.00101
...............................................TGCAGTTGGAGAATGGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
...........................................TTCGTGCAGTTGGAGAATG.........................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
..............GCCGCACGCCCAAGTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
..........................................................................................................................................................................................................TATTGCTGGCATTAGGGTTG------------------------------------------------------------TT...........................................................................................................................................................................2211.00101
..................CACGCCCAAGTCCAGGAGATAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
.....................................................................................................................................................................................................ATGTCTATTGCTGGCATTAGG.............................................................................................................................................................................................................................................2111.00110
.................GCACGCCCAAGTCCAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
............................................TCGTGCAGTTGGAGAATGGTA......................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
.......................................................GAGAATGGTACTGATAAGCG-----------------------------------------------------------------------ATG-----T............................................................................................................................................................................................................................................................................................................2411.00110
......C-TACCCCGCCGCACGCCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.CCTCTC-TACCCCGCCGCACGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
...................ACGCCCAAGTCCAGGAGATAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
........................CAAGTCCAGGAGATAACGCTTCGTG......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
......................................AACGCTTCGTGCAGTTGGAGAATG.........................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
........................................................................................................................................................................................GCCAGT---GTCGATGTCTATTGCTG.....................................................................................................................................................................................................................................................2311.00110
.......................................................GAGAATGGTACTGATAAGC.............................................................................................................................................................................................................................................................................................................................................................................................1911.00110
........................CAAGTCCAGGAGATAACGCTTCGTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCACTCTACCTA--TCTATCT............2311.00110
.......................................................................AGCG-----------------------------------------------------------------------ATG-----TGAAG---TTCGCACG.............................................................................................................................................................................................................................................................................................2011.00101
...................................................................................................................................................................................TTGTTGCCAGT---GTCGATGTCT............................................................................................................................................................................................................................................................2111.00110
.......................CCAAGTCCAGGAGATAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
.....................................................................................................................................................................................GTTGCCAGT---GTCGATGTC.............................................................................................................................................................................................................................................................1811.00110
..............................................................................................................................................................................TGCAGTTGTTGCCAGT---GTC...................................................................................................................................................................................................................................................................1911.00110
.............................CCAGGAGATAACGCTTCGTGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
...........................................................................................................................................................................................................................................................................................................................................AAATCAGCGC--------------------------AACGACTCTCT-------------------------------------C.......................................2211.00110
.....................................................TGGAGAATGGTACTGATA................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..................................................................................................................................................................................GTTGTTGCCAGT---GTCGATGTCTA...........................................................................................................................................................................................................................................................2311.00101
.............................................................................................................................................................................................................................G------------------------------------------------------------TTCAA-----GCGATGTTATCA.......................................................................................................................................................1811.00110
..........................................CTTCGTGCAGTTGGAGAATGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
.....................................................................................................................................................................................................................................................................................................................................ATAATCAAATCAGCGC--------------------------AACGAC..................................................................................2211.00101
...................................................GTTGGAGAATGGTACTGATAAGCG-----------------------------------------------------------------------AT...................................................................................................................................................................................................................................................................................................................2611.00101
.....................................................................................................................................................................................................................TTAGGGTTG------------------------------------------------------------TTCAA-----GCGATGTTATC........................................................................................................................................................2511.00101
...................................GATAACGCTTCGTGCAGTTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
.......................................ACGCTTCGTGCAGTTGGAGAATGGTACT....................................................................................................................................................................................................................................................................................................................................................................................................2811.00101
