ID:

dmo_625

 Coordinate:

scaffold_6473:1199221-1199371 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.5 -23.3 -23.3

Flybase annnotation

exon [dmoj_GLEANR_16091:3]; CDS [Dmoj\GI15345-cds]; intron [Dmoj\GI15345-in]

Repeatable elements

NameClassFamilyStrand
(TC)nSimple_repeatSimple_repeat+
Homo6DNAhAT-Pegasus+
DNAREP1_DMRCHelitron+
mature
  1. scaffold_1689:1116-1139 -
  2. scaffold_3223:291-314 -
  3. scaffold_6328:1185028-1185051 -
  4. scaffold_6427:44552-44575 -
  5. scaffold_6470:31120-31143 -
  6. scaffold_6473:14515986-14516009 -
  7. scaffold_6482:1835276-1835299 -
  8. scaffold_6496:24358756-24358779 -
  9. scaffold_6496:26064587-26064610 -
  10. scaffold_6498:572959-572982 -
  11. scaffold_6498:2774589-2774612 -
  12. scaffold_6498:3241201-3241224 -
  13. scaffold_6500:23048376-23048399 -
  14. scaffold_6500:31005463-31005486 -
  15. scaffold_6500:31439291-31439314 -
  16. scaffold_6500:32305937-32305960 -
  17. scaffold_6540:10768571-10768594 -
  18. scaffold_6540:16961216-16961239 -
  19. scaffold_6680:22853228-22853251 -
  20. scaffold_6680:23024804-23024827 -
  21. scaffold_191:813-836 +
  22. scaffold_6171:4624-4647 +
  23. scaffold_6328:1042360-1042383 +
  24. scaffold_6368:43969-43992 +
  25. scaffold_6460:856-879 +
  26. dmo_625  scaffold_6473:1199280-1199303 +
  27. scaffold_6473:6983154-6983177 +
  28. scaffold_6473:16260866-16260889 +
  29. scaffold_6482:348608-348631 +
  30. scaffold_6496:1008395-1008418 +
  31. scaffold_6496:9531065-9531088 +
  32. scaffold_6496:26334809-26334832 +
  33. scaffold_6498:738172-738195 +
  34. scaffold_6498:1069390-1069413 +
  35. scaffold_6500:30853893-30853916 +
  36. scaffold_6540:22371952-22371975 +
  37. scaffold_6541:479456-479479 +
  38. scaffold_6541:926028-926051 +
  39. scaffold_6680:20414544-20414567 +
  40. scaffold_6680:23737850-23737873 +
star
  1. scaffold_191:863-887 +
  2. scaffold_199:1142-1166 +
  3. scaffold_249:509-533 +
  4. scaffold_1666:9658-9682 +
  5. scaffold_4031:197-221 +
  6. scaffold_5820:4166-4190 +
  7. scaffold_6328:1042410-1042434 +
  8. dmo_625  scaffold_6473:1199330-1199354 +
  9. scaffold_6473:5067584-5067608 +
  10. scaffold_6473:16260916-16260940 +
  11. scaffold_6482:2734384-2734408 +
  12. scaffold_6496:17610438-17610462 +
  13. scaffold_6498:738222-738246 +
  14. scaffold_6498:3333578-3333602 +
  15. scaffold_6500:7845815-7845839 +
  16. scaffold_6540:3488489-3488513 +
  17. scaffold_6540:22372002-22372026 +
  18. scaffold_6540:33612888-33612912 +
  19. scaffold_6680:20414594-20414618 +
  20. scaffold_6680:23513327-23513351 +
  21. scaffold_2643:683-707 +
  22. scaffold_6387:29492-29516 +
  23. scaffold_6468:11476-11500 +
  24. scaffold_6482:2069566-2069590 +
  25. scaffold_6498:2005923-2005947 +
  26. scaffold_6500:15130915-15130939 +
  27. scaffold_6500:19513700-19513724 +
  28. scaffold_6500:29742357-29742381 +
  29. scaffold_6500:29993286-29993310 +
  30. scaffold_6500:29997800-29997824 +
  31. scaffold_6500:30321137-30321161 +
  32. scaffold_6500:30645077-30645101 +
  33. scaffold_6540:398701-398725 +
  34. scaffold_6540:1868260-1868284 +
  35. scaffold_6540:1965175-1965199 +
  36. scaffold_6540:24001383-24001407 +
  37. scaffold_6540:24006162-24006186 +
  38. scaffold_6541:1450484-1450508 +
  39. scaffold_6576:2613-2637 +
  40. scaffold_6680:17958128-17958152 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCTCGATCGCCGAATATTACTGCACCAAGTCCATGGGCAATGGCTTCAAGGTGACTCTTTACAGATATCTCTCTCTTTATCTCTTTATCTCTCTCTCTCTCTTTCTATTTTTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGTGAAAAGTATGTAACAGGCAGAAGGAATCATCGCAGACCCCATAATGTATATATATTCTTGATCAGGACGACGAGCTGAGTCGATATAGCCC
*************************************************************************************************************.(((((((((((.((((((...))))))...)))))))))))...((((((................))))))..******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
..............................................................................................................................................................................................................................CAGGACGACGAGCTGAGTCGA........ 21 0 20 0.20 4 1 0 2 1
.........................................................................................................................................................................................................................TTGATCAGGACGACGAGCTGAG............ 22 0 20 0.15 3 3 0 0 0
....................................................................................................................................................................................................................TATTCTTGATCAGGACGACGAGCTG.............. 25 0 20 0.10 2 2 0 0 0
.............................................................................................................TTTATACCCTGAACCCATTGAAAA...................................................................................................................... 24 0 20 0.10 2 0 2 0 0
...................................................................................................................................................................................................................ATATTCTTGATCAGGACGACGAGCT............... 25 0 20 0.05 1 0 1 0 0
...............................................................................................................................................................TGAAAAGTATGTAACAGGCAGAAGG................................................................... 25 0 20 0.05 1 1 0 0 0
................................................................................................................................GAAAATGGGAAATCAGGGTATAATG.................................................................................................. 25 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................................TTGATCAGGACGACGAGCTGAGT........... 23 0 20 0.05 1 0 1 0 0
.............................................................................................................................ATTGAAAATGGGAAATCAGGGTATAATG.................................................................................................. 28 0 20 0.05 1 0 0 1 0
...................................................................................................................................................................................................ACCTCATAATGTATATATATTCTTGATC............................ 28 1 20 0.05 1 0 1 0 0
.........................................................................................................................................................................................................................TTGATCAGGACGACGAGCTGAGTCG......... 25 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................CAGAAGGAATCATCGCAGACC..................................................... 21 0 20 0.05 1 0 0 1 0
.....................................................................................................................................................................................AGGAATCATCGCAGACCCCATA................................................ 22 0 20 0.05 1 1 0 0 0
...............................................................................................................................TGAAAATGGGAAATCAGGGTATAATG.................................................................................................. 26 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

GGAGCTAGCGGCTTATAATGACGTGGTTCAGGTACCCGTTACCGAAGTTCCACTGAGAAATGTCTATAGAGAGAGAAATAGAGAAATAGAGAGAGAGAGAGAAAGATAAAAATATGGGACTTGGGTAACTTTTACCCTTTAGTCCCATATTACCAAAACACTTTTCATACATTGTCCGTCTTCCTTAGTAGCGTCTGGGGTATTACATATATATAAGAACTAGTCCTGCTGCTCGACTCAGCTATATCGGG
*******************************************************************.(((((((((((.((((((...))))))...)))))))))))...((((((................))))))..************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V056
head
 M060
embryo
...................................................................................................................................................................................................TGGGGTATTACATATATATAAGAACT.............................. 26 0 6 0.17 1 1 0 0
....................................................................................................................................................................................................GGGGTATTACATATATATAAGAACTA............................. 26 0 6 0.17 1 1 0 0
....................................................................................................................................................................................................GGGGTATTACATATATATAAGAACT.............................. 25 0 6 0.17 1 1 0 0
................................TACGCGTTACCGATGGTCCA....................................................................................................................................................................................................... 20 3 10 0.10 1 0 1 0
.........................................................................................................................................................................CATTGTCCGTCTTCCTTAGTA............................................................. 21 0 20 0.05 1 1 0 0
............................................................................................................................................................................................................................TAGTCCTGCTGCTCGACTCAGCTAT...... 25 0 20 0.05 1 1 0 0
.................................................................................................................................................................................................................................CTGCTGCTCGACTCAGCTATATC... 23 0 20 0.05 1 0 0 1
......................................................................................................................................................................................................................AAGAACTAGTCCTGCTGCTCGACTC............ 25 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:1199171-1199421 + dmo_625 CCTCGATCGCCGAATA---TTACT--------GC-------------ACCAAGTCCATGG-----------GCAATGGCTTCAAGGTG-------ACT----------------CTTTACAG-------------------------------ATA----------TC-----------------TCTCTCT-------------------------------TT--------------------------ATCTCTTTATCTCTCT---------------------C--TCTCT-------------------CTT---------------------TCTATTTTTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGT-G-------AAAAGTATGTAACAGGCAGAAGGAATCATCGCAGACCCCATAATGTA-------------TA--TATATTCTTGATCAGGACGACGAGCTGAGTCGATATAGCCC
droVir3 scaffold_13324:78043-78279 + ACTGCTCC--------AC----------------------------------GTCCA--------------------------------------------------G-CGTT--------------TCCATGTAGCT------CG------------------------------------------------------------CACTTGTCAATTATT------T----------TATATATATATATATATATATATTTTCCT---------------------T--------------------------TCT---------------------TCTCTTTTTATACCCTGAACCCAATAAAAATGGG-TATAAGGGTATATTGTATTTGTGCGAAATCCAAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCATAAAGTA-------------TA--TATATTCTTGATCAGCATCAATAGACGAGTCGATCTACCCA
droGri2 scaffold_15203:1814744-1814936 + ACGCTT---------------------------------------------------------------------------------------------------------------A-------AC----A-----------------------------------------------CAATTTT-TT-----------------------------CT--TTTTTT-TGCGTT------------------------------------------------TTTCATTTT-----------------------TCA---------------------TTTCTTTTTATACCCTGAATCCTTTAAAAATGGT-TAAAAGGGTATAATGGTTTTGTGC-------AAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCTCATAAAGTA-------------TC--TATATTCCTGATCAGGATCAACAACCGAGTCGATATAGCCA
droWil2 scf2_1100000000608:1615-1855 + TCTTGTTCAG----------------------ACAATGCTTTTAT--AT-------------------------------------------------------------------------------------CAG----------------GTA----------TTGTCAATAGTGTT------AGA---TCGT----------ATAGATCT------TTTTCTT-CTAT-----------------------------------TTCTGCCT-------CGCTTGTTTC-AGATTCTTCACCTTCT------TGC---------------------TCAGTTTTTATACCCTT-----GC----A-------CAAAGGGTATATTAATTTTGGTC-------AAAAGTGTGCAACGCATAGAAGGAAGCATCTCCGACCATATAAAGTA-------------TA--TATATTCTTGATCAGCACGACGAGACGAGTTCAAATAGCCA
dp5 Unknown_group_43:70804-71047 + GCCAAAT--------G---ACATT--------GC-------------GG-----------GAGTTATAAGGTCAATGAGTTAAACTTG-------GCT----------------ACGCAGAG-------------------------------AAA----------GA-----------------GCAATTC-------------------------------CG--------------------------ATCATA-------------------ATAGG-------TCCTTCT------------GT------ATC---------------------TTGATATTTATACCCGATACTCAA----AATGAG-TATTGGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACATCCTGAAGGAATCGTTTCCGACACCATAAAGTA-------------TA--TATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCC
droPer2 scaffold_757:9000-9253 + CTTCTATTGCGG---TATGTTGAA--------CA-------------ACCATGTAC---------------------------------------------------------------------------------ATACG-------GGCGATAATTAAAGCCGA-------------------------TCGG----------CTAGTAAT------TTTTCTT-TCAC-----------------------------------GTTTGCCT-------TCTTTGTATA-------------TTAT------TAT---------------------CATATTTTTATACCCGATACTCAA----AATGAG-TATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATCAAGTA-------------TA--TATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCA
droAna3 scaffold_13099:859865-860089 - CTTCACTTGCAT---ATTATTACC--------ATCGAATTC-----------------G------------GGTATAATTTTTGCGAA-------ATT----------------TTCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTTTT--------------------GGAC--------------------------------------TTCGTCTGCCCGAATTTTTATACCCTT-----GC-------------AGAGGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAATA-------------TA--TATATTTTTGATCAGGACCACCTCCTGAGTCGATATAAGCA
droBip1 scf7180000391611:6741-6965 - TCTCATCAGT----------------------GTA------------------------------------------------------------------------A-TTTT--------------TCTG-----------------------TG----------TT-----------C------AAATCCTCGTAAGGACTTTGAACTTTTT------CTTTCTTT-TATAAA-----------------------------------------------------------------------TATTATCATTTTTTTTT------CTTTAA--TTGAAATATTTATACCCTT-----GC-------------AGAGGGTATTATAATTTTGTCC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTA-------------TA--TATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCA
droKik1 scf7180000302392:103471-103661 + ATTGG----------------------------------------------------------------------------------------------------GAA-TTTTT-------------TCAAAGTTGTT------TGCT---------------------------------------------------------------GT----------------CATATATTTT--------------------ATATTTTT--------------------ATAT--------------------------------------TTCTATTTTATATATTTTTATACCCTT-----GC---------------AGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTA-------------TA--TATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCA
droFic1 scf7180000453932:687580-687779 + CAAAAT---G----------------------A------------------------------------------------------------------------CAA-TCTTT----ATGG---------A----CTTACATTTGCT---------------------------------------------------------------TT---TTA---ATTTC-----------------------------T--ATATAAT--------------------AATA---------------TTAT------TAT---------------------TATATTATTATACCCTT-----GC----A--GAG-CA-AAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAATGTA-------------TATATATATTCTTGATCAGCATCACCATCTGAATCGAAATATGTA
droEle1 scf7180000489254:718-941 + GTTATAT-GCAG---TATGTTAGT--------GCAGTGTTT-----------------GT-----------GTTATATTTTCTGTGTA-------ACA----------------TTTCACAGTTTCT-----------------------------------------------------------------------GG----------TTAT------TTATTTG-TATA--------------------------------------------G---------AATT---------------TTAC------CAC---------------------GGTTTTGTTATACTCTT-----GC-------------AGAGGTTATTATAGTTTCATTC-------AGAAGTTTGCAACCCAGTGAGCGGGACATTTCCAACCCTATAAAGTA-------------TA--TATATTCTTGATCACCATCACTAGGAGAGTCGATCTAACCA
droRho1 scf7180000776633:1187-1412 + ACTTTATT--------AA----------------------------------GTCC-TGA-----------AAAATTACTTTTAAACA-------ACT----------------CTT----------------------------------------------------------------------------------------------------------CCCTT-ATTGTC-----------------------------------------------------------------------TTTATTCCTTTTTTTTTGCCAAATTCTACTGTTGACATAATTATACCCGTTACTCGT----G--GAG-TAAAAGGGTATATTGTATTCGTGC-------AAAAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCAATAAAGTA-------------TA--TATATTCTTGTTCAGGATCACTAGCCGAGTCGATCTAGCCA
droBia1 scf7180000302069:409964-410184 + GGTCGCC----GAATA---TGATT--------TC-------------TA-----------GACCTTCAGTGCCAA--------------------------------------------------------------------------------------------------TAAGCTG------AGA----------------GACAATCCT------TTTTGTCT-CCTGAT--------------------------------------------------TGGCAC--AAT-------------------TTT---------------------TTTATTTTTATACCCGTTACTCGC----A--GGG-CAAAAGGGTATACTAGATTTGCCC-------G-AAATGTGTAACAGGTGAGAGGAAGCCTT-TCGACCCCGTAAAGTA-------------TA--TATATTCTCGATCAGGATCACTAGCCGAGTCGATCTCGCCA
droTak1 scf7180000415843:961844-962077 - TTATT---------------------------ACAATACTTCTATAATTAACT---------------------------------------------------------------------------------GATTTCCA-------GTTGATATTTTTAGATGA-------------------------TCCTCAGG----------TTAT------CTGTTTT-TAGA--------------------------------------------A---------AATG----------TCACCTTAT------ACC---------------------TATATTTTTATACCCGTTACTCGT----A--GAG-TAAAAGGGTATACTAGATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTA-------------TA--TATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCA
droEug1 scf7180000409705:11716-11909 - GTAACG-----------------------------------------------------------------------G---------------------------CTG-TGTTTCTTGATAA-------------------------------TTA----------T-----------------------------------------------------TT--------------TTC--------------------ATCTTTCT--------------------TTACTCTCA-------------------CTT---------------------TTTATTTTTATACCCGTTACTCGT----A--GAG-TAAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGATAGAAGGAAGCTTTTGCGACCCTATAAAGTA-------------TA--TATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCA
dm3 chr2R:892591-892807 + GCAATC-----------------------------------------------------------------------A-----------------------------------------------ATTCTAACTTATT------TTTTAACAGATA----------TT-----------T------AGATCTTACTAACG----------T---------------------------------------------TTAATATTTAT---------------------TAT--TCT-----TAT---TT------TAT---------------------ATTATATTTTTACCCGATACTTGT----A--GAG-TAATATGATATACTAGATTCATTG-------AAAACTATGTAGCAGGCAGAAGGAAGGGCTTCCGACCATATAAAGTA-------------TA--TATATTCTTGATCAGGATCAATGGCCGAGTCGATCTAGCCA
droSim2 x:20611140-20611338 - GTGACTT--------------------------------------------------------------------------------------------TTTAGGCCGGTCT-G-----------------------------------------------------------------TAAACTT-TC-----------------------------CT--GTTCCC--------------------------------CCT--------------------TTTTTTCCTCCCT-------------------TAT---------------------CCTTATTATATACCCGTTACCCGT----A--GAG-TAAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAAGAAGCGTTTCCGGCTATTAAAAGTA-------------TA--TATATACTTGATTAAGATCAATAGCCGAGTTGATCTAGCCA
droSec2 scaffold_28:352261-352505 + CTTTGCA---------AA----------------------------------GTACATGG-----------AAAATAACATCATGGTACAACAAAATTTCTAAGGCAAGCTT-T--TA-------AT----A-----------------------------------------------CAATTTT-TA-----------------------------TT--AATTTT--------------------------------CTA--------------------TTCTATTTTTCAA-------------------CAA---------------------ATTAATTTTATACTCATTACGCGT----A--GAG-TAAAAGGGTATACTAGAATCGTTG-------AAAAAT---------GTAGAAGGAAGCATTTCCGACCATATACAGTATATATATACAGTATA--TATATTCTTGATCAGGATCAATAGCTAAGTCGATCTGGCC-
droYak3 2R:2919650-2919893 - CGGTTATC---CGATA---TTATTTCGCTAATTCGATACTTTTAT--TT-------------------------------------------------------------------------------------CAA----------------G-------------------CAAACGG---------------------------------------------------------------------GTACCTACCTACCCTCTCTCCTACCCCATCGGTCCTTTGCAT--AAT-----------TT------TTC---------------------ATGATTTTTATACCCGTTACTCGT----A--GAG-TAAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAGTGTTTCCGTCCATATAAAGTA-------------TA--TATATTCTTGATCAGGATCAATAGCCGAGTCAATTTGGCCA
droEre2 scaffold_4770:15880223-15880431 + AATGTTT--------------------------------------------------------------------------------------------CTAGCGCAATTCT-C---TAAAA-------------------------------A------------------------------------------------------------------T------C----------TGCATTTAAATTTAGAAATTCATTTTTTT---------------------T--TAAAT-------------------TTT---------------------TTTGTAATTATACCCGTTACTCGA----A--GAG-TAAAAGGGTATACTAGATTTGTTT-------AAAAGTATGTAACATGCAGAAGGAAGCGTTTGCGACCTCATAAAGTA-------------TA--TATATTCTTGATCAGGATCAATAGCCGAGTCAAACTGGCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCTCGATCGCCGAATA---TTACT--------GC-------------ACCAAGTCCATGG-----------GCAATGGCTTCAAGGTG-------ACT----------------CTTTACAG-------------------------------ATA----------TC-----------------TCTCTCT-------------------------------TT--------------------------ATCTCTTTATCTCTCT---------------------C--TCTCT-------------------CTT---------------------TCTATTTTTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGT-G-------AAAAGTATGTAACAGGCAGAAGGAATCATCGCAGACCCCATAATGTA-------------TA--TATATTCTTGATCAGGACGACGAGCTGAGTCGATATAGCCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGACGAGCTGAGTCGA........21200.204110002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGACGACGAGCTGAG............22200.153300000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGACGACGAGCTG..............25200.102200000
.........................................................................................................................................................................................................................................................................................................................................................TTTATACCCTGAACCCATTGAAAA.............................................................................................................................................24200.102000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGACGACGAGCT...............25200.051000010
...........................................................................................................................................................................................................................................................................................................................................................................................................T-G-------AAAAGTATGTAACAGGCAGAAGG..................................................................................25200.051100000
............................................................................................................................................................................................................................................................................................................................................................................GAAAATGGGAAATCAGGGTATAATG.........................................................................................................................25200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGACGACGAGCTGAGT...........23200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................ATTGAAAATGGGAAATCAGGGTATAATG.........................................................................................................................28200.051000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGACGACGAGCTGAGTCG.........25200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGAATCATCGCAGACC....................................................................21200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATCATCGCAGACCCCATA...............................................................22200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................TGAAAATGGGAAATCAGGGTATAATG.........................................................................................................................26200.051000010
droVir3
ACTGCTCC--------AC----------------------------------GTCCA--------------------------------------------------G-CGTT--------------TCCATGTAGCT------CG------------------------------------------------------------CACTTGTCAATTATT------T----------TATATATATATATATATATATATTTTCCT---------------------T--------------------------TCT---------------------TCTCTTTTTATACCCTGAACCCAATAAAAATGGG-TATAAGGGTATATTGTATTTGTGCGAAATCCAAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCATAAAGTA-------------TA--TATATTCTTGATCAGCATCAATAGACGAGTCGATCTACCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAGAAG...................................................................................25205.6011200000000000000000000000011200000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAGAAGGA.................................................................................27203.20640000000000000000000000000006400000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAGAAGG..................................................................................26202.70540000000000000000000000054000000000000000000000000000000000000000
....................................................................................................................................GTAGCT------CG------------------------------------------------------------CACTTGTCAATTATT------T----------TA..............................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.....................................................TCCA--------------------------------------------------G-CGTT--------------TCCATGTAGCT------CG------------------------------------------------------------CACT............................................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TATTTTCCT---------------------T--------------------------TCT---------------------TCTCTTTTTATACCC............................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAG.................23200.85170000000000000000000000000000001700000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGACGAG............25200.6513000010000000000000000000001100000080002000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAAAATGGG-TATAAGGGTATAT...........................................................................................................................24200.5010002000003000000000000000020011000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAGACG..............27200.357000000000000000000000000010000000051000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAG......................................................................................22200.306000000000000000000000000000600000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCATC...........................................................................25200.255100000000000000000000000040000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAG.................24200.255000000000000000000000001000000000000000400000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGACGAG............24200.255000001000000000000001000100000000010001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGACGAGTCGATCTA....26200.204000000000000000000000000010000000200001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGACGAGTCG.........21200.153000000000000000000000000000000000300000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGACGAGTCGAT.......27200.153100000000000000000000000100000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAAAATGGG-TATAAGGGTATATT..........................................................................................................................25200.153000000001000000000000000000020000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAAATGGG-TATAAGGGTATATTGTAT......................................................................................................................26200.153000000000000000000000000020100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAAAATGGG-TATAAGGGTATATTGT........................................................................................................................27190.112000000000000000000000000011000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAAAATGGG-TATAAGGGTATATTG.........................................................................................................................26190.112001000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAATGTATGTAACAGGCAGAAG...................................................................................26200.102000000000000000000000000000000000200000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGACGAGTCG.........28200.102000000000000000000000000000000000020000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TATATTGTATTTGTGCGAAATCCAAATG....................................................................................................28200.102000000000000000000000000001010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAGCATCTCCGACC....................