ID:

dmo_62

 Coordinate:

scaffold_6500:10610653-10610715 -

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.2 -32.9 -32.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TAATATTTTAGCAAATCACAATTAACAATAGCAAAAACATAACAAAATAATGCCAAGTATGCAGCACGTTGATGTTGTACGTGTTATCTCAACGGATTGCATACTTGGGAAATTTTGTGAATGTGTATTATGTTGCTGATGTGCATAAAAACTTATGTTAATA

***********************************.((((.(((((((....((((((((((((..((((((.((..........)).))))))..))))))))))))...)))))))..))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M046

female body

 M060

embryo

 V041

embryo

 V049

head

 V056

head
..................................................TGCCAAGTATGCAGCACGTTGA........................................................................................... 22 0 1 436.00 436 285 91 21 19 10 10
..................................................TGCCAAGTATGCAGCACGTTG............................................................................................ 21 0 1 342.00 342 254 73 2 2 6 5
..................................................TGCCAAGTATGCAGCACGTTGAT.......................................................................................... 23 0 1 29.00 29 25 2 1 0 0 1
..........................................................................................AACGGATTGCATACTTGGGAAA................................................... 22 0 1 25.00 25 14 2 7 2 0 0
..................................................TGCCAAGTATGCAGCACGTT............................................................................................. 20 0 1 20.00 20 18 1 0 0 0 1
..................................................TGCCAAGTATGCAGCACGTTGATC......................................................................................... 24 1 1 18.00 18 18 0 0 0 0 0
..........................................................................................AACGGATTGCATACTTGGGAA.................................................... 21 0 1 16.00 16 5 4 7 0 0 0
...................................................GCCAAGTATGCAGCACGTTGA........................................................................................... 21 0 1 15.00 15 6 9 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGAA.......................................................................................... 23 1 1 11.00 11 10 1 0 0 0 0
...................................................GCCAAGTATGCAGCACGTTGAT.......................................................................................... 22 0 1 8.00 8 6 0 2 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGAC.......................................................................................... 23 1 1 7.00 7 5 2 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGT........................................................................................... 22 1 1 7.00 7 5 1 1 0 0 0
..........................................................................................AACGGATTGCATACTTGGGA..................................................... 20 0 1 6.00 6 3 1 2 0 0 0
...................................................GCCAAGTATGCAGCACGTTG............................................................................................ 20 0 1 6.00 6 0 6 0 0 0 0
..........................................................................................AACGGATTGCATACTTGGGAAT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................ACGGATTGCATACTTGGGAAA................................................... 21 0 1 4.00 4 4 0 0 0 0 0
..................................................TGCCAAGTATGCATCACGTTG............................................................................................ 21 1 1 4.00 4 3 1 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGATT......................................................................................... 24 1 1 4.00 4 3 0 1 0 0 0
...........................................................................................ACGGATTGCATACTTGGGAT.................................................... 20 1 1 4.00 4 4 0 0 0 0 0
........................................................................................TCAACGGATTGCATACTTGGGA..................................................... 22 0 1 4.00 4 3 0 0 0 0 1
..........................................................................................AACGGATTGCATACTTGGGAAAA.................................................. 23 1 1 3.00 3 3 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGAAA......................................................................................... 24 2 1 3.00 3 2 0 0 0 0 1
...................................................GCCAAGTATGCAGCACGTTGATC......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.........................................................................................CAACGGATTGCATACTTGGGA..................................................... 21 0 1 2.00 2 2 0 0 0 0 0
..........................................................................................AACGGATTGCATACTTGGGAT.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................ACGGATTGCATACTTGGGAA.................................................... 20 0 1 2.00 2 1 1 0 0 0 0
.........................................................................................CAACGGATTGCATACTTGGGAT.................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGG........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGTT.......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..................................................TTCCAAGTATGCAGCACGTTGA........................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0
..................................................TGCCAAGTATGCAGCACTTTG............................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TGCCAGGTATGCAGCACGTTGA........................................................................................... 22 1 1 2.00 2 0 1 0 1 0 0
..................................................TGACAAGTATGCAGCACGTTGA........................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0
..................................................TTCCAAGTATGCAGCACGTTG............................................................................................ 21 1 1 2.00 2 1 0 1 0 0 0
..................................................TGCCAAGTATTCAGCACGTTGA........................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
..........................................................................................AACGGGTTGCATACTTGGGAAA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGGATGCTGCACGTTG............................................................................................ 21 2 1 1.00 1 0 0 0 0 1 0
..................................................TGCCACGTATGCAGCACGTT............................................................................................. 20 1 1 1.00 1 0 0 0 0 1 0
....................................................CCAAGTATGCAGCACGTTGATT......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...................................................GCCAAGTATGCAGCACGTTGATT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATACAGCACGATGA........................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0
