ID:

dmo_670

 Coordinate:

scaffold_6473:4163327-4163477 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dmoj\GI15487-cds]; exon [dmoj_GLEANR_16221:1]; intron [Dmoj\GI15487-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AACAACAACAACAACAACAACAGCAACAGCAACAACAGCAACGTCGCCTGGTTACTCCGTTGTCCGTTGTCCGTAATATGACAGGTGGCGGTGCTCTGCCCGTTCCCATTGCAGCCATCTCTGCCTGACCATGCCAAGAGTTATCCATGCCGAACACACACACACACAAGCACACACACGCACACACACAGACACGCCCACACCACTCAGCTGCAGTCGGGGCCCGCGCTTTGTCACAGGAACTGTTAATA
**************************************************.......(((.(((.(((((.(((.......(((((((.((((..((((...........)))).)))).)))))))..((((....((....))))))............................))).)))...)).)))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
................................................................................................................................................CCATGCCGAACACAGAAAT........................................................................................ 19 3 20 0.05 1 1
......AACAACAACAACAACAGCAAC................................................................................................................................................................................................................................ 21 0 20 0.05 1 1
AACAACAACAACAACAACAACAGCAA................................................................................................................................................................................................................................. 26 0 20 0.05 1 1
...................ACAGCAACAGCAACAACAGCA................................................................................................................................................................................................................... 21 0 20 0.05 1 1
................ACAACAGCAACAGCAACAACAG..................................................................................................................................................................................................................... 22 0 20 0.05 1 1
............AACAACAACAGCAACAGCAACAACAG..................................................................................................................................................................................................................... 26 0 20 0.05 1 1

Anti-sense strand reads

TTGTTGTTGTTGTTGTTGTTGTCGTTGTCGTTGTTGTCGTTGCAGCGGACCAATGAGGCAACAGGCAACAGGCATTATACTGTCCACCGCCACGAGACGGGCAAGGGTAACGTCGGTAGAGACGGACTGGTACGGTTCTCAATAGGTACGGCTTGTGTGTGTGTGTGTTCGTGTGTGTGCGTGTGTGTGTCTGTGCGGGTGTGGTGAGTCGACGTCAGCCCCGGGCGCGAAACAGTGTCCTTGACAATTAT
**************************************************.......(((.(((.(((((.(((.......(((((((.((((..((((...........)))).)))).)))))))..((((....((....))))))............................))).)))...)).)))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V110
male body
....................................................................................................GCAAGGGCAACGTTGGTA..................................................................................................................................... 18 2 3 0.33 1 1
..................................................................................................GGGCAAGGGCAACGTTGG....................................................................................................................................... 18 2 4 0.25 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:4163277-4163527 + dmo_670 AACAAC-------------AACAACAACAACAACAGCAACAGCAACAACAGCAAC-GTC------------------------G------------------CCTGGTTACT-CCGTTGTCCGTTG--------------------------------------TC-----------------------------------------------------------------------------------CGTAATATGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGTGGC------------------------------------GGTGCTCTGCCCGTTCCC---ATTGCAGCCATCTCTGCC-----------------------------------------------------------------------------------------------------------------------------------------------------TG-ACCATGCCAAGAGTTATCCATGCCGAACACACACACACAC-------------------------------------------------------AAGCA--------CACACACGCACACACACAGACACGCCCAC------------------------------------------------A--------------------CCA------------------------------------------------------------------------------CTCAGCTGC----------AGTCGGGGCCCGCGCT---TTGTC--AC-----AG---GAACTGTTAATA
droVir3 scaffold_13049:6087802-6088049 + TGCAAC-------------AACAACAACAACAACAACATCAGCAAGCAACGCCCC-AT---------------CAAC---------G------G------------------------------------------TCGCTGCCATAATTTGT-----------------------------------------------------------------------------GGTC---------------TTTTACTGTG--AACTGCTGCTGC--------------------------------TGC---------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTTGTTGTTGGCCCATTGT----------------------------------------------------------------------------------------------------------TGCCG---------------------------------------------------------------CAACCTCAGTGCTGGGCATTATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACGGCTATTAA-------------------------------------------------------------------------------------------------TACATACAC-------------------------------------------------------ATGCA--------CACACACACACAC----------------ACACACATACACATAC--------------------------------------ACACTCAGCCATCTAGTGGGGGCA------------------------------------------------------------------------------------------------------------------GGGTTGGATTC------TCTGTAACGA
droGri2 scaffold_15081:586523-586767 - AACAAC-------------ATCAACAACAACAACAACAGCAACAGTAACAACGAC-GACA------------AC------------G------ACAACGTCGCCCGGGTACC-CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCTTTGCCCATAATATGACAGGTGGCCACCGACCCAAACCCACTTTCCTGGGCTACCCAGGCGGAGCTGCG--------AGGAGGAATGGCCA---------GA------AAAGCCAGCG------------------CC-----------------------------------------------------CAGTTCCCAGTGCCGGTTGTAGCTGTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCTAGC-----------------AGTCCGTAGCGGCGCT---TTGTC--AC-----AG---GAACTGTTAATA