..................................................................................................................................................................................GTTGTTGCCAGT---GTCGATGTCTATT.........................................................................................................................................................................................................................................................2511.00101
.........ACCCCGCCGCACGCCCAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
..........................................................................................................................................................................................CAGT---GTCGATGTCTATTGCTG.....................................................................................................................................................................................................................................................2111.00110
.......................................................................AGCG-----------------------------------------------------------------------ATG-----TGAAG---TTCGCACGTGTTTG.......................................................................................................................................................................................................................................................................................2611.00110
.....................................................................................................................................................................................................................TTAGGGTTG------------------------------------------------------------TTCAA-----GCGATG.............................................................................................................................................................2011.00101
...............................................................................................................................................................................GCAGTTGTTGCCAGT---GTCGATGT..............................................................................................................................................................................................................................................................2311.00101
........................................................................................................................................................................................................................................................................................................................................ATCAAATCAGCGC--------------------------AACGACTCTC..............................................................................2311.00110
..........................................................................G-----------------------------------------------------------------------ATG-----TGAAG---TTCGCACGTGTTTGCAG....................................................................................................................................................................................................................................................................................2611.00101
.....................................................................................................................................................................................................................................................................................................................................ATAATCAAATCAGCGC--------------------------AACGACTCTCT-------------------------------------........................................2711.00110
.........................................GCTTCGTGCAGTTGGAGAATGGTACTG...................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
.................................................CAGTTGGAGAATGGTACT....................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.........................AAGTCCAGGAGATAACGCTTCGTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101
....................................................................ATAAGCG-----------------------------------------------------------------------ATG-----TGAAG---TTC..................................................................................................................................................................................................................................................................................................1811.00110
...............................................................................................................................................................................GCAGTTGTTGCCAGT---GTCGATGTCTATT.........................................................................................................................................................................................................................................................2811.00110
...................................................................GATAAGCG-----------------------------------------------------------------------ATG-----TGAAG---TTCGCACG.............................................................................................................................................................................................................................................................................................2411.00101
....................................................................................................................................................................CGCACGTGTTTGCAGTTGTT...............................................................................................................................................................................................................................................................................2011.00110
....................................................................................................................................................................................................................................................................................................................................................C--------------------------AACGACTCTCT-------------------------------------CTTTCTCT................................2011.00110
...................................................................................................................................................TG-----TGAAG---TTCGCACGTGTT.........................................................................................................................................................................................................................................................................................1911.00110
...........................................................................................................................................................................................................ATTGCTGGCATTAGGGTTG------------------------------------------------------------TTC..........................................................................................................................................................................2211.00101
........................................................................................................................................................................CGTGTTTGCAGTTGTTGCCAGT---GTC...................................................................................................................................................................................................................................................................2511.00110
..................................................................................................................................................................................GTTGTTGCCAGT---GTCGATG...............................................................................................................................................................................................................................................................1911.00101
..............................................................................................................................................................................................................GCTGGCATTAGGGTTG------------------------------------------------------------TTCA.........................................................................................................................................................................2011.00101
...................................................................................................................................................................................................................................................................................................................................................GC--------------------------AACGACTCTCT-------------------------------------CTTTCTC.................................2011.00110