................................................22200.102000000000000000000000000000000200000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAGAA....................................................................................24200.102000000000000000000002000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGACG..............26200.102000000000000000000000000001010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGACGAGTCGATC......28200.102000000000000000000000000000000000020000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATCT..........................................................................22200.102000000000000000000002000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGGAAGCA.............................................................................26200.102000000000000000000000000000000000020000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AATGTATGTAACAGGCAGAAGGAAG...............................................................................25200.102000000000000000000000000000200000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAATGTATGTAACAGGCAGAAGG..................................................................................27200.102000000000000000000000000000000020000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCAT............................................................................24200.102000000000000000000000000002000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TAAAAATGGG-TATAAGGGTATATTGT........................................................................................................................26200.102002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATC...........................................................................21200.102000020000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCATCAATAGACGAG............27200.102001000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATCTCCGACC....................................................................28200.102002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGACGAGTCG.........26200.102000000000000000000001000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AACCCAATAAAAATGGG-TATAAGGGT...............................................................................................................................26140.071000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATA..................22200.051000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGACGA.............27200.051000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AAAAATGGG-TATAAGGGTATAT...........................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGAC...............25200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATTTGTGCGAAATCCAAAT.....................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGACGAG............21200.051000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGACG..............23200.051000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAAAATGGG-TATAAGGGTA..............................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTGTATTTGTGCGAAATCCAAA......................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGAAGCA.............................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGACGAGTCG.........27200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGGA.................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAGAAGGAAG...............................................................................29200.051000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGACGAGTCGAT.......23200.051000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAGCATCTCC........................................................................25200.051100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAAAATGGG-TATAAGGGTATATC..........................................................................................................................25200.051000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGACGAGTCGAT.......21200.051000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGACG..............19200.051000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAATCCAAATGTATGTAACAGGCAG......................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCATCT..........................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATCTCCG.......................................................................25200.051000001000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCGAAATCCAAATGTATGTAACAGGC........................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTA-------------TA--TATATTCTTGATCAGC.........................24200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATTTGTGCGAAATCCAAA......................................................................................................25200.051000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGACGAG............28200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GGG-TATAAGGGTATATTGTATTTGTGC................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATCTC.........................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTA-------------TA--TATATTCTTGATCAGC.........................25200.051000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGACGAGT...........23200.051000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGACGAGTCGATC......27200.051000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCGAAATCCAAATGTATGTAACA...........................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGAAGCATCT..........................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATAGACGAGTCGATCT.....20200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATAAGGGTATATTGTATTT....................................................................................................................19200.051000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGACGAGTCGATCTA....20200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGAAATCCAAATGTATGTAACAGGC........................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAAAGTA-------------TA--TATATTCTTGATCAGCA........................28200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTGCGAAATCCAAATGTATGTAACAGG.........................................................................................27200.051000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCA.............................................................................18200.051000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGCGAAATCCAAAT.....................................................................................................19200.051000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAAT...................21200.051000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGACGAGTC..........26200.051000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGACG..............22200.051000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTGTATTTGTGCGAAATCCAAATG....................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGACGAGTCGA........26200.051000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ATGGG-TATAAGGGTATATTGT........................................................................................................................21200.051000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAAAATGGG-TATAAGGGTATA............................................................................................................................23200.051000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGAAGCATCTCCGACCCCAT................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGAAGC..............................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGAAG...............................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAATCCAAATGTATGTAACAGGCAGA.....................................................................................26200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGA................21200.051000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAATAGACGAGTCGATCTA....25200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGAGT..............26200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGACGAGTCGA........28200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGTATGTAACAGGCAGAAGGA.................................................................................25200.051000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA-------------TA--TATATTCTTGATCAGCA........................22200.051000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGACC..............26200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAATAG.................21200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCATCTCC........................................................................28200.051000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGA................24200.051000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGAC...............21200.051000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCATCAATAGACGAGT...........28200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................AAGGGTATATTGTATTTGTGCGAA.............................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCATCAATAGACGA.............26200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTA-------------TA--TATATTCTTGATCAGCAT.......................24200.051000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGACGAGT...........26200.051000000000000000000000000000000000010000000000000000000000000000
droGri2
ACGCTT---------------------------------------------------------------------------------------------------------------A-------AC----A-----------------------------------------------CAATTTT-TT-----------------------------CT--TTTTTT-TGCGTT------------------------------------------------TTTCATTTT-----------------------TCA---------------------TTTCTTTTTATACCCTGAATCCTTTAAAAATGGT-TAAAAGGGTATAATGGTTTTGTGC-------AAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCTCATAAAGTA-------------TC--TATATTCCTGATCAGGATCAACAACCGAGTCGATATAGCCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCAT............................................................................18200.05101
droWil2
TCTTGTTCAG----------------------ACAATGCTTTTAT--AT-------------------------------------------------------------------------------------CAG----------------GTA----------TTGTCAATAGTGTT------AGA---TCGT----------ATAGATCT------TTTTCTT-CTAT-----------------------------------TTCTGCCT-------CGCTTGTTTC-AGATTCTTCACCTTCT------TGC---------------------TCAGTTTTTATACCCTT-----GC----A-------CAAAGGGTATATTAATTTTGGTC-------AAAAGTGTGCAACGCATAGAAGGAAGCATCTCCGACCATATAAAGTA-------------TA--TATATTCTTGATCAGCACGACGAGACGAGTTCAAATAGCCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................TGTTTC-AGATTCTTCACCTTCT------TGC---------------------TC.........................................................................................................................................................................27204.2585084010
..................................................................................................................................................................................................................................................................................................TC-AGATTCTTCACCTTCT------TGC---------------------TCAGT......................................................................................................................................................................2634.0012012000
..................................................................................................................................................................................................................................................................................................TC-AGATTCTTCACCTTCT------TGC---------------------TCAGTT.....................................................................................................................................................................2733.6711011000
..............................................................................................................................................................................................................................................................................................TGTTTC-AGATTCTTCACCTTCT------TGC---------------------...........................................................................................................................................................................25203.4068067010
.................................................................................................................................................................................................................................................................................................TTC-AGATTCTTCACCTTCT------TGC---------------------TCAG.......................................................................................................................................................................2633.331008020
.................................................................................................................................................................................................................................................................................................TTC-AGATTCTTCACCTTCT------TGC---------------------TCAGT......................................................................................................................................................................2733.00909000
..........................................................................................................................................................................................................................................................................................CGCTTGTTTC-AGATTCTTCACCTTCT------...................................................................................................................................................................................................26201.8537035020
...................................................................................................................................................................................................................................................................................................C-AGATTCTTCACCTTCT------TGC---------------------TCAGT......................................................................................................................................................................2531.67505000
