ID:

dmo_547

 Coordinate:

scaffold_6359:1153616-1153766 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.2 -28.0 -28.0

Flybase annnotation

CDS [Dmoj\GI21584-cds]; exon [dmoj_GLEANR_6582:1]; intron [Dmoj\GI21584-in]

No Repeatable elements found

mature
  1. scaffold_871:1407-1430 +
  2. scaffold_4743:3329-3352 +
  3. scaffold_6214:1302-1325 +
  4. scaffold_6308:941174-941197 +
  5. scaffold_6328:2555185-2555208 +
  6. scaffold_6473:4785252-4785275 +
  7. scaffold_6473:14532612-14532635 +
  8. scaffold_6482:2424297-2424320 +
  9. scaffold_6496:3576870-3576893 +
  10. scaffold_6496:10044784-10044807 +
  11. scaffold_6500:10670323-10670346 +
  12. scaffold_6500:31976874-31976897 +
  13. scaffold_6500:32129744-32129767 +
  14. scaffold_6500:32147724-32147747 +
  15. scaffold_6540:1418956-1418979 +
  16. scaffold_6540:5168158-5168181 +
  17. scaffold_6540:25972407-25972430 +
  18. scaffold_6541:1896935-1896958 +
  19. scaffold_6680:15727350-15727373 +
  20. scaffold_6680:23443697-23443720 +
  21. scaffold_635:1140-1163 +
  22. scaffold_4743:11895-11918 +
  23. scaffold_6473:12277789-12277812 +
  24. scaffold_6482:2013532-2013555 +
  25. scaffold_6496:22354991-22355014 +
  26. scaffold_6496:23420610-23420633 +
  27. scaffold_6500:11007168-11007191 +
  28. scaffold_6500:21058936-21058959 +
  29. scaffold_6500:22439148-22439171 +
  30. scaffold_6540:13397663-13397686 +
  31. scaffold_6540:14484243-14484266 +
  32. scaffold_6540:18825135-18825158 +
  33. scaffold_6541:879670-879693 +
  34. scaffold_6654:223763-223786 +
  35. scaffold_6680:4527189-4527212 +
  36. scaffold_4101:2128-2151 -
  37. dmo_547  scaffold_6359:1153671-1153694 -
  38. scaffold_6473:2106037-2106060 -
  39. scaffold_6473:4318811-4318834 -
  40. scaffold_6473:7055094-7055117 -
  41. scaffold_6473:11123063-11123086 -
  42. scaffold_6473:12100676-12100699 -
  43. scaffold_6482:396231-396254 -
  44. scaffold_6482:842706-842729 -
  45. scaffold_6496:4400280-4400303 -
  46. scaffold_6496:5077318-5077341 -
  47. scaffold_6496:25504067-25504090 -
  48. scaffold_6500:3087653-3087676 -
  49. scaffold_6500:20554918-20554941 -
  50. scaffold_6500:28190485-28190508 -
  51. scaffold_6500:28287439-28287462 -
  52. scaffold_6501:172373-172396 -
  53. scaffold_6540:6551998-6552021 -
  54. scaffold_6540:15727993-15728016 -
  55. scaffold_6680:23729765-23729788 -
star

Sense Strand Reads

-------------------###############################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCCTATGCGTTCATGCGCGATGTCAAAAATTGAAGCTTGCAAGTGCTGTAGTAAGATATTGATACCTACACAAATGCCACACCACCCCCCCGCCGCAGCGGCTTGGAAACCGTTCCAAATAATGTTCTTCTATGAGTAGGTCATGGATATAATAATTATATCCATCAGTTCCTTCCAAATTCAATTTTTCTCATCAGAAAAGACAACATGCTGCCATTGGGTAGACCACGTCATATTCGCCCGGCCAAAAT
**************************************************..(((..(((((.((((((.((.................((((....)))).((((((....))))))..............)).))))))..(((((((((...))))))))))))))..)))...........((((((....))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
................................................................................................................................................................................................................................ACCACGTCATATTCGCCCGG....... 20 0 20 0.15 3 3 0
..................................................................................................................................................................................................................................CACGTCATATTCGCCCGG....... 18 0 20 0.05 1 1 0
................................................................................................................................................................................................................................ACCACGTCATATTCGCCCGGC...... 21 0 20 0.05 1 0 1
.................................................................................................................................................................................................TCAGAAAAGACAACATGCTGC..................................... 21 0 20 0.05 1 0 1
...............................................................................................................................................................................................................ATGCTGCCATTGGGTAGACCACGTC................... 25 0 20 0.05 1 1 0
..........................................................................................................................TTTTCTTCTATGAGTAGGTCATGG......................................................................................................... 24 1 20 0.05 1 0 1
..........................................................................................................................TGTTCTTCTATGAGTAGGTCATGG......................................................................................................... 24 0 20 0.05 1 0 1
..............................................................................................................................................................................................TCATCAGAAAAGACAACATGCTGC..................................... 24 0 20 0.05 1 0 1
............................................................................................................................TTCTTCTATGAGTAGGTCATGGATAT..................................................................................................... 26 0 20 0.05 1 1 0
..........................................................................................................................................................................................................ACAACATGCTGCCATTGGGTAGA.......................... 23 0 20 0.05 1 1 0
...................................................................................................................................................................................................AGAAAAGACAACATGCTGCCATTGGG.............................. 26 0 20 0.05 1 1 0
................................................TAGTAAGATATTGATACCTACACA................................................................................................................................................................................... 24 0 20 0.05 1 0 1

Anti-sense strand reads

AGGATACGCAAGTACGCGCTACAGTTTTTAACTTCGAACGTTCACGACATCATTCTATAACTATGGATGTGTTTACGGTGTGGTGGGGGGGCGGCGTCGCCGAACCTTTGGCAAGGTTTATTACAAGAAGATACTCATCCAGTACCTATATTATTAATATAGGTAGTCAAGGAAGGTTTAAGTTAAAAAGAGTAGTCTTTTCTGTTGTACGACGGTAACCCATCTGGTGCAGTATAAGCGGGCCGGTTTTA
**************************************************..(((..(((((.((((((.((.................((((....)))).((((((....))))))..............)).))))))..(((((((((...))))))))))))))..)))...........((((((....))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V041
embryo
 V056
head
 V049
head
...........................................................................................................TTGGCAAGGTTTATTACAAGAAGAT....................................................................................................................... 25 0 20 14.30 286 0 201 69 16 0 0
..................................CGAACGTTCACGACATCATTCTAT................................................................................................................................................................................................. 24 0 20 6.95 139 63 0 75 1 0 0
..............................................................................................................................................................................................................GTACGACGGTAACCCATCTGGTGCAGTA................. 28 0 20 2.65 53 50 3 0 0 0 0
.................................................................................................................................................................................................................CGACGGTAACCCATCTGGTGCAGTA................. 25 0 20 2.60 52 35 0 16 1 0 0
.........................................................................................................................................................TTAATATAGGTAGTCAAGGAAGGTT......................................................................... 25 0 20 1.75 35 15 19 1 0 0 0
....TACGCAAGTACGCGCTACAGTTTTT.............................................................................................................................................................................................................................. 25 0 20 1.60 32 31 0 1 0 0 0
AGGATACGCAAGTACGCGCTACAGTT................................................................................................................................................................................................................................. 26 0 20 1.35 27 25 2 0 0 0 0
.................................TCGAACGTTCACGACATCATTCTAT................................................................................................................................................................................................. 25 0 20 1.25 25 25 0 0 0 0 0
................................TTCGAACGTTCACGACATCATTCTAT................................................................................................................................................................................................. 26 0 20 1.25 25 19 0 6 0 0 0
.......................................................................................................................................................TATTAATATAGGTAGTCAAGGAAGGTT......................................................................... 27 0 20 1.10 22 0 21 1 0 0 0
........................................................................................................................................................ATTAATATAGGTAGTCAAGGAAGGTT......................................................................... 26 0 20 1.00 20 20 0 0 0 0 0
........................................................................................................................................................................AAGGAAGGTTAAAATTAAAA............................................................... 20 2 20 0.95 19 0 19 0 0 0 0
...........................................................................................................TTGGCAAGGTTTATTACAAGAAGA........................................................................................................................ 24 0 20 0.90 18 18 0 0 0 0 0
...............................CTTCGAACGTTCACGACATCATTCTAT................................................................................................................................................................................................. 27 0 20 0.70 14 12 0 2 0 0 0
..........................................................................................................................................................TAATATAGGTAGTCAAGGAAGGTT......................................................................... 24 0 20 0.70 14 13 0 0 1 0 0
............................................................................................................TGGCAAGGTTTATTACAAGAAGAT....................................................................................................................... 24 0 20 0.60 12 0 0 11 1 0 0
...............................................................................................................................................................................................................TACGACGGTAACCCATCTGGTGCAGTA................. 27 0 20 0.60 12 11 0 1 0 0 0
..............................................................................................................................................................................................................GTACGACGGTAACCCATCTGGTGCAGT.................. 27 0 20 0.50 10 10 0 0 0 0 0
.............................................................................................................GGCAAGGTTTATTACAAGAAGAT....................................................................................................................... 23 0 20 0.40 8 8 0 0 0 0 0
..........................................................................................................................................................TAATATAGGTAGTCAAGGAAGGTTT........................................................................ 25 0 20 0.30 6 3 3 0 0 0 0
...................................................................................................................................................................................................................ACGGTAACCCATCTGGTGCAGTA................. 23 0 20 0.30 6 6 0 0 0 0 0
..............................ACTTCGAACGTTCACGACATCATTCTAT................................................................................................................................................................................................. 28 0 20 0.30 6 6 0 0 0 0 0
..................................CGAACGTTCACGACATCATTTTAT................................................................................................................................................................................................. 24 1 20 0.30 6 0 0 6 0 0 0
.........................................................................................................................................................TTAATATAGGTAGTCAAGGAAGGTTT........................................................................ 26 0 20 0.30 6 3 3 0 0 0 0
....................................................................................................................................................................................................................CGGTAACCCATCTGGTGCAGTA................. 22 0 20 0.25 5 4 0 0 1 0 0
..................................CGAACGTTCACGACATCATTCTATAAC.............................................................................................................................................................................................. 27 0 20 0.25 5 3 0 2 0 0 0
.GGATACGCAAGTACGCGCTACAGT.................................................................................................................................................................................................................................. 24 0 20 0.25 5 5 0 0 0 0 0
..GATACGCAAGTACGCGCTACAGTTTTT.............................................................................................................................................................................................................................. 27 0 20 0.25 5 5 0 0 0 0 0
.......................................................................................................................................................TATTAATATAGGTAGTCAAGGAAGGTTT........................................................................ 28 0 20 0.25 5 3 2 0 0 0 0
............................................................................................................TGGCAAGGTTTATTACAAGAAGA........................................................................................................................ 23 0 20 0.20 4 4 0 0 0 0 0
.............................................................................GTGTGGTGGGGGGGCGGCGT.......................................................................................................................................................... 20 0 20 0.20 4 2 1 0 1 0 0
..................................CGAACGTTCACGACATCATTCTATA................................................................................................................................................................................................ 25 0 20 0.20 4 1 0 3 0 0 0
.GGATACGCAAGTACGCGCTACAGTT................................................................................................................................................................................................................................. 25 0 20 0.15 3 0 3 0 0 0 0
.................................................................................................................................................................................................................CGACGGTAACCCATCTGGTGCACTA................. 25 1 20 0.15 3 0 0 3 0 0 0
.................................................................................................................................................................................................................CGACGGTAACCCATCTGGTGCAGTAT................ 26 0 20 0.15 3 3 0 0 0 0 0
