ID:

dmo_54

 Coordinate:

scaffold_6473:7790781-7790843 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.4 -34.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GGACGGGACGGGGCCGGACGGGGCGGGACGGGACATGGCCAGCGTATCGTTTTAGAATTCCTACGCTTTACCGTCGTATACGCAATTTGGCAAAGCGTTTGGATTCTGAAACAATATATGGTCAAAAGCATCAGCGGATGAGTTATTTGTAATAAATAGCAAG

***********************************((((((..((((.((((((((((((..(((((((.(((..............))).)))))))..)))))))))))).)))).))))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 M046

female body

 V056

head

 V049

head

 V110

male body		 V041

embryo
..................................................TTTAGAATTCCTACGCTTTACC........................................................................................... 22 0 1 4709.00 4709 2896 1094 392 219 56 52
..........................................................................................CAAAGCGTTTGGATTCTGAAAC................................................... 22 0 1 752.00 752 482 61 105 48 48 8
..................................................TGTAGAATTCCTACGCTTTACC........................................................................................... 22 1 1 425.00 425 424 0 0 0 0 1
..................................................TTTAGAATTCCTACGCTTTAC............................................................................................ 21 0 1 321.00 321 157 87 41 28 5 3
...................................................TTAGAATTCCTACGCTTTACC........................................................................................... 21 0 1 143.00 143 31 111 0 0 1 0
..........................................................................................CAAAGCGTTTGGATTCTGAAA.................................................... 21 0 1 74.00 74 8 6 40 12 6 2
..................................................TTCAGAATTCCTACGCTTTACC........................................................................................... 22 1 1 73.00 73 72 1 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTA............................................................................................. 20 0 1 31.00 31 5 8 12 5 1 0
.................................................CTTTAGAATTCCTACGCTTTACC........................................................................................... 23 1 1 26.00 26 23 1 2 0 0 0
..........................................................................................CAATGCGTTTGGATTCTGAAAC................................................... 22 1 1 24.00 24 24 0 0 0 0 0
..................................................TGTAGAATTCCTACGCTTTAC............................................................................................ 21 1 1 22.00 22 22 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTGCC........................................................................................... 22 1 1 17.00 17 3 7 4 1 1 1
..........................................................................................CAAAGCGTTTGGATTCTGAAACA.................................................. 23 0 1 15.00 15 0 1 6 1 7 0
..................................................TTTTGAATTCCTACGCTTTACC........................................................................................... 22 1 1 15.00 15 15 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTGA...................................................... 19 0 1 14.00 14 2 2 3 2 5 0
..................................................TTTAGAATTCCTACGCTTTACCG.......................................................................................... 23 0 1 14.00 14 8 6 0 0 0 0
..........................................................................................CGAAGCGTTTGGATTCTGAAAC................................................... 22 1 1 13.00 13 12 0 1 0 0 0
..................................................CTTAGAATTCCTACGCTTTACC........................................................................................... 22 1 1 12.00 12 12 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTGAA..................................................... 20 0 1 12.00 12 1 3 2 1 5 0
...................................................TTAGAATTCCTACGCTTTAC............................................................................................ 20 0 1 12.00 12 2 10 0 0 0 0
..................................................TTTAGAATTCATACGCTTTACC........................................................................................... 22 1 1 12.00 12 11 1 0 0 0 0
..................................................TGTTGAATTCCTACGCTTTACC........................................................................................... 22 2 1 11.00 11 11 0 0 0 0 0
..................................................GTTAGAATTCCTACGCTTTACC........................................................................................... 22 1 1 11.00 11 10 0 1 0 0 0
..................................................TTTAGAATTCCTACGCTTTACA........................................................................................... 22 1 1 10.00 10 7 0 3 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTGAAACT.................................................. 23 1 1 10.00 10 1 0 6 3 0 0
..................................................TGCAGAATTCCTACGCTTTACC........................................................................................... 22 2 1 10.00 10 10 0 0 0 0 0
..................................................TTTAGGATTCCTACGCTTTACC........................................................................................... 22 1 1 10.00 10 8 0 1 1 0 0
..........................................................................................CAAAGCGTTTGGATTCTGGAAC................................................... 22 1 1 9.00 9 1 0 0 8 0 0
....................................................TAGAATTCCTACGCTTTACC........................................................................................... 20 0 1 8.00 8 4 4 0 0 0 0
..................................................TTTAGAATTCCTACCCTTTACC........................................................................................... 22 1 1 8.00 8 8 0 0 0 0 0
..................................................TTTAGAATTCCTCCGCTTTACC........................................................................................... 22 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................AAAGCGTTTGGATTCTGAAAC................................................... 21 0 1 8.00 8 1 7 0 0 0 0
..................................................TTTAGAATTCCTACGTTTTACC........................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0
..................................................TCTAGAATTCCTACGCTTTACC........................................................................................... 22 1 1 7.00 7 6 0 0 1 0 0
..................................................TTTAGAATTCCTACGCTTT.............................................................................................. 19 0 1 7.00 7 1 1 4 1 0 0
..................................................TTTAGAATTCCGACGCTTTACC........................................................................................... 22 1 1 6.00 6 0 6 0 0 0 0
..................................................TTTAGAGTTCCTACGCTTTACC........................................................................................... 22 1 1 6.00 6 3 1 1 1 0 0
..................................................TTTAGAATTCCCACGCTTTACC........................................................................................... 22 1 1 6.00 6 4 1 0 1 0 0
..................................................ATTAGAATTCCTACGCTTTACC........................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
...................................................TGAGAATTCCTACGCTTTACC........................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
..................................................TTTAGAATTCCTACGCCTTACC........................................................................................... 22 1 1 5.00 5 2 0 0 2 0 1
..................................................TTTAGAATTCCTACGCTTTACCC.......................................................................................... 23 1 1 5.00 5 1 3 1 0 0 0
.................................................CGTTAGAATTCCTACGCTTTACC........................................................................................... 23 2 1 5.00 5 5 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTGAAACC.................................................. 23 1 1 5.00 5 4 0 1 0 0 0
..................................................TTTAGAATTCCTACGCTTTCCC........................................................................................... 22 1 1 5.00 5 0 1 1 3 0 0
..........................................................................................CTAAGCGTTTGGATTCTGAAAC................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTAGC........................................................................................... 22 1 1 4.00 4 2 0 1 1 0 0
..................................................TTTAGAATTCGTACGCTTTACC........................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0
..........................................................................................CAAAGCGTTTGCATTCTGAAAC................................................... 22 1 1 4.00 4 3 0 1 0 0 0
..................................................TTTAGAATTCCTACTCTTTACC........................................................................................... 22 1 1 4.00 4 1 0 2 1 0 0