droWil2 scf2_1100000004909:8938016-8938239 + AACAAC-------------AACAACAACATCAAGAGGAGCAGCAGCGGCAACAAC-ATCAGCAGA----TG---------------------------------------CA-C--------------------------TTTAATCATACATAAAGTTGTCT----TC----------------------------------------TTTTTGGTTCGTCTCTCTCATTTGTTAGATCAGTGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG----------------------ACACACACA-----CAC--------------------ACA----------------CACA-CAGACACACACACAACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------CAAACATACGCACACAC------ACAT--ACA------------------------------------CAC----T-----GACAGA-----------------------------------------------------------------------------------------------------CATCCACATC---AAGAC--AC-----AT---GCATAAATGGCA
dp5 XR_group3a:1367090-1367318 - AACAAC-------------AGCAACAGCAGCCACAGCAACAGCAACAGCGGCCGC-GCA------------------------G-CC-----------------TCCACAATACAGCTGCAAATTGTTCAAGCTAGCC----------------------------------------AGAG------------------------------------AGCCAGTGCC---------------------ATGTACCAAAGGAACAGC--------------------------------ATTTACAACACCAGTAACAGTGCCACAGCCACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCA------------------------CAGCCAGTGGCAGCAGCAAGAGCAAGACCACC--------------TCTCCAGCAGCAGCAGGAGC----------------------------------------------------------------------------------------------------------AGGA--GC-----AG---GAGCAGTGGCTG
droPer2 scaffold_77:231227-231501 - TGCAGC-------------AGCAGCAACAACAGCAACAACAGCAACAGCAGCAGA-ACG------------------------A-CATCGATCA------------------------GCAATTCGCGCAGGTGAACCAACAGTTC------C----------GGGAGCTTAATATGCAATATGATGG----------------------------------------------------------------------------------------------------------------------------------------TGGCAACTTAGAGGATACC------------------------------------------------------------C---------------------------------------------------------TACATCTGCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA---GGAGCAGCCACCTTTGCCTGATGTGCACCAGCAACAGCTGCCAGAGCAGCAGATGCACCAGCAGCAGCAATACTACGAGCC-----------------------------------AACGCCGCAGACGCAGCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCT------------------------------------------------------------------------------------------------------------------------------------------------------------CACGTA---CAGCC--GC-----AG---GAGGAGCTACCA
droAna3 scaffold_12916:15006411-15006641 + AGCAAC-------------AGCAACAGCAGCAACAGCAACAGCAGCAGCAGCAAC-ATCA------------AC------------A------A------------------------------------------CGATTACACTACTATAT----------GCC-----------------------------------------------------------------------------------ACTGACAGAA--CGTTGCACCTCACCCCCTGATGTGGTGCCTCGAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAATTTCC---ATAATAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAATAA---TAG------------------------CAACAA--------------------------------------------------------------------AATAGGCAACA------------------------------ACAGCAACAGCAACACCAGCAATCTGCAACAGTTGCCGCT----GGCTACG-------CTG--AC-----AG---AAGCTATGGTAG
droBip1 scf7180000396427:438614-438824 - AATAGC-------------AACAGCAACATCAACAGCAACGGCAACAACCACGTC-AA---------------TTGCAG-------A-----------------------TA-C------------TTCACATAAACA----------------------------------------AAAGCAA----------------------------------------------------------------------------GGCAGC-----------------------------------------------------------------------------------------------------------------------------------AGGCAC---------------------------------------------------------TACAACTGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGTCCAACAGTCCAAGCTGTCTAACTGTCAGATACAGATACACACA--------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------TCACACAAGAGTCACACTCTGGCACATA--------------------------------------------------------------------------------------CGCACA--------------------CACCAAGTCATT------------------CA-----------------------ATCAAC--------------------------------------------------------------------------------------------------------------TTCAGAGGCCG
droKik1 scf7180000302395:362875-363077 + AACAAC-------------AACACCAGCAACAGCAGCAGCAGCAACACCAGCAAC-ATG----------GCAGC------------A------ACGCCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATCCA--CTGCTTCCGCCTCCGCCGCCGCCAATTGCTCTGCATC---------------------AG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-----------------------------------GAC---------------------------------------------------------------------------------------------------------------------------------------------CACCAGTGCTT--CCATTGAGCACAGTCATCCTTCGCAGCAGCTACAGCTGCAACATCAACAGCAGCAGCAGCAACACTCTCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------A------TGCCACATTG
droFic1 scf7180000454073:1958593-1958847 - AGCAATAGCACAACAAGC-CACAGCAGCAACAACAGCAACAGCAACCACAGCAAC-AGCA------------AC------------A------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATCC---------------------------------GAGCA--------------GCACAAATCACAGCAGCAACGGCGGCAGCTACAAAGACCGAGCAAATGGAGGACAGCAATCACACTCAATCATCACACACCCTCACCCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCAC-------------------------------------------------------ATCCA--------CTCGCACACGCAC----------------ACACACATGGACACGC--------------------------------------ACACGCACTTGGACAGCAGGAGCA-----------------------------------------------------------------------------------------------------------------ACAGCTGCAGCAACAGCAACAGCTCAAT
droEle1 scf7180000491278:205120-205362 - AGCAGC-------------AGCAGCAGCAGCAACTGCAACTGCAGCAGCCGCTG------------------------------------------------GCTGGATACA-CATACACC---------------CA----------------------------------------GAACGAG----------------------------------------------------------------------------G-----------------------ATATCACGAGCAGCACT---------------------------------------------------------TGCCTGCAGCAGCAACACG------------AGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACATCAGCCACAACAGCAATCGCATCTGCAAC-------------------------------------------------------------------------------------------------------A-GCCACAGCAAGATCCTCACAAGACAA---------------------------------GAA--------------------------------------------------------------------------------------CGCACA--------------------AACGCATTAGCT--------------CGCAAAACACCAACTGTAGTAGT-----------------------------------------------------------------------------------------------------AGCCGTAGTTGTAGTC-------CCAATAGTA