.........................................................................................................................................................................................................................................................................................................................................TCAAATCAGCGC--------------------------AACGACTCT...............................................................................2111.00110
.............................................CGTGCAGTTGGAGAATGGTACT....................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
..........................................CTTCGTGCAGTTGGAGAATGGTA......................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
...........................................................................................................................................................................................................ATTGCTGGCATTAGGGTTG------------------------------------------------------------TTCA.........................................................................................................................................................................2311.00110
...........................GTCCAGGAGATAACGCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
..........................................................AATGGTACTGATAAGCG-----------------------------------------------------------------------ATG-----T............................................................................................................................................................................................................................................................................................................2111.00101
........TACCCCGCCGCACGCCCAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...............................................................................................................................................................................GCAGTTGTTGCCAGT---GTCGATGTC.............................................................................................................................................................................................................................................................2411.00101
..............................................................................................................................................................................................................GCTGGCATTAGGGTTG------------------------------------------------------------TTCAA-----GCGATG.............................................................................................................................................................2711.00110
............................................................................................................................................................................................................................................................................................................................................AATCAGCGC--------------------------AACGACTCTCT-------------------------------------CTTTCTCTC...............................2911.00110
........................................................................................................................................................................................................................................................................................................................................................................................CT-------------------------------------CTTTCTCTCACTCTACCTA--...................2111.00110
.................................................................................................................................................................................................................GGCATTAGGGTTG------------------------------------------------------------TTCAA-----GCGATGTTAT.........................................................................................................................................................2811.00110
............................................TCGTGCAGTTGGAGAATG.........................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
............................................................................................................................................................................................................................................................................................................................................AATCAGCGC--------------------------AACGACTCTCT-------------------------------------C.......................................2111.00101
..........................................CTTCGTGCAGTTGGAGAATGG........................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.....................................................................TAAGCG-----------------------------------------------------------------------ATG-----TGAAG---TTCGCACGTGTT.........................................................................................................................................................................................................................................................................................2611.00110
........................CAAGTCCAGGAGATAACGCTTCG........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
..............................................................................................................................................................................................................GCTGGCATTAGGGTTG------------------------------------------------------------TT...........................................................................................................................................................................1811.00110
..............................................GTGCAGTTGGAGAATGGTACT....................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.................GCACGCCCAAGTCCAGGAGATA................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
.....................................................................................................................................................................................................................................................................................................................................ATAATCAAATCAGCGC--------------------------AACGACTCTC..............................................................................2611.00110
........................................................................................................................................................................................GCCAGT---GTCGATGTCTATTG........................................................................................................................................................................................................................................................2011.00110
......................................AACGCTTCGTGCAGTTGGAGAATGGTA......................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
.............................CCAGGAGATAACGCTTCGTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
.....................................................................................................................................................................................................................................................................................................................................ATAATCAAATCAGCGC--------------------------AACGACT.................................................................................2311.00110
....CTC-TACCCCGCCGCACGCCCAAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
......................................................................................................................................................................CACGTGTTTGCAGTTGTTGCC............................................................................................................................................................................................................................................................................2111.00110
...........................................................................................................................................................................................................................................................................................................................................AAATCAGCGC--------------------------AACGACTCTCT-------------------------------------........................................2111.00110
...............................................................................................................................................................................GCAGTTGTTGCCAGT---GTCGATGTCT............................................................................................................................................................................................................................................................2511.00110