..................................................TTTAGAATTCCTATGCTTTACC........................................................................................... 22 1 1 4.00 4 2 0 1 1 0 0
..................................................TTTAGAATTCCTACACTTTACC........................................................................................... 22 1 1 4.00 4 2 0 1 1 0 0
..................................................TTTAGAATTCCTACCCTTTAC............................................................................................ 21 1 1 3.00 3 2 0 1 0 0 0
..................................................TTTAGAACTCCTACGCTTTACC........................................................................................... 22 1 1 3.00 3 2 0 0 1 0 0
...............................................ATCTTTAGAATTCCTACGCTTTACC........................................................................................... 25 3 1 3.00 3 3 0 0 0 0 0
..................................................TTTAAAATTCCTACGCTTTACC........................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................CAAAGCTTTTGGATTCTGAAAC................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTTAAAC................................................... 22 1 1 3.00 3 1 0 0 2 0 0
..................................................TTTAGAATTCCTACGCTTTACCA.......................................................................................... 23 1 1 3.00 3 0 1 2 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTGAAAA................................................... 22 1 1 3.00 3 1 0 0 0 2 0
.................................................CTTTAGAATTCCTACGCTTTAC............................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
..................................................TGTAGAATTCCTACGTTTTACC........................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTATC........................................................................................... 22 1 1 3.00 3 0 0 1 2 0 0
..................................................TTTAGAATTCCTAAGCTTTACC........................................................................................... 22 1 1 3.00 3 0 0 1 2 0 0
................................................TCTTTAGAATTCCTACGCTTTACC........................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
.................................................ATTTAGAATTCCTACGCTTTACC........................................................................................... 23 1 1 3.00 3 1 1 1 0 0 0
..................................................TTCAGAATTCCTCCGCTTTACC........................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TAAAGCGTTTGGATTCTGAAAC................................................... 22 1 1 3.00 3 2 0 1 0 0 0
.........................................................................................GCAAAGCGTTTGGATTCTGAAA.................................................... 22 0 1 3.00 3 0 0 2 0 1 0
..................................................TTTAGAATTCCTACGCCTTAC............................................................................................ 21 1 1 2.00 2 0 0 1 0 0 1
.....................................................AGAATTCCTACGCTTTACC........................................................................................... 19 0 1 2.00 2 1 1 0 0 0 0
..................................................TTTAGAATTCCTACGCT................................................................................................ 17 0 1 2.00 2 0 0 2 0 0 0
..................................................TTTAGAATTCCTACGCTTACC............................................................................................ 21 2 1 2.00 2 2 0 0 0 0 0
..................................................TGTAGAATTCCTCCCCTTTACC........................................................................................... 22 3 1 2.00 2 2 0 0 0 0 0
..................................................TTTACAATTCCTACGCTTTACC........................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
..................................................TTTAGAATTGCTACGCTTTACC........................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTTCC........................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
..................................................TGTAGAATTCCTCCGCTTTACC........................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................CAAATCGTTTGGATTCTGAAAC................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TTCAGAATTCCTACGCTTTAC............................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................CAGAGCGTTTGGATTCTGAAAC................................................... 22 1 1 2.00 2 0 0 1 1 0 0
..................................................TGTATAATTCCTACGCTTTACC........................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
.................................................CTTCAGAATTCCTACGCTTTACC........................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................AAGCGTTTGGATTCTGAAAC................................................... 20 0 1 2.00 2 1 1 0 0 0 0
..................................................CTTAGAATTCCTACGCTTTAC............................................................................................ 21 1 1 2.00 2 1 0 1 0 0 0
..................................................TTTAGAAGTCCTACGCTTTACC........................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0
..................................................TTGAGAATTCCTACGCTTTACC........................................................................................... 22 1 1 2.00 2 0 1 0 1 0 0
........................................................................GTCGTATACGCAATTTGG......................................................................... 18 0 1 2.00 2 2 0 0 0 0 0
..................................................TTTAGAATTCCTACGATTTACC........................................................................................... 22 1 1 2.00 2 0 0 0 1 0 1
..................................................TTTAGAATTCCAACGCTTTACC........................................................................................... 22 1 1 2.00 2 0 1 1 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTGAAAT................................................... 22 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................CAAAGCGTTTGGCTTCTGAAAA................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGTTTCTGAAAC................................................... 22 1 1 2.00 2 0 0 1 1 0 0
..................................................TTTGGAATTCCTACGCTTTACC........................................................................................... 22 1 1 2.00 2 0 0 0 0 0 2
..................................................TTTAGAATTCCTGCGCTTTACC........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...................................................TTAGAATTCCTACGCTTTA............................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0
..................................................TGTAGAATTCCTACGCTTTACA........................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGACTCTGAAAC................................................... 22 1 1 2.00 2 0 0 2 0 0 0
..................................................TTTAGCATTCCTACGCTTTACC........................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0
.................................................TTTTAGAATTCCTACGCTTTACC........................................................................................... 23 0 1 2.00 2 0 1 1 0 0 0
.................................................CATTAGAATTCCTACGCTTTACC........................................................................................... 23 2 1 2.00 2 1 0 1 0 0 0
..........................................................................................CAAAGCGTTTGGATTTTGAAAC................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................CAATGCGTTTGGATTCTGAAA.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TTTTGAATTCCTACGCTTTAC............................................................................................ 21 1 1 2.00 2 1 0 0 1 0 0
..........................................................................................CAAAGCGTTTGGATCCTGAAAC................................................... 22 1 1 2.00 2 0 0 2 0 0 0
..................................................TTTAGAATCCCTACGCTTTACC........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTGAAGC................................................... 22 1 1 2.00 2 1 0 1 0 0 0
................................................TCTTTAGAATTCCTACGCTTTAC............................................................................................ 23 2 1 2.00 2 2 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTCACC........................................................................................... 22 1 1 2.00 2 0 1 1 0 0 0
..................................................TGGAGAATTCCTACGCTTTACC........................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
..................................................TTTAGAAGTCCGACGCTTTACC........................................................................................... 22 2 1 2.00 2 0 0 1 1 0 0
..................................................TATAGAATTCCTACGCTTTACC........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGCTTCTGAAAC................................................... 22 1 1 2.00 2 1 0 1 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTGTAAC................................................... 22 1 1 2.00 2 1 0 0 1 0 0