droRho1 scf7180000761121:205353-205555 + AACAGCAACTCGGCAACACAGCAGCAGCAACAGCAGCAACAACAGCAGCAACAGC-AGC---AATCCGCCA-GCA------------------A------------------------------------------CGGCGGCACC-------------------------------------------------------------------------TCCACCTCCGCGGCCTTGTCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCCACCCGCACGCC----------------CACAGCAGTCACGCC-------------------------CACAGCGGCCACGCCCACAGCAGCCACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC--ACG------------------------------------CCC----T-----AGCGGTAGC-------------------------------------------------GCACGGCCAT------------------------------------------------------------------------CACGGATTGCT
droBia1 scf7180000302188:2050523-2050741 + AC-TACAGC----------AGCAGCAGCAGCAGCAACAACAGCAACAGCAAC----ATA-----TCCACCA-GCAAC----------------------------------G-C---TCTTTGCTA--------------------------------------CC-----------------------------------------------------------------------------------AGCAACAGGAGGAGCAGCGGCAGC--------------------------------GAC---TTCTAATCCCCACCAGCCACACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAG------------------------CAACAAAGCGGAACGCCAGCGGCGCAGTCGCC--------------GGCCCAAAAGCAGCAGCAGCAGCAACCACATCAATTGC--------------------------------------------------------------------AGACGGTGGCCACGAT----------------------------ACATCA
droTak1 scf7180000415769:157078-157319 + AACAAC-------------CACAACAACAACAACGGGCG-ATCGGCAGCAGCAAT--------------CGC-TTATCATTCGCTGATGCCGAA------------------------------------------CTACTACACCAGCACGC----------GTCAGTTGCACATGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------TG-G--------------------------------------------TCATGCTCGGGGTCATGGGCAGCCACATCCTCATCCCCAAACCCATCCCCATCCTCACCAGCAGCCCCAACCGCACCCGCATCCCCATCCTC------------------------------------------------A--------------------TCAGT------------------ACCAACTGC---------------AGTCGCTGAGCCACTACCAT------------------------------------------------------------------CA---GCAACTTTAACA
droEug1 scf7180000409447:417776-418037 - AACAAC-------------AACAACAACAACATCAGCAACACCAGCAGCAACATC-AC---------------TCACGTTTTCATCATGCACAA------------------------------------------CAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAA---------------CAT--CAATCATCATCGCCGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCGTCCACCAACAAATGCCACCACATCTGCAATAACTAACATGCCCAGCACTTCATCCATAACTCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCCA--------------------------------------------------------------------------------------CCCACA--------------------CACACAGTACCACAGGCACA--------------------------------------------------TGCAGTTGACATCG-----------------------------A-----TGA----------GCTGGTGGACTATGCCGATGTTGCTGAC-----AG---CATACGCGACTA
dm3 chr3R:13957059-13957261 + AACAGC-------------AGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAAGCAGCAGGAGC----TG---------------------------------------CT-CCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCCCTACGACGATGGACGAGCTGCAGCAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCGGCACAGCATGCCGAGCTCTTGGGCTTGACCATGGATTGCACACCTCTC---------TTGCTGAAACAACCGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-------AAGTTACGCCGG-----------------------------------------------------------------------------------------------------AGCCTCCGCCGGCTTC-------CCGGGTCTG
droSim2 2r:17449650-17449895 + AGCAGC-------------AGCAACAACAGCAGCAGCCCCAGCAGCAGCAACAAC-ATC------------------------ATCTCGCCCAA------------------------------------------CAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCATATGAGGAGTCACACGCCCCAGAGTCCA--CATCCTCCGCATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGCAGCTTCAACAACAGCAGCCACAACAGCACTTTAGCTCTCCGCACCACATGCCGCCAATGCACCATCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGCTGATGATGCAACAGCAACATCGCCACAACCAGCGCTCGCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT---------------------------------------------------------------------------------------------------TC-------ACCATCATC
droSec2 scaffold_11:135219-135467 - AACAGC-------------AACAACAACAGCAGCACAATCAGCAACAGCAGCAAC-AGA------------------------A-CACGTACTA------------------------------------------CGACTTCAATAGCAAGTGGAATGCTCC----GCTCAAGACGGAAAACAAT------------------------GCGGCGTCCGTTTCG-----------------------------------------------------------------------------------------------CCGGCGGCCACAATCAACATACCCACATATCCTCACCAGAGCCAACAGCAGCAGCACC------------AGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAAGCG------------------CAGCAACAGCAGC--------------------------------------------------------------------------------------AGCAGCACTTGCCACAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGG------------------------CACACCTGCAGTCTT----------------------------------------------------------------------------C--GC-----AG---GCC-----CAGT
droYak3 X:19163025-19163291 + AGCAGC-------------AGCAGCAGCAACAGCAGCACC-GCAACCACAGCAGC-AGG----------TGCCC------------A------TGGCCAC-------------------------------------CGTACCACCGCTGAGC----------TCC-----------------------------------------------------------------------------------ACGGCCACCT--CGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG---------------------AAG----------------------ACGGCCGCC-----CGC--------------------GCAGCACTGGCTGCTCTGGCCCA-GAGCCATCCACACAACTCCCACAACATACTCAGCTCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC-----------------------------------------------------------------------------------------------------------------------------------------------------TGCCGCACTCGCCCA-ATCCCATCCAGAGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-------CAG------------------------TGCGTCCGGGATTTCCGCAG-----------------------------G-----TGC----------GTTGGGTGCACACGCC---TTGTC----------T---GAAATCATATTC