............................................................................................................................................................................................................................................................................................................................................AATCAGCGC--------------------------AACGACTCT...............................................................................1811.00110
........................................................................................................................................................................................................................................................................................................................................ATCAAATCAGCGC--------------------------AACGACTCTCT-------------------------------------CT......................................2611.00101
..............................................................................................................................................................................................................GCTGGCATTAGGGTTG------------------------------------------------------------TTCAA-----GCGAT..............................................................................................................................................................2611.00101
..................................................................................................................................................ATG-----TGAAG---TTCGCACGTGTTTGCA.....................................................................................................................................................................................................................................................................................2411.00110
......................................................................................................................................................................CACGTGTTTGCAGTTGTTG..............................................................................................................................................................................................................................................................................1911.00110
....................................................................................................................................................................................................................ATTAGGGTTG------------------------------------------------------------TTCAA-----GCGATGTT...........................................................................................................................................................2311.00110
....................................ATAACGCTTCGTGCAGTTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
..................................................................................................................................................ATG-----TGAAG---TTCGCACGTGTT.........................................................................................................................................................................................................................................................................................2011.00101
.............................................CGTGCAGTTGGAGAATGGTACTG...................................................................................................................................................................................................................................................................................................................................................................................................2311.00101
............................................................................................................................................................................................................TTGCTGGCATTAGGGTTG------------------------------------------------------------TTCAA-----G..................................................................................................................................................................2411.00110
....................CGCCCAAGTCCAGGAGATA................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...................................................GTTGGAGAATGGTACTGATAAGCG-----------------------------------------------------------------------ATG-----T............................................................................................................................................................................................................................................................................................................2811.00101
................................................................................................................................................................................CAGTTGTTGCCAGT---GTCGATGTCTA...........................................................................................................................................................................................................................................................2511.00101
................................................................................................................................................................................................................................................................................................................................TAATAATAATCAAATCAGCGC--------------------------AACGAC..................................................................................2711.00101
..............................................GTGCAGTTGGAGAATGGTACTG...................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
...................ACGCCCAAGTCCAGGAGATAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
............................................................................................................................................................................................................................................................................................................................................AATCAGCGC--------------------------AACGACTCTCT-------------------------------------CTTTCT..................................2611.00110
...................................................................GATAAGCG-----------------------------------------------------------------------ATG-----TGAAG---TTCG.................................................................................................................................................................................................................................................................................................2011.00101
............................................................................................................................................................................................GT---GTCGATGTCTATTGCT......................................................................................................................................................................................................................................................1811.00110
.........................................................................................................................................................................................................................................................................................................................................TCAAATCAGCGC--------------------------AACGACTCTCT-------------------------------------........................................2311.00110
....................................................................................................................................................................................................................................................................................................................................AATAATCAAATCAGCGC--------------------------AACGACTCTC..............................................................................2711.00101
................................................................................................................................................................................................................................................................................................................................................AGCGC--------------------------AACGACTCTCT-------------------------------------CTTTC...................................2111.00110
.......................................ACGCTTCGTGCAGTTGGAGAATGGTA......................................................................................................................................................................................................................................................................................................................................................................................................2611.00101
.................GCACGCCCAAGTCCAGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
..........................................CTTCGTGCAGTTGGAGAATGGTACT....................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
................................................................................................................................................................................................................TGGCATTAGGGTTG------------------------------------------------------------TTCAA-----GC.................................................................................................................................................................2111.00110
............................................................................................................................................................................................................................................................................................................................................AATCAGCGC--------------------------AACGACTCTCT-------------------------------------CT......................................2211.00101
......................................AACGCTTCGTGCAGTTGGAGAATGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2611.00101
..........................................CTTCGTGCAGTTGGAGAATGGTACTG...................................................................................................................................................................................................................................................................................................................................................................................................2611.00101
droWil2
CCCTGTC-GACTCCACCACATGCCCAGGTGGAACAGATAACATTACGGGCTGTGGGTGAATACTTTTAATAATGAA--------------------------CAG---A---------------------------CAGCAAAACATAA-----CAAGG---AACCAACCAATCAATGGCAAATAATAATAATACTAAAAATAATAATAACGAATAACAACA------------------------------------------------------------GTGAA-----GCCAAGTAATCAAC----------AC-TTAATAACAATCAAGTAAAAAC-------------------AC-------A----------------AACACAACCACACACACACA--------CACACACACACACACACACA--CACACACACACACAC---ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................ATTACGGGCTGTGGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................1812.00201010
...................................GATAACATTACGGGCTGTGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
.........................................................................GAA--------------------------CAG---A---------------------------CAGCAAAACATAA-----CAAG.........................................................................................................................................................................................................................................................................................................2411.00101000
.......................................................................................................................................................................................................................AACAACA------------------------------------------------------------GTGAA-----GCCAAGT............................................................................................................................................................1911.00100100
..................................................................................................................................................................................................................CGAATAACAACA------------------------------------------------------------GTGAA-----GCCAA..............................................................................................................................................................2211.00100010
..................................AGATAACATTACGGGCTGTGGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
................................ACAGATAACATTACGGGCTGT..................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...................................GATAACATTACGGGCTGTGG................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
......................................................................................................................................................................................................................TAACAACA------------------------------------------------------------GTGAA-----GCCAAG.............................................................................................................................................................1911.00100010
......................................................................AATGAA--------------------------CAG---A---------------------------CAGCAAAAC......................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................TTAATAATGAA--------------------------CAG---A---------------------------CAGCAAAACA.....................................................................................................................................................................................................................................................................................................................2511.00100010
.......................................................................................................................................................................................................AATAATAATAACGAATAACAACA------------------------------------------------------------GTGA.........................................................................................................................................................................2711.00100010
.........................................................................GAA--------------------------CAG---A---------------------------CAGCAAAACATA...................................................................................................................................................................................................................................................................................................................1911.00100010
...........................................................................................................................................................................................................................................................................................................AATCAAC----------AC-TTAATAACAATCAAGT........................................................................................................................2511.00100010
.................................CAGATAACATTACGGGCTGTGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.....................................................................................................................................................................................................................ATAACAACA------------------------------------------------------------GTGAA-----GCCAAGTAAT.........................................................................................................................................................2411.00100010
...............................AACAGATAACATTACGGGCTGT..................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.......................................................................................................................................................................................................................AACAACA------------------------------------------------------------GTGAA-----GCCAAGTA...........................................................................................................................................................2011.00100010
.....................................................................TAATGAA--------------------------CAG---A---------------------------CAGCAAAACATAA-----.............................................................................................................................................................................................................................................................................................................2411.00100001
........................................................................................................G---A---------------------------CAGCAAAACATAA-----CAAGG---A....................................................................................................................................................................................................................................................................................................2111.00100010
..CTGTC-GACTCCACCACATGCCCAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
................CACATGCCCAGGTGGAACAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.......................................................................................................................................................................................................................AACAACA------------------------------------------------------------GTGAA-----GCCAAGTAAT.........................................................................................................................................................2211.00100010
....................................................................ATAATGAA--------------------------CAG---A---------------------------CAGCAAA........................................................................................................................................................................................................................................................................................................................1911.00100001
...................................................................................................................................................................................................................GAATAACAACA------------------------------------------------------------GTGAA-----GCCAAGTAAT.........................................................................................................................................................2611.00101000
.....................................................................................................................................................................................................................ATAACAACA------------------------------------------------------------GTGAA-----GCCAA..............................................................................................................................................................1911.00100010
....................................................................ATAATGAA--------------------------CAG---A---------------------------CAGCAAAACAT....................................................................................................................................................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................................................................................................................................................................AATCAAGTAAAAAC-------------------AC-------A----------------AACACAACCAC..........................................................2811.00101000
......................................................................................................CAG---A---------------------------CAGCAAAACATAA-----CAAGG---AAC..................................................................................................................................................................................................................................................................................................2511.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................CAACCACACACACACA--------CACA.....................................20200.05100010
dp5
TGATGTC-GTTGTCGTTGTCGTTGTTTTTGCTGTTGTTGTTGTTGTTGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG-----TCATAAGTGCGTAGGCCAAAACGGACATGGCCTGT-------------------------------------------------------------------------T------------GA--------------C----------ATCTCC---ACA--CACAGGCACACACACACACACACAGGCACACAGATGGGTTCTTATATGAATAGGTAA---TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG-----TCATAAGTGCGTAGGC...............................................................................................................................................................................................................2111.0010100000000
droPer2
CCCTCTC-CACGCCGCCCCATGCCCAGGTGGAGCAGATAACGCTGCGAGCCGTTGGCGAATACTTTTGATAAGAGAGC--ACCCCACCGCCCCCCCCTCCAGAT--AACAGATTAAACAAA------------------------------------GC---CCCACACCACCCCGTAGTGGCTG---------------------------------------------------------------------------------------------------TAA-----GCACTGTAATCGAC----------AC-TCATTGGCAATCAAATGAGAGAGAGC-------AATGAGAGGG--GGAAACGACCT---------------------------CAGA--------TACAGATACAGATACAGATA--CAGACATTCAAGTGG---GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................G---------------------------------------------------------------------------------------------------TAA-----GCACTGTAATCGAC----------...........................................................................................................................................1815.005500000
.......................................................................................................................................................................................TG---------------------------------------------------------------------------------------------------TAA-----GCACTGTAATCGAC----------AC-T.......................................................................................................................................2212.002200000
.....................................................................................................................................................................................................................................................................................................CACTGTAATCGAC----------AC-TCATTGGC................................................................................................................................2312.002200000
.............................................................................................................................................................................................................................................................................................AA-----GCACTGTAATCGAC----------AC-TCATT...................................................................................................................................2312.002200000
............................................................................................................................................................................................................................................................................................TAA-----GCACTGTAATCGAC----------AC-TCATTGGC................................................................................................................................2711.001001000
..................................................................................................................................................................................................................................................................................................................................................................................GACCT---------------------------CAGA--------TACAGATACAG..............................2011.001001000
......................................................GGCGAATACTTTTGATAAGA.............................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..........................................................................................................................................................................ACCCCGTAGTGGCTG---------------------------------------------------------------------------------------------------TAA-----GCACTG.............................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................................AGC-------AATGAGAGGG--GGAAACGACCT---------------------------CA...................................................2611.001000001
........................................................................................................................................................................................G---------------------------------------------------------------------------------------------------TAA-----GCACTGTAATCGAC----------AC-TCATT...................................................................................................................................2511.001010000
..............................................................................................................................................................................................................................................................................................A-----GCACTGTAATCGAC----------AC-TCATTGGC................................................................................................................................2511.001100000
....................................ATAACGCTGCGAGCCGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.................................................................................................................................................................................................................................................................................................................................................................................CGACCT---------------------------CAGA--------TACAGATAC................................1911.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGATA--CAGACATTCA.........1911.001001000