..........................................................................................CAAAGCGTCTGGATTCTGAAAC................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTGTGGATTCTGAAAC................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................ACAAAGCGTTTGGATTCTGAAA.................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCTCCACTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTATACC........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...................................................TTAGAATTCCTACGCTTTACCGGCC....................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGAATTCCTACACTGTAC............................................................................................ 21 2 1 1.00 1 0 0 0 1 0 0
..........................................................................................CAAAGCGTTTGGATTCTAAAAC................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TGTAGAATTCCTACGCTTTACT........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCATACCCTTTACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAAAGCGTTTGGATTATGAAA.................................................... 21 2 1 1.00 1 0 0 1 0 0 0
...............................................TGATTTAGAATTCCTACTCTTTACC........................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGATTTCCTACGCTTTACC........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.................................................GTTTAGAATTCGTACGCTTTACC........................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
....................................................TAGAATTCCTACGCTTTACA........................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTACTCTTT.............................................................................................. 19 1 1 1.00 1 0 0 0 1 0 0
................................................ACTTTAGAATTCCTACGCTTTACC........................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
......................................................GAATTCCTACGCTTTACC........................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
..................................................TGGAGAATTCCTTCGCTTTACC........................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTACGCTTGACC........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGCATTCCTACGCTTTCC............................................................................................ 21 2 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTACGCTGTACT........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.................................................CTTTTGAATTCCTAAGCTTTACC........................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGACTTCCTACGCTTTACC........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGTATTCCTACGCTTTAC............................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0
..................................................CTTAGAATTCCTACGCTTTACCG.......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TAAAGCGTTTGGATTCTGAA..................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTATAATTCCTACGCTTTACC........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTCGAATTCCTGCGCTTTACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGGAATTCCTACGCTTTAC............................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0
..........................................................................................CAACGCGTTTGGATTCTGA...................................................... 19 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTACGCTT............................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
..................................................TGTAGAATGCCGACGCTTTACC........................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
...........................................................................................AAAGCGTTTGGATTCTGAAACC.................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................CAAAGCGGTCGGATTCTGA...................................................... 19 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCTACGCTTTACCTTGG....................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGAATTCATACTCTTTAC............................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCTACACCTTACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TGTAGAGTTCCTACGCTTTAC............................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTACCGGA........................................................................................ 25 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTTCGCTTTACC........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................CCCAGCGTTTGTATTCTGAAA.................................................... 21 3 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCTACGTTTTAC............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTG....................................................... 18 0 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGTATTCCTACGCTTTACC........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................CTTTAGAATTCCCACGCTTTACC........................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TTCAGAATTTCTACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TGTAGGATTCCTACGCTTTACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................CAACGCGTTTGTATTCTGCAAC................................................... 22 3 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCTACGCTCTACC........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAGAGCGTTTGGATTCTGAA..................................................... 20 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTAAAATTCATACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TGTAGAATTTCTACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGCATTCCTACGATTTACC........................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..........................................................................................CAAAGAGTTTGGATTCTGAAAC................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................TGTAGAATGCCTACGCTTTTCC........................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................CAAAGCGTTTGGATTCAGAAAC................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..........................................................................................GAAAGCGTTTGGATTCTGAAA.................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTCAGAATTCATACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTAAGCTTTTCC........................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TGTAGAATTCCTACCCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................CGTAGAATTCCTACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.................................................GTTTAGAATTCCTACGCTTTGCC........................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
.................................................TTTTAGCATTCGTACGCTTTACC........................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................CAAAGCGTTTGGGTTCTGAAAC................................................... 22 1 1 1.00 1 0 0 0 1 0 0
....................................................TGGAATTCCTACGCTTTACC........................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...................................................TGAGAATTCCAACGCTTTACC........................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTTAGATTCTGAAAC................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTCCGCGTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...............................................AATTTTAGAATACCTACGCTTTAC............................................................................................ 24 3 1 1.00 1 0 1 0 0 0 0
..............................................CCCGTTTAGAATTCCTACGCTTTACC........................................................................................... 26 3 1 1.00 1 0 1 0 0 0 0
..................................................TTGAGAATGCCTACGCTTTACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCTACTCTTTACCC.......................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
..................................................ATTATAATTCCTACGCTTTAC............................................................................................ 21 2 1 1.00 1 0 0 0 1 0 0
.................................................TTTTAGAATTCCTACGCTTTAC............................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
..............................................TCGTTTTAGAATTCCTACGCTTTAC............................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGAATTCCTACGCTTAACC........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................CTCTAGAATTCCTACGCTTTACC........................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTACCT.......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
