ID:

dmo_678

 Coordinate:

scaffold_6473:5258134-5258202 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.3 -21.1 -21.1

Flybase annnotation

CDS [Dmoj\GI15062-cds]; exon [dmoj_GLEANR_15831:4]; CDS [Dmoj\GI15062-cds]; exon [dmoj_GLEANR_15831:3]; intron [Dmoj\GI15062-in]

Repeatable elements

NameClassFamilyStrand
(TCG)nSimple_repeatSimple_repeat+
(CTG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_1756:5231-5248 -
  2. scaffold_6328:2722632-2722649 -
  3. scaffold_6359:1157503-1157520 -
  4. dmo_678  scaffold_6473:5258168-5258185 -
  5. scaffold_6473:5971947-5971964 -
  6. scaffold_6473:12229675-12229692 -
  7. scaffold_6473:13723596-13723613 -
  8. scaffold_6473:14472246-14472263 -
  9. scaffold_6473:15612621-15612638 -
  10. scaffold_6496:1729596-1729613 -
  11. scaffold_6496:21048372-21048389 -
  12. scaffold_6500:14387980-14387997 +
  13. scaffold_6540:2373190-2373207 -
  14. scaffold_6540:8084202-8084219 -
  15. scaffold_6540:17130819-17130836 +
  16. scaffold_6540:28061391-28061408 -
  17. scaffold_6680:7719967-7719984 -
  18. scaffold_6680:18193645-18193662 -
  19. scaffold_6680:18414177-18414194 -
  20. scaffold_6680:21427139-21427156 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------##################################################
GCTGCTCGACTCCGCCCCAGATGCCGGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACGTCGACGACGACGACGACGGCGGCAACGGCGATAACGACGAGCGCAGCCCCGCTGCAGGAGAAATCGAATGCCGATGGCAGCCAAAAGTCATTCCAGAGCCAAAGCGG
**************************************************...(((((..(((((....))))).....((.(((..((.((.......))..))..))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
...................................................................GACGACGACGACGGCGGC.................................................................................... 18 0 20 0.05 1 1

Anti-sense strand reads

CGACGAGCTGAGGCGGGGTCTACGGCCGTCGTCGTCGTCGTCGTTGTCGTCGTCGTCGTTGCAGCTGCTGCTGCTGCTGCCGCCGTTGCCGCTATTGCTGCTCGCGTCGGGGCGACGTCCTCTTTAGCTTACGGCTACCGTCGGTTTTCAGTAAGGTCTCGGTTTCGCC
**************************************************...(((((..(((((....))))).....((.(((..((.((.......))..))..))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
.............................................................................................................GGGCGGCGTCCTCTTTAGCTT....................................... 21 1 1 1.00 1 1
...............................................................................................................GCGCCGTCCCCCTTAGCTT....................................... 19 3 10 0.20 2 2

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:5258084-5258252 - dmo_678 GCTG-CTC---GACTCC--------------GCCCCAGA--------------------TGCCG---GCA------GCAGC-------AGCAGCAGCAACAGC---AGCAGCA---G--CAACGT---CGACGACGACGACGACGGCGGCAACGGCGATA---------ACGACGAGCGCAGCCCCG------------------------------------------------------------CT------------------------GCAGGAGAAA------------------------------------------------------------------------TCGAATGCCGATGGC--------------------AGCCAAAAGT------------------------------------------CATT----CCAGAGCCAAAGCGG
droVir3 scaffold_12928:4903867-4904004 + AGCC----G-------A--------------TGCGCATG-----------------------------CCGCA---GC-------AGCAGCAGCAGC---AACAGCAGC---AGCTG--CAG---------------------------------------CAGCAACA---------------GCAACAGTTGCAGCA----GCT----------------G---C------AGCTG---C---AG------AATGCG--------------GC---C---------------------------------------------------------------------------------GTTGCGA----------ATGCGAATGCGGCAACGGCA---G-------------------------------------------------CTGCCGCCGCAGCGG
droGri2 scaffold_15203:7309869-7309986 + GCTG-CTC---GACGCC--------------GCCTCAAA------------------------------------------------------TGGC---AATG---ACGACG---T-----------------------------------CGACGACG---------ACGACGACAACAGCTCCA---------CTGC----TG----------------G-------------------------------------------------------AGAAA------------------------------------------------------------------------ACCAATGCCGATGGC--------------------AGCCAAAAGT------------------------------------------CATT----CCAGAGCCAGAACGG
droWil2 scf2_1100000004902:2139279-2139416 + CAG-----------------------------------------------------------CA---GCAGCA---A---C----AACAACAGCAGC---AACA---ACAGCA---G--CAGCAA---CAACAACA------------------------------------------------ACAACAGCAGCAGCA----GCA----------------A---C------AACAA---C---AA------CAGACGCATCAGCACCAA--------------------------------G----GCAAC-----------------------------------------------------AT-----------------GC---AGCCACAAA------------------------------GCCAACA---------G----CCGCAGCCACAGCGG
dp5 XR_group5:526265-526415 - TCCA-C----------C--------------AC---CAA-----------TGATGGC----GCCGCAGCAGCA---G-------------CAGCAAC---AGCAGC------A---GCA------ACA--------------------------GCAG---CAGCAACA---------------GCAGCAGCA---GCA-----------------------G---C------AGATTCAACAGCAGCAGCAACA------------GCAGCAGC---A---------------------------------------------------------------------------------GATTCAA----------CAGCAACAGCAGCAGCCGAT---G-------------------------------------------------CTGCTGCCACAGCAG
droPer2 scaffold_5:1427463-1427618 + GACA-C----------C--------------C-CCCAA-----------------------------GCAGCA---G-------CAGCAGCAGCAGC---AGC---------G------------GCA--------------------------GCAGCGTCA---ACG------------------CCGACGCCAAAC----AA-CAGCAGCAAACGC-------------------TGAT---GA------CGG---------------AGACGACACCCA------CG-----------------GCTGCATGTATGACGGATGGAAAACAAATACTGGTATCGTGCAAAAACCT------------------------------------------------------------------------------------CATT------------------C
droAna3 scaffold_13335:501240-501387 - CTCC----A----------------------------------------------------------GCAGCA---G-------CAGCAGCAACAGC---AAC---------A------------GCA--------------------------GCAGCAACA---ACA---------------GCAGCAGCAGCAGCA----ACA----------------G---CAGCAGCAGC---AAC---AA------CAG---------------CAGCAGCAGCAA------CA-----------------GCAAC------------------------------------------------------------GCGA----------TGCAGCAAAAGA------------------------------ATTGGCGGAACTCCATG----CAAATGCTGTGGCAG
droBip1 scf7180000396413:1233708-1233863 - GCATGCCC---AGC-------------------------------------------------------AGCA---T-------CAGCAGCAG-----------------------------------GTGCGACAACAGCAGCCGACGCAGCAGCAGCA---------GCAACAGCAACAACCACA---------GCAG----CA----------------GCAGC------AGCAGCAACCACCACAACAACA------------GCAGCAGC---A---------------------------------------------------------------------------------GCAGCAG----------CAACAACAACAGCAACCTGTGGT-------------------------------------------TTT----CC---------AGAG
droKik1 scf7180000302385:76397-76552 - CAAT----------ACC--------------ATCCCCA-----------------------------GCAGCA---G-------CAG---CAGCAGC---AAC---------A---ACA------GCA--------------------------GCAGCAGCAACAGCAG---------------CAACTGCA---GCA-GCATCA----------------G---C------AGCTACAGCAGCAGCA------------ACAGCTGCAGCAGC---A---------------------------------------------------------------------------------ACTGCAA----------CAGCAGCAGCAGCAGCAGAT---G------------------------------CAACT---------G----CAGATGCACCAACGG
droFic1 scf7180000454050:1142871-1143047 - CAAC----TG-CGC----------------------CAG--------------CACC---AGCA---GCAACAGCAACAC----------CAGCAGC---AACA---------------------TCA--------------------------GCAGCAGCAGCAGCAC---------------CAACATCA---GCA-ACAGCA----------------G---C------AACATCAACAGCAACA------------------------ACAGCAACAA--------------------------CAAC------------------------------------------------------------GC------GGCAGAGACGGCA---------TGAAACCCAAGCAGATCTGCAGTGCAAATGC--------CAGT----CCCGAGGTCAAACAG
droEle1 scf7180000491338:910754-910910 - TCAG-CCC---TAC----------------------CAA--------------TACC---AACA---GCAGCA---G-------CAG---CAGCAGC---AGC---------A---TCA------TCA--------------------------GCAACAGCAACATCAG---------------CAACACCA---GCA-GCACCA----------------G---C------AACACCAGCGACAGCA------------------------GCAGCAGCAA------------------------------------------------------------------------CATCAGTCGCAC----------TACCCACAGCAACACCAGCA---A-------------------------------------------TT----C--CAGCCGACGCAG
droRho1 scf7180000778995:15163-15333 + GTTC----A---ACGCA--------------GCGTCAGGTGCAGCAGCAACAAGAGCAC---CA---GCAGCA---G-------CAG---CAACAGC---AGC---------A---GCA------GCA--------------------------ACAACAACAACAGCAG---------------GAACAGCA---GCA-GCAACA----------------A---C------AACAG---C---AG------CAGCAGCAACAACAGCAGCAGC---AGCAA---------------------------------------------------------------------------------CAA----------CAACAGC------AGCAGCA---ACT---------------------------------------A---------GTATCAGCGACAA
droBia1 scf7180000302126:1180516-1180682 - CTCC----TC-CGCTCCACCGTTACC-----AGTT--AA-------------------C---CA---GCAGCA---G-------C---AACAGCAGC---AACA------------GCA------GCA--------------------------GCAGCAGCAACAGCA---------------GCAACAGCAGCAGCA----GCT----------------C---C------AGCAG---C---AG------CAGCTCCAGCAGCTCCAGCAGC---A---------------------------------------------------------------------------------GCAGCAC----------CAGCAGCAGCAACAACCGACAGT-------------------------------------------ATT----GAAGCGCCA----AA
droTak1 scf7180000414393:206762-206907 - CTCC----TC-GAACAC--------------ATCCC------------------------TGCA---GCA------AC-------AGCAACAGCAGC---AACTGCAGC---AGCAG--CAG---------------------------------------CTGCAACA---------------GCAACAGCAGCTGCA----GCT----------------T---C------AGCAG---A---AG---------------------------CAGAAGCAA------------------------------------------------------------------------CAGCTGGCCAACAGCGGCGAGA----------AGCAGCAGAG------------------------------------------------------CATCTCGAAGGCGG
droEug1 scf7180000409110:974687-974833 - GCCC----ATCATTTGC--------------ATCCCAGT--------------------CATGG---GCA------TTCGC----CGTCGCAGCAGC---AACA---GCAGCA---G--CAGCAG---CAACAACA------------------------------------------------ACAGCAGCAGCAGCA----GCA----------------A---C------AACAA---C---AA------CAGGCG--------------GC---------------------------------------------------------------------------------------TGCACAACAGCAATT--------GCTG--GTGAAGAGT------------------------------------------GGCT----CCATAACC-------
dm3 chrX:10593668-10593834 + CCGA-C----------------------------CCAAA-----------------------------CAGCA---G-------CAACAGCAACAGC---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCAACA---GCA-ACAGCA----------------G---C------AACTTCAACCAGCACAACAGCA------------CCAG--------------------------------------CAACATGTCCAC---------------------------------------CCCACAG----------ACG-----------------------TGAATTCCAGCTGCAACAGCAACCGGAGTAGCA--------GCCCTACGACAGCGGGAGCGG