..................................CGAACGTTCACGACATCATTCT................................................................................................................................................................................................... 22 0 20 0.15 3 0 0 3 0 0 0
...................................GAACGTTCACGACATCATTCTAT................................................................................................................................................................................................. 23 0 20 0.15 3 2 0 1 0 0 0
.............................AACTTCGAACGTTCACGACATCATTCTAT................................................................................................................................................................................................. 29 0 20 0.15 3 3 0 0 0 0 0
...ATACGCAAGTACGCGCTACAGTT................................................................................................................................................................................................................................. 23 0 20 0.15 3 3 0 0 0 0 0
........................................................................................................................................................ATTAATATAGGTAGTCAAGGAAGGTTT........................................................................ 27 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................TTGGCAATGTTTATTACAAGAAGAT....................................................................................................................... 25 1 20 0.10 2 2 0 0 0 0 0
..................................CGAACGTTCACGACATCATTCTATAACT............................................................................................................................................................................................. 28 0 20 0.10 2 0 0 2 0 0 0
.......................................................................................................................................................TATTAATATAGGTAGTCAAGGAAGGT.......................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
............................................................................................................................AAGAAGATACTCATCCAGTACCTA....................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
.......GCAAGTACGCGCTACAGTTTTT.............................................................................................................................................................................................................................. 22 0 20 0.10 2 2 0 0 0 0 0
............................................................................................GGCGTCGCCGAACCTTTGGCAAGGTT..................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
................................TTCGAACGTTCACGACATCATTC.................................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................AGGTAGTCAAGGAAGGTTTAAGTT................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................TAGGTGGGCAAGGATGGTT......................................................................... 19 3 20 0.10 2 0 2 0 0 0 0
..........................................................................................................TTTGGCAAGGTTTATTACAAGAAGAT....................................................................................................................... 26 0 20 0.10 2 0 1 1 0 0 0
....................................................................................................................................................................................................CTTTTCTGTTGTACGACGGTAACCCAT............................ 27 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................................................................ACGACGGTAACCCATCTGGTGCAGTAT................ 27 0 20 0.10 2 2 0 0 0 0 0
.................................TCGAACGTTCACGACATCATTCTA.................................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................TTGGCAAGGTTTATTACAAGAAGTT....................................................................................................................... 25 1 20 0.10 2 0 0 2 0 0 0
..................................CGAACGTTCACGACATCAT...................................................................................................................................................................................................... 19 0 20 0.10 2 0 0 2 0 0 0
..GATACGCAAGTACGCGCTACAGTTTT............................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................TAGGTTGGCAAGGATGGTT......................................................................... 19 3 20 0.10 2 0 2 0 0 0 0
.................................CCGAACGTTCACGACATCATTCTAT................................................................................................................................................................................................. 25 1 20 0.10 2 0 0 2 0 0 0
...........................................................................................................TTGGCAAGGTTTATTACAATAAGAT....................................................................................................................... 25 1 20 0.10 2 0 1 1 0 0 0
............................................................................................................................................................ATATAGGTAGTCAAGGAAGGTTT........................................................................ 23 0 20 0.10 2 2 0 0 0 0 0
.................................TCGAACGTTCACGACATCATTC.................................................................................................................................................................................................... 22 0 20 0.10 2 1 0 1 0 0 0
............................................................................................................TGGCAAGGTTTATTACAGGAAGA........................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
..................................CGAACGTTCACGACATCATT..................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................ATAGGTAGTCAAGGAAGGTT......................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................CGACGGTAACCCATCTGGTGCAGT.................. 24 0 20 0.05 1 0 0 1 0 0 0
.................................TCGAACGTTCACGACATCAGT..................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................................................................................GTTGTACGACGGTAACCCATCTGGT....................... 25 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................TAGGTAGTCAAGGAAGGTTTAAGTTA.................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................TAGGTAGTCAAGGAAGGTT......................................................................... 19 0 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................................................................TACAACGGTAACCCATCTGGTGCACTA................. 27 2 20 0.05 1 0 0 1 0 0 0
.......................................................CCCAACTATGGATGTGTTTACGGT............................................................................................................................................................................ 24 3 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................TAGGTAGTCAAGGAAGGTTTAAGT.................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................CAAGGTTTATTACAAGAAGAT....................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TTGGCAAGGTTTCTTACAAGAACAT....................................................................................................................... 25 2 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................TTAATATAGGTAGTCATGGAAGGTT......................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................CTCATCCAGTACCTATATTAT................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
.................................TCGAACGTTCACGACATCATTCT................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................................TCTGTTGTACGACGGTAACCCAT............................ 23 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................CGACGGTACCCCATCTGGTGCAGTA................. 25 1 20 0.05 1 0 0 0 1 0 0
.....................................ACGTTCACGACATCATTCTATAACT............................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................AGGTAGTCAAGGAAGGTT......................................................................... 18 0 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................TAGGTAGTCAAGGAAGGTTTAAGTT................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.................................................................................GGTGGGGGGGCGGCGTCGCCGAACCT................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................CGGCAAGGTTTATTACAAGAAGAT....................................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0
.............................................................................................................GGCAAGGTTTATTACAAGAAGATACTCAT................................................................................................................. 29 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................AGGAAGGTTGAAATTAAA................................................................ 18 2 20 0.05 1 0 0 0 0 0 1
.........................................................................................................................................................CTAATATAGGTAGTCAAGGAAGGTTT........................................................................ 26 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................CTTAATATAGGTAGTCAAGGAAGGTTT........................................................................ 27 1 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................................................ACGGTAACCCATCTGGTGCAGTAT................ 24 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................TGGCAAGGTTTATTACAAGAAGATA...................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................CGACGGCAACCCATCTGGTGCAGTA................. 25 1 20 0.05 1 0 0 1 0 0 0
..................................CGAACGTTCACGACATCATTCTA.................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................ATTAATATAGGTAGTCAAGGAAGGT.......................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................TGAAGATACTCATCCAGTACCTATAT.................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
....TACGCAAGTACGCGCTACAGTTT................................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................TGCAGTATAAGCGGGCCGGTT... 21 0 20 0.05 1 0 0 0 0 1 0
AGGATACGCAAGTACGCGCTACAGT.................................................................................................................................................................................................................................. 25 0 20 0.05 1 0 0 1 0 0 0
.GGATACGCAAGTACGCGCTACAGTTT................................................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TTGGCAAGGTTTAATACAAGAAGAT....................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.GGATACGCAAGTACGCGCTATAGTT................................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................TTAATATAGGTAGTCAAGGAAGGT.......................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
.....................................................TCTATAACTATGGATGTGTTTACGGT............................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................TGGCAAGGTTTATTACAAGAAGATACT.................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................TATAGGTAGTCAAGGAAGGTTTAAG..................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.............................AACTTCGAACGTTCACGACATCATTCT................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................ACAAGAAGATACTCATCCAGTACCTATAT.................................................................................................... 29 0 20 0.05 1 0 0 1 0 0 0
.............................................................................................................................................................................................................TGTACGACGGTAACCCATCTGGTGCAGT.................. 28 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................TAGGTAGTCAAGGAAGGTTTAAGTCAA................................................................. 27 1 20 0.05 1 0 0 1 0 0 0
...............................................................................................................................................................................................................TACGACGGTAACCCATCTGGTGCAGT.................. 26 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TTGGCAAGGTTTATTGCAAGAAGAT....................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................GAAGGTTTAAGTTAAAAAGAGTAGTCT..................................................... 27 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................TGGCAAGGTTTATTACAAGAAGATAC..................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................................AATATAGGTAGTCAAGGAAGGTT......................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...............................CTTCGAACGTTCACGACATCATTCT................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................ACGACAGTAACCCATCCGGTGCAGTA................. 26 2 20 0.05 1 0 0 1 0 0 0
..................................CGAACGTTCACGACATCA....................................................................................................................................................................................................... 18 0 20 0.05 1 0 0 1 0 0 0
...............................................................................GTGGTGGGGGGGCGGCGTCGCC...................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................................GTACGACGGTAACCCATCTGGTG...................... 23 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................CTAGGTAGTCAAGGAAGGTTTAAGTT................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
..........................................................................GTGGTGTGGTGGGGGGGC............................................................................................................................................................... 18 2 20 0.05 1 0 0 0 1 0 0
.............................................................................GTGTGGTGGGGGGGCGGCG........................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 1 0
..................................CGAACGTTCACGACACCATTCCAT................................................................................................................................................................................................. 24 2 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................................................................................GGTGCAGTATAAGCGGGCCGGTTTT. 25 0 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................................................AGTCTTTTCTGTTGTACGACGGTAA................................. 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................AGGTAGTCAAGGAAGGTTTAAGTTAA................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................CGGTAACCCATCTGGTGCAGTAT................ 23 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................TATAGGTAGTCAAGGAAGGTT......................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
...........................................................................................................TTGGCAAGGTTTATTACAAGAAGATAC..................................................................................................................... 27 0 20 0.05 1 0 0 1 0 0 0