....................................................TAGAATTCCTACGCTTTAC............................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTTGAATTCTGAAAC................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTACT........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................GCAAAGCGTTTGGATTCTGAAAC................................................... 23 0 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGAATGCATACGCTTTACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCGACGATTTACC........................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.................................................CTTTAGAATTCCCACGCTTTAC............................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTACCGTCGTA..................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCTACTCTCTACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TGTAGAATTCATACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................GCAAAGCGTTTGGATTCTGA...................................................... 20 0 1 1.00 1 0 0 0 1 0 0
............................................................................................AAGCGTTTGGATTCTGAAA.................................................... 19 0 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGAAGTCCTACACTTGACC........................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAAACCGTTTGGATTCTGAAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATGCCTACGCTTGACC........................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGCATTCCTACGCTTTCCC........................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TGCAGAATTCCTACGCTTTAC............................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAGAGCGTTTGGATTCTGA...................................................... 19 1 1 1.00 1 0 0 0 1 0 0
..................................................TTCAGTATTCCTACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGCTTGGATTCTGAAA.................................................... 21 1 1 1.00 1 0 0 1 0 0 0
...................................................TTAGAATTCCTCCGCTTTACC........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGAAGTCCTAAGCTTTACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTACTACGCTTTACC........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTACGCTGTACC........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTAAAC.................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................CCAAAGCGTTTGGATTCTGAAAC................................................... 23 1 1 1.00 1 0 0 0 0 1 0
..........................................................................................CAAAGCGGTTGGATTCTGAAAC................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.................................................GTTTAGAATTCCTACGCTTTACC........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTT............................................................................................. 20 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTACGCGTTACC........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCAGAATTCCCACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TGTAGAATTCCTACGCTTGACC........................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTACTCTTTAC............................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGTATTCCTCCGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTGAGAATGCCTACGCTTTAC............................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCATACGCGTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................GTTAGAATTCCTACGCTTTACT........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTACCGT......................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................TGAAGCGTTTGGATTCTGAAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTTGTATTCTGAAAC................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCAGAATTCCTACGCTTGACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGCTTCTGAAA.................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.................................................CTCTAGAATTCCTACGCCTTACC........................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0
..................................................TTGAGAATTCCTACGCTTGACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTACAATTCCTACGCTTTCCC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................CAAAGCGTTTGGATTCTCAAAAC.................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAATGCTTTTGGATTCTGAAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTGGACTTCCTACGATTTACC........................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
..................................................TTTAGAATTCCTACGCTTTGC............................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
...................................................TTAGAATTCCTGCGCTTTAC............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTAGAATTCCCACGCTTTAC............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TGTAGAATTACTACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAGAGCGTTTGGATTCTGAAA.................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTCAGAATCCCTACGCTTTACC........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAACGCATTTGGATTCTGAAAC................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................CAAAGCGATTGGATTCTGAAAC................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTCGGATTCTGCACC................................................... 22 3 1 1.00 1 0 0 0 1 0 0
..........................................................................................TAAAGCTTTTGGATTCTGAAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTTGGCTTCTTTAAC................................................... 22 3 1 1.00 1 0 0 0 1 0 0
..................................................ATTAGAATTCCTACGCTTTAC............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CAAAGCGTTTTGATTCTGAAAC................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTAGAATTACTACGCTTGACC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.................................................CGCTAGAATTCCTACGCTTTACC........................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0
..................................................TGTTGAATTCCTACGCTTTAC............................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TGTAGAATTCCTACGCTCCACC........................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0
..................................................TTTCGCACTCCTACGCTTTACC........................................................................................... 22 3 2 0.50 1 0 0 1 0 0 0
..........................................................................................CAAAGCGTTTAGATTCTGAAACT.................................................. 23 2 2 0.50 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTCCGCTTTACA........................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTAAA........................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTTCGCTTTATC........................................................................................... 22 2 2 0.50 1 0 0 0 1 0 0
..................................................TTTAGAATTCCTCCGCTTAACA........................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0
..................................................TTTAGAATTCCTACGCTTTATT........................................................................................... 22 2 2 0.50 1 0 0 0 1 0 0
..........................................................................................CAAAGCGTTCGGTTTCTGAAA.................................................... 21 2 2 0.50 1 0 0 1 0 0 0
..................................................TTTAGGATTCCTTCGCTTTATC........................................................................................... 22 3 3 0.33 1 0 0 0 1 0 0
..................................................TTTCGAATTCCTCCGCTTTACA........................................................................................... 22 3 3 0.33 1 0 0 1 0 0 0
..................................................TGTAGAATTCCTACGCTTTAAA........................................................................................... 22 3 4 0.25 1 1 0 0 0 0 0
..................................................TTTAGAATTACTACGCTTAACA........................................................................................... 22 3 4 0.25 1 0 0 0 1 0 0
..........................................................................................CAAAGCGTTTGGGTTCTAAC..................................................... 20 3 4 0.25 1 0 0 0 0 1 0
..................................................TGTAAAATTCCTAAGCTTTACC........................................................................................... 22 3 5 0.20 1 0 0 1 0 0 0
.............................................ATCGATATAGAGTTCCTACG.................................................................................................. 20 3 5 0.20 1 1 0 0 0 0 0
.............................................AGCGTTATAGAGTTCCTACG.................................................................................................. 20 3 5 0.20 1 0 0 0 0 1 0
.................................................................................................................................GTCAGCGGATGCGTTATT................ 18 2 5 0.20 1 0 1 0 0 0 0
..................................................TTTAGAATTTTTAAGCTTTACC........................................................................................... 22 3 7 0.14 1 0 0 0 1 0 0
..........GGGACGGTCGGGGGGGGAC...................................................................................................................................... 19 3 11 0.09 1 0 1 0 0 0 0