droSim2 2l:3024092-3024261 - GACT-----------CC--------------ACCCCAAA-------------------TCAACG---GCA------GCACTACC----AGCACCATC---AGC---AGCAGCG---G--CAGCAG---CAACAACAACAACATCCACCACATCAACAATA---------ACAATAACCACATCTGCA---------GCAG----TG----------------G------------------------CA------------------------GCAGCAACAA------------------------------------------------------------------------CCTCAGTTTGACGACAGCAATC--------------------AGC------------------------------------------GGCA----GCAGCAACAGAATGG
droSec2 scaffold_5:1301512-1301681 - GACT-----------CC--------------ACCCCAAA-------------------TCAACG---GCA------GCACCACC----AGCACCATC---AGC---AGCAGCG---G--CAGCAG---CAACAACAACAACATCCACCACATCAACAATA---------ACAATAACCACATCTGCA---------GCAG----TG----------------G------------------------CA------------------------GCAGCAACAA------------------------------------------------------------------------CCTCAGTTTGACGACAGCAATC--------------------AGC------------------------------------------GGCA----GCAGCAACAGAATGG
droYak3 2L:16539889-16540045 - GCTG-CCC---AGC--CATGATCTCC-----ACTCTGA------------------------GA---GCAGCA---G-----CC----AGCAACAGC---AGC---------A---GCA------GCA--------------------------GCAGCAGCAACAGCAG---------------CAACA------GCA-GCAACA----------------G---C---AACACC---AGC---AG------CAG---------------CATCAGCAGCAA------CAGCAACGGACGCAGACAA-CACC----------------------------------------------------------TCA-----------------------------------------------------------------------A----CCGGCGCAGCAGCAG
droEre2 scaffold_4770:14415166-14415346 - TGCT---C---GAAGGC-----TGCGAAGGCAACGCC-----------------------AGCA---GCAGCA---G-------CAG---CAGCAGC---AAC---------A------------GCA--------------------------GCAGCAACA---GCA---------------ACGCCAGCAGCAACA----AC-CAAAAGGCCGCGGCCA----------------CGACGACGACG------------------------ACGGCGACGACGGCGA--------------A----CCTTT-------------GTAAT------------------------CGCAGT-----------------GGCGGCAGCAGCAGTCGCA-GT------------------------------------------CATC----G--CAGCGCCCGCAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCTG-CTC---GACTCC--------------GCCCCAGA--------------------TGCCG---GCA------GCAGC-------AGCAGCAGCAACAGC---AGCAGCA---G--CAACGT---CGACGACGACGACGACGGCGGCAACGGCGATA---------ACGACGAGCGCAGCCCCG------------------------------------------------------------CT------------------------GCAGGAGAAA------------------------------------------------------------------------TCGAATGCCGATGGC--------------------AGCCAAAAGT------------------------------------------CATT----CCAGAGCCAAAGCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................GACGACGACGACGGCGGC...........................................................................................................................................................................................................................................................................................................................18200.051100000
droVir3
AGCC----G-------A--------------TGCGCATG-----------------------------CCGCA---GC-------AGCAGCAGCAGC---AACAGCAGC---AGCTG--CAG---------------------------------------CAGCAACA---------------GCAACAGTTGCAGCA----GCT----------------G---C------AGCTG---C---AG------AATGCG--------------GC---C---------------------------------------------------------------------------------GTTGCGA----------ATGCGAATGCGGCAACGGCA---G-------------------------------------------------CTGCCGCCGCAGCGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................TGCGA----------ATGCGAATGCGGCAAC........................................................................2112.002000000000000000000000000000000001000100000000000000000000000000
............................................................................................................................................................................................................CT----------------G---C------AGCTG---C---AG------AATGCG--------------GC---C---------------------------------------------------------------------------------GT.......................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................TGCAGCA----GCT----------------G---C------AGCTG---C---AG------AATGCG--------------GC---C---------------------------------------------------------------------------------.........................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GTTGCGA----------ATGCGAATGCGGC...........................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TGCGA----------ATGCGAATGCGGCAACGGCA---G-------------------------------------------------C..............2711.001000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GCAACGGCA---G-------------------------------------------------CTGCCGCCGCA....2111.001001000000000000000000000000000000000000000000000000000000000000
...C----G-------A--------------TGCGCATG-----------------------------CCGCA---GC-------AGCA........................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GTTGCGA----------ATGCGAATGCGG............................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................GCT----------------G---C------AGCTG---C---AG------AATGCG--------------GC---C---------------------------------------------------------------------------------GTTGC....................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
...............................TGCGCATG-----------------------------CCGCA---GC-------AGCAGC......................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CAGC---AGCTG--CAG---------------------------------------CAGCAACA---------------GCAACA...................................................................................................................................................................................................................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
..................................GCATG-----------------------------CCGCA---GC-------AGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
............................................................................................................C---AGCTG--CAG---------------------------------------CAGCAACA---------------GCAACA...................................................................................................................................................................................................................................................................................2330.331000000000000000000000000000000000001000000000000000000000000000
............................................................................................................C---AGCTG--CAG---------------------------------------CAGCAACA---------------GCAA.....................................................................................................................................................................................................................................................................................2140.251000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................CAACA---------------GCAACAGTTGCAGCA----G.....................................................................................................................................................................................................................................................................2160.171001000000000000000000000000000000000000000000000000000000000000
........................................................................................AGCAGCAGC---AACAGCAGC---A................................................................................................................................................................................................................................................................................................................................................................19200.153003000000000000000000000000000000000000000000000000000000000000
................................................................................................C---AACAGCAGC---AGCTG--CAG---------------------------------------CAGCA...........................................................................................................................................................................................................................................................................................................23120.081000000000000000000000000000001000000000000000000000000000000000
........................................................................................................GCAGC---AGCTG--CAG---------------------------------------CAGCAACA---------------.........................................................................................................................................................................................................................................................................................21130.081001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ACAGCAGC---AGCTG--CAG---------------------------------------CAGCA...........................................................................................................................................................................................................................................................................................................21150.071000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................G--CAG---------------------------------------CAGCAACA---------------GCAACAGT.................................................................................................................................................................................................................................................................................20160.061001000000000000000000000000000000000000000000000000000000000000
......................................................................GCA---GC-------AGCAGCAGCAGC---AACAGCA......................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
......................................G-----------------------------CCGCA---GC-------AGCAGCAGCAGC---AAC..........................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................C---AGCTG--CAG---------------------------------------CAGCAACA---------------GC.......................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
......................................G-----------------------------CCGCA---GC-------AGCAGCAGCAGC---.............................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................AGCAGCAGCAGC---AACAGCA......................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................GCAGCAGCAGC---AACAGCAGC---.................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................AGCAGC---AACAGCAGC---AGC..............................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AG---------------------------------------CAGCAACA---------------GCAACAGT.................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000001000000000000000000000000000000