.............................................................................GTGTGGGGGGGGGGCGGCGT.......................................................................................................................................................... 20 1 20 0.05 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................CTCTGGTGCAGTATAAGCGGGCCGGT.... 26 1 20 0.05 1 1 0 0 0 0 0
..................................CGAACGTTCACGACATCATTCCAT................................................................................................................................................................................................. 24 1 20 0.05 1 0 0 1 0 0 0
..................................CGAACGTTCACGACATCAGT..................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 1 0 0 0
AGGATACGCAAGTACGCGCTATAGTT................................................................................................................................................................................................................................. 26 1 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................................GTAGTCAAGGAAGGTTTA....................................................................... 18 0 20 0.05 1 0 0 0 0 1 0
...............................................................................................................................................................TAGGTAGTCAAGGAAGGTTTA....................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
........................................................................TTACGGTGTGGTGGGGGGGC............................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0
..............................................................................................................................................................................GGTTTAAGTTAAAAAGAGTAGTCT..................................................... 24 0 20 0.05 1 0 0 1 0 0 0
..........................................................................................................TTTGGCAAGGTTTATTACAAGAAGA........................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
.............................................................TATGGATGTTTTTACGTTGTGGTGG..................................................................................................................................................................... 25 2 20 0.05 1 0 0 0 0 0 1
..................................................................................................................................................................................................................GACGGTAACCCATCTGGTGCAGT.................. 23 0 20 0.05 1 1 0 0 0 0 0
...ATACGCAAGTACGCGCTACAGTTTTT.............................................................................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................TTACGACGGTAACCCATCTGGTGCAGTA................. 28 1 20 0.05 1 0 0 1 0 0 0
..................................CGAACGTTCACGACATCATTCTATCTT.............................................................................................................................................................................................. 27 3 20 0.05 1 0 0 1 0 0 0
..................................CGAACGTTCACGACATCATTCTATCT............................................................................................................................................................................................... 26 2 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................................................................GTACGACGGTAACCCACCTGGTGCAGTA................. 28 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................GGCAAGGTTTATTACAATAAGAT....................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................CTCATCCAGTACCTATATTATTAATA............................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
.......GCAAGTACGCGCTACAGTT................................................................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TTGGCAAAGTTTATTACAAGAAGAT....................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................TATTAATATAGGTAGTCAAGGAGGGTT......................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................TAGAAGAAGATACTCATCCAGTACCT........................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................AGAGTAGTCTTTTCTGTTGTACGAC...................................... 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................ACGACGGTAACCCATCTGGTGCAGTA................. 26 0 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................TTAATATAGGTAGTCAAGGAATGTT......................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
......................................CGTTCACGACATCATTCTAT................................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
....TACCCAAGTACGCGCTACAGTTTTT.............................................................................................................................................................................................................................. 25 1 20 0.05 1 0 0 1 0 0 0
....TACGCAAGTACGCGCTACAGTTTT............................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 1 0 0 0
.................................TCGAACGTTCACGACATCATT..................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
...........................................................................................................TTGGCAAGGTTTATTACAAGATGAT....................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0
...........................................................................................................TTGGCAAGGTTTATTACAAGAAGATT...................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TTTGCAAGGTTTATTACAAGAAGAT....................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6359:1153566-1153816 - dmo_547 TCCTATGCGTTCATGCGCGATGTCAAAAATTGAAGCTTGCAAGTGCTGTAGTAAGATATTGATACCTACACAAATGCCACACCACCCCCCCGCCGCAGCGGCTTGGAAACCGTTCCAAATAATGTTCTTCTATGAGTAGGTCATGG-----ATATAATAAT----TATATCCATCAGTTCCTTCCAAATTCAATTT-TTCTCATCAGAAAAGACAACATGCTGCCATTGGGTAGAC---------------------CACGTCATATTCGCCCGGCCAAAAT
droVir3 scaffold_12728:213825-214046 - TTATCTGCATTCATACGCGAAGCTAAAAACTGCAATTCGCAGGTGCGATAGTATGATAAAGATCCCCACACCA-----------TCACACCACCCTCTCGGCTGTGGAGGCGGTCCGAATGATGAT----TATACGTAGATCATGG-----AAAA-AAAAT----TATAGCCAATGGGCTCTTCCAAATTAAATG--TTTTCATCTGAAACGACAACGTAGTGCCACTCAGAAGAC---------------------CACGACATATTTG------------
droWil2 scf2_1100000004719:4216-4456 + TCCTGTGCGTTCATGCGCGATGTCAAAAATTGAAGGTCGCAAGTGCCGTAGTACGATATTGCTCCCCATACCA-----------TAACCCCCCCCACCCGGCTGTGCAACCGGTCCAAGTGATGTTCTTCTTTACGTAGGTCATGG-----AAATAATAAT----TGTAGCCATCAGGTCCTTCCAAATTAAATTTTTTTTCATCTGAAAAGACAACCTATCGCCATTGGGTAGAC---------------------CACGTCATGTGCACTTGTGCAAAAT
dp5 Unknown_group_108:16590-16830 - ACATTTGCATTCATTTTCGATGACAGAAACTGTAGCTCACAAGTCCCATAATAGGAAATCGCACTCCATACCA-----------TTATGCCTCCCGCGCAGCTGTGGTTTCGGCTCAAAACACATTCCTCCTTTCGTAGGTCATGG-----TAATAGTAGT----TATAGCCATCCGGTCCATCCAGGTTAACTTTTTTTTCATCGGAAAACACGACGTCGTGCCACTCCTTGTTC---------------------CATGTCATATGTTCCTTTCCAAAAC
droPer2 scaffold_43:308259-308498 - ACATTTGCATTCATTTTCGATGACAGAAACTGTAGCTCACAAGTCCCATAATAGGAAATCGCACCCCATACCA-----------TTATGCCTCCCGCGCAGCTGTGGTTTCGGCTCAAAACACATTCCTCCTTTCGTAGGTCATGG-----TAATAGTAGT----TATAGCCATCCGGTCCATCCAGGTTAACT-TTTTTTCATCGGAAAACACGACGTCGTGCCACTCCTTGTTC---------------------CATGTCATATGTTCCTTTCCAAAAC
droAna3 scaffold_13230:2712431-2712671 + GCCATGGCGTTCATTTTCGGGGTGAGAAATTGTAACTCATAGGTGCCATAATAGGATATGGCTCCCCATACCA-----------TTACGCCACCTACCCGGCTATGTAAACGATCTAAAATATGCTCTTCTTTACGCATGTCGTGG-----AAATAATAAT----TATAGCCGTCAGGGCCTTCTAAATTAAATTTCTTTTCATCGGAAAAGACTACAAAGCGCCACTCCTTCGAC---------------------CATGTCATATGCGAGCGAGCAAAAT
droBip1 scf7180000396574:56857-57096 - TTTTCGGCATTCATACGCGATGTTAAAAACTGCAACTCGCAGGTGCCAAAGTACGATATGGCCCCCCACACCA-----------TGACACCCCCTTCCCGGCTGTGCAGGCGGTCCAGAGTATGCTCCTCTTTGCGTAGGTCATGA-----AAGTAATAGT----TATACCCATCGGGCCCTTCTAAATTAAATTT-TTTTCATCAGAGAAAACAACGTATTGCCACTCAGTAGTC---------------------CATGACATGTGCAACCGAGAGAAAT
droKik1 scf7180000302366:758782-759022 + GCTTTTGCGTTCATGTTTGAGGATAAGAATTGGAGCTCACAAGTCCCATAGTAAGATATGGCTCCCCAAACCA-----------TAACTCCGCCTACTCGACTATGTAAACGCTCCAATTGATGCGTCTCTTTCCTGAGATCGTGA-----AAATAATAAT----TGTAGCCATCTGGCCCCTCCAAATTGAACTTTTTTTCATCAGAAAACACTACGCGCTTCCACTCGTTACAC---------------------CATGACATATTGACGCGGCAAAAGG
droFic1 scf7180000454066:378229-378469 - GCCACGGCGTTCATTTTCGGGGTGAGAAATTGTAACTCACAGGTGCCATAATAGGATATGGCTCCCCATACCA-----------TTACGCCACCTACCCGGCTATGTAAACGATCTAAAATATGCTCTTCTTTACGCATTTCATGG-----AAATAATAAT----TATAGCCGTCAGGGCCTTCTAAATTAAATTTCTTTTCATTGGAAAAGACTACAAAGCGCCACTCCTTCGAC---------------------CATGTCATATGCGAGCGAGCAAAAT
droEle1 scf7180000490996:550411-550470 - AAATG-----------------TT----------GAAAACAATTGTTGCAGCAACATGTTGCTAAA-----------------------------------------------------------------------------------------------------------------------------------------TAAATAAAAACTACACCACTC----------------------------------------------------------
droRho1 scf7180000780091:391775-392014 + TTTTCCGCGTTCATCTTTGGGGTTAAAAACTGCAGTTCGCAGTTGCCATAATAGGATATGGCTCCCCATACCA-----------TTACTCCACCAACCCGGCTATGTAAGCGATCCAGATGATGCTCTTCCTTGCGTGAATCGTGG-----AAATAATAAT----TATATCCGTCTGGACCCTCTAGGTTAAATTT-TTTTCGTCTGAAAATACGACGTTATGCCACTCGTTGGAC---------------------CATGTCATATGCGTTCGAGCAAACT
droBia1 scf7180000302470:45813-46063 + CGATCGCCGTTCATCTTCTGATCGATAAAAATCAAGTCAATTGTTCCATAAAACGTGATGGCACCCCACACCA-----------TTACTCCACCTTCTCGGCTGTGGTGGCGACTTAAATATATCTCATCTTTT-----------A-----TAATAATATT----GAAAACCATCGGGGCCATCTAAATTAAAACGTTTTTCATCAGTAAAAACAACAGAACGCCAATCATTAGGCCGAGTGTCTGTTTAAACATTCCACGTCATGTATTCCTTTGCGAATT
droTak1 scf7180000414703:1845-2089 - TTTTCCGCTTTCATCTTTGGGGTTAAAAACTGCAGTTCGCAGTTGCCATAGTAGGATATGGCTCCCCATACCA-----------TTACTCCACCAACCCGGCTATGTAAGCGACCCAGATGATGCTCTTCCTTGCGTGAATCGTATAAAAAAAATAATAAT----TATATCCGTCAGGACCCTCTAGGTTAAATTT-TTTTCGTCTGAAAATACGACCGTATGCCATTCGTTGGAC---------------------CATGTCATATGCGTTCGAGCAAACT
droEug1 scf7180000408795:15357-15555 + CGATCGCCGTTCATCTTCTGATGAATAAAAATC-----------------------------------AACCA-----------TTACCCCACCTTCTCGGCAGTGGTGGCAGCTTAAAAATAGCTCATCTTTTCGCAAATCGTGA-----TAATAATTTT----GAAAGCCATCGGTGCCATCTAAATCAAAACGTTTTTCATCAGTAAAAACAGCAGAACGCCAATCATTAAAC---------------------CAAGTGTCAG-------ATTAAACA
dm3 chr3R:183354-183592 - ACGTTTGGGTTCATTTTCGAGGTGACAAACTGGAGCTCGCAAGTTCCATAAAAAGATATGGCTCCCCACACCA-----------TTACACCACCTGCACAAGTGTGATGACGGCTTAAAAAACATTCTTCCTTTCTTATATCATGG-----AAATAATAGT----TATAGCCATCCGGTCCATCGAGGTTGAACTTCTTTTCATCGGAGAAAACCACCGTCTTCCACTCCTTGTTC---------------------CACGTCATGTGTTCTCAGGCAAA--
droSim2 2r:516370-516599 - TCTCTCGCGTTCATGTTTGGTGCCAAAAACTGCAAATCACAGGGACCATATTTGGATATAACTCCCCATATCA-----------TGAGACCTCCAACCCGACTGTATAATCGGTCCAAAATGTGCTCC---TCACGAAAATCATGA-----TAGTAATGAC----TATATCCATCTGGTCCCTTCAGATTAAATTTCTTCTCGTCAGAAAATACGACATAATGCCACTCCTTAGAC---------------------CAGGTAATTCGTT--TG------GC
droSec2 scaffold_2898:3190-3432 - TCTTTCGCGTTCATTTTTGTCTTTA-AAACTGCAATTCACAGGGGCCATAATAGGATACTGCGCCCCATACTA-----------TGACACCTCCAAACCGACTGTGTAAGCGATCTAAAATGTGCTCCTCTTTACGCAAATCAAGA-----TAGTAATGACTACATATAGCCGTCTGGATCCTCTAGATAA-ATTTCTTCTCATCTGAAAATACGACATAATGCCACTCTTTAGAC---------------------CAGGTCATATAAGCTCAAGCAAAAC
droYak3 3R:930083-930264 - TCTTTCGCGTTTATTTTTATTGTTAAATACTGCAATTCCCAGGGGCCATAATAGGATACTGCGCTCCATACCA-----------TCACACCTCCAACCCGACTGTGTAAGCGATCCAAAATGTGC-----TTTACGCAAATCATGA-----TAGTAATTAA----TATAGCC----------TCCAGATTAAATTTCTTCTCGTCCGTAAATACGAC-----------------------------------------------------------------
droEre2 scaffold_4784:24592868-24593108 - GCAATGACATTCATACGGCTGGTAAAAAACTGCAGTTCTATAGTGCCAAAGTATGCTATAGCTCCCCACACCA-----------TGACACCACCCGCACGGTTGTGCAATCGATCAAAAGTATGTTCTTCCTTTCTGAGACCATGA-----AAGTAGTGGG----CATAGCCGTCAGGACCCTCCAAATTAAACTCATTTTCATCTGAAAAGACTACACGCTCCCACTCCTTAGTC---------------------CATGTCATATTTGATCGACAAAAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCCTATGCGTTCATGCGCGATGTCAAAAATTGAAGCTTGCAAGTGCTGTAGTAAGATATTGATACCTACACAAATGCCACACCACCCCCCCGCCGCAGCGGCTTGGAAACCGTTCCAAATAATGTTCTTCTATGAGTAGGTCATGG-----ATATAATAAT----TATATCCATCAGTTCCTTCCAAATTCAATTT-TTCTCATCAGAAAAGACAACATGCTGCCATTGGGTAGAC---------------------CACGTCATATTCGCCCGGCCAAAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................AC---------------------CACGTCATATTCGCCCGG.......20200.153300000
.................................................................................................................................................................................................................................................................CACGTCATATTCGCCCGG.......18200.051100000
..........................................................................................................................................................................................................................................AC---------------------CACGTCATATTCGCCCGGC......21200.051000010
...........................................................................................................................................................................................................TCAGAAAAGACAACATGCTGC..........................................................21200.051000010
.........................................................................................................................................................................................................................ATGCTGCCATTGGGTAGAC---------------------CACGTC...................25200.051100000
..........................................................................................................................TGTTCTTCTATGAGTAGGTCATGG-----...................................................................................................................................24200.051000010
........................................................................................................................................................................................................TCATCAGAAAAGACAACATGCTGC..........................................................24200.051000010
............................................................................................................................TTCTTCTATGAGTAGGTCATGG-----ATAT...............................................................................................................................26200.051100000
....................................................................................................................................................................................................................ACAACATGCTGCCATTGGGTAGA...............................................23200.051100000
.............................................................................................................................................................................................................AGAAAAGACAACATGCTGCCATTGGG...................................................26200.051100000
................................................TAGTAAGATATTGATACCTACACA..................................................................................................................................................................................................................24200.051000010
droVir3
TTATCTGCATTCATACGCGAAGCTAAAAACTGCAATTCGCAGGTGCGATAGTATGATAAAGATCCCCACACCA-----------TCACACCACCCTCTCGGCTGTGGAGGCGGTCCGAATGATGAT----TATACGTAGATCATGG-----AAAA-AAAAT----TATAGCCAATGGGCTCTTCCAAATTAAATG--TTTTCATCTGAAACGACAACGTAGTGCCACTCAGAAGAC---------------------CACGACATATTTG------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droWil2
TCCTGTGCGTTCATGCGCGATGTCAAAAATTGAAGGTCGCAAGTGCCGTAGTACGATATTGCTCCCCATACCA-----------TAACCCCCCCCACCCGGCTGTGCAACCGGTCCAAGTGATGTTCTTCTTTACGTAGGTCATGG-----AAATAATAAT----TGTAGCCATCAGGTCCTTCCAAATTAAATTTTTTTTCATCTGAAAAGACAACCTATCGCCATTGGGTAGAC---------------------CACGTCATGTGCACTTGTGCAAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................TGAAGGTCGCAAGTGCCGTAGTACGA..................................................................................................................................................................................................................................2624.50905040
...........................................TGCCGTAGTACGATATTGCTCCCCA......................................................................................................................................................................................................................2522.50505000