Anti-sense strand reads

CCTGCCCTGCCCCGGCCTGCCCCGCCCTGCCCTGTACCGGTCGCATAGCAAAATCTTAAGGATGCGAAATGGCAGCATATGCGTTAAACCGTTTCGCAAACCTAAGACTTTGTTATATACCAGTTTTCGTAGTCGCCTACTCAATAAACATTATTTATCGTTC

************************************((((((..((((.((((((((((((..(((((((.(((..............))).)))))))..)))))))))))).)))).))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body
...TCCCAGGCCCGGCCTGCCCCG........................................................................................................................................... 21 3 4 0.25 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6473:7790731-7790893 - dmo_54 confident GGACGGGACGGGGCCGGACGGGGCGGGACGGGACATGGCCAGCGTATCGTTTTAGAATTCCTACGCTTTACCGTCGTA-TACGCAATTTGGCAAAGCGTTTGGATTCTGAAACAATATATGGTCAAAAGCATCAGCGGATGAGTTATTTGTAATAAATAGCAAG
droVir3 scaffold_12970:3343525-3343623 - dvi-mir-927 Known_mirbase A----------------------------------TGTCCATCGTATCGTTTTAGAATTCCTACGCTTTACCGTCGTG-TCCGAAATTTGGCAAAGCGTTTGGATTCTGAAACGATATATGGTCGGTAACAACA------------------------------
droGri2 scaffold_15203:10526919-10527035 + dgr_21 confident ---C------------------------------GTGACTATTGTATTGTTTTAGAATTCCTACGCTTTACCGTCGTA-TACGAAATTTGGCAAAGCGTTTGGATTCTGAAACGGTATGTGGTCAGAAACAACAATCGGAAGTTTAGTTGT-------------
droWil2 scf2_1100000004590:2521621-2521694 - dwi_12 confident -------------------------------------------GTAGCGTTTTAGAATTCCTACGCTTTACCGTCGCC-TACGAAACTCGGCAAAGCGTTTGGATTCTGAAACATTAT----------------------------------------------
dp5 Unknown_group_79:17448-17533 + dps-mir-927 Known_mirbase A--C------------------------------GAGGATATTGTAGTGTTTTAGAATTCCTACGCTTTACCGTTGCAAAACGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTAT----------------------------------------------
droPer2 scaffold_192:48575-48660 + dpe_29 confident A--C------------------------------GAGGATATTGTAGTGTTTTAGAATTCCTACGCTTTACCGTTGCAAAACGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTAT----------------------------------------------
droAna3 scaffold_13250:3108684-3108759 + dan_16 confident ------------------------------------------------GTTTTAGAATTCCTACGCTTTACCGTTGCA-TATGAAATTAGGCAAAGCGTTTGGATTCTGGAACCCTATGTATTCA---------------------------------------
droBip1 scf7180000393580:5807-5902 - A--CCAGAAA-------------------------AGGGTATTGTGGAGTTTTAGAATTCCTACGCTTTACCGTTGC--TATGATATTTGGCAAAGCGTTTGGATTCTGGAACCCTACGTATTCA---------------------------------------
droKik1 scf7180000302230:275972-276076 - GGGCAAGTCT-------------------------GGGGCGTTGTAGGGCTTTAGAATTCCTACGCTTTACCGTGGCA-TTCGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTATGCGTCCGTGAGTA---------------------------------
droFic1 scf7180000454038:1133663-1133739 - -----------------------------------TGGGTATTGTAGAGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------
droEle1 scf7180000491044:230814-230890 + -----------------------------------TGGATATTGTAGGGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------
droRho1 scf7180000777033:165079-165155 + -----------------------------------TGGATATTGTAGGGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------
droBia1 scf7180000302126:1157228-1157296 + -------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------
droTak1 scf7180000415169:54724-54792 + -------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------
droEug1 scf7180000409111:14101-14169 + -------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAAGTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------
dm3 chrX:15859995-15860071 - dme-mir-927 Known_mirbase -----------------------------------TGGTTGCTGTAGAGTTTTAGAATTCCTACGCTTTACCGTGGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------
droSim2 x:15031343-15031416 - dsi-mir-927 Known_mirbase -------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTGGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTAT----------------------------------------------
droSec2 scaffold_37:439560-439633 - dse_27 confident -------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTCGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTAT----------------------------------------------
droYak3 X:10049126-10049202 - -----------------------------------TGGGCGCTGTAGAGTTTTAGAATTCCTACGCTTTACCGTCGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------
droEre2 scaffold_4690:11188782-11188845 + ------------------------------------------------GTTTTAGAATTCCTACGCTTTACCGTGGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGACGGGACGGGGCCGGACGGGGCGGGACGGGACATGGCCAGCGTATCGTTTTAGAATTCCTACGCTTTACCGTCGTA-TACGCAATTTGGCAAAGCGTTTGGATTCTGAAACAATATATGGTCAAAAGCATCAGCGGATGAGTTATTTGTAATAAATAGCAAGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................2214709.004709109452219392289656
...........................................................................................CAAAGCGTTTGGATTCTGAAAC...................................................221752.007526184810548248
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................211321.0032187328411575
...................................................TTAGAATTCCTACGCTTTACC............................................................................................211143.00143111000311
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................21174.007462124086
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................20131.00318051251
...........................................................................................CAAAGCGTTTGGATTCTGAAACA..................................................23115.0015101607
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................19114.0014202325
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................23114.0014600080
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................20112.0012301215
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................20112.00121000020
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................22110.0010000370
...........................................................................................CAAAGCGTTTGGATTCTGAAACT..................................................23110.0010003610
....................................................TAGAATTCCTACGCTTTACC............................................................................................2018.008400040
............................................................................................AAAGCGTTTGGATTCTGAAAC...................................................2118.008700010
..................................................TTTAGAATTCCTACGCTTT...............................................................................................1917.007101410
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................2315.005300110
...........................................................................................CAAAGCGTTTGGATTCTGAAACC..................................................2315.005000140
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................2313.003100200
...........................................................................................CAAAGCGTTTGGATTCTGAAAA...................................................2213.003000012
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................2213.003000201
.....................................................AGAATTCCTACGCTTTACC............................................................................................1912.002100010
..................................................TTTAGAATTCCTACGCT.................................................................................................1712.002000200
.............................................................................................AAGCGTTTGGATTCTGAAAC...................................................2012.002100010
........................................................................GTCGTA-TACGCAATTTGG.........................................................................1812.002000020
...........................................................................................CAAAGCGTTTGGATTCTGAAAT...................................................2212.002000200
...................................................TTAGAATTCCTACGCTTTA..............................................................................................1912.002200000
.................................................TTTTAGAATTCCTACGCTTTACC............................................................................................2312.002100100
....................................................TAGAATTCCTACGCTTTACA............................................................................................2011.001000010
......................................................GAATTCCTACGCTTTACC............................................................................................1811.001000010