.................................................................................................................................................................................................................................................................................................TTC-AGATTCTTCACCTTCT------TGC---------------------TCAGTT.....................................................................................................................................................................2831.67505000
...................................................................................................................................................................................................................................................................................................C-AGATTCTTCACCTTCT------TGC---------------------TCAGTT.....................................................................................................................................................................2631.33404000
................................................................................................................................................................................................................................................................................................................................................................................................TATTAATTTTGGTC-------AAAAGTGTGCAA.............................................................................................26201.0020000200
................................................................................................................................................................................................................................................................................................TTTC-AGATTCTTCACCTTCT------TGC---------------------TCAGTT.....................................................................................................................................................................2930.67202000
..................................................................................................................................................................................................................................................................................T-------CGCTTGTTTC-AGATTCTTCACCTTCT------...................................................................................................................................................................................................27200.6012012000
..............................................................................................................................................................................................................................................................................................................................................................................................TATATTAATTTTGGTC-------AAAAGTGTG................................................................................................25200.5511000110
..............................................................................................................................................................................................................................................................................................TGTTTC-AGATTCTTCACCTTCT------TG.................................................................................................................................................................................................24200.5010010000
................................................................................................................................................................................................................................................................................................TTTC-AGATTCTTCACCTTCT------TGC---------------------TC.........................................................................................................................................................................25200.40817000
.....................................................................................................................................................................................................................................................................................................AGATTCTTCACCTTCT------TGC---------------------TCAGT......................................................................................................................................................................2430.33101000
..................................................................................................................................................................................................................................................................................................TC-AGATTCTTCACCTTCT------TGC---------------------TCAG.......................................................................................................................................................................2530.33100010
..............................................................................................................................................................................................................................................................................................TGTTTC-AGATTCTTCACCTTCT------TGC---------------------TCAG.......................................................................................................................................................................2930.33101000
.................................................................................................................................................................................................................................................................................................TTC-AGATTCTTCACCTTCT------TGC---------------------TCA........................................................................................................................................................................2530.33101000
................................................................................................................................................................................................................................................................................................TTTC-AGATTCTTCACCTTCT------TGC---------------------TCA........................................................................................................................................................................2630.33101000
...................................................................................................................................................................................................................................................................................................C-AGATTCTTCACCTTCT------TGC---------------------TCAGTTT....................................................................................................................................................................2730.33101000
..........................................................................................................................................................................................................................................................................................CGCTTGTTTC-AGATTCTTCACCTTC..........................................................................................................................................................................................................25200.30606000
.............................................................................................................................................................................................................................................................................................TTGTTTC-AGATTCTTCACCTTCT------TG.................................................................................................................................................................................................25200.30606000
.................................................................................................................................................................................................................................................................................................TTC-AGATTCTTCACCTTCT------TGC---------------------TC.........................................................................................................................................................................24200.30604020
...............................................................................................................................................................................................................................................................................................GTTTC-AGATTCTTCACCTTCT------TGC---------------------...........................................................................................................................................................................24200.25505000
..............................................................................................................................................................................................................................................................................................TGTTTC-AGATTCTTCACCTTCT------...................................................................................................................................................................................................22200.25505000
..................................................................................................................................................................................................................................................................................T-------CGCTTGTTTC-AGATTCTTCACCTTC..........................................................................................................................................................................................................26200.20404000
...............................................................................................................................................................................................................................................................................................GTTTC-AGATTCTTCACCTTCT------...................................................................................................................................................................................................21200.20404000
.............................................................................................................................................................................................................................................................................................TTGTTTC-AGATTCTTCACCTTCT------...................................................................................................................................................................................................23200.15303000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGGTC-------AAAAGTGTGCAACGCATAGAAG...................................................................................27200.15300030
.............................................................................................................................................................................................................................................................................................TTGTTTC-AGATTCTTCACCTTCT------TGC---------------------TC.........................................................................................................................................................................28200.10202000
..................................................................................................................................................................................................................................................................................................TC-AGATTCTTCACCTTCT------TGC---------------------TC.........................................................................................................................................................................23200.10202000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTGCAACGCATAGAAGG..................................................................................21200.10200200
..........................................................................................................................................................................................................................................................................................................................................................................................................GGTC-------AAAAGTGTGCAACGCAT........................................................................................21200.10202000
...............................................................................................................................................................................................................................................................................................GTTTC-AGATTCTTCACCTTCT------TG.................................................................................................................................................................................................23200.10202000
.................................................................................................................................................................................................................................................................................................TTC-AGATTCTTCACCTTCT------TGC---------------------...........................................................................................................................................................................22200.10202000