.................................................GTGCCAAGTATGCAGCACGTTGA........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGAAAA........................................................................................ 25 3 1 1.00 1 0 0 1 0 0 0
........................................................................................TCAACGGATTGCATACCTGGGA..................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTACGCAGCACGTTG............................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0
..................................................TGCCAAGTATGCAGCACGTTT............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGT.............................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................ACGGATTGCATACTTGGGATA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................AACGGATTGCATACTTGGGAAAT.................................................. 23 0 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTCGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................CAAGTATGCAGCACGTTGA........................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGC........................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.................................................ATGCCAAGTATGCAGCACGTTGA........................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACTTTGA........................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TTCCAAGTATGCAGCACGTTGAT.......................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
..................................................TGCCAAGTATGCAGTACGTTG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGTTT......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
........................................................................................TCAACGGATTGCATACTTGGGCCT................................................... 24 3 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAATTATGCAGCACGTTG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................AACGGATTGCATACTTGGGTT.................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGTC.......................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
...................................................TCCAAGTATGCAGCACGTTG............................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACG............................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
..................................................TGCCAAGTATGTAGCACGTTG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGAAC......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCCGTACGTTGAA.......................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
..................................................TCCCAAGTATGCAGCACGTTG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTAA........................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGATAA........................................................................................ 25 2 1 1.00 1 0 1 0 0 0 0
..................................................TGCTAAGTATGCAGCACGTTGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................ACGGATTGCATACTTGGGAAAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.................................................CTGCCAAGTATGCAGCACGTTGA........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................ACGGATTGCATACTTGGGATG................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................CGCCAAGTATGCAGCACGTTG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAGGTATGCAGCACGTT............................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
.....................................................CAAGTATGCAGCACGTTG............................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGATAT........................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGTACGTGGA........................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TGCCAAGTATGCAGCACGTTTA........................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1
...................................................GCCAAGTATGCAGCACGTTGAC.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.................................................ATGCAAAGTATGCAGCACGTTG............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
....................................................CCAAGTATGCAGCACGTTGA........................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
........................................................................................TCAACGGATTGCATACTTGGG...................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGTAA......................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAACACGTTG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCCGCACGTTG............................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0
..................................................TGCCAAGTATGCACCACGTTGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................AACGGATTGCATACTTGGGAAAAA................................................. 24 2 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTGTGCAGCACGTT............................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................ACGGATTGCATACTTGGGAAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................ACGGATTGCATACTTGGGATC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGTAGCACGTTGA........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGATTTT....................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCTAAGTATGCAGAACGTTGA........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...................................................TCCAAGTATGCAGCACGTTGA........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTGG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGTTGATCT........................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CAACGGATTGCATACTTGGGAA.................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..................................................TGCCAAGCATGCAGCACGTTG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.................................................ATGCCAAGTATGCAGCACGTT............................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................AACGGATTGCATACTTGGTCC.................................................... 21 3 2 0.50 1 1 0 0 0 0 0
..................................................TGCCAAGTATGCAGCACGGTGGA.......................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0
.......................AACAATAGCAAAACAATAAC........................................................................................................................ 20 2 20 0.10 2 0 2 0 0 0 0
.......................AACAATAGCAAAACAATAACA....................................................................................................................... 21 2 20 0.10 2 0 2 0 0 0 0
...............................CAAACACATAAAAAAATAATCC.............................................................................................................. 22 3 16 0.06 1 0 0 1 0 0 0
..................................................................................................................TTGGGAATGTTTATTATGGT............................. 20 3 19 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