.............TGCGCGATGTCAAAAATTGAAGGTCG...................................................................................................................................................................................................................................................2621.50300030
....................TGTCAAAAATTGAAGGTCGCAAG...............................................................................................................................................................................................................................................2321.50301020
.............................TTGAAGGTCGCAAGTGCCGTAGTACG...................................................................................................................................................................................................................................2621.00200020
..........TCATGCGCGATGTCAAAAATTGAAGG......................................................................................................................................................................................................................................................2621.00201010
..............................TGAAGGTCGCAAGTGCCGTAGTACG...................................................................................................................................................................................................................................2521.00201010
.......................CAAAAATTGAAGGTCGCAAGTGCCG..........................................................................................................................................................................................................................................2521.00202000
TCCTGTGCGTTCATGCGCGATGTCA.................................................................................................................................................................................................................................................................2550.60301020
.............................TTGAAGGTCGCAAGTGCCGTAGTACGA..................................................................................................................................................................................................................................2720.50100010
....................TGTCAAAAATTGAAGGTCGCAAGTGC............................................................................................................................................................................................................................................2620.50100010
....................................TCGCAAGTGCCGTAGTACGATATTG.............................................................................................................................................................................................................................2520.50101000
...........................................TGCCGTAGTACGATATTGCTCCCCAT.....................................................................................................................................................................................................................2620.50101000
..............................TGAAGGTCGCAAGTGCCGTAGTACGAT.................................................................................................................................................................................................................................2720.50100010
................................................TAGTACGATATTGCTCCCCA......................................................................................................................................................................................................................2020.50100010
........................................AAGTGCCGTAGTACGATATTGCTCCCC.......................................................................................................................................................................................................................2720.50101000
....................TGTCAAAAATTGAAGGTCGCAAGTG.............................................................................................................................................................................................................................................2520.50101000
...............................GAAGGTCGCAAGTGCCGTAGTACGA..................................................................................................................................................................................................................................2520.50101000
......................TCAAAAATTGAAGGTCGCAAGTGC............................................................................................................................................................................................................................................2420.50101000
............................ATTGAAGGTCGCAAGTGCCGTAGTACT...................................................................................................................................................................................................................................2720.50100010
......................TCAAAAATTGAAGGTCGCAAGTGCCG..........................................................................................................................................................................................................................................2620.50101000
....................................TCGCAAGTGCCGTAGTACGATATTGC............................................................................................................................................................................................................................2620.50101000
...TGTGCGTTCATGCGCGATGTCAAAAAT............................................................................................................................................................................................................................................................2750.20101000
dp5
ACATTTGCATTCATTTTCGATGACAGAAACTGTAGCTCACAAGTCCCATAATAGGAAATCGCACTCCATACCA-----------TTATGCCTCCCGCGCAGCTGTGGTTTCGGCTCAAAACACATTCCTCCTTTCGTAGGTCATGG-----TAATAGTAGT----TATAGCCATCCGGTCCATCCAGGTTAACTTTTTTTTCATCGGAAAACACGACGTCGTGCCACTCCTTGTTC---------------------CATGTCATATGTTCCTTTCCAAAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ACATTTGCATTCATTTTCGATGACAGAAACTGTAGCTCACAAGTCCCATAATAGGAAATCGCACCCCATACCA-----------TTATGCCTCCCGCGCAGCTGTGGTTTCGGCTCAAAACACATTCCTCCTTTCGTAGGTCATGG-----TAATAGTAGT----TATAGCCATCCGGTCCATCCAGGTTAACT-TTTTTTCATCGGAAAACACGACGTCGTGCCACTCCTTGTTC---------------------CATGTCATATGTTCCTTTCCAAAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GCCATGGCGTTCATTTTCGGGGTGAGAAATTGTAACTCATAGGTGCCATAATAGGATATGGCTCCCCATACCA-----------TTACGCCACCTACCCGGCTATGTAAACGATCTAAAATATGCTCTTCTTTACGCATGTCGTGG-----AAATAATAAT----TATAGCCGTCAGGGCCTTCTAAATTAAATTTCTTTTCATCGGAAAAGACTACAAAGCGCCACTCCTTCGAC---------------------CATGTCATATGCGAGCGAGCAAAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................TAACTCATAGGTGCCATAATAGGATA................................................................................................................................................................................................................................26918.89170251423000
........................................................................................................................................................................................................TCATCGGAAAAGACTACAAAGCGCC.........................................................25817.13137111260000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------CATG.....................26813.0010475217010
..............................TGTAACTCATAGGTGCCATAATAGGATA................................................................................................................................................................................................................................2898.787920563000
........................................................................................................TGTAAACGATCTAAAATATGCTCTTC........................................................................................................................................................2698.337518534000
........................................................................................................................................................................................................TCATCGGAAAAGACTACAAAGCGCCAC.......................................................2787.135737200000
.................................................................................................................................................................................................................AAGACTACAAAGCGCCACTCCTTCGAC---------------------.........................2786.385134170000
..............................TGTAACTCATAGGTGCCATAATAGGA..................................................................................................................................................................................................................................2694.674224153000
.................................................................................................................................................................................................................AAGACTACAAAGCGCCACTCCTTCGA...............................................2684.00322552000
........................................................................................................TGTAAACGATCTAAAATATGCTCTTCTT......................................................................................................................................................2893.673312201000
.............................TTGTAACTCATAGGTGCCATAATAGG...................................................................................................................................................................................................................................2693.673313128000
..............................TGTAACTCATAGGTGCCATAATAGG...................................................................................................................................................................................................................................2593.11281396000
..............................................................TCCCCATACCA-----------TTACGCCACCTACCCGGC....................................................................................................................................................................................2983.002410140000
........................................................TATGGCTCCCCATACCA-----------TTACGCCACC............................................................................................................................................................................................2782.88232210000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------CATGT....................2782.75221930000
..............................................................TCCCCATACCA-----------TTACGCCACCTACCCGG.....................................................................................................................................................................................2882.752212100000
........................................................................................................TGTAAACGATCTAAAATATGCTCTTCT.......................................................................................................................................................2792.672411121000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------CAT......................2582.13171151000
.................................................................................................................................................................................................................AAGACTACAAAGCGCCACTCCTTCG................................................2582.13171601000
.......................................................................................................................................................................................................TTCATCGGAAAAGACTACAAAGCGCC.........................................................2682.00161150000
........................................................................................................................................................................................................TCATCGGAAAAGACTACAAAGCGCCA........................................................2682.00161420000
...............................GTAACTCATAGGTGCCATAATAGGATA................................................................................................................................................................................................................................2791.89175120000
........................................................................................................................................................................................................TCATCGGAAAAGACTACAAAGCGCCACT......................................................2881.88151230000
......................................................................................................................................................................................................TTTCATCGGAAAAGACTACAAAGCGCC.........................................................2781.88152130000
......................................................................................................TATGTAAACGATCTAAAATATGCTCT..........................................................................................................................................................2691.6715490020
..............................................................TCCCCATACCA-----------TTACGCCACCTACCC.......................................................................................................................................................................................2681.6313670000
................................TAACTCATAGGTGCCATAATAGGATATG..............................................................................................................................................................................................................................2891.56141220000
.............................TTGTAACTCATAGGTGCCATAATAGGA..................................................................................................................................................................................................................................2791.5614932000
..............................................................TCCCCATACCA-----------TTACGCCACCTACC........................................................................................................................................................................................2581.50120120000
...........................................................................................................................................................................................................TCGGAAAAGACTACAAAGCGCCACTCC....................................................2781.5012660000
..........................................................TGGCTCCCCATACCA-----------TTACGCCACC............................................................................................................................................................................................2581.5012390000
..........................................................................................................TAAACGATCTAAAATATGCTCTTCTT......................................................................................................................................................2691.4413481000
..................................................................CATACCA-----------TTACGCCACCTACCCGGC....................................................................................................................................................................................2581.3811290000