droEre2 scaffold_4784:6340697-6340953 + AACAAT-------------GGCAGCAGCAACAGCGGCAACAGCAGCAGCAACACG-GGC---GAG-------------TCTGCAACATC-----------------------------GCAGTTGCCGCAGGTCAA-----------------------------------------------GATGGAGGCGATCGATGAGAGCCTGCTGGAGACATTCTCGACCCCATTGCTCAGTCCCCTGGAGATAAAGACC-GAGAAGCAGC--------------------------------AG----------------------------------------------------------------------CGACAAC------------AGCA-----G-CACCAACACCAGCA--------------CCACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAG---CAG------------------------CAGCAA--------------------------------------------------------------------CACCAGCAGCA------------------------------GCAT------------------------------------------------------------------CA---GCAGCAATACCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AACAAC-------------AACAACAACAACAACAGCAACAGCAACAACAGCAAC-GTC------------------------G------------------CCTGGTTACT-CCGTTGTCCGTTG--------------------------------------TC-----------------------------------------------------------------------------------CGTAATATGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGTGGC------------------------------------GGTGCTCTGCCCGTTCCC---ATTGCAGCCATCTCTGCC-----------------------------------------------------------------------------------------------------------------------------------------------------TG-ACCATGCCAAGAGTTATCCATGCCGAACACACACACACAC-------------------------------------------------------AAGCA--------CACACACGCACACACACAGACACGCCCAC------------------------------------------------A--------------------CCA------------------------------------------------------------------------------CTCAGCTGC----------AGTCGGGGCCCGCGCT---TTGTC--AC-----AG---GAACTGTTAATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................AACAACAACAACAACAGCAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
AACAAC-------------AACAACAACAACAACAGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
................................ACAGCAACAGCAACAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.............................ACAACAGCAACAGCAACAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.........................AACAACAACAGCAACAGCAACAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
droVir3
TGCAAC-------------AACAACAACAACAACAACATCAGCAAGCAACGCCCC-AT---------------CAAC---------G------G------------------------------------------TCGCTGCCATAATTTGT-----------------------------------------------------------------------------GGTC---------------TTTTACTGTG--AACTGCTGCTGC--------------------------------TGC---------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTTGTTGTTGGCCCATTGT----------------------------------------------------------------------------------------------------------TGCCG---------------------------------------------------------------CAACCTCAGTGCTGGGCATTATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACGGCTATTAA-------------------------------------------------------------------------------------------------TACATACAC-------------------------------------------------------ATGCA--------CACACACACACAC----------------ACACACATACACATAC--------------------------------------ACACTCAGCCATCTAGTGGGGGCA------------------------------------------------------------------------------------------------------------------GGGTTGGATTC------TCTGTAACGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................GCCCC-AT---------------CAAC---------G------G------------------------------------------TCGCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000001000000000000
.........................AACAACAACAACATCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
...................AACAACAACAACAACAACATCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.......................ACAACAACAACAACATCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
droGri2
AACAAC-------------ATCAACAACAACAACAACAGCAACAGTAACAACGAC-GACA------------AC------------G------ACAACGTCGCCCGGGTACC-CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCTTTGCCCATAATATGACAGGTGGCCACCGACCCAAACCCACTTTCCTGGGCTACCCAGGCGGAGCTGCG--------AGGAGGAATGGCCA---------GA------AAAGCCAGCG------------------CC-----------------------------------------------------CAGTTCCCAGTGCCGGTTGTAGCTGTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCTAGC-----------------AGTCCGTAGCGGCGCT---TTGTC--AC-----AG---GAACTGTTAATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AACAAC-------------AACAACAACATCAAGAGGAGCAGCAGCGGCAACAAC-ATCAGCAGA----TG---------------------------------------CA-C--------------------------TTTAATCATACATAAAGTTGTCT----TC----------------------------------------TTTTTGGTTCGTCTCTCTCATTTGTTAGATCAGTGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG----------------------ACACACACA-----CAC--------------------ACA----------------CACA-CAGACACACACACAACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------CAAACATACGCACACAC------ACAT--ACA------------------------------------CAC----T-----GACAGA-----------------------------------------------------------------------------------------------------CATCCACATC---AAGAC--AC-----AT---GCATAAATGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................ATTTGTTAGATCAGTGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG----------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
......................................................................................................................................................................................................................................TTGTTAGATCAGTGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG----------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
.....................CAACAACATCAAGAGGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACA-----CAC--------------------ACA----------------CACA-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
dp5