ATTATAAAATCGTTTAGTGTTAATTGTTATCGTTTTTGTATTGTTTTATTACGGTTCATACGTCGTGCAACTACAACATGCACAATAGAGTTGCCTAACGTATGAACCCTTTAAAACACTTACACATAATACAACGACTACACGTATTTTTGAATACAATTAT

************************************.((((.(((((((....((((((((((((..((((((.((..........)).))))))..))))))))))))...)))))))..))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 V110

male body		 V049

head

 M060

embryo

 V056

head

 V041

embryo
........................................................................................AGTTGCCTAACGTATGAACCCT..................................................... 22 0 1 55.00 55 34 9 4 4 3 1
.........................................................................................GTTGCCTAACGTATGAACCCT..................................................... 21 0 1 15.00 15 11 3 1 0 0 0
.......................................................................................GAGTTGCCTAACGTATGAACCC...................................................... 22 0 1 9.00 9 5 4 0 0 0 0
.........................................................................................GTTGCCTAACGTATGAACCCTT.................................................... 22 0 1 9.00 9 6 3 0 0 0 0
........................................................................................AGTTGCCTAACGTATGAACCC...................................................... 21 0 1 7.00 7 7 0 0 0 0 0
..........................................................................................TTGCCTAACGTATGAACCCTTT................................................... 22 0 1 5.00 5 4 1 0 0 0 0
.........................................................................................GTTGCCTAACGTATGAACCC...................................................... 20 0 1 2.00 2 0 2 0 0 0 0
.......................................................................................AAGTTGCCTAACGTATGAACCCT..................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.......................TTGTTATCGTTTTGTTATTGT....................................................................................................................... 21 2 20 1.10 22 20 2 0 0 0 0
................................................TTACGGTTCATACGTCGTGCAA............................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
........................................................................................TTTTGCCTAACGTATGAACCC...................................................... 21 2 1 1.00 1 0 0 0 0 1 0
........................................................................................AGTTGCCTAACGTATGGACCCT..................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..............................................TATTACGGTTCATACGTCGTGC............................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
........................................................................................AGTTGCCTAACGTATGAACCCTTT................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................GTTGCCTAAGGTATGAACCCT..................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................GTTGCCTAACGTATGAACCCTTT................................................... 23 0 1 1.00 1 1 0 0 0 0 0
........................................................................................AGTTGCCTAACGTATGAACCCTT.................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..............................................AATTACGGTTCATACGTCGTGCAA............................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0
.......................TTGTTATCGTTTTGTTATTGTT...................................................................................................................... 22 2 20 0.90 18 5 12 1 0 0 0
.......................TTGTTATCGTTTTGTTATTG........................................................................................................................ 20 2 20 0.70 14 14 0 0 0 0 0
................................TTTTTCTATAGTTTTACTACGGT............................................................................................................ 23 3 3 0.33 1 0 0 1 0 0 0
.................................................................................ACAATAAAGTTGCCGAACGTG............................................................. 21 3 4 0.25 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6500:10610603-10610765 - dmo_62 confident TAATATTTTAGCAAATCACAATTAACAATAGCAAAAACATAACAAAAT-A-----ATGCCAAGTATGCAGCACGTTGATGTTGTACGTGTTATCTCAACGGATTGCATACTTGGGAAATTTTGTGAATGTGTATTATGTTGCTGATGTGCATAAAAACTTATGTTAATA-------
droVir3 scaffold_12723:4640718-4640849 - dvi_207 confident -AAA-------------------------------------ACAAAAT-ATAAATTTGCCAAGTATGCAGCACGTTGATGTTTTTCTCGTTGTCACAACGCATTGCATACATGACAAATTTTGCTAATTTGTAT---TCTGCTTGTAAACATAA--AGTAATTATAATAGCACTTA
droGri2 scaffold_15203:4252192-4252254 + -AATATTGCATCAGATTATAATTAAATACAGCAAGAATATAACAACAGAA-----AAGCCAAACAAACA-----------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TAATATTTTAGCAAATCACAATTAACAATAGCAAAAACATAACAAAAT-A-----ATGCCAAGTATGCAGCACGTTGATGTTGTACGTGTTATCTCAACGGATTGCATACTTGGGAAATTTTGTGAATGTGTATTATGTTGCTGATGTGCATAAAAACTTATGTTAATA-------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................................................TGCCAAGTATGCAGCACGTTGA..................................................................................................221436.004369119101021285
........................................................TGCCAAGTATGCAGCACGTTG...................................................................................................211342.00342732652254
........................................................TGCCAAGTATGCAGCACGTTGAT.................................................................................................23129.00292001125
................................................................................................AACGGATTGCATACTTGGGAAA..........................................................22125.00252200714
........................................................TGCCAAGTATGCAGCACGTT....................................................................................................20120.00201001018
........................................................TGCCAAGTATGCAGCACGTTGATC................................................................................................24118.00180000018
................................................................................................AACGGATTGCATACTTGGGAA...........................................................21116.0016400075
.........................................................GCCAAGTATGCAGCACGTTGA..................................................................................................21115.0015900006
........................................................TGCCAAGTATGCAGCACGTTGAA.................................................................................................23111.00111000010
.........................................................GCCAAGTATGCAGCACGTTGAT.................................................................................................2218.008000026
........................................................TGCCAAGTATGCAGCACGTTGAC.................................................................................................2317.007200005
........................................................TGCCAAGTATGCAGCACGTTGT..................................................................................................2217.007100015
................................................................................................AACGGATTGCATACTTGGGA............................................................2016.006100023