......................................................................................................................................................................................................TTTCATCGGAAAAGACTACAAAGCGC..........................................................2681.3811470000
......................................................................................................TATGTAAACGATCTAAAATATGCTCTTC........................................................................................................................................................2891.3312381000
..............................TGTAACTCATAGGTGCCATAATAGGAT.................................................................................................................................................................................................................................2791.3312552000
..............................................................TCCCCATACCA-----------TTACGCCACCTACCCG......................................................................................................................................................................................2781.2510820000
..........................................................TGGCTCCCCATACCA-----------TTACGCCACCTA..........................................................................................................................................................................................2781.2510820000
....TGGCGTTCATTTTCGGGGTGAGAAAT............................................................................................................................................................................................................................................................2661.177700000
................................................................................................................................................................................................................AAAGACTACAAAGCGCCACTCCTTC.................................................2581.008341000
......................TGAGAAATTGTAACTCATAGGTGCC...........................................................................................................................................................................................................................................2581.008080000
.................................................................................................................................................................................................................AAGACTACAAAGCGCCACTCCTTC.................................................2481.008521000
.....................................................................................................................................................................................................TTTTCATCGGAAAAGACTACAAAGCGCC.........................................................2881.008080000
........................................................................................................................................................................................................TCATCGGAAAAGACTACAAAGCGC..........................................................2481.008350000
.......................................................................................................................................................................................................................ACAAAGCGCCACTCCTTCGAC---------------------CATG.....................2581.008620000
..............................................................................................TACCCGGCTATGTAAACGATCTAAAATA................................................................................................................................................................2890.898350000
...............................................................................................................................................TGG-----AAATAATAAT----TATAGCCGTCAGGGCC.....................................................................................................2980.887070000
................................................................................................................................................................................................................AAAGACTACAAAGCGCCACTCCTTCGAC---------------------.........................2880.887520000
....................................................................TACCA-----------TTACGCCACCTACCCGGCTATG................................................................................................................................................................................2780.887520000
.........................................................................................................................................................................................................CATCGGAAAAGACTACAAAGCGCCAC.......................................................2680.887700000
.................................................................................................................................................................................................................AAGACTACAAAGCGCCACTCCTTCGAC---------------------CA.......................2980.887610000
....TGGCGTTCATTTTCGGGGTGAGAA..............................................................................................................................................................................................................................................................2460.835230000
...............................GTAACTCATAGGTGCCATAATAGGA..................................................................................................................................................................................................................................2590.787520000
.........................................................................................................................................................................................................................AAAGCGCCACTCCTTCGAC---------------------CATGTCA..................2680.756501000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------CATGTCA..................2980.756600000
..........................................................................................................................................................TAATAAT----TATAGCCGTCAGGGCCTTCTA................................................................................................2880.756600000
.................................................................................................................................................................................................................AAGACTACAAAGCGCCACTCCTT..................................................2380.756240000
.................................................................................................................................................G-----AAATAATAAT----TATAGCCGTCAGGGCC.....................................................................................................2780.756150000
...................................................................................................................................................................................................................GACTACAAAGCGCCACTCCTTCGAC---------------------CA.......................2780.756600000
....TGGCGTTCATTTTCGGGGTGAGAAA.............................................................................................................................................................................................................................................................2560.674400000
.........................................................................................................GTAAACGATCTAAAATATGCTCTTCTT......................................................................................................................................................2790.676510000
.............................TTGTAACTCATAGGTGCCATAATAG....................................................................................................................................................................................................................................2590.676420000
GCCATGGCGTTCATTTTCGGGGT...................................................................................................................................................................................................................................................................2360.674040000
....................................TCATAGGTGCCATAATAGGATATGG.............................................................................................................................................................................................................................2590.676420000
...................................................................................................................................................................................................................GACTACAAAGCGCCACTCCTTCGAC---------------------.........................2580.635410000
.................................................................................................................................................................................................................AAGACTACAAAGCGCCACTCCTTCGAC---------------------C........................2880.635500000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------CA.......................2480.635140000
.......................................................................................................................................................................................................TTCATCGGAAAAGACTACAAAGCGCCAC.......................................................2880.635410000
.......................................................................................................................................GCATGTCGTGG-----AAATAATAAT----TATAGCC..............................................................................................................2880.635050000
................................................................................................................................................................................................................AAAGACTACAAAGCGCCACTCCTTCG................................................2680.635410000
........................................................................................................................................................................................................TCATCGGAAAAGACTACAAAGCGCCACTC.....................................................2980.635410000
......................................................................................................TATGTAAACGATCTAAAATATGCTC...........................................................................................................................................................2590.565140000
.............................TTGTAACTCATAGGTGCCATAATAGGAT.................................................................................................................................................................................................................................2890.565410000
................................TAACTCATAGGTGCCATAATAGGA..................................................................................................................................................................................................................................2490.565230000
..........................................................................................................TAAACGATCTAAAATATGCTCTTCT.......................................................................................................................................................2590.565140000
.............................TTGTAACTCATAGGTGCCATAATAGGATA................................................................................................................................................................................................................................2990.565140000
...................................................................................................................................................................................................................................TCCTTCGAC---------------------CATGTCATATGCGAGCGAG......2860.503300000
.........................................................................................................................................................................................................CATCGGAAAAGACTACAAAGCGCC.........................................................2480.504220000
....TGGCGTTCATTTTCGGGGTGAGA...............................................................................................................................................................................................................................................................2360.503012000
........................................................TATGGCTCCCCATACCA-----------TTACGCC...............................................................................................................................................................................................2480.504040000
..................................................................................................................................................................................................................AGACTACAAAGCGCCACTCCTTCGAC---------------------.........................2680.504400000
..............................................................................................................................................................................................................GAAAAGACTACAAAGCGCCACTCCT...................................................2580.504310000
........................................................................................................................................CATGTCGTGG-----AAATAATAAT----TATAGCC..............................................................................................................2780.504040000
..........................................................................................................................................................TAATAAT----TATAGCCGTCAGGGCCTTC..................................................................................................2680.504040000
.................................................................CCATACCA-----------TTACGCCACCTACCCGGC....................................................................................................................................................................................2680.504130000
....................................................................TACCA-----------TTACGCCACCTACCCGGCTA..................................................................................................................................................................................2580.504310000
....TGGCGTTCATTTTCGGGGTGAG................................................................................................................................................................................................................................................................2260.503300000
..............................................................TCCCCATACCA-----------TTACGCCACC............................................................................................................................................................................................2180.504040000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------.........................2280.504220000
........................................................................A-----------TTACGCCACCTACCCGGC....................................................................................................................................................................................1990.444220000