.............................................................................................................................................................................................................................................................................................AA-----GCACTGTAATCGAC----------AC-TCAT....................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGATACAGATA--CAGAC..............20200.102200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATACAGATA--CAGAC..............18200.051100000
droAna3
CCCTTGC-CACGCCCCCGCACGCCCAGGTGGAGCAGATAACACTGCGGGCGGTGGGCGAGTACTTCTGATTCTGTTCTGA-----------------TTCTG--ATT-GC---------------GATTCGACTTTCGG----------CGATAAGAAGAGGCCCCGGAAGATTA--GGTGGCTG-----------------------------GAAGATAG--------------------------------------------------------------TAG-----GCCGAGCAATCGAC----------AC--GAATGCCAATCAATTGAAGGG-------------------------GAACGACCTGAGCA------AACACT--CCCACAACCACG--------CACACACACTACACCACACA-CTATACACACCAGCAC---ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................GATAACACTGCGGGCGGTGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
....................................................................ATTCTGTTCTGA-----------------TTCTG--ATT-GC---------------G.........................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................GACCTGAGCA------AACACT--CCCAC........................................................2111.001010000
..........................................................................................................................................................................GATTA--GGTGGCTG-----------------------------GAAGAT...........................................................................................................................................................................................................................................1911.001010000
.................................................................................................................................CGACTTTCGG----------CGATAAGAAGAGGC....................................................................................................................................................................................................................................................................................................2411.001001000
.............................................................................................................................................................AGAGGCCCCGGAAGATTA--GGTGGC................................................................................................................................................................................................................................................................................2411.001010000
........................................................................................................ATT-GC---------------GATTCGACTTTCGG----------CG................................................................................................................................................................................................................................................................................................................2111.001000010
................................................................................................................................................................................................................................................................................................................AC----------AC--GAATGCCAATCAATTGAAGGG-------------------------.........................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................A------AACACT--CCCACAACCACG--------CAC......................................2211.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACTACACCACACA-CT..................2011.001010000
....................................................................................................................................................................................................................................................................................................................................................G-------------------------GAACGACCTGAGCA------AACACT--CCC..........................................................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................A------AACACT--CCCACAACCACG--------CACA.....................................2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................ACT--CCCACAACCACG--------CACACACACTG..............................2611.001100000
........................................................................................................ATT-GC---------------GATTCGACTTTCGG----------C.................................................................................................................................................................................................................................................................................................................2011.001000010
...........................................................................................................................................................................ATTA--GGTGGCTG-----------------------------GAAGATAG--------------------------------------------------------------...........................................................................................................................................................................2011.001000010
........................................................................................................ATT-GC---------------GATTCGACTTTCGG----------CGAC..............................................................................................................................................................................................................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................AACGACCTGAGCA------AACACT--CCCAC........................................................2411.001100000
.................................................................................................................................................................................................................................................................................................................C----------AC--GAATGCCAATCAATTGAAGGG-------------------------GA.......................................................................................2611.001000010
................................................................................................................................................................................................................................................................................................................................................................................ACGACCTGAGCA------AACACT--CCCAC........................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................AGGG-------------------------GAACGACCTGAGCA------AAC..................................................................2111.001100000
.................................................................................................................................................................................GGTGGCTG-----------------------------GAAGATAG--------------------------------------------------------------TAG-----GCC................................................................................................................................................................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................CACG--------CACACACACTACACCACACA-CT..................2611.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCACG--------CACACACACTACACCACAC......................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGAGCA------AACACT--CCCACAACCACG--------C........................................2611.001000100
..............................................................................................................................................................................................................................................................................................................CGAC----------AC--GAATGCCAATCAATTGAAGGG-------------------------.........................................................................................2711.001000010
.......................................ACACTGCGGGCGGTGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.............................................................................................................................................................................................................................................................................................AG-----GCCGAGCAATCGAC----------AC--GAATG..................................................................................................................................2311.001100000