AACAAC-------------AGCAACAGCAGCCACAGCAACAGCAACAGCGGCCGC-GCA------------------------G-CC-----------------TCCACAATACAGCTGCAAATTGTTCAAGCTAGCC----------------------------------------AGAG------------------------------------AGCCAGTGCC---------------------ATGTACCAAAGGAACAGC--------------------------------ATTTACAACACCAGTAACAGTGCCACAGCCACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCA------------------------CAGCCAGTGGCAGCAGCAAGAGCAAGACCACC--------------TCTCCAGCAGCAGCAGGAGC----------------------------------------------------------------------------------------------------------AGGA--GC-----AG---GAGCAGTGGCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................AATACAGCTGCAAATTGTTCAAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
............................................................................................................................TGTTCAAGCTAGCC----------------------------------------AGAG------------------------------------AGCCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
.........................................................................................................CCACAATACAGCTGCAAATTGTTCAAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
......................................................................................................................................................................................................................................................................................................................CAGTAACAGTGCCACAGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................AGCAACAGCAACAGCGGCCGC-GCA------------------------G-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGAGCAAGACCACC--------------TCTCCA......................................................................................................................................................2411.0010000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGGAGC----------------------------------------------------------------------------------------------------------AGGA--GC-----AG---G...........2540.2510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGC----------------------------------------------------------------------------------------------------------AGGA--GC-----AG---GAGCAGTG....2070.1410100000000
............................AGCCACAGCAACAGCAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGGAGC----------------------------------------------------------------------------------------------------------AGGA--GC-----A................21200.0510100000000
droPer2
TGCAGC-------------AGCAGCAACAACAGCAACAACAGCAACAGCAGCAGA-ACG------------------------A-CATCGATCA------------------------GCAATTCGCGCAGGTGAACCAACAGTTC------C----------GGGAGCTTAATATGCAATATGATGG----------------------------------------------------------------------------------------------------------------------------------------TGGCAACTTAGAGGATACC------------------------------------------------------------C---------------------------------------------------------TACATCTGCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA---GGAGCAGCCACCTTTGCCTGATGTGCACCAGCAACAGCTGCCAGAGCAGCAGATGCACCAGCAGCAGCAATACTACGAGCC-----------------------------------AACGCCGCAGACGCAGCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCT------------------------------------------------------------------------------------------------------------------------------------------------------------CACGTA---CAGCC--GC-----AG---GAGGAGCTACCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................CGATCA------------------------GCAATTCGCGCAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................................................................................................................................................................................................................................................................................ATACC------------------------------------------------------------C---------------------------------------------------------TACATCTGCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA---GGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................CG------------------------A-CATCGATCA------------------------GCAATTCGCGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCT------------------------------------------------------------------------------------------------------------------------------------------------------------CACGTA---CAGCC--........................1911.001010000
.....................CAGCAACAACAGCAACAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
droAna3
AGCAAC-------------AGCAACAGCAGCAACAGCAACAGCAGCAGCAGCAAC-ATCA------------AC------------A------A------------------------------------------CGATTACACTACTATAT----------GCC-----------------------------------------------------------------------------------ACTGACAGAA--CGTTGCACCTCACCCCCTGATGTGGTGCCTCGAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAATTTCC---ATAATAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAATAA---TAG------------------------CAACAA--------------------------------------------------------------------AATAGGCAACA------------------------------ACAGCAACAGCAACACCAGCAATCTGCAACAGTTGCCGCT----GGCTACG-------CTG--AC-----AG---AAGCTATGGTAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAATAA---TAG------------------------CAAC......................................................................................................................................................................................................2111.001010000
...................................GCAACAGCAGCAGCAGCAAC-ATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102000002
.....................CAACAGCAGCAACAGCAACAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28160.061010000
...............................AACAGCAACAGCAGCAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
..........................GCAGCAACAGCAACAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