.........................................................GCCAAGTATGCAGCACGTTG...................................................................................................2016.006600000
................................................................................................AACGGATTGCATACTTGGGAAT..........................................................2215.005000005
.................................................................................................ACGGATTGCATACTTGGGAAA..........................................................2114.004000004
........................................................TGCCAAGTATGCAGCACGTTGATT................................................................................................2414.004000013
.................................................................................................ACGGATTGCATACTTGGGAT...........................................................2014.004000004
..............................................................................................TCAACGGATTGCATACTTGGGA............................................................2214.004000103
................................................................................................AACGGATTGCATACTTGGGAAAA.........................................................2313.003000003
........................................................TGCCAAGTATGCAGCACGTTGAAA................................................................................................2413.003000102
.........................................................GCCAAGTATGCAGCACGTTGATC................................................................................................2312.002000002
...............................................................................................CAACGGATTGCATACTTGGGA............................................................2112.002000002
................................................................................................AACGGATTGCATACTTGGGAT...........................................................2112.002000002
.................................................................................................ACGGATTGCATACTTGGGAA...........................................................2012.002100001
...............................................................................................CAACGGATTGCATACTTGGGAT...........................................................2212.002000002
........................................................TGCCAAGTATGCAGCACGTTGG..................................................................................................2212.002000002
..........................................................CCAAGTATGCAGCACGTTGATT................................................................................................2211.001000001
.........................................................GCCAAGTATGCAGCACGTTGATT................................................................................................2311.001000001
........................................................TGCCAAGTATGCAGCACGTTGAAAA...............................................................................................2511.001000010
........................................................TGCCAAGTATGCAGCACGTTT...................................................................................................2111.001000001
........................................................TGCCAAGTATGCAGCACGT.....................................................................................................1911.001100000
................................................................................................AACGGATTGCATACTTGGGAAAT.........................................................2311.001000001
...........................................................CAAGTATGCAGCACGTTGA..................................................................................................1911.001000001
........................................................TGCCAAGTATGCAGCACGTTGC..................................................................................................2211.001100000
.......................................................ATGCCAAGTATGCAGCACGTTGA..................................................................................................2311.001000001
..............................................................................................TCAACGGATTGCATACTTGGGCCT..........................................................2411.001000001
................................................................................................AACGGATTGCATACTTGGGTT...........................................................2111.001000001
........................................................TGCCAAGTATGCAGCACGTTGTC.................................................................................................2311.001100000
........................................................TGCCAAGTATGCAGCACG......................................................................................................1811.001100000
........................................................TGCCAAGTATGCAGCACGTTGAAC................................................................................................2411.001000001
........................................................TGCCAAGTATGCAGCACGTTGATAA...............................................................................................2511.001100000
.................................................................................................ACGGATTGCATACTTGGGAAAA.........................................................2211.001000001
.................................................................................................ACGGATTGCATACTTGGGATG..........................................................2111.001000001
...........................................................CAAGTATGCAGCACGTTG...................................................................................................1811.001100000
.........................................................GCCAAGTATGCAGCACGTTGAC.................................................................................................2211.001100000
..........................................................CCAAGTATGCAGCACGTTGA..................................................................................................2011.001100000
..............................................................................................TCAACGGATTGCATACTTGGG.............................................................2111.001000001
........................................................TGCCAAGTATGCAGCACGTTGTAA................................................................................................2411.001000001
................................................................................................AACGGATTGCATACTTGGGAAAAA........................................................2411.001000001
.................................................................................................ACGGATTGCATACTTGGGAAT..........................................................2111.001000001
.................................................................................................ACGGATTGCATACTTGGGATC..........................................................2111.001000001