......................................................................GCA---GC-------AGCAGCAGCAGC---AACAGC.......................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................CA---GC-------AGCAGCAGCAGC---AACAGCAGC---.................................................................................................................................................................................................................................................................................................................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
droGri2
GCTG-CTC---GACGCC--------------GCCTCAAA------------------------------------------------------TGGC---AATG---ACGACG---T-----------------------------------CGACGACG---------ACGACGACAACAGCTCCA---------CTGC----TG----------------G-------------------------------------------------------AGAAA------------------------------------------------------------------------ACCAATGCCGATGGC--------------------AGCCAAAAGT------------------------------------------CATT----CCAGAGCCAGAACGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CAG-----------------------------------------------------------CA---GCAGCA---A---C----AACAACAGCAGC---AACA---ACAGCA---G--CAGCAA---CAACAACA------------------------------------------------ACAACAGCAGCAGCA----GCA----------------A---C------AACAA---C---AA------CAGACGCATCAGCACCAA--------------------------------G----GCAAC-----------------------------------------------------AT-----------------GC---AGCCACAAA------------------------------GCCAACA---------G----CCGCAGCCACAGCGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................AA---C---AA------CAGACGCATCAGCACCAA--------------------------------G----G............................................................................................................................................................2511.00100010
.......................................................................................................................................................................................................................................................................................................................AC-----------------------------------------------------AT-----------------GC---AGCCACAAA------------------------------GCCAACA---------G----CC.............2511.00101000
............................................................................................................................................................................................................................................AA---C---AA------CAGACGCATCAGC.......................................................................................................................................................................................................1811.00100010
..............................................................................................................................................................................................................................................................AGACGCATCAGCACCAA--------------------------------G----GC...........................................................................................................................................................2011.00100010
...................................................................................................................................................................................................................................................................CATCAGCACCAA--------------------------------G----GCAAC-----------------------------------------------------AT-----------------GC---...........................................................................2211.00100010
..........................................................................................................................................................................................................................................ACAA---C---AA------CAGACGCATCAGC.......................................................................................................................................................................................................2011.00100001
.....................................................................................................................................................................................................................................................................................................................CAAC-----------------------------------------------------AT-----------------GC---AGCCACAAA------------------------------GC..................................1911.00100010
.................................................................................................................................................................................................................................................C---AA------CAGACGCATCAGCACC....................................................................................................................................................................................................1911.00100010
....................................................................................................................................................................................................................................................................ATCAGCACCAA--------------------------------G----GCAAC-----------------------------------------------------AT-----------------GC---...........................................................................2111.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................GCCACAAA------------------------------GCCAACA---------G----CCGCAGCC.......2411.00101000
.............................................................................................................................................................................................................................................A---C---AA------CAGACGCATCAGCACC....................................................................................................................................................................................................2011.00100010
......................................................................................................................................................................................................................................................A------CAGACGCATCAGCACCAA--------------------------------G----GCA..........................................................................................................................................................2311.00100001
......................................................................................ACAACAGCAGC---AACA---ACA...................................................................................................................................................................................................................................................................................................................................................................18200.15300030
............................................................................................................................A---CAACAACA------------------------------------------------ACAACAGCAGCAGCA----......................................................................................................................................................................................................................................................................24200.15300030
.....................................................................AGCA---A---C----AACAACAGCAGC---A............................................................................................................................................................................................................................................................................................................................................................................19200.15300030
.......................................................................CA---A---C----AACAACAGCAGC---AAC..........................................................................................................................................................................................................................................................................................................................................................................19200.15300030
.AG-----------------------------------------------------------CA---GCAGCA---A---C----AACAACAGCA..................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
.................................................................................................................................AACAACA------------------------------------------------ACAACAGCAGCAGCA----GCA----------------...................................................................................................................................................................................................................................................25200.10200020
............................................................................A---C----AACAACAGCAGC---AACA---ACA...................................................................................................................................................................................................................................................................................................................................................................21200.10200020
.........................................................................................................................................................................................CAACAGCAGCAGCA----GCA----------------A---C------........................................................................................................................................................................................................................................19200.10200020