..........................................................................................................................................................................GATTA--GGTGGCTG-----------------------------GAAGATAG--------------------------------------------------------------TAG-----GC.................................................................................................................................................................2611.001010000
.............................................................................................................C---------------GATTCGACTTTCGG----------CGAT..............................................................................................................................................................................................................................................................................................................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................ACCTGAGCA------AACACT--CCCACAACC....................................................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................TTGAAGGG-------------------------GAACGACCTGAGCA------.....................................................................2211.001100000
.............................................................................................................................GATTCGACTTTCGG----------CGATAAGAAGA.......................................................................................................................................................................................................................................................................................................2511.001000010
...............................................................................................................................................................................................................................................................................................................................................................................AACGACCTGAGCA------AACACT--CCCACAACC....................................................2811.001100000
.............................................................................................................................................................................TA--GGTGGCTG-----------------------------GAAGATAG--------------------------------------------------------------TAG-----GCC................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................................................................AATCGAC----------AC--GAATGCCAATCAATTGAA.....................................................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................GAAGGG-------------------------GAACGACCTGAGC............................................................................1911.001010000
droBip1
ATGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------AT-AAAAAAAAAAAAAAAAAAAAAT------------AA------C------------------ACATAC---ACA--TACACATACACA--------TACACATACACATACACATA--CACATACACATACAC---ASizeHit CountTotal NormTotal
No Reads
droKik1
CCTTGGC-CACCCCACCGCATGCCCAGGTGGAGCAGATAACGCTGAGGGCGGTGGGCGAGTACTACTGATACCC-------------------------T--TAG---C---------------------------T---------------------------------------------------------------------------------------AGC--------------------------CAGATATCGCCTACTGATAAAGCCAGCTCCTCAGATT-----AGGCCATTGAC----------AC-ACAATAACAATCAAATGGAGGC-------------------------GAACGACCTACA----------------------A--------------------ACATACACACACA--CACACACAATCA-AA---ASizeHit CountTotal NormTotal
No Reads
droFic1
CCCTCTC-GACGCCGCCGCATACGCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGATAGCCG---------------------------AT--AACCGAT-AACCAATACCCGATAGCC------G----------------------------------------------------CTTGAT--------------------------------------------------------------------------AACG-CAGCCCCCGCGATT-----AGACCATCGACATTCACAATAAC-CAAATAACAATCAAATGAAAGG-------------------------AAACGACCTGTC--C--CAA---ACA--CC--CAAACACA--------TACTTACACTTTAACACACA--GATACATTCACACACAAGASizeHit CountTotal NormTotal
No Reads
droEle1
CCCTGTC-GACGCCACCACACACCCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGATAACG-------------------------A--CGG--AAC---------------GATGGC-----------------ACGAT----AA---TG-------------------------------------------------------------------------------------------------------------CG-CAGCCCCCGAGATTAGGCAATCGAATCGAC----------TC-ACAATAACAATCAAATGAAGGGAAACGAAACGAAATGAAACGAAACGAAACGACCT--------------------------------------------------------------------------GC---ASizeHit CountTotal NormTotal
No Reads
droRho1
CCCTATC-GACCCCGCCCCACGCCCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGATACT-------------------------TCTG--ATA-GC---------------GATGGCA------G----------CGAT----------------------------------------------------------------------------------------------------------------------AACG-CAGCCCCCGAGATT-----AGGCAATCGAC----------TC-GCCATGACAATCAAATGAAGGG-------------------------AAACGACCTGCA----------------------C--------------------ACACACACACAC----------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCCTGTC-GACGCCGCCGCACACGCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGACGCCC-------------------------CTG--ATA-CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGAT---ASizeHit CountTotal NormTotal
No Reads
droTak1
CCCTATC-GACGCCGCCGCACACCCAGGTGGAGCAGATAACGCTGCGGGCGGTGGGCGAGTACTTCTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAATAAAT-ATTGAAATAACATTTATTTGC-------------------------------------------------AACACA--CACACACACACA--------CACACACACACACACACACA--CACACACACACACAC---ASizeHit CountTotal NormTotal
No Reads
dm3
AAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-CAGATAAAAGTTGCTTGGATAT------------TG------C------------------AAACAA---ACA--CACACACACACA--------CACACACACACACACACACA--CACACACACACACAC---ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................TGCTTGGATAT------------TG------C------------------AAACA......................................................................1912.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGCTTGGATAT------------TG------C------------------AAAC.......................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGCTTGGATAT------------TG------C------------------AAACAA---..................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACACACA--CACACACAC..........21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CACACA--CACACACACACACAC---.21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CA--CACACACACACA--------CACACACACACA.............................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACACA--CACACACACAC........21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACAA---ACA--CACACACACACA--------CACA.....................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GATAT------------TG------C------------------AAACAA---ACT--T............................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACA--CACACACACACAC......21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................A---ACA--CACACACACACA--------CAC......................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CAA---ACA--CACACACACACA--------CA.......................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................A---ACA--CACACACACACA--------CACA.....................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACAA---ACA--CACACACACACA--------CACACACACACACAA..........................34200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACACACACA--CACACAC............21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCCTATC-CACGCCGCCGCACACACAGGTGGAGCAGATAACGCTGAGGGCGGTGGGCGAGTACTTCTGATAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................GTGGGCGAGTACTTCTGATA................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000000000
...................................................GTGGGCGAGTACTTCTGATAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2212.00201100000000000000
..........................GGTGGAGCAGATAACGCTGAGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.............................GGAGCAGATAACGCTGAGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
droSec2
CCCTATC-CACGCCGCCGCACACACAGGTGGAGCAGGTAACGCTGAGGGCGGTGGGCGAGTACTTCTGATAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTCTTGT-TGTTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCAGTGCTTATATTTTATTTC-----ATGCCAACAGCA-------CTGT-TTAATTACACACAAAAGA---C---------------------------------------------AACACA--CCCACACACACA--------CACACACACACACACACACA--CACAAACACACACAC---ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACACACACACACACACACA--CACAAAC............26200.05101000000000
droEre2
TTTTTGTTCAAGTTATTATT-----------------------------------------------GTTATT-------------------------------------------------------------------------------------------------------------------------------------------ATTTAATTACTTACAGCTATACA----------------------------------------------------------------------T----------AC-GTACATACGTACATACGGACAT------------AC-----AT------------------ACATAC---ATA--CATACATACATA--------CATACATACATACATACATA--CATACATACATACAT---ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................TACATACATA--------CATACATACATACATACA.......................28200.0511000000

Generated: 05/17/2015 at 10:49 PM