...............................................................................................CAACGGATTGCATACTTGGGAA...........................................................2211.001000001
.......................................................ATGCCAAGTATGCAGCACGTT....................................................................................................2111.001000001
................................................................................................AACGGATTGCATACTTGGTCC...........................................................2120.501000001
droVir3
-AAA-------------------------------------ACAAAAT-ATAAATTTGCCAAGTATGCAGCACGTTGATGTTTTTCTCGTTGTCACAACGCATTGCATACATGACAAATTTTGCTAATTTGTAT---TCTGCTTGTAAACATAA--AGTAATTATAATAGCACTTASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................TGCCAAGTATGCAGCACGTTGA..................................................................................................2224889.5097790014032313754117000010001074800420522130207680924170527100125320000000000000000000007001200000000100000
........................................................TGCCAAGTATGCAGCACGTTG...................................................................................................2123067.0061340060323751020142000010002075600110011410104443413200243200003900000000000000000000103200000000000000100
..........................................................CCAAGTATGCAGCACGTTGATG................................................................................................221195.0019500110102030000000000000000004332318001000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTT....................................................................................................202100.0020000000802000000000000250000000403919380100000018000000000000000000000100000000000000000
........................................................TGCCAAGTATGCAGCACGTTGAT.................................................................................................23165.0065000001010000000000000000000021672401000004000000000000000000000000000000000000000
................................................................................................AACGCATTGCATACATGACAAA..........................................................22240.0080000000010000000000001000000038264900000001000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGAC.................................................................................................23236.50730000030000000000000070000000191210905000004000000000000000000000400000000000000000
........................................................TGCCAAGTATGCAGCACGT.....................................................................................................19236.00720000020300000000000050000000191831307000001000000000000000000000100000000000000000
................................................................................................AACGCATTGCATACATGACAA...........................................................21232.50650000000000000000000000000000282041100000000000000000000000000000200000000000000000
........................................................TGCCAAGTATGCAGCACGTTGATC................................................................................................24127.002700000200000000000000000000001155300000001000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGATGT...............................................................................................23126.002600000000030000000000000000004231301000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGACC................................................................................................24222.00449000020000000000000080000000782003000002000000000000000000000300000000000000000
........................................................TGCCAAGTATGCAGCACGTTGC..................................................................................................22218.5037000005100000000000001800000000000010000003000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGT..................................................................................................22215.50310000010101000000000020000000694501000001000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGA..................................................................................................20212.50250010000100000000000000000000744303000001000000000000000000010000000000000000000
..........................................................CCAAGTATGCAGCACGTTGAT.................................................................................................21112.00120000000000000000000000000000122600000001000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACG......................................................................................................18211.50230000010300000000000050000000133303000001000000000000000000000000000000000000000
................................................................................................AACGCATTGCATACATGACA............................................................20211.002200000000000000000000200000001050401000000000000000000000000000000000000000000000
............................................................AAGTATGCAGCACGTTGA..................................................................................................18211.00220000010115000000000050000000300203000001000000000000000000000000000000000000000
................................................................................................AACGCATTGCATACATGACAAAA.........................................................23210.502100000000000000000000000000001162200000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTT...................................................................................................2129.00180000000000000000000070000000261200000000000000000000000000000000000000000000000
.........................................................GCCAAGTATGCAGCACGTTGA..................................................................................................2128.50170010010000000000000010000000333102000002000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGATG................................................................................................2418.0080000000100000000000000000000020500000000000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTG...................................................................................................1926.50130000000001000000000030000000350100000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTA...................................................................................................2126.00120000000000000000000040000000041200000001000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGAG.................................................................................................2326.00120000000001000000000030000000130300001000000000000000000000000000000000000000000
...........................................................CAAGTATGCAGCACGTTGA..................................................................................................1926.00120000030000000000000010000000100103000003000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTC...................................................................................................2125.50110000000000000000000040000000210200000002000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGATGTG..............................................................................................2415.0050000000100000000000000000000220000000000000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGATGTC..............................................................................................2415.0050000000001000000000000000000200200000000000000000000000000000000000000000000000