.....................................................................AGCA---A---C----AACAACAGCAGC---AACA---A.....................................................................................................................................................................................................................................................................................................................................................................23200.05100010
.AG-----------------------------------------------------------CA---GCAGCA---A---C----AACAACAGCAGC---A............................................................................................................................................................................................................................................................................................................................................................................25200.05100010
................................................................................................................................CAACAACA------------------------------------------------ACAACAGCAG...............................................................................................................................................................................................................................................................................18200.05100010
...........................................................................................................................AA---CAACAACA------------------------------------------------ACAACAGCAGCAGC...........................................................................................................................................................................................................................................................................24200.05100010
.......................................................................................CAACAGCAGC---AACA---ACAGC.................................................................................................................................................................................................................................................................................................................................................................19200.05100001
.................................................................................................................................AACAACA------------------------------------------------ACAACAGCAGCAGCA----GCA----------------A---...............................................................................................................................................................................................................................................26200.05100010
................................................................................................................................................................................................AGCAGCA----GCA----------------A---C------AACAA---C---A...........................................................................................................................................................................................................................19200.05100001
................................................................................................................A---G--CAGCAA---CAACAACA------------------------------------------------ACAACAGC.................................................................................................................................................................................................................................................................................24200.05100010
...............................................................A---GCAGCA---A---C----AACAACAGCAGC---AA...........................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................................................................................GCAA---CAACAACA------------------------------------------------ACAACAGCAGC..............................................................................................................................................................................................................................................................................23200.05100010
.....................................................................................................................................ACA------------------------------------------------ACAACAGCAGCAGCA----GCA----------------A---...............................................................................................................................................................................................................................................22200.05100010
............................................................................................................................................................................................CAGCAGCAGCA----GCA----------------A---C------AACAA---C---AA------CAG.................................................................................................................................................................................................................27200.05101000
......................................................................................................CA---ACAGCA---G--CAGCAA---CAACAACA------------------------------------------------AC.......................................................................................................................................................................................................................................................................................25200.05100010
.......................................................................................................A---ACAGCA---G--CAGCAA---CAACAAC..........................................................................................................................................................................................................................................................................................................................................21200.05100001
..............................................................CA---GCAGCA---A---C----AACAACAGCAG.................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.........................................................................................ACAGCAGC---AACA---ACAGCA---G--CAGCA.....................................................................................................................................................................................................................................................................................................................................................24200.05100010
........................................................................................................................AGCAA---CAACAACA------------------------------------------------ACAACAGCAGCAGCA----......................................................................................................................................................................................................................................................................28200.05100010
....................................................................................................................................AACA------------------------------------------------ACAACAGCAGCAGCA----GCA----------------A---...............................................................................................................................................................................................................................................23200.05101000
................................................................................................................................................................................................AGCAGCA----GCA----------------A---C------AACAA---C---AA------CA..................................................................................................................................................................................................................22200.05100010
..........................................................................................................................................................................................AACAGCAGCAGCA----GCA----------------A---C------........................................................................................................................................................................................................................................18200.05100010
.........................................................................................ACAGCAGC---AACA---ACAGCA---.............................................................................................................................................................................................................................................................................................................................................................18200.05100001
.AG-----------------------------------------------------------CA---GCAGCA---A---C----AACAACAGCAGC---.............................................................................................................................................................................................................................................................................................................................................................................24200.05100010
......................................................................................ACAACAGCAGC---AACA---ACAGCA---G--C.........................................................................................................................................................................................................................................................................................................................................................23200.05100010
..........................................................................................................................................................................................AACAGCAGCAGCA----GCA----------------A---C------A.......................................................................................................................................................................................................................................19200.05101000