..........................................................................................................................................................................................................................................................................................CGCTTGTTTC-AGATTCTTCACCTT...........................................................................................................................................................................................................24200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGTC-------AAAAGTGTGCA..............................................................................................20200.05100100
..............................................................................................................................................................................................................................................................................................TGTTTC-AGATTCTTCACCTTCT------TGC---------------------T..........................................................................................................................................................................26200.05100010
.............................................................................................................................................................................................................................................................................................TTGTTTC-AGATTCTTCACCTTCT------C..................................................................................................................................................................................................24200.05101000
..................................................................................................................................................................................................................................................................................T-------CGCTTGTTTC-AGATTCTTCACC.............................................................................................................................................................................................................23200.05101000
.................................................................................................................................................................................................................................................................................CT-------CGCTTGTTTC-AGATTCTTCACC.............................................................................................................................................................................................................24200.05101000
...................................................................................................................................................................................................................................................................................................C-AGATTCTTCACCTTCT------TGC---------------------TC.........................................................................................................................................................................22200.05101000
.............................................................................................................................................................................................................................................................................................TTGTTTC-AGATTCTTCACCTTCT------TGC---------------------C..........................................................................................................................................................................27200.05101000
.................................................................................................................................................................................................................................................................................CT-------CGCTTGTTTC-AGATTCTTCACCTTCT------...................................................................................................................................................................................................28200.05101000
..................................................................................................................................................................................................................................................................................T-------CGCTTGTTTC-AGATTCTTCACCTT...........................................................................................................................................................................................................25200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTGCAACGCATAGAAGGAA................................................................................24200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AACGCATAGAAGGAAGCATC...........................................................................20200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTC-------AAAAGTGTGCAA.............................................................................................19200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................GGTC-------AAAAGTGTGCAACGCATAGAAG...................................................................................26200.05101000
..........................................................................................................................................................................................................................................................................................CGCTTGTTTC-AGATTCTTCACC.............................................................................................................................................................................................................22200.05101000
................................................................................................................................................................................................................................................................................CCT-------CGCTTGTTTC-AGATTCTTCACCTTCT------...................................................................................................................................................................................................29200.05101000
..........................................................................................................................................................................................................................................................................................CGCTTGTTTC-AGATTCTTCACCTTCT------TG.................................................................................................................................................................................................28200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCATAGAAGGAAGCATCTCCGACCA...................................................................25200.05100010
dp5
GCCAAAT--------G---ACATT--------GC-------------GG-----------GAGTTATAAGGTCAATGAGTTAAACTTG-------GCT----------------ACGCAGAG-------------------------------AAA----------GA-----------------GCAATTC-------------------------------CG--------------------------ATCATA-------------------ATAGG-------TCCTTCT------------GT------ATC---------------------TTGATATTTATACCCGATACTCAA----AATGAG-TATTGGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACATCCTGAAGGAATCGTTTCCGACACCATAAAGTA-------------TA--TATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTG................................................................................................232049.30986098500000001
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTGTA..............................................................................................25203.356706600100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCGA........26202.755500000005500
........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAATGGATGTGT.................................................................................................21202.304604600000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTGTAA.............................................................................................26202.254503100000770
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTGT...............................................................................................24201.853700000003700
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGCCG..............26201.553103100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTGTAACA...........................................................................................2881.0080700001000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAATGGATGTGTG................................................................................................21200.951901900000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGCCGA.............27200.901801800000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGGGTATATTAGATTTGTGG................................................................................................................21200.801600000000160
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACA....................................................................1950.6030300000000
.......................................................................................................................................................................................................................................................................................................................................................................TCAA----AATGAG-TATTGGGGTAT.............................................................................................................................21200.601201200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGC................24200.551100110000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGCCGAGTCGATT......22200.4590900000000
........................................................................................................................................................................................................................................................................................................................................................................................TTGGGGTATATTAGATTTGTG.................................................................................................................21200.4590900000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--TATATTCTTGATCAGCATC......................21200.4590000009000
.................................................................................................................................................................................................................................................................................................................................................................................TGAG-TATTGGGGTATATTAG........................................................................................................................20200.4080000000800
......................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAATGGATGT...................................................................................................21200.4080800000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAATGGATGTGTGTAACA...........................................................................................2690.3330300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCATCAATAGCCG..............25200.3060600000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACACC..................................................................2140.2510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGATGTGTGTAACATC.........................................................................................2190.2220200000000
................................................................................................................................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAA...........................................................................................................19200.2040400000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GAAAATGGATGTGTGTAACAT..........................................................................................21100.2020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCGAGT...........26200.1530000000300
........................................................................................................................................................................................................................................................................................................................................................................CAA----AATGAG-TATTGGGGTAT.............................................................................................................................20200.1530300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATCAATAGCCGAGTC..........21200.1530000030000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAAAATGGATGTGTGTA..............................................................................................21200.1530000003000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTA-------------TA--TATATTCTTGATCAGCA........................25200.1530000000300
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAATGGATGTGTGTAACAT..........................................................................................2780.1310100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGATGTGTGTAACATC.........................................................................................2090.1110010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATTGAGCC.22200.1020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAG.................23200.1020000200000
.........................................................................................................................................................................................................................................................................................................................................................TTTATACCCGATACTCAA----AATG...........................................................................................................................................22200.1020200000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAATGGATGTG..................................................................................................20200.1020010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCATCAATAGCCGAGT...........21200.1020000002000