................................ACAGCAACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
.......................ACAGCAGCAACAGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
...............................AACAGCAACAGCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------ACAGCAACAGCAACACC......................................................................19200.051010000
..........................GCAGCAACAGCAACAGCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
............................AGCAACAGCAACAGCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.........................................GCAGCAGCAGCAAC-ATCA------------AC------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
............................AGCAACAGCAACAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
droBip1
AATAGC-------------AACAGCAACATCAACAGCAACGGCAACAACCACGTC-AA---------------TTGCAG-------A-----------------------TA-C------------TTCACATAAACA----------------------------------------AAAGCAA----------------------------------------------------------------------------GGCAGC-----------------------------------------------------------------------------------------------------------------------------------AGGCAC---------------------------------------------------------TACAACTGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGTCCAACAGTCCAAGCTGTCTAACTGTCAGATACAGATACACACA--------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------TCACACAAGAGTCACACTCTGGCACATA--------------------------------------------------------------------------------------CGCACA--------------------CACCAAGTCATT------------------CA-----------------------ATCAAC--------------------------------------------------------------------------------------------------------------TTCAGAGGCCGSizeHit CountTotal NormTotal
No Reads
droKik1
AACAAC-------------AACACCAGCAACAGCAGCAGCAGCAACACCAGCAAC-ATG----------GCAGC------------A------ACGCCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATCCA--CTGCTTCCGCCTCCGCCGCCGCCAATTGCTCTGCATC---------------------AG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-----------------------------------GAC---------------------------------------------------------------------------------------------------------------------------------------------CACCAGTGCTT--CCATTGAGCACAGTCATCCTTCGCAGCAGCTACAGCTGCAACATCAACAGCAGCAGCAGCAACACTCTCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------A------TGCCACATTGSizeHit CountTotal NormTotal
No Reads
droFic1
AGCAATAGCACAACAAGC-CACAGCAGCAACAACAGCAACAGCAACCACAGCAAC-AGCA------------AC------------A------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATCC---------------------------------GAGCA--------------GCACAAATCACAGCAGCAACGGCGGCAGCTACAAAGACCGAGCAAATGGAGGACAGCAATCACACTCAATCATCACACACCCTCACCCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCAC-------------------------------------------------------ATCCA--------CTCGCACACGCAC----------------ACACACATGGACACGC--------------------------------------ACACGCACTTGGACAGCAGGAGCA-----------------------------------------------------------------------------------------------------------------ACAGCTGCAGCAACAGCAACAGCTCAATSizeHit CountTotal NormTotal
No Reads
droEle1
AGCAGC-------------AGCAGCAGCAGCAACTGCAACTGCAGCAGCCGCTG------------------------------------------------GCTGGATACA-CATACACC---------------CA----------------------------------------GAACGAG----------------------------------------------------------------------------G-----------------------ATATCACGAGCAGCACT---------------------------------------------------------TGCCTGCAGCAGCAACACG------------AGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACATCAGCCACAACAGCAATCGCATCTGCAAC-------------------------------------------------------------------------------------------------------A-GCCACAGCAAGATCCTCACAAGACAA---------------------------------GAA--------------------------------------------------------------------------------------CGCACA--------------------AACGCATTAGCT--------------CGCAAAACACCAACTGTAGTAGT-----------------------------------------------------------------------------------------------------AGCCGTAGTTGTAGTC-------CCAATAGTASizeHit CountTotal NormTotal
No Reads
droRho1
AACAGCAACTCGGCAACACAGCAGCAGCAACAGCAGCAACAACAGCAGCAACAGC-AGC---AATCCGCCA-GCA------------------A------------------------------------------CGGCGGCACC-------------------------------------------------------------------------TCCACCTCCGCGGCCTTGTCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCCACCCGCACGCC----------------CACAGCAGTCACGCC-------------------------CACAGCGGCCACGCCCACAGCAGCCACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC--ACG------------------------------------CCC----T-----AGCGGTAGC-------------------------------------------------GCACGGCCAT------------------------------------------------------------------------CACGGATTGCTSizeHit CountTotal NormTotal
No Reads
droBia1
AC-TACAGC----------AGCAGCAGCAGCAGCAACAACAGCAACAGCAAC----ATA-----TCCACCA-GCAAC----------------------------------G-C---TCTTTGCTA--------------------------------------CC-----------------------------------------------------------------------------------AGCAACAGGAGGAGCAGCGGCAGC--------------------------------GAC---TTCTAATCCCCACCAGCCACACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAG------------------------CAACAAAGCGGAACGCCAGCGGCGCAGTCGCC--------------GGCCCAAAAGCAGCAGCAGCAGCAACCACATCAATTGC--------------------------------------------------------------------AGACGGTGGCCACGAT----------------------------ACATCASizeHit CountTotal NormTotal
No Reads
droTak1
AACAAC-------------CACAACAACAACAACGGGCG-ATCGGCAGCAGCAAT--------------CGC-TTATCATTCGCTGATGCCGAA------------------------------------------CTACTACACCAGCACGC----------GTCAGTTGCACATGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------TG-G--------------------------------------------TCATGCTCGGGGTCATGGGCAGCCACATCCTCATCCCCAAACCCATCCCCATCCTCACCAGCAGCCCCAACCGCACCCGCATCCCCATCCTC------------------------------------------------A--------------------TCAGT------------------ACCAACTGC---------------AGTCGCTGAGCCACTACCAT------------------------------------------------------------------CA---GCAACTTTAACASizeHit CountTotal NormTotal