.......................................................................................................A---ACAGCA---G--CAGCAA---CAAC.............................................................................................................................................................................................................................................................................................................................................18200.05101000
....................................................................................................................................AACA------------------------------------------------ACAACAGCAGCAGCA----GCA----------------...................................................................................................................................................................................................................................................22200.05100100
........................................................................A---A---C----AACAACAGCAGC---AACA---A.....................................................................................................................................................................................................................................................................................................................................................................20200.05100010
dp5
TCCA-C----------C--------------AC---CAA-----------TGATGGC----GCCGCAGCAGCA---G-------------CAGCAAC---AGCAGC------A---GCA------ACA--------------------------GCAG---CAGCAACA---------------GCAGCAGCA---GCA-----------------------G---C------AGATTCAACAGCAGCAGCAACA------------GCAGCAGC---A---------------------------------------------------------------------------------GATTCAA----------CAGCAACAGCAGCAGCCGAT---G-------------------------------------------------CTGCTGCCACAGCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................GCAGC---A---------------------------------------------------------------------------------GATTCAA----------CAGCA...................................................................................1840.5020000200000
............................................................................................................................................................................................................................................................................CAGCAGC---A---------------------------------------------------------------------------------GATTCAA----------CAGCAACAG...............................................................................2420.5010100000000
....................................................................................................................................................................................................GCA-----------------------G---C------AGATTCAACAGCA...........................................................................................................................................................................................................................1840.5020000200000
..........................................................................................................................................................GCAG---CAGCAACA---------------GCAGCAGCA---GC...........................................................................................................................................................................................................................................................................23200.1020200000000
...................................................................GCAGCA---G-------------CAGCAAC---AGCAGC------.................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
....................................................................CAGCA---G-------------CAGCAAC---AGCAGC------A---G............................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
...............................................................................................................................................................................................................................................AACAGCAGCAGCAACA------------GCAGCA................................................................................................................................................................................................22200.0510000100000
................................................................................................................A---GCA------ACA--------------------------GCAG---CAGCAACA---------------GCA......................................................................................................................................................................................................................................................................................22200.0510000000001
........................................................................................................GC------A---GCA------ACA--------------------------GCAG---CAGCAACA---------------GCAGCA...................................................................................................................................................................................................................................................................................27200.0510100000000
.................................................................................................................................................................CAGCAACA---------------GCAGCAGCA---GCA-----------------------G---C------........................................................................................................................................................................................................................................22200.0510000000010
............................................................................G-------------CAGCAAC---AGCAGC------A---GCA------ACA--------------------------GCAG---CA..............................................................................................................................................................................................................................................................................................................27200.0510100000000
....................................................................................................................GCA------ACA--------------------------GCAG---CAGCAACA---------------GCA......................................................................................................................................................................................................................................................................................21200.0510100000000
............................................................................G-------------CAGCAAC---AGCAGC------A---GCA------ACA--------------------------GCA....................................................................................................................................................................................................................................................................................................................24200.0510000000001
......................................................................................................................A------ACA--------------------------GCAG---CAGCAACA---------------GCAGCA...................................................................................................................................................................................................................................................................................22200.0510000100000
..............................................................................................AAC---AGCAGC------A---GCA------ACA--------------------------GCAG---CA..............................................................................................................................................................................................................................................................................................................22200.0510000100000
droPer2
GACA-C----------C--------------C-CCCAA-----------------------------GCAGCA---G-------CAGCAGCAGCAGC---AGC---------G------------GCA--------------------------GCAGCGTCA---ACG------------------CCGACGCCAAAC----AA-CAGCAGCAAACGC-------------------TGAT---GA------CGG---------------AGACGACACCCA------CG-----------------GCTGCATGTATGACGGATGGAAAACAAATACTGGTATCGTGCAAAAACCT------------------------------------------------------------------------------------CATT------------------CSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................A---G-------CAGCAGCAGCAGC---AGC---------G------------GCA--------------------------.......................................................................................................................................................................................................................................................................................................................22200.051010000
droAna3
CTCC----A----------------------------------------------------------GCAGCA---G-------CAGCAGCAACAGC---AAC---------A------------GCA--------------------------GCAGCAACA---ACA---------------GCAGCAGCAGCAGCA----ACA----------------G---CAGCAGCAGC---AAC---AA------CAG---------------CAGCAGCAGCAA------CA-----------------GCAAC------------------------------------------------------------GCGA----------TGCAGCAAAAGA------------------------------ATTGGCGGAACTCCATG----CAAATGCTGTGGCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................CAA------CA-----------------GCAAC------------------------------------------------------------GCGA----------TGCAGC........................................................................2011.001010000
...............................................................................................................................................................................................................................................................G---------------CAGCAGCAGCAA------CA-----------------GCAAC------------------------------------------------------------G...........................................................................................2170.292000002