.......................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGTATATTAGATTTGTGGT...............................................................................................................24200.1020000002000
....................................................................................................................................................................................................................................................................................................................................................................................................AGATTTGTGGTGAAAATGGAT.....................................................................................................21200.1020200000000
.........................................................................................................................................................................................................................................................................................................................................................................AA----AATGAG-TATTGGGGTATA............................................................................................................................20200.1020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAATGGATGTGTGTAACA...........................................................................................22110.0910100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GAAAATGGATGTGTGTAACA...........................................................................................20120.0810100000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAATGGA......................................................................................................22200.0510000000010
........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAATGGATGTGTG................................................................................................22200.0510000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGC................21200.0510000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCGAG............24200.0510000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATTGAGC..22200.0510000100000
....................................................................................................................................................................................................................................................................................................................................................................TACTCAA----AATGAG-TATTGGGGTATATT..........................................................................................................................27200.0510000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAATGGATGTG..................................................................................................19200.0510000001000
........................................................................................................................................................................................................................................................................................................................................................................................TTGGGGTATATTAGATTTGTGG................................................................................................................22200.0510000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAGC................25200.0510010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCC...............22200.0510010000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAATGGATGTGTG................................................................................................24200.0510000000100
.................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATTTGTGGTGAAAATGG.......................................................................................................22200.0510000000010
........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAATGGATGTGTC................................................................................................22200.0510000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAATGGATGTGTGTAA.............................................................................................24200.0510000000100
.................................................................................................................................................................................................................................................................................................................................................................................TGAG-TATTGGGGTATATTAGA.......................................................................................................................21200.0510000001000
...................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTGTGGTGAAAATGGATGTGT.................................................................................................26200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTG..................................................................................................21200.0510000010000
....................................................................................................................................................................................................................................................................................................................................................................................G-TATTGGGGTATATTAGATTTG...................................................................................................................22200.0510000001000
........................................................................................................................................................................................................................................................................................................................................................................CAA----AATGAG-TATTGGGGTATA............................................................................................................................21200.0510000001000
...............................................................................................................................................................................................................................................................................................................................................................................................ATATTAGATTTGTGGTGAAAA..........................................................................................................21200.0510100000000
droPer2
CTTCTATTGCGG---TATGTTGAA--------CA-------------ACCATGTAC---------------------------------------------------------------------------------ATACG-------GGCGATAATTAAAGCCGA-------------------------TCGG----------CTAGTAAT------TTTTCTT-TCAC-----------------------------------GTTTGCCT-------TCTTTGTATA-------------TTAT------TAT---------------------CATATTTTTATACCCGATACTCAA----AATGAG-TATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATCAAGTA-------------TA--TATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................TACTCAA----AATGAG-TATTGGGGT...............................................................................................................................22201.50300300000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGCCGA.............27200.153030000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAATAGCCGAGTCGATTGA....22200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGTGTGTAACGTC.........................................................................................18200.051000001
..........................................................................................................................................................................................................................................................................................................................................................................................................GTGGTAAAAGTGGATGTGTGT...............................................................................................21200.051001000
droAna3
CTTCACTTGCAT---ATTATTACC--------ATCGAATTC-----------------G------------GGTATAATTTTTGCGAA-------ATT----------------TTCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTTTT--------------------GGAC--------------------------------------TTCGTCTGCCCGAATTTTTATACCCTT-----GC-------------AGAGGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAATA-------------TA--TATATTTTTGATCAGGACCACCTCCTGAGTCGATATAAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................TCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTTT....................................................................................................................................................................................................................................................2790.565500000
...................................................................................................................TCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTT.....................................................................................................................................................................................................................................................26170.539711000
..........................................................................................................................................................................................................................................................................................................................................TCGTCTGCCCGAATTTTTATACCCTT-----GC-------------A.....................................................................................................................................2920.501100000
.........................................................................................................................................................................................................................................................................................................................................TTCGTCTGCCCGAATTTTTATACCCTT-----G....................................................................................................................................................2820.501100000
...............................................................................................................................................................................................................................................................................................................................................TGCCCGAATTTTTATACCCTT-----GC-------------AG....................................................................................................................................2520.501100000
..................................................................................TGCGAA-------ATT----------------TTCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CT................................................................................................................................................................................................................................................................................2920.501100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--TATATTTTTGATCAGGACCACC...................2430.331100000
.......TGCAT---ATTATTACC--------ATCGAATTC-----------------G------------GGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.292200000
...................................................................................................................TCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTT......................................................................................................................................................................................................................................................25170.183210000
...................................................................................................................................C--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTTTT--------------------GGAC--------------------------------------TTCGTCTGC............................................................................................................................................................................2560.171100000
........GCAT---ATTATTACC--------ATCGAATTC-----------------G------------GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.141100000
.TTCACTTGCAT---ATTATTACC--------ATCGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.141100000
......................................................................................................................ACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTTTT--------------------G..............................................................................................................................................................................................................................2680.131100000
....................TACC--------ATCGAATTC-----------------G------------GGTATAATTTTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2880.131100000
...................................................................................................................TCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTTTT--------------------G..............................................................................................................................................................................................................................2980.131100000
....................................................................................................................CCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTTTT--------------------G..............................................................................................................................................................................................................................2880.131100000
......................CC--------ATCGAATTC-----------------G------------GGTATAATTTTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2680.131100000