..........................................................................................................TAAACGATCTAAAATATGCTCTTCTTTA....................................................................................................................................................2890.444220000
................................TAACTCATAGGTGCCATAATAGGATAT...............................................................................................................................................................................................................................2790.444220000
..........................................................................................................................................................................................................ATCGGAAAAGACTACAAAGCGCCACT......................................................2680.383120000
................................................................CCCATACCA-----------TTACGCCACCTACCCGGC....................................................................................................................................................................................2780.383030000
..................................................................................................................................................................................................................AGACTACAAAGCGCCACTCCTTCG................................................2480.383210000
..........................................................TGGCTCCCCATACCA-----------TTACGCCACCTAC.........................................................................................................................................................................................2880.383210000
...........................AATTGTAACTCATAGGTGCCATAATA.....................................................................................................................................................................................................................................2680.383300000
..........................................................................................................................................................TAATAAT----TATAGCCGTCAGGGCCT....................................................................................................2480.383030000
...........................AATTGTAACTCATAGGTGCCATAATAG....................................................................................................................................................................................................................................2780.383300000
..............................................................................................................................................................................................................GAAAAGACTACAAAGCGCCACTCCTT..................................................2680.383300000
..........................................................................................................................................................TAATAAT----TATAGCCGTCAGGGCCTTCT.................................................................................................2780.383120000
GCCATGGCGTTCATTTTCGGGGTGA.................................................................................................................................................................................................................................................................2560.332110000
GCCATGGCGTTCATTTTCGGGGTG..................................................................................................................................................................................................................................................................2460.332200000
........................................................................................................TGTAAACGATCTAAAATATGCTCT..........................................................................................................................................................2490.333030000
............................ATTGTAACTCATAGGTGCCATAATAGGA..................................................................................................................................................................................................................................2890.333300000
..........................................................................................CACCTACCCGGCTATGTAAACGATC.......................................................................................................................................................................2590.333030000
......................................................................................................................................................................................................................................TTCGAC---------------------CATGTCATATGCGAGCGAGC.....2660.332100010
....TGGCGTTCATTTTCGGGGTGAGAAAA............................................................................................................................................................................................................................................................2660.332110000
.................................AACTCATAGGTGCCATAATAGGATA................................................................................................................................................................................................................................2590.333300000
..........................................................................................................TAAACGATCTAAAATATGCTCTTCC.......................................................................................................................................................2590.333030000
........................................................................................................TGTAAACGATCTAAAATATGCTCTT.........................................................................................................................................................2590.333030000
..........................................................................................................TAAACGATCTAAAATATGCTCTTC........................................................................................................................................................2490.333111000
.......................................................................................................................................................................................................................................TCGAC---------------------CATGTCATATGCGAGCGAGC.....2560.332110000
......................................................................................................TATGTAAACGATCTAAAATATGCTCTT.........................................................................................................................................................2790.333021000
..........................................................TGGCTCCCCATACCA-----------TTACGCCAC.............................................................................................................................................................................................2480.252020000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------C........................2380.252020000
...............................................................CCCCATACCA-----------TTACGCCACCTACCCGGC....................................................................................................................................................................................2880.252200000
.....................................................................................................................................................................................................TTTTCATCGGAAAAGACTACAAAGCGC..........................................................2780.252020000
..............................................................................................................................................................................................................GAAAAGACTACAAAGCGCCACTCCTTC.................................................2780.252101000
..........................................................................................................................TGCTCTTCTTTACGCATGTCGTGG-----AAA................................................................................................................................2780.252200000
...................................................................................................................................................................................................................GACTACAAAGCGCCACTCCTTCGAC---------------------C........................2680.252200000
...................................................................................................................................................................................................................GACTACAAAGCGCCACTCCTTCGA...............................................2480.252200000
..................................................................CATACCA-----------TTACGCCACCTACCCGGCTATG................................................................................................................................................................................2980.252200000
.........................................................................................................................................................................................................CATCGGAAAAGACTACAAAGCGCCA........................................................2580.252200000
.....................................................................................................................................................................................................................CTACAAAGCGCCACTCCTTCGAC---------------------C........................2480.252200000
..........................................................................................................................................................TAATAAT----TATAGCCGTCAGGG.......................................................................................................2180.252002000
..........................................................TGGCTCCCCATACCA-----------TTACGCCACCT...........................................................................................................................................................................................2680.252200000
...........................................................................................................................................................................................................TCGGAAAAGACTACAAAGCGCC.........................................................2280.252020000
...........................................................................................................................................................................................................TCGGAAAAGACTACAAAGCGCCACT......................................................2580.252110000
..............................................................TCCCCATACCA-----------TTACGCCACCTAC.........................................................................................................................................................................................2480.252020000
................................................................................................................................................................................................................AAAGACTACAAAGCGCCACTCCTT..................................................2480.252110000
........................................................TATGGCTCCCCATACCA-----------TTACGCCACCTA..........................................................................................................................................................................................2980.252200000
.......................................................................................................................................................................................................TTCATCGGAAAAGACTACAAAGCGCCA........................................................2780.252020000
..................................................................................................................................................................................................................AGACTACAAAGCGCCACTCCTTCGAC---------------------CA.......................2880.252200000
..................................................................CATACCA-----------TTACGCCACCTACCC.......................................................................................................................................................................................2280.252110000
.........................................................................................................................................................................................................CATCGGAAAAGACTACAAAGCGCCACTC.....................................................2880.252200000
................................................................CCCATACCA-----------TTACGCCACCTACCCGG.....................................................................................................................................................................................2680.252110000
..........................................................................................................................................TGTCGTGG-----AAATAATAAT----TATAGCC..............................................................................................................2580.252020000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------CATGTC...................2880.252200000
...............................................................................................................................................................................................................AAAAGACTACAAAGCGCCACTCCTT..................................................2580.252200000
.................................................................................................................................................................................................................AAGACTACAAAGCGCCACTCCT...................................................2280.252110000
........................................................TATGGCTCCCCATACCA-----------TTACGCCAC.............................................................................................................................................................................................2680.252020000
....................................................................TACCA-----------TTACGCCACCTACCCGGC....................................................................................................................................................................................2380.252020000
...........................AATTGTAACTCATAGGTGCCATAATAGG...................................................................................................................................................................................................................................2880.252110000
...............................................................CCCCATACCA-----------TTACGCCACCTACCCG......................................................................................................................................................................................2680.252200000
..........................................................................................CACCTACCCGGCTATGTAAACGATCTA.....................................................................................................................................................................2790.222110000
........................................................................................................TGTAAACGATCTAAAATATGCTCTTCTTT.....................................................................................................................................................2990.222020000