..................................................................................................................................................................................................CAGCA----ACA----------------G---CAGCAGCAGC---AAC---AA------CAG---------------C.................................................................................................................................................................................................28120.172110000
......................................................................................................................................................................................................A----ACA----------------G---CAGCAGCAGC---AAC---AA------C...................................................................................................................................................................................................................21200.153000003
.............................................................................................CAGC---AAC---------A------------GCA--------------------------GCAGCAACA---ACA---------------.........................................................................................................................................................................................................................................................................................23200.102000002
...................................................................................................................................................................................................AGCA----ACA----------------G---CAGCAGCAGC---AAC---AA------CAG---------------C.................................................................................................................................................................................................27120.081010000
........................................................................................AGCAACAGC---AAC---------A------------GCA--------------------------GCAG...................................................................................................................................................................................................................................................................................................................20200.051010000
.........................................................................................................................................................................................CAGCAGCAGCAGCA----ACA----------------G---CAGCA..........................................................................................................................................................................................................................................23200.051000001
.............................................................................................................................................................GCAACA---ACA---------------GCAGCAGCAGCA.............................................................................................................................................................................................................................................................................21200.051000001
.................................................................................................................................................................................................................................................C---AA------CAG---------------CAGCAGCAGCAA------CA-----------------GC...........................................................................................................................................................22200.051100000
..............................................................................................................................................................CAACA---ACA---------------GCAGCAGCAGC..............................................................................................................................................................................................................................................................................19200.051100000
................................................................................................C---AAC---------A------------GCA--------------------------GCAGCAACA---ACA---------------GCAGCA...................................................................................................................................................................................................................................................................................26200.051010000
.....................................................................................................................................................................................................CA----ACA----------------G---CAGCAGCAGC---AAC---............................................................................................................................................................................................................................19200.051001000
..................................................................................................................................................................................................................................CAGCAGCAGC---AAC---AA------CAG---------------C.................................................................................................................................................................................................19200.051001000
......................................................................................................................................................................................................................................AGCAGC---AAC---AA------CAG---------------CAGCAGCAGC........................................................................................................................................................................................24200.051100000
...............................................................................................................................................................AACA---ACA---------------GCAGCAGCAGCAGCA----AC....................................................................................................................................................................................................................................................................24200.051010000
................................................................................................................A------------GCA--------------------------GCAGCAACA---ACA---------------GCAGC....................................................................................................................................................................................................................................................................................21200.051001000
.........................................................................................................................................................................................................................................AGC---AAC---AA------CAG---------------CAGCAGCAG.........................................................................................................................................................................................20200.051010000
............................................................................G-------CAGCAGCAACAGC---AAC---------A------------GC..................................................................................................................................................................................................................................................................................................................................................20200.051010000
........................................................................................AGCAACAGC---AAC---------A------------GCA--------------------------GCAGC..................................................................................................................................................................................................................................................................................................................21200.051100000
....................................................................................................................................................................................................GCA----ACA----------------G---CAGCAGCAGC---AAC---AA------C...................................................................................................................................................................................................................23200.051100000
...........................................................................................................................................................CAGCAACA---ACA---------------GCAGCAGC.................................................................................................................................................................................................................................................................................19200.051100000
...................................................................................................................................................................................................................................AGCAGCAGC---AAC---AA------CAG---------------CAGC..............................................................................................................................................................................................21200.051001000
.....................................................................................AGCAGCAACAGC---AAC---------A------------GCA--------------------------GCAGC..................................................................................................................................................................................................................................................................................................................24200.051010000
droBip1