..................................................................................................................TTCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATC........................................................................................................................................................................................................................................................24180.112110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACCACCTCCTGAGTCGATATAAGC.2890.111000001
..................................................................................................................TTCCACAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTT.....................................................................................................................................................................................................................................................27170.061100000
.......................................................................................................................CAATCAGCTTTCC--------------------------------------------------------------------------------------------------------CTC--------------------ATCTTT.....................................................................................................................................................................................................................................................22180.061100000
......................................................................................................................................................................................................................................................................................................................................................ATTTTTATACCCTT-----GC-------------AGAGG.................................................................................................................................21200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACGCAGTGAAGGAGAC..............................................................................21200.051001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGACATCTCCGACCCTATA...............................................................24200.051100000
droBip1
TCTCATCAGT----------------------GTA------------------------------------------------------------------------A-TTTT--------------TCTG-----------------------TG----------TT-----------C------AAATCCTCGTAAGGACTTTGAACTTTTT------CTTTCTTT-TATAAA-----------------------------------------------------------------------TATTATCATTTTTTTTT------CTTTAA--TTGAAATATTTATACCCTT-----GC-------------AGAGGGTATTATAATTTTGTCC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTA-------------TA--TATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCASizeHit CountTotal NormTotal
No Reads
droKik1
ATTGG----------------------------------------------------------------------------------------------------GAA-TTTTT-------------TCAAAGTTGTT------TGCT---------------------------------------------------------------GT----------------CATATATTTT--------------------ATATTTTT--------------------ATAT--------------------------------------TTCTATTTTATATATTTTTATACCCTT-----GC---------------AGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTA-------------TA--TATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCASizeHit CountTotal NormTotal
No Reads
droFic1
CAAAAT---G----------------------A------------------------------------------------------------------------CAA-TCTTT----ATGG---------A----CTTACATTTGCT---------------------------------------------------------------TT---TTA---ATTTC-----------------------------T--ATATAAT--------------------AATA---------------TTAT------TAT---------------------TATATTATTATACCCTT-----GC----A--GAG-CA-AAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAATGTA-------------TATATATATTCTTGATCAGCATCACCATCTGAATCGAAATATGTASizeHit CountTotal NormTotal
No Reads
droEle1
GTTATAT-GCAG---TATGTTAGT--------GCAGTGTTT-----------------GT-----------GTTATATTTTCTGTGTA-------ACA----------------TTTCACAGTTTCT-----------------------------------------------------------------------GG----------TTAT------TTATTTG-TATA--------------------------------------------G---------AATT---------------TTAC------CAC---------------------GGTTTTGTTATACTCTT-----GC-------------AGAGGTTATTATAGTTTCATTC-------AGAAGTTTGCAACCCAGTGAGCGGGACATTTCCAACCCTATAAAGTA-------------TA--TATATTCTTGATCACCATCACTAGGAGAGTCGATCTAACCASizeHit CountTotal NormTotal
No Reads
droRho1
ACTTTATT--------AA----------------------------------GTCC-TGA-----------AAAATTACTTTTAAACA-------ACT----------------CTT----------------------------------------------------------------------------------------------------------CCCTT-ATTGTC-----------------------------------------------------------------------TTTATTCCTTTTTTTTTGCCAAATTCTACTGTTGACATAATTATACCCGTTACTCGT----G--GAG-TAAAAGGGTATATTGTATTCGTGC-------AAAAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCAATAAAGTA-------------TA--TATATTCTTGTTCAGGATCACTAGCCGAGTCGATCTAGCCASizeHit CountTotal NormTotal
No Reads
droBia1
GGTCGCC----GAATA---TGATT--------TC-------------TA-----------GACCTTCAGTGCCAA--------------------------------------------------------------------------------------------------TAAGCTG------AGA----------------GACAATCCT------TTTTGTCT-CCTGAT--------------------------------------------------TGGCAC--AAT-------------------TTT---------------------TTTATTTTTATACCCGTTACTCGC----A--GGG-CAAAAGGGTATACTAGATTTGCCC-------G-AAATGTGTAACAGGTGAGAGGAAGCCTT-TCGACCCCGTAAAGTA-------------TA--TATATTCTCGATCAGGATCACTAGCCGAGTCGATCTCGCCASizeHit CountTotal NormTotal
No Reads
droTak1
TTATT---------------------------ACAATACTTCTATAATTAACT---------------------------------------------------------------------------------GATTTCCA-------GTTGATATTTTTAGATGA-------------------------TCCTCAGG----------TTAT------CTGTTTT-TAGA--------------------------------------------A---------AATG----------TCACCTTAT------ACC---------------------TATATTTTTATACCCGTTACTCGT----A--GAG-TAAAAGGGTATACTAGATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTA-------------TA--TATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCASizeHit CountTotal NormTotal
No Reads
droEug1
GTAACG-----------------------------------------------------------------------G---------------------------CTG-TGTTTCTTGATAA-------------------------------TTA----------T-----------------------------------------------------TT--------------TTC--------------------ATCTTTCT--------------------TTACTCTCA-------------------CTT---------------------TTTATTTTTATACCCGTTACTCGT----A--GAG-TAAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGATAGAAGGAAGCTTTTGCGACCCTATAAAGTA-------------TA--TATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCASizeHit CountTotal NormTotal
No Reads
dm3
GCAATC-----------------------------------------------------------------------A-----------------------------------------------ATTCTAACTTATT------TTTTAACAGATA----------TT-----------T------AGATCTTACTAACG----------T---------------------------------------------TTAATATTTAT---------------------TAT--TCT-----TAT---TT------TAT---------------------ATTATATTTTTACCCGATACTTGT----A--GAG-TAATATGATATACTAGATTCATTG-------AAAACTATGTAGCAGGCAGAAGGAAGGGCTTCCGACCATATAAAGTA-------------TA--TATATTCTTGATCAGGATCAATGGCCGAGTCGATCTAGCCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................AACTATGTAGCAGGCAGA.....................................................................................18116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTG-------AAAACTATGTAGCAGGCAGAA....................................................................................24110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CATTG-------AAAACTATGTAGCAGGCAGA.....................................................................................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000010500000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TG-------AAAACTATGTAGCAGGCAGAA....................................................................................2319.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004300200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AACTATGTAGCAGGCAGAA....................................................................................1918.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TG-------AAAACTATGTAGCAGGCAGA.....................................................................................2218.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TCATTG-------AAAACTATGTAGCAGGCAGA.....................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTG-------AAAACTATGTAGCAGGCAGA.....................................................................................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATGGCCGAGTC..........2465.00300010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101070000400000000000000000000000000000000000000000000000000000008000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001100000000400000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CATTG-------AAAACTATGTAGCAGGCAGAA....................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TATT------TTTTAACAGATA----------TT-----------T------AGATCT..............................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TATTTTTACCCGATACTTGT----A--GAG-TA......................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGATCAATGGCC...............26104.00400000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000013100000000000000000000000000000000000000000030000000000000000100030105510000000000000000000000000000000000000000000000000000000000003000000001000000511000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TACCCGATACTTGT----A--GAG-T.......................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATGGCCGAGTCG.........2563.83230000000000000000000000000000000000000010000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001200100110000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000001802000000
...........................................................................................................................................................................................................................................................................................................................................................TTTACCCGATACTTGT----A--GAG-TAATA...................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GATA----------TT-----------T------AGATCTTACTAACG----------T---------------------------------------------T.............................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTCATTG-------AAAACTATGTAGCAGGCAGA.....................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATGGCCGAGTCGA........2663.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000003000000000000000000000000000000000000000001000000000000000000000010500220000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................G-------AAAACTATGTAGCAGGCAGAA....................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAGCAGGCAGAAGGAAGGGC............................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AACTATGTAGCAGGCAGAAGGAAGG..............................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TG-------AAAACTATGTAGCAGGCAGAAGG..................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TCATTG-------AAAACTATGTAGCAGGCAGAA....................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTACCCGATACTTGT----A--GAG-T.......................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AACTATGTAGCAGGCAGAAGGAAGGGC............................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TGT----A--GAG-TAATATGATATACTAGATT.....................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
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droSim2
GTGACTT--------------------------------------------------------------------------------------------TTTAGGCCGGTCT-G-----------------------------------------------------------------TAAACTT-TC-----------------------------CT--GTTCCC--------------------------------CCT--------------------TTTTTTCCTCCCT-------------------TAT---------------------CCTTATTATATACCCGTTACCCGT----A--GAG-TAAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAAGAAGCGTTTCCGGCTATTAAAAGTA-------------TA--TATATACTTGATTAAGATCAATAGCCGAGTTGATCTAGCCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAAGAAGCGTT...........................................................................2545.0020000000001019000000
......................................................................................................................................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGATTCGTTG-------AAA......................................................................................................27203.7074000000740000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGCTATTAAAAGTA-------------TA--TATATACT.................................2713.00300000003000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGCAGAAAGA.................................................................................2443.001200000003405000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAAGAAGCGT............................................................................2442.501000100000009000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGCAGAAAGAA................................................................................2542.501000000011025010000
............................................................................................................................................................................................................................................................................................................................................................................................................TG-------AAAAGTATGTAACAGGCAGAAAGA.................................................................................2632.33700000052000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGATTAAGATCAATAGCCGAGT...........2612.00200000002000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTG-------AAAAGTATGTAACAGGCAGA.....................................................................................27201.3026000000026000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTG-------AAAAGT...................................................................................................26201.3026000000000021050000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCTATTAAAAGTA-------------TA--TATATACTT................................2711.00100100000000000000