..................................................TTTAGAATTCCTACGCTT................................................................................................1811.001000100
............................................................................................AAAGCGTTTGGATTCTGAAACC..................................................2211.001100000
..................................................TTTAGAATTCCTACGCTTTACCGGA.........................................................................................2511.001000010
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................1811.001000100
.................................................TTTTAGAATTCCTACGCTTTAC.............................................................................................2211.001000010
..............................................TCGTTTTAGAATTCCTACGCTTTAC.............................................................................................2511.001100000
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................2311.001100000
....................................................TAGAATTCCTACGCTTTAC.............................................................................................1911.001000010
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................2211.001000010
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC...................................................2311.001001000
..................................................TTTAGAATTCCTACGCTTTACCGTCGTA-.....................................................................................2811.001000100
..........................................................................................GCAAAGCGTTTGGATTCTGA......................................................2011.001001000
.............................................................................................AAGCGTTTGGATTCTGAAA....................................................1911.001100000
..................................................TTTAGAATTCCTACGCTTTT..............................................................................................2011.001001000
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................2411.001000100
..................................................TTTAGAATTCCTACGCTTTAAA............................................................................................2220.501000010
..................................................TTTAGAATTCCTACGCTTTATT............................................................................................2220.501001000
droVir3
A----------------------------------TGTCCATCGTATCGTTTTAGAATTCCTACGCTTTACCGTCGTG-TCCGAAATTTGGCAAAGCGTTTGGATTCTGAAACGATATATGGTCGGTAACAACA------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................2219222.0092227343352695720000000000420192108241287167045324600020741401000100712181100170122132020466448112874000272415491685455641117124
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................2111314.0013145464432110000000007649245377430864400002402200001000260000000000000231171319110044240500114931826
...........................................................................................CAAAGCGTTTGGATTCTGAAAC...................................................221676.006768423137000000000009327104111140000020000000000000111000000000001546626500010042000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................211577.00577184703101000000006905430810000002100000000000000000000000001122018300000104003000001
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................201104.001040182200000000007349950155000002000000000000000000000000000010009100000001000011000
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................20169.006914920000000000030102200000000100000000000000000000000000000008000000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACT..................................................23167.006705910000000000012001000100000000000000000000000000000000000002000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................23155.00553930000000000090123307200000000000000000000000000000000005203000001000000000101
..................................................TTTAGAATTCCTACGCTTT...............................................................................................19147.004713110000000000000200103000000000100000000000000000000000004002000000000000000001
...................................................TTAGAATTCCTACGCTTTACC............................................................................................21138.003800293000000000011011000100000000000000000000000000000000000001000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................23132.003202600000000000020100001000000000000000000000000000000000001000000000000000000010
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................19124.002401800000000000020000000100000000000000000000000000000000000002100000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACC..................................................23118.001801401000000000000000000100000000000000000000000000000000000101000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................23117.00170100000000000000113100000000000000000000000000000000000000002000010300001001002
...........................................................................................CAAAGCGTTTGGATTCTGAAACA..................................................23116.00161800000000000010111000000000000000000000000000000000000000002100000000000000000
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................22114.00140420000000000000010001000000000000000000000000000000000001000000001000000001021
...........................................................................................CAAAGCGTTTGGATTCTT.......................................................18114.001401400000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTT................................................................................................18112.001201100000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................2318.0080311000000000000000000000000000000000000000000000000000000100000000000002000000
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................2117.0071500000000000000000000000000000000000000000000000000000000010000000000000000000
....................................................TAGAATTCCTACGCTTTACC............................................................................................2016.0060122000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAA...................................................2216.0061400000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................AAAGCGTTTGGATTCTGAAAC...................................................2115.0050401000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GTCGTG-TCCGAAATTTGG.........................................................................1815.0050202000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................2015.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................1815.0050110000000000000000100000000000000000000000000000000000000001000000000000000001
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................2114.0040200000000000000000100000000000000000000000000000000000000000000000000000000010
...........................................................................................CAAAGCGTTTGGATTCTGG......................................................1913.0031200000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................2213.0030100000000000000001000000000000000000000000000000000000000010000000000000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................2213.0030100000000000000010000000000000000000000000000000000000000000000000001000000000
.............................................................................................AAGCGTTTGGATTCTGAAAC...................................................2013.0030300000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................2213.0030000000000000010000000000000000000000000000000000000000000110000000000000000000
............................................................................................AAAGCGTTTGGATTCTGAAA....................................................2012.0021000000000000010000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAT.....................................................2012.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAC.....................................................2012.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGC..................................................................................................1612.0020000000000000000000000000000000000000000000000000000000002000000000000000000000