................................TAACTCATAGGTGCCATAATAGGAT.................................................................................................................................................................................................................................2590.222110000
..................................ACTCATAGGTGCCATAATAGGATATG..............................................................................................................................................................................................................................2690.222101000
....................................TCATAGGTGCCATAATAGGATAT...............................................................................................................................................................................................................................2390.222200000
...........................................................................................ACCTACCCGGCTATGTAAACGATCTAAAA..................................................................................................................................................................2990.222200000
....................................TCATAGGTGCCATAATAGGATATGGC............................................................................................................................................................................................................................2690.222110000
............................................................................................................AACGATCTAAAATATGCTCTTCTTTA....................................................................................................................................................2690.222110000
......................................................................................................TATGTAAACGATCTAAAATATGCT............................................................................................................................................................2490.222020000
.......................................................................................................ATGTAAACGATCTAAAATATGCTCTTC........................................................................................................................................................2790.222020000
..........................................................................................................TAAACGATCTAAAATATGCTCTTCTC......................................................................................................................................................2690.222020000
......................................ATAGGTGCCATAATAGGATA................................................................................................................................................................................................................................2090.222020000
...........................................................................................................AAACGATCTAAAATATGCTCTTCTT......................................................................................................................................................2590.222020000
..........................................................................................................TAAACGATCTAAAATATGCTCTTCTTT.....................................................................................................................................................2790.222020000
.....................................CATAGGTGCCATAATAGGATATG..............................................................................................................................................................................................................................2390.222002000
................................................................................................CCCGGCTATGTAAACGATCTAAAATA................................................................................................................................................................2690.222020000
GCCATGGCGTTCATTTTCGGGGTGAG................................................................................................................................................................................................................................................................2660.171100000
.........................................................................................................................................................................................................................................GAC---------------------CATGTCATATGCGAGCGAGCA....2460.171010000
GCCATGGCGTTCATTTTCGGGGTGAGA...............................................................................................................................................................................................................................................................2760.171100000
..........................................................................................................................................................................................................................................AC---------------------CATGTCATATGCGAGCGAGCAAAA.2660.171010000
.....GGCGTTCATTTTCGGGGTGAGA...............................................................................................................................................................................................................................................................2260.171100000
.........................................................................................................................................................................................................................................GAC---------------------CATGTCATATGCGAGCGAGCAAA..2660.171010000
.................................................................................................................................................................................................................................ACTCCTTCGAC---------------------CATGTCATATGCGAGC.........2760.171010000
...................................................................................................................................................................................................................................TCCTTCGAC---------------------CATGTCATATGCGAGCGA.......2760.171010000
.CCATGGCGTTCATTTTCGGGGTGAGA...............................................................................................................................................................................................................................................................2660.171100000
....TGGCGTTCATTTTCGGGGTGAGAAATTG..........................................................................................................................................................................................................................................................2860.171100000
....TGGCGTTCATTTTCGGGGTGAGT...............................................................................................................................................................................................................................................................2360.171010000
....TGGCGTTCATTTTCGGGGTGAGAAATT...........................................................................................................................................................................................................................................................2760.171100000
GCCATGGCGTTCATTTTCGGGGTGC.................................................................................................................................................................................................................................................................2560.171010000
....TGGCGTTCATTTTCGGGGTGA.................................................................................................................................................................................................................................................................2160.171100000
....TGGCGTTCATTTTCGGGGTGAGAAT.............................................................................................................................................................................................................................................................2560.171100000
...ATGGCGTTCATTTTCGGGG....................................................................................................................................................................................................................................................................1960.171010000
...................................................................................................................................................................................................................................TCCTTCGAC---------------------CATGTCATATGCGAG..........2460.171010000
....TGGCGTTCATTTTCGGGGTGATT...............................................................................................................................................................................................................................................................2360.171010000
..............................................CATAATAGGATATGGCTCCCCATACCA-----------......................................................................................................................................................................................................27130.152200000
................................................TAATAGGATATGGCTCCCCATACC..................................................................................................................................................................................................................24130.152011000
..................................................................................................................................................................................GCCTTCTAAATTAAATTTCTTTTC................................................................................2470.141010000
...............................................................................................................................................................................AGGGCCTTCTAAATTAAATTTCTTTTCA...............................................................................2870.141100000
........................................................................................................................................................................................TAAATTAAATTTCTTTTCATCGGA..........................................................................2470.141010000
.....................................................................................................................................................................................TTCTAAATTAAATTTCTTTTCATCGGA..........................................................................2770.141001000
................................................................................................................................................................................................ATTTCTTTTCATCGGAAAAGACT...................................................................2370.141010000
.......................................................................................................................................................................................................TTCATCGGAAAAGACTACAAAGCGCCT........................................................2780.131010000
........................................................................................................................................................................................................................CAAAGCGCCACTCCTTCGAC---------------------CATGT....................2580.131100000
...............................................................CCCCATACCA-----------TTACGCCACCTACC........................................................................................................................................................................................2480.131010000
.........................................................................................................................................................ATAATAAT----TATAGCCGTCAGGGCCT....................................................................................................2580.131010000
...............................................................CCCCATACCA-----------TTACGCCACCTACCCGG.....................................................................................................................................................................................2780.131100000
.............................................................................................................................................................................................................GGAAAAGACTACAAAGCGCCACTCCTTC.................................................2880.131100000
...............................................................................................................................................................................................................AAAAGACTACAAAGCGCCACTCCT...................................................2480.131001000
.....................................................................ACCA-----------TTACGCCACCTACCCGGCTATG................................................................................................................................................................................2680.131010000
...........................................................................................................................................................................................................TCGGAAAAGACTACAAAGCGCCACTCCT...................................................2880.131100000
..............................................................................................................................................................................................................................GCCACTCCTTCGAC---------------------CATG.....................1880.131100000
..........TCATTTTCGGGGTGAGAAATT...........................................................................................................................................................................................................................................................2180.131010000
................................................................CCCATACCA-----------TTACGCCACCTACCC.......................................................................................................................................................................................2480.131010000
..................................................................CATACCA-----------TTACGCCACCTACCCGGCTAT.................................................................................................................................................................................2880.131010000
...............TTCGGGGTGAGAAATTGTAACTCATAGG...............................................................................................................................................................................................................................................2880.131100000
.....................................................................................................................................................................................................................CTACAAAGCGCCACTCCTTCGAC---------------------CATG.....................2780.131100000
....................................................................................................................................................................................................................ACTACAAAGCGCCACTCCTTCGAC---------------------CATG.....................2880.131100000
.........................GAAATTGTAACTCATAGGTGCCATAAT......................................................................................................................................................................................................................................2780.131100000