.....TT--------------------------------------------------------------------------------------------TTTAGGCCGGTCT-G-----------------------------------------------------------------TAAACTT-...................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAGTA-------------TA--TATATACTTGATTAAGA........................2811.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAAGAAGCGTTTCCGGCTAT..................................................................2611.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................T---------------------CCTTATTATATACCCGTTACCCGT----A--GA..........................................................................................................................................2811.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGCAGAAAGAAGC..............................................................................2731.00300010000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTG-------AA.......................................................................................................25200.8517000000017000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAAGAAGCGTTT..........................................................................2640.75300000000002100000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAAGAAGCGTT...........................................................................1970.57400000000004000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTG-------AAAAGTATGTAACAGGCAGAAAGA.................................................................................2820.50100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCGT----A--GAG-TAAAAGGGTATACTAGA.......................................................................................................................2520.50100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAAGAAGCG.............................................................................2340.50200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAAGAAGCGTTTC.........................................................................2740.50200000000002000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGCAGAAAG..................................................................................2340.50200000000001010000
...................................................................................................................................................................................................................................................................................................................................................................................AG-TAAAAGGGTATACTAGATTCGTTG-------AA.......................................................................................................28200.45900000009000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTG-------AAAAGTATGTAACAGGCAG......................................................................................26200.30600000000060000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAAGAAGCGTT...........................................................................2070.29200000000002000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAAGAAGCGT............................................................................1880.25200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAAGAAGCGTTTCC........................................................................2840.25100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTATGTAACAGGCAGAAAGAA................................................................................2440.25100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................G-TAAAAGGGTATACTAGATTCGT..................................................................................................................23200.25500000000005000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAAGAAGC..............................................................................2340.25100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAA...................................................................................17170.24400000000004000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATAGCCGAGTTGATCTA....2150.20100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAAGAAGCGTTT..........................................................................15160.19300000000003000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAAGAAGCGT............................................................................16110.18200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAAG..................................................................................1860.17100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTG-------AAAAGT...................................................................................................27200.15300000000000030000
......................................................................................................................................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGATTCGTTG-------AA.......................................................................................................26200.15300000000030000000
.........................................................................................................................................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTG-------AA.......................................................................................................23200.15300000030000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATTAAGATCAATAGCCGAGTTGAA.......2870.14100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAAGAAGCGTTTCC........................................................................2470.14100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATTAAGATCAATAGCCGAGT...........2470.14100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAAGAAGCGTT...........................................................................17100.10100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAAGAAGCGTTT..........................................................................18100.10100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................GTATACTAGATTCGTT.................................................................................................................16200.10200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTG-------AAAAGTA..................................................................................................27200.10200000000020000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGATTCGTTG-------AAAAG....................................................................................................15200.10200000000002000000
....................................................................................................................................................................................................................................................................................................................................................................................G-TAAAAGGGTATACTAGATTCGTTG-------AAA......................................................................................................28200.10200000002000000000
...................................................................................................................................................................................................................................................................................................................................................................................AG-TAAAAGGGTATACTAGATTCGTTG-------.........................................................................................................26200.10200000000000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAAGAAGCGTTTC.........................................................................18120.08100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAAGAAGCGT............................................................................15130.08100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................CCGT----A--GAG-TAAAAGGGTATACTCTT.......................................................................................................................25180.06100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGAAGCGTTTC.........................................................................15190.05100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTG-------AAAAGTAT.................................................................................................24200.05100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................CTAGATTCGTTG-------AAAAGTATGTAAC............................................................................................25200.05100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGATTCGTTG-------AAAAC....................................................................................................29200.05100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................G-TAAAAGGGTATACTAGATTCGTTG-------AA.......................................................................................................27200.05100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................TACTAGATTCGTTG-------AAAAGTATGT...............................................................................................24200.05100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................GGGTATACTAGATTCGTTG-------AAAAGTA..................................................................................................26200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................GGGTATACTAGATTCGTTG-------AAAAGT...................................................................................................25200.05100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTG-------A........................................................................................................24200.05100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTATACTAGATTCGTTG-------AAAA.....................................................................................................26200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTG-------AAAAGTATGTAACAGGC........................................................................................25200.05100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTG-------AAAAGTA..................................................................................................30200.05100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTG-------AAA......................................................................................................23200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTG-------AAAAGTA..................................................................................................28200.05100000010000000000
droSec2
CTTTGCA---------AA----------------------------------GTACATGG-----------AAAATAACATCATGGTACAACAAAATTTCTAAGGCAAGCTT-T--TA-------AT----A-----------------------------------------------CAATTTT-TA-----------------------------TT--AATTTT--------------------------------CTA--------------------TTCTATTTTTCAA-------------------CAA---------------------ATTAATTTTATACTCATTACGCGT----A--GAG-TAAAAGGGTATACTAGAATCGTTG-------AAAAAT---------GTAGAAGGAAGCATTTCCGACCATATACAGTATATATATACAGTATA--TATATTCTTGATCAGGATCAATAGCTAAGTCGATCTGGCC-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................ATCGTTG-------AAAAAT---------GTAGAAGGAAGC..............................................................................2511.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATA--TATATTCTTGATCAGGATC......................24200.701414000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATA--TATATTCTTGATCAGGAT.......................23200.3577000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATA--TATATTCTTGATCAGGATCA.....................25200.0510001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA--TATATTCTTGATCAGGATCA.....................24200.0511000
droYak3
CGGTTATC---CGATA---TTATTTCGCTAATTCGATACTTTTAT--TT-------------------------------------------------------------------------------------CAA----------------G-------------------CAAACGG---------------------------------------------------------------------GTACCTACCTACCCTCTCTCCTACCCCATCGGTCCTTTGCAT--AAT-----------TT------TTC---------------------ATGATTTTTATACCCGTTACTCGT----A--GAG-TAAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAGTGTTTCCGTCCATATAAAGTA-------------TA--TATATTCTTGATCAGGATCAATAGCCGAGTCAATTTGGCCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGT...........25200.6513000000000013
...............................................................................................................................................................................................................................................................................................................................................................................................ATACTAGATTCGTTG-------AAAAGT...................................................................................................21200.05100000100000
.........................................................................................................................................................................................................................................................................................................................................................TTTATACCCGTTACTCGT----A--GAG-T.......................................................................................................................................23200.05100100000000
droEre2
AATGTTT--------------------------------------------------------------------------------------------CTAGCGCAATTCT-C---TAAAA-------------------------------A------------------------------------------------------------------T------C----------TGCATTTAAATTTAGAAATTCATTTTTTT---------------------T--TAAAT-------------------TTT---------------------TTTGTAATTATACCCGTTACTCGA----A--GAG-TAAAAGGGTATACTAGATTTGTTT-------AAAAGTATGTAACATGCAGAAGGAAGCGTTTGCGACCTCATAAAGTA-------------TA--TATATTCTTGATCAGGATCAATAGCCGAGTCAAACTGGCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTTGTTT-------AAAT.....................................................................................................2740.2510001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTC..........24200.1020000002
.......................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTTGT..................................................................................................................21200.0510000100

Generated: 05/17/2015 at 10:46 PM