No Reads
droEug1
AACAAC-------------AACAACAACAACATCAGCAACACCAGCAGCAACATC-AC---------------TCACGTTTTCATCATGCACAA------------------------------------------CAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAA---------------CAT--CAATCATCATCGCCGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCGTCCACCAACAAATGCCACCACATCTGCAATAACTAACATGCCCAGCACTTCATCCATAACTCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCCA--------------------------------------------------------------------------------------CCCACA--------------------CACACAGTACCACAGGCACA--------------------------------------------------TGCAGTTGACATCG-----------------------------A-----TGA----------GCTGGTGGACTATGCCGATGTTGCTGAC-----AG---CATACGCGACTASizeHit CountTotal NormTotal
No Reads
dm3
AACAGC-------------AGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAAGCAGCAGGAGC----TG---------------------------------------CT-CCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCCCTACGACGATGGACGAGCTGCAGCAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCGGCACAGCATGCCGAGCTCTTGGGCTTGACCATGGATTGCACACCTCTC---------TTGCTGAAACAACCGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-------AAGTTACGCCGG-----------------------------------------------------------------------------------------------------AGCCTCCGCCGGCTTC-------CCGGGTCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................AGCAGGAGC----TG---------------------------------------CT-CCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCCCTACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAGCAGCAGGAGC----TG---------------------------------------CT-CCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCCCTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATGGACGAGCTGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGACCATGGATTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTCTTGGGCTTGACCATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGCAACAACAGCAAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAGCAGCAGCAACAACAGCAAGCAGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................AGCAGCAGCAGCAGCAACAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAGCAGCAGCAACAACAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGCAGCAGCAGCAACAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....GC-------------AGCAGCAGCAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCAGCAGCAGCAACAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GCAGCAGCAACAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
AACAGC-------------AGCAGCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................CAGCAGCAGCAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAGCAGCAGCAGCAGCAGCAACAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..CAGC-------------AGCAGCAGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................GCAGCAGCAGCAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....C-------------AGCAGCAGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.ACAGC-------------AGCAGCAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AGCAGCAGCAACAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGCAGCAGCAGCAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AGCAGCAGCAACAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.......................GCAGCAGCAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCAGCAGCAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAGCAGCAGCAGCAGCAACAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................GCAGCAGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGCAGCAGCAGCAGCAGCAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAGCAGCAGCAGCAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................GCAGCAGCAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....C-------------AGCAGCAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCAGCAGCAGCAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGCAGC-------------AGCAACAACAGCAGCAGCCCCAGCAGCAGCAACAAC-ATC------------------------ATCTCGCCCAA------------------------------------------CAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCATATGAGGAGTCACACGCCCCAGAGTCCA--CATCCTCCGCATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGCAGCTTCAACAACAGCAGCCACAACAGCACTTTAGCTCTCCGCACCACATGCCGCCAATGCACCATCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGCTGATGATGCAACAGCAACATCGCCACAACCAGCGCTCGCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT---------------------------------------------------------------------------------------------------TC-------ACCATCATCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................A------------------------------------------CAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
AACAGC-------------AACAACAACAGCAGCACAATCAGCAACAGCAGCAAC-AGA------------------------A-CACGTACTA------------------------------------------CGACTTCAATAGCAAGTGGAATGCTCC----GCTCAAGACGGAAAACAAT------------------------GCGGCGTCCGTTTCG-----------------------------------------------------------------------------------------------CCGGCGGCCACAATCAACATACCCACATATCCTCACCAGAGCCAACAGCAGCAGCACC------------AGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAAGCG------------------CAGCAACAGCAGC--------------------------------------------------------------------------------------AGCAGCACTTGCCACAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGG------------------------CACACCTGCAGTCTT----------------------------------------------------------------------------C--GC-----AG---GCC-----CAGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................AGAGCCAACAGCAGCAGCACC------------AG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................GCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAAGCG------------------CAGCAACAGCAGC--------------------------------------------------------------------------------------A...................................................................................................................................................................................................................................................................................................................................................................................2711.0010001