GCATGCCC---AGC-------------------------------------------------------AGCA---T-------CAGCAGCAG-----------------------------------GTGCGACAACAGCAGCCGACGCAGCAGCAGCA---------GCAACAGCAACAACCACA---------GCAG----CA----------------GCAGC------AGCAGCAACCACCACAACAACA------------GCAGCAGC---A---------------------------------------------------------------------------------GCAGCAG----------CAACAACAACAGCAACCTGTGGT-------------------------------------------TTT----CC---------AGAGSizeHit CountTotal NormTotal
No Reads
droKik1
CAAT----------ACC--------------ATCCCCA-----------------------------GCAGCA---G-------CAG---CAGCAGC---AAC---------A---ACA------GCA--------------------------GCAGCAGCAACAGCAG---------------CAACTGCA---GCA-GCATCA----------------G---C------AGCTACAGCAGCAGCA------------ACAGCTGCAGCAGC---A---------------------------------------------------------------------------------ACTGCAA----------CAGCAGCAGCAGCAGCAGAT---G------------------------------CAACT---------G----CAGATGCACCAACGGSizeHit CountTotal NormTotal
No Reads
droFic1
CAAC----TG-CGC----------------------CAG--------------CACC---AGCA---GCAACAGCAACAC----------CAGCAGC---AACA---------------------TCA--------------------------GCAGCAGCAGCAGCAC---------------CAACATCA---GCA-ACAGCA----------------G---C------AACATCAACAGCAACA------------------------ACAGCAACAA--------------------------CAAC------------------------------------------------------------GC------GGCAGAGACGGCA---------TGAAACCCAAGCAGATCTGCAGTGCAAATGC--------CAGT----CCCGAGGTCAAACAGSizeHit CountTotal NormTotal
No Reads
droEle1
TCAG-CCC---TAC----------------------CAA--------------TACC---AACA---GCAGCA---G-------CAG---CAGCAGC---AGC---------A---TCA------TCA--------------------------GCAACAGCAACATCAG---------------CAACACCA---GCA-GCACCA----------------G---C------AACACCAGCGACAGCA------------------------GCAGCAGCAA------------------------------------------------------------------------CATCAGTCGCAC----------TACCCACAGCAACACCAGCA---A-------------------------------------------TT----C--CAGCCGACGCAGSizeHit CountTotal NormTotal
No Reads
droRho1
GTTC----A---ACGCA--------------GCGTCAGGTGCAGCAGCAACAAGAGCAC---CA---GCAGCA---G-------CAG---CAACAGC---AGC---------A---GCA------GCA--------------------------ACAACAACAACAGCAG---------------GAACAGCA---GCA-GCAACA----------------A---C------AACAG---C---AG------CAGCAGCAACAACAGCAGCAGC---AGCAA---------------------------------------------------------------------------------CAA----------CAACAGC------AGCAGCA---ACT---------------------------------------A---------GTATCAGCGACAASizeHit CountTotal NormTotal
No Reads
droBia1
CTCC----TC-CGCTCCACCGTTACC-----AGTT--AA-------------------C---CA---GCAGCA---G-------C---AACAGCAGC---AACA------------GCA------GCA--------------------------GCAGCAGCAACAGCA---------------GCAACAGCAGCAGCA----GCT----------------C---C------AGCAG---C---AG------CAGCTCCAGCAGCTCCAGCAGC---A---------------------------------------------------------------------------------GCAGCAC----------CAGCAGCAGCAACAACCGACAGT-------------------------------------------ATT----GAAGCGCCA----AASizeHit CountTotal NormTotal
No Reads
droTak1
CTCC----TC-GAACAC--------------ATCCC------------------------TGCA---GCA------AC-------AGCAACAGCAGC---AACTGCAGC---AGCAG--CAG---------------------------------------CTGCAACA---------------GCAACAGCAGCTGCA----GCT----------------T---C------AGCAG---A---AG---------------------------CAGAAGCAA------------------------------------------------------------------------CAGCTGGCCAACAGCGGCGAGA----------AGCAGCAGAG------------------------------------------------------CATCTCGAAGGCGGSizeHit CountTotal NormTotal
No Reads
droEug1
GCCC----ATCATTTGC--------------ATCCCAGT--------------------CATGG---GCA------TTCGC----CGTCGCAGCAGC---AACA---GCAGCA---G--CAGCAG---CAACAACA------------------------------------------------ACAGCAGCAGCAGCA----GCA----------------A---C------AACAA---C---AA------CAGGCG--------------GC---------------------------------------------------------------------------------------TGCACAACAGCAATT--------GCTG--GTGAAGAGT------------------------------------------GGCT----CCATAACC-------SizeHit CountTotal NormTotal
No Reads
dm3
CCGA-C----------------------------CCAAA-----------------------------CAGCA---G-------CAACAGCAACAGC---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCAACA---GCA-ACAGCA----------------G---C------AACTTCAACCAGCACAACAGCA------------CCAG--------------------------------------CAACATGTCCAC---------------------------------------CCCACAG----------ACG-----------------------TGAATTCCAGCTGCAACAGCAACCGGAGTAGCA--------GCCCTACGACAGCGGGAGCGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................AACAGCA------------CCAG--------------------------------------CAACATGTCC..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGTCCAC---------------------------------------CCCACAG----------ACG-----------------------TGAATTCCAGC...................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCA...................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................ACAG------CAGCAACA---GCA-ACA......................................................................................................................................................................................................................................................................18200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000200000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ACAGCAACAGC---AGC---------A--------------------------------------------ACAGCA------G---....................................................................................................................................................................................................................................................................................................22120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AA-----------------------------CAGCA---G-------CAACAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CAACAG------CAGCAACA---GCA-A........................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCA...................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
....................................................................................CAACAGCAACAGC---AGC---------A--------------------------------------------AC..................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000
......................................A-----------------------------CAGCA---G-------CAACAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AACAG------CAGCAACA---GCA-ACA......................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AGCAACAGC---AGC---------A--------------------------------------------ACAGCA------G---CA..................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................CAACA---GCA-ACAGCA----------------G---C------AAC.....................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................A--------------------------------------------ACAGCA------G---CAACAG------CAGCAAC.................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AACAGC---AGC---------A--------------------------------------------ACAGCA------G---CAAC................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................ACAG------CAGCAACA---GCA-ACAGCA----------------G---C------A.......................................................................................................................................................................................................................................24160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................A-----------------------------CAGCA---G-------CAACAGCAACAGC---AGC---------A--------------------------------------------....................................................................................................................................................................................................................................................................................................................24160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGCA---G-------CAACAGCAACAGC---AGC---------A--------------------------------------------ACA.................................................................................................................................................................................................................................................................................................................25180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................AACAGCAACAGC---AGC---------A--------------------------------------------ACAGC...............................................................................................................................................................................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................A------G---CAACAG------CAGCAACA---GCA-AC.......................................................................................................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................GC---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCAAC.................................................................................................................................................................................................................................................................................26190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................C---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CA......................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................A--------------------------------------------ACAGCA------G---CAACAG------CAGCAA..................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................C---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGC....................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GCA------G---CAACAG------CAGCAACA---GC...........................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................ACAGC---AGC---------A--------------------------------------------ACAGCA------G---CA..................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CA---G-------CAACAGCAACAGC---AGC---------A--------------------------------------------....................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AACAGC---AGC---------A--------------------------------------------ACAGCA------G---CAA.................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GC---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------C.......................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AG------CAGCAACA---GCA-ACAGCA----------------...................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CA------G---CAACAG------CAGCAACA---GCA-.........................