.....................................................AGAATTCCTACGCTTTACC............................................................................................1912.0020110000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTT..............................................................................................2012.0020100000000000000000001000000000000000000000000000000000000000000000000000000000
.................................................TTTTAGAATTCCTACGCTTTACC............................................................................................2312.0020000000000000000000000000000000000000000000001000000000000100000000000000000000
.................................................TTTTAGAATTCCTACGCTTTAC.............................................................................................2211.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTA...............................................................................................1911.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAG.....................................................2111.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAG....................................................2211.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACTT.................................................2411.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCAA..........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................TTTAGAATTCCTACGCTTTACCGTAA........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001
...........................................................................................CAAAGCGTTTGGATTCTGAAACG..................................................2311.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTAG.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................AAAGCGTTTGGATTCTGAAACT..................................................2211.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................TTTAGAATTCCTACGCTTTAAA............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCGTT.........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................TTAGAATTCCTACGCTTTACCT...........................................................................................2211.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAC....................................................2111.0010000000000000001000000000000000000000000000000000000000000000000000000000000000
.....................................................................................ATTTGGCAAAGCGTTTGGATTC.........................................................2211.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AAAGCGTTTGGATTCTGAA.....................................................1911.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTG..............................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGT..................................................................................................1620.5010000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................TTTAGAATTCCTACGCTTC...............................................................................................1920.5010100000000000000000000000000000000000000000000000000000000000000000000000000000
droGri2
---C------------------------------GTGACTATTGTATTGTTTTAGAATTCCTACGCTTTACCGTCGTA-TACGAAATTTGGCAAAGCGTTTGGATTCTGAAACGGTATGTGGTCAGAAACAACAATCGGAAGTTTAGTTGT-------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................221137.001371334
...........................................................................................CAAAGCGTTTGGATTCTGAAAC...................................................22132.00322111
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................21112.0012111
...................................................TTAGAATTCCTACGCTTTACC............................................................................................21110.0010100
............................................................................................AAAGCGTTTGGATTCTGAAAC...................................................2112.00220
....................................................TAGAATTCCTACGCTTTACC............................................................................................2012.00220
...........................................................................................CAAAGCGTTTGGATTCTGAAAG...................................................2211.00101
.................................................TTTTAGAATTCCTACGCTTTACC............................................................................................2311.00110
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................2011.00110
........................................................................GTCGTA-TACGAAATTTGG.........................................................................1811.00110
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................2311.00110
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................2011.00110
..................................................TTTAGAATTCCTACGCTT................................................................................................1811.00110
droWil2
-------------------------------------------GTAGCGTTTTAGAATTCCTACGCTTTACCGTCGCC-TACGAAACTCGGCAAAGCGTTTGGATTCTGAAACATTAT----------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................22161392.006139252811702217397119
...........................................................................................CAAAGCGTTTGGATTCTGAAAC...................................................2217241.00724158937356371848
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................2116195.006195544482124644
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................2113375.0033753209111330112
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................2313240.00324020196731191032
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................221698.0069867500320
...........................................................................................CAAAGCGTTTGGATTCTGAAACT..................................................231572.0057251822545
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC...................................................231565.00565441425068
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................201333.0033327914742
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................231312.003123041016
...........................................................................................CAAAGCGTTTGGATTCTGAAACC..................................................231228.0022819140429
...........................................................................................CAAAGCGTTTGGATTCTGAAACA..................................................231172.0017276162069
.................................................TTTTAGAATTCCTACGCTTTACC............................................................................................231115.001151054006
...................................................TTAGAATTCCTACGCTTTACC............................................................................................211113.0011335610215
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................20195.00956050327
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................19192.00926812318
.................................................TTTTAGAATTCCTACGCTTTAC.............................................................................................22190.0090812043
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................21181.0081771012
.............................................................................................AAGCGTTTGGATTCTGAAAC...................................................20180.0080751202
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................24176.0076510367
............................................................................................AAAGCGTTTGGATTCTGAAAC...................................................21150.00502860610
..................................................TTTAGAATTCCTACGCTTT...............................................................................................19148.0048451002
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................22140.00401600024
...........................................................................................CAAAGCGTTTGGATTCTGAAAA...................................................22137.0037281017