AACAGC-------------AACAACAACAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.0610010
...........................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCACC------------AGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000
droYak3
AGCAGC-------------AGCAGCAGCAACAGCAGCACC-GCAACCACAGCAGC-AGG----------TGCCC------------A------TGGCCAC-------------------------------------CGTACCACCGCTGAGC----------TCC-----------------------------------------------------------------------------------ACGGCCACCT--CGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG---------------------AAG----------------------ACGGCCGCC-----CGC--------------------GCAGCACTGGCTGCTCTGGCCCA-GAGCCATCCACACAACTCCCACAACATACTCAGCTCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC-----------------------------------------------------------------------------------------------------------------------------------------------------TGCCGCACTCGCCCA-ATCCCATCCAGAGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-------CAG------------------------TGCGTCCGGGATTTCCGCAG-----------------------------G-----TGC----------GTTGGGTGCACACGCC---TTGTC----------T---GAAATCATATTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..CAGC-------------AGCAGCAGCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010000000
...AGC-------------AGCAGCAGCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010000000
droEre2
AACAAT-------------GGCAGCAGCAACAGCGGCAACAGCAGCAGCAACACG-GGC---GAG-------------TCTGCAACATC-----------------------------GCAGTTGCCGCAGGTCAA-----------------------------------------------GATGGAGGCGATCGATGAGAGCCTGCTGGAGACATTCTCGACCCCATTGCTCAGTCCCCTGGAGATAAAGACC-GAGAAGCAGC--------------------------------AG----------------------------------------------------------------------CGACAAC------------AGCA-----G-CACCAACACCAGCA--------------CCACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAG---CAG------------------------CAGCAA--------------------------------------------------------------------CACCAGCAGCA------------------------------GCAT------------------------------------------------------------------CA---GCAGCAATACCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................AGAAGCAGC--------------------------------AG----------------------------------------------------------------------CGACAAC------------AGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..........................GCAACAGCGGCAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1411000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCA------------------------------GCAT------------------------------------------------------------------CA---GC..........18100.1010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAG------------------------CAGCAA--------------------------------------------------------------------CACCAGCAGCA------------------------------.......................................................................................25100.1010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------------------------------------------------------------------------AG.................................................................................................................................................................................................................................................21130.0810001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCA--------------CCACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................22170.0610001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCA.........................................................................................................................................................................................................................................25200.0510001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG---CAG------------------------CAGCAA--------------------------------------------------------------------CA..............................................................................................................................22200.0510001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAG---CAG------------------------CAGCAA--------------------------------------------------------------------CA..............................................................................................................................21200.0510000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG---CAG------------------------CAGCAA--------------------------------------------------------------------CACCA...........................................................................................................................21200.0510000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAG---CAG------------------------CAGCA.....................................................................................................................................................................................................25200.0510000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA------------------------------GCAT------------------------------------------------------------------CA---GCAGCAA.....19200.0510000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------------------------------------------------------------------------AGC................................................................................................................................................................................................................................................20200.0510000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CA--------------CCACCAGCAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000

Generated: 05/17/2015 at 10:48 PM