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................C---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCA...................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAGCA---G-------CAACAGCAACAGC---A............................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................................................................AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCAA..................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CAGCAACAGC---AGC---------A--------------------------------------------ACAGC...............................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................CAGCA---G-------CAACAGCAACAGC---AG...........................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................A---G-------CAACAGCAACAGC---AGC---------A--------------------------------------------....................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................CAGCAACAGC---AGC---------A--------------------------------------------ACAGCA------G---CAA.................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAG------CAGCAACA---GCA-ACAGCA----------------G---C------A.......................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGCA------G---CAACAG------CAGCAACA---GCA-.........................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................C---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCAA..................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AGCAACA---GCA-ACAGCA----------------G---C------A.......................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................ACAGCA------G---CAACAG------CAGCAACA---.............................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAGCA---G-------CAACAGCAACAGC---AGC---------A--------------------------------------------....................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AGC---AGC---------A--------------------------------------------ACAGCA------G---CAACAG------CAGCA...................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................AACAGCAACAGC---AGC---------A--------------------------------------------ACAG................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ACAGCA------G---CAACAG------CAGCA...................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAG------CAGCAACA---GCA-ACAGCA----------------G---...............................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................AGCAACAGC---AGC---------A--------------------------------------------ACAGCA------G---CAA.................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................ACAGC---AGC---------A--------------------------------------------ACAGCA------G---CAACA...............................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................A------G---CAACAG------CAGCAACA---GCA-.........................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CAGCAACA---GCA-ACAGCA----------------G---C------A.......................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CAGCAACAGC---AGC---------A--------------------------------------------ACAGCA------........................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CAGCAACAGC---AGC---------A--------------------------------------------ACAGCA------G---CA..................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAG------CAGCAACA---GCA-ACAGCA----------------...................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
droSim2
GACT-----------CC--------------ACCCCAAA-------------------TCAACG---GCA------GCACTACC----AGCACCATC---AGC---AGCAGCG---G--CAGCAG---CAACAACAACAACATCCACCACATCAACAATA---------ACAATAACCACATCTGCA---------GCAG----TG----------------G------------------------CA------------------------GCAGCAACAA------------------------------------------------------------------------CCTCAGTTTGACGACAGCAATC--------------------AGC------------------------------------------GGCA----GCAGCAACAGAATGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................CAGCAACAA------------------------------------------------------------------------CCTCAGTTTGACGACA..............................................................................................2511.00100000100000000000
.............................................................ACG---GCA------GCACTACC----AGCAC....................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----GCAGCAACAGAAT..15170.06100000000010000000
...........................................................................................................GCAGCG---G--CAGCAG---CA...............................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
GACT-----------CC--------------ACCCCAAA-------------------TCAACG---GCA------GCACCACC----AGCACCATC---AGC---AGCAGCG---G--CAGCAG---CAACAACAACAACATCCACCACATCAACAATA---------ACAATAACCACATCTGCA---------GCAG----TG----------------G------------------------CA------------------------GCAGCAACAA------------------------------------------------------------------------CCTCAGTTTGACGACAGCAATC--------------------AGC------------------------------------------GGCA----GCAGCAACAGAATGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................GTTTGACGACAGCAATC--------------------AGC------------------------------------------GGC....................2311.0010100
GACT-----------CC--------------ACCCCAAA-------------------TCAACG---GC............................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.................................................................................................................................................................................................................................................................................................................................................................................CAGCAATC--------------------AGC------------------------------------------GGCA----GCAGCAACAGA....2611.0010100
......................................................................................................................................CAACAACATCCACCACATCAAC.....................................................................................................................................................................................................................................................................................................................2211.0011000
....................................................................................................AGC---AGCAGCG---G--CAGCAG---CAAC.............................................................................................................................................................................................................................................................................................................................................21150.0710010
droYak3
GCTG-CCC---AGC--CATGATCTCC-----ACTCTGA------------------------GA---GCAGCA---G-----CC----AGCAACAGC---AGC---------A---GCA------GCA--------------------------GCAGCAGCAACAGCAG---------------CAACA------GCA-GCAACA----------------G---C---AACACC---AGC---AG------CAG---------------CATCAGCAGCAA------CAGCAACGGACGCAGACAA-CACC----------------------------------------------------------TCA-----------------------------------------------------------------------A----CCGGCGCAGCAGCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................CAACA----------------G---C---AACACC---AGC---AG------....................................................................................................................................................................................................................1880.13101000000000
...................................................................................C----AGCAACAGC---AGC---------A---GCA------GCA--------------------------G......................................................................................................................................................................................................................................................................................................................21200.05101000000000
................................................................................................................A---GCA------GCA--------------------------GCAGCAGCAACAGCAG---------------CA......................................................................................................................................................................................................................................................................................25200.05101000000000
...............................................................................................GC---AGC---------A---GCA------GCA--------------------------GCAGCAGCAACAGC.........................................................................................................................................................................................................................................................................................................26200.05101000000000
droEre2
TGCT---C---GAAGGC-----TGCGAAGGCAACGCC-----------------------AGCA---GCAGCA---G-------CAG---CAGCAGC---AAC---------A------------GCA--------------------------GCAGCAACA---GCA---------------ACGCCAGCAGCAACA----AC-CAAAAGGCCGCGGCCA----------------CGACGACGACG------------------------ACGGCGACGACGGCGA--------------A----CCTTT-------------GTAAT------------------------CGCAGT-----------------GGCGGCAGCAGCAGTCGCA-GT------------------------------------------CATC----G--CAGCGCCCGCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................CGCC-----------------------AGCA---GCAGCA---G-------CAG---CAGCA..................................................................................................................................................................................................................................................................................................................................................................................2390.1110100000
....................................................................................CAG---CAGCAGC---AAC---------A------------GCA--------------------------GC.....................................................................................................................................................................................................................................................................................................................19200.0510100000

Generated: 05/17/2015 at 10:51 PM