...........................................................CAAGTATGCAGCACGTTG...................................................................................................1825.00100000000100000000000040000000100102000001000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGATC................................................................................................2214.0040000000000000000000000000000010300000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGG..................................................................................................2224.0080000000000000000000030000000200300000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGTC.................................................................................................2323.5070000010000000000000010000000110200000001000000000000000000000000000000000000000
.........................................................GCCAAGTATGCAGCACGTTG...................................................................................................2023.5070000000001000000000030000000110100000000000000000000000000000000000000000000000
...........................................................CAAGTATGCAGCACGTTGATG................................................................................................2113.0030000000001000000000000000000010100000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTC....................................................................................................2023.0060000010000000000000000000000300000000002000000000000000000000000000000000000000
.........................................................GCCAAGTATGCAGCACGTTGATG................................................................................................2312.0020000000000000000000000000000010100000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGATT................................................................................................2412.0020000000000000000000010000000100000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTCC..................................................................................................2221.5030000000000000000000030000000000000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGACT................................................................................................2421.5031000000000000000000000000000010000000001000000000000000000000000000000000000000
...........................................................CAAGTATGCAGCACGTTGAT.................................................................................................2011.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
...............................................................TATGCAGCACGTTGATGT...............................................................................................1811.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGATGT...............................................................................................2511.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................CAAGTATGCAGCACGTTGATC................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................AACGCATTGCATACATGACAAAAA........................................................2421.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
................................................................................................AACGCATTGCATACATGACC............................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000002000000
.........................................................GCCAAGTATGCAGCACGTTGATA................................................................................................2311.0010000000001000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGATTA...............................................................................................2511.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGATCC...............................................................................................2511.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................GCCAAGTATGCAGCACGTTGATC................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................CAACGCATTGCATACATGACA............................................................2121.0020000000000000000000000000000200000000000000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGATGTCC.............................................................................................2511.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................ACAACGCATTGCATACATGACA............................................................2220.5010000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGAC.................................................................................................2120.5010000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................CAAGTATGCAGCACGTTGAC.................................................................................................2020.5010000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTGTCA................................................................................................2420.5010000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGACC................................................................................................2220.5010000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTCT..................................................................................................2220.5010000000000000000000010000000000000000000000000000000000000000000000000000000000
..................................................................................................CGCATTGCATACATGACAAA..........................................................2020.5010000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................CCAAGTATGCAGCACGTTGTCC................................................................................................2220.5010000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................................CAACGCATTGCATACATGACAA...........................................................2220.5010000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTAC..................................................................................................2220.5010000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGA.....................................................................................................1920.5010000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTAT..................................................................................................2220.5010000000000000000000010000000000000000000000000000000000000000000000000000000000
...............................................................................................CAACGCATTGCATACATGACAAA..........................................................2320.5010000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................TGCCAAGTATGCAGCACGTTTT..................................................................................................2230.3310000000000000000000010000000000000000000000000000000000000000000000000000000000
droGri2
-AATATTGCATCAGATTATAATTAAATACAGCAAGAATATAACAACAGAA-----AAGCCAAACAAACA-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads

Generated: 10/20/2015 at 07:37 PM