.........TTCATTTTCGGGGTGAGAAATT...........................................................................................................................................................................................................................................................2280.131001000
......................................................................................................................................................................................................TTTCATCGGAAAAGACTACAAAGCGCCAC.......................................................2980.131100000
.......................................................................................................................................................................................................TTCATCGGAAAAGACTACAAAGCG...........................................................2480.131100000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCGAC---------------------CAC......................2580.131010000
......................................................................................................................................................................................................................TACAAAGCGCCACTCCTTCG................................................2080.131100000
..........................................................................................................................................................................................................................AAGCGCCACTCCTTCGAC---------------------CATGTCA..................2580.131100000
.........................................................................................................................................................................................................................AAAGCGCCACTCCTTCGAC---------------------CATG.....................2380.131010000
..........................................................................................................................................................................................................ATCGGAAAAGACTACAAAGCGCCACTCCT...................................................2980.131010000
........................................................................................................................................................................................................................CAAAGCGCCACTCCTTCGAC---------------------CATG.....................2480.131100000
..................................................................CATACCA-----------TTACGCCACCTACCCGGCTA..................................................................................................................................................................................2780.131010000
........................................................................................................................................................................................................TCATCGGAAAAGACTACAAAGCGCCACC......................................................2880.131010000
......................................................................CCA-----------TTACGCCACCTACCCGGC....................................................................................................................................................................................2180.131010000
.....................................................................................................................................................................................................................CTACAAAGCGCCACTCCTTCGAC---------------------CA.......................2580.131010000
droBip1
TTTTCGGCATTCATACGCGATGTTAAAAACTGCAACTCGCAGGTGCCAAAGTACGATATGGCCCCCCACACCA-----------TGACACCCCCTTCCCGGCTGTGCAGGCGGTCCAGAGTATGCTCCTCTTTGCGTAGGTCATGA-----AAGTAATAGT----TATACCCATCGGGCCCTTCTAAATTAAATTT-TTTTCATCAGAGAAAACAACGTATTGCCACTCAGTAGTC---------------------CATGACATGTGCAACCGAGAGAAATSizeHit CountTotal NormTotal
No Reads
droKik1
GCTTTTGCGTTCATGTTTGAGGATAAGAATTGGAGCTCACAAGTCCCATAGTAAGATATGGCTCCCCAAACCA-----------TAACTCCGCCTACTCGACTATGTAAACGCTCCAATTGATGCGTCTCTTTCCTGAGATCGTGA-----AAATAATAAT----TGTAGCCATCTGGCCCCTCCAAATTGAACTTTTTTTCATCAGAAAACACTACGCGCTTCCACTCGTTACAC---------------------CATGACATATTGACGCGGCAAAAGGSizeHit CountTotal NormTotal
No Reads
droFic1
GCCACGGCGTTCATTTTCGGGGTGAGAAATTGTAACTCACAGGTGCCATAATAGGATATGGCTCCCCATACCA-----------TTACGCCACCTACCCGGCTATGTAAACGATCTAAAATATGCTCTTCTTTACGCATTTCATGG-----AAATAATAAT----TATAGCCGTCAGGGCCTTCTAAATTAAATTTCTTTTCATTGGAAAAGACTACAAAGCGCCACTCCTTCGAC---------------------CATGTCATATGCGAGCGAGCAAAATSizeHit CountTotal NormTotal
No Reads
droEle1
AAATG-----------------TT----------GAAAACAATTGTTGCAGCAACATGTTGCTAAA-----------------------------------------------------------------------------------------------------------------------------------------TAAATAAAAACTACACCACTC----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTTCCGCGTTCATCTTTGGGGTTAAAAACTGCAGTTCGCAGTTGCCATAATAGGATATGGCTCCCCATACCA-----------TTACTCCACCAACCCGGCTATGTAAGCGATCCAGATGATGCTCTTCCTTGCGTGAATCGTGG-----AAATAATAAT----TATATCCGTCTGGACCCTCTAGGTTAAATTT-TTTTCGTCTGAAAATACGACGTTATGCCACTCGTTGGAC---------------------CATGTCATATGCGTTCGAGCAAACTSizeHit CountTotal NormTotal
No Reads
droBia1
CGATCGCCGTTCATCTTCTGATCGATAAAAATCAAGTCAATTGTTCCATAAAACGTGATGGCACCCCACACCA-----------TTACTCCACCTTCTCGGCTGTGGTGGCGACTTAAATATATCTCATCTTTT-----------A-----TAATAATATT----GAAAACCATCGGGGCCATCTAAATTAAAACGTTTTTCATCAGTAAAAACAACAGAACGCCAATCATTAGGCCGAGTGTCTGTTTAAACATTCCACGTCATGTATTCCTTTGCGAATTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTCCGCTTTCATCTTTGGGGTTAAAAACTGCAGTTCGCAGTTGCCATAGTAGGATATGGCTCCCCATACCA-----------TTACTCCACCAACCCGGCTATGTAAGCGACCCAGATGATGCTCTTCCTTGCGTGAATCGTATAAAAAAAATAATAAT----TATATCCGTCAGGACCCTCTAGGTTAAATTT-TTTTCGTCTGAAAATACGACCGTATGCCATTCGTTGGAC---------------------CATGTCATATGCGTTCGAGCAAACTSizeHit CountTotal NormTotal
No Reads
droEug1
CGATCGCCGTTCATCTTCTGATGAATAAAAATC-----------------------------------AACCA-----------TTACCCCACCTTCTCGGCAGTGGTGGCAGCTTAAAAATAGCTCATCTTTTCGCAAATCGTGA-----TAATAATTTT----GAAAGCCATCGGTGCCATCTAAATCAAAACGTTTTTCATCAGTAAAAACAGCAGAACGCCAATCATTAAAC---------------------CAAGTGTCAG-------ATTAAACASizeHit CountTotal NormTotal
No Reads
dm3
ACGTTTGGGTTCATTTTCGAGGTGACAAACTGGAGCTCGCAAGTTCCATAAAAAGATATGGCTCCCCACACCA-----------TTACACCACCTGCACAAGTGTGATGACGGCTTAAAAAACATTCTTCCTTTCTTATATCATGG-----AAATAATAGT----TATAGCCATCCGGTCCATCGAGGTTGAACTTCTTTTCATCGGAGAAAACCACCGTCTTCCACTCCTTGTTC---------------------CACGTCATGTGTTCTCAGGCAAA--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................TC---------------------CACGTCATGTGTTCTCAGGCAAA--2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TTACACCACCTGCACAAGTGTGATG.............................................................................................................................................................................2522.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AACTTCTTTTCATCGGAGAAAA.....................................................................2231.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TCCGGTCCATCGAGGTTGAACTTC.....................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GTCCATCGAGGTTGAACTTC.....................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GCCATCCGGTCCATCGAGGTTGAACT.......................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCGAGGTGACAAACTGGAGC......................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TCTTCCACTCCTTGTTC---------------------CACGT....................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TAATAGT----TATAGCCATCCGGT.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTCATTTTCGAGGTGACAAACTGGA........................................................................................................................................................................................................................................................2530.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TAAAAAACATTCTTCCTTTCTTATA..............................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGGTGACAAACTGGAGCTCGC..................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGACAAACTGGAGCTCGCAAGT..............................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CACCACCTGCACAAGTGTGATGACG..........................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GTTC---------------------CACGTCATGTGTTCTCT........2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CCATCCGGTCCATCGAGGTTGAAC........................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CATCCGGTCCATCGAGGTTGAACTTC.....................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CGGTCCATCGAGGTTGAACTTCTT...................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TACACCACCTGCACAAGTGTGATGACGGC........................................................................................................................................................................2920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CAAGTGTGATGACGGCTTAAAAAA................................................................................................................................................................2440.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CTTGTTC---------------------CACGTCATGTGTTC...........2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGCACAAGTGTGATGACGGT........................................................................................................................................................................2040.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CACTCCTTGTTC---------------------CACGTCATG................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................TCTTTTCATCGGAGAAAACCACCGTC.............................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCCATCGAGGTTGAACTTCTTTTCATC.............................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TAGCCATCCGGTCCATCGAGGTTG...........................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................CATCGAGGTTGAACTTCTTTTCATCGG...........................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTTTCATCGGAGAAAACCAC.................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CCATCCGGTCCATCGAGGTTG...........................................................................................2130.3310000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TCGAGGTTGAACTTCTTTTCATCGGA..........................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................GCTCCCCACACCA-----------TTACAC................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TCGAGGTTGAACTTCTTTTCATC.............................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CATCGAGGTTGAACTTCTTTTCA...............................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AACATTCTTCCTTTCTTA................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCTTTTCATCGGAGAAAACCAC.................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ATCCGGTCCATCGAGGTTGAA.........................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GAGAAAACCACCGTCTTCCAC.......................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTTTCGAGGTGACAAACTGGA........................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGCACAAGTGTGATGACGGCTTA.....................................................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGCACAAGTGTGATGACGGC........................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CAAGTGTGATGACGGCTTAAAA..................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCTCTCGCGTTCATGTTTGGTGCCAAAAACTGCAAATCACAGGGACCATATTTGGATATAACTCCCCATATCA-----------TGAGACCTCCAACCCGACTGTATAATCGGTCCAAAATGTGCTCC---TCACGAAAATCATGA-----TAGTAATGAC----TATATCCATCTGGTCCCTTCAGATTAAATTTCTTCTCGTCAGAAAATACGACATAATGCCACTCCTTAGAC---------------------CAGGTAATTCGTT--TG------GCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................TCCTTAGAC---------------------CAGGTAATTCGTT--TG------GC2612.00200000001001000000
....TCGCGTTCATGTTTGGTGCCAAAAAC............................................................................................................................................................................................................................................................2611.00100000010000000000
............................................................................................................................................................................................TTAAATTTCTTCTCGTCAGAAAATACGACA................................................................3011.00100000010000000000
..............................TGCAAATCACAGGGACCATATTTGGA..................................................................................................................................................................................................................................2611.00100000001000000000
...................................................................................................GACTGTATAATCGGTCCAAAATGTG..............................................................................................................................................................2511.00100000001000000000
.............................................................................................................................................................................................................................TGCCACTCCTTAGAC---------------------CAGGTAATTCGTT--..........2811.00100000010000000000
........................................................................................................TATAATCGGTCCAAAATGTGCT............................................................................................................................................................2211.00100100000000000000
......................................................................................................................................................................................TTCAGATTAAATTTCTTCTCGTCAGAAAAT......................................................................3011.00100000010000000000
..................................................................CATATCA-----------TGAGACCTCCAACCCG......................................................................................................................................................................................2311.00100100000000000000
..............................TGCAAATCACAGGGACCATATTTGGATA................................................................................................................................................................................................................................2811.00100000001000000000
.................................AAATCACAGGGACCA..........................................................................................................................................................................................................................................1520.50100000000001000000
...................................................................................................................................................................................................................TACGACATAATGCCACTCCTTAGA...............................................2440.25100000010000000000
droSec2
TCTTTCGCGTTCATTTTTGTCTTTA-AAACTGCAATTCACAGGGGCCATAATAGGATACTGCGCCCCATACTA-----------TGACACCTCCAAACCGACTGTGTAAGCGATCTAAAATGTGCTCCTCTTTACGCAAATCAAGA-----TAGTAATGACTACATATAGCCGTCTGGATCCTCTAGATAA-ATTTCTTCTCATCTGAAAATACGACATAATGCCACTCTTTAGAC---------------------CAGGTCATATAAGCTCAAGCAAAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TCTTTCGCGTTTATTTTTATTGTTAAATACTGCAATTCCCAGGGGCCATAATAGGATACTGCGCTCCATACCA-----------TCACACCTCCAACCCGACTGTGTAAGCGATCCAAAATGTGC-----TTTACGCAAATCATGA-----TAGTAATTAA----TATAGCC----------TCCAGATTAAATTTCTTCTCGTCCGTAAATACGAC-----------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GCAATGACATTCATACGGCTGGTAAAAAACTGCAGTTCTATAGTGCCAAAGTATGCTATAGCTCCCCACACCA-----------TGACACCACCCGCACGGTTGTGCAATCGATCAAAAGTATGTTCTTCCTTTCTGAGACCATGA-----AAGTAGTGGG----CATAGCCGTCAGGACCCTCCAAATTAAACTCATTTTCATCTGAAAAGACTACACGCTCCCACTCCTTAGTC---------------------CATGTCATATTTGATCGACAAAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:34 PM