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................23134.0034301102
..................................................TTTAGAATTCCTACGCTT................................................................................................18130.0030281010
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................22127.00271600011
........................................................................GTCGCC-TACGAAACTCGG.........................................................................18125.0025900124
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................23122.0022201001
...........................................................................................CAAAGCGTTTGGATTCTGAAACG..................................................23118.001890018
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................22116.0016410002
..............................................................................................AGCGTTTGGATTCTGAAAC...................................................19115.0015102003
...........................................................................................CAAAGCGTTTGGATTCTGAT.....................................................20112.0012120000
....................................................TAGAATTCCTACGCTTTACC............................................................................................20111.001123006
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................18111.001180012
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................21111.001170004
.................................................TTTTAGAATTCCTACGCTTT...............................................................................................20110.001071002
...........................................................................................CAAAGCGTTTGGATTCTGG......................................................19110.0010100000
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................2019.00927000
..........................................................................................GCAAAGCGTTTGGATTCTGAAAA...................................................2317.00740012
..........................................................................................GCAAAGCGTTTGGATTCTGA......................................................2017.00750002
..........................................................................................GCAAAGCGTTTGGATTCTGAAACT..................................................2416.00640002
.................................................TTTTAGAATTCCTACGCTT................................................................................................1916.00650001
............................................................................................AAAGCGTTTGGATTCTGAAA....................................................2016.00650001
...........................................................................................CAAAGCGTTTGGATTCTGAAC....................................................2115.00540010
..................................................TTTAGAATTCCTACGCTTTACG............................................................................................2215.00550000
...............................................................................................GCGTTTGGATTCTGAAAC...................................................1814.00440000
...........................................................................................CAAAGCGTTTGGATTCTGAAT....................................................2114.00440000
.....................................................AGAATTCCTACGCTTTACC............................................................................................1914.00411002
..........................................................................................GCAAAGCGTTTGGATTCTGAAACA..................................................2413.00310002
.................................................TTTTAGAATTCCTACGCTTTA..............................................................................................2113.00330000
...........................................................................................CAAAGCGTTTGGATTCTGAAG....................................................2113.00330000
..................................................TTTAGAATTCCTACGCTTTACCGTT.........................................................................................2513.00310002
...........................................................................................CAAAGCGTTTGGATTCTGAAAG...................................................2213.00330000
...........................................................................................CAAAGCGTTTGGATTCTT.......................................................1822.50550000
..................................................TTTAGAATTCCTACGCTTTACCGTCG........................................................................................2612.00200002
..................................................TTTAGAATTCCTACGCTTTACCGA..........................................................................................2412.00210001
..................................................TTTAGAATTCCTACGCTTAC..............................................................................................2012.00210001
............................................................................................AAAGCGTTTGGATTCTGAAACC..................................................2212.00210100
............................................................................................AAAGCGTTTGGATTCTGAAACT..................................................2212.00210010
..........................................................................................GCAAAGCGTTTGGATTCTG.......................................................1912.00200002
...........................................................................................CAAAGCGTTTGGATTCTGAAACAT.................................................2412.00220000
..........................................................................................GCAAAGCGTTTGGATTCTGAAACC..................................................2412.00220000
..................................................TTTAGAATTCCTACGCTTTT..............................................................................................2012.00220000
..................................................TTTAGAATTCCTACGCTTTACCGG..........................................................................................2412.00201001
..................................................TTTAGAATTCCTACGCTTTACCGC..........................................................................................2412.00220000
............................................................................................AAAGCGTTTGGATTCTGAAACA..................................................2212.00210010
..........................................................................................GCAAAGCGTTTGGATTCTGAAG....................................................2212.00220000
............................................................................................AAAGCGTTTGGATTCTGA......................................................1812.00220000
..............................................................................................AGCGTTTGGATTCTGAAACC..................................................2012.00220000
...........................................................................................CAAAGCGTTTGGATTCTGAATT...................................................2211.00110000
dp5
A--C------------------------------GAGGATATTGTAGTGTTTTAGAATTCCTACGCTTTACCGTTGCAAAACGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTAT----------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................22139546.0039546272532482329337228299211011711197
...........................................................................................CAAAGCGTTTGGATTCTGAAAC...................................................2218999.0089991867088962311232348417305869
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................2114676.004676459154529683616132557142
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................2111357.0013572651891183140311070
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................231659.00659215091343215022817
...................................................TTAGAATTCCTACGCTTTACC............................................................................................211449.00449021914204010902
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC...................................................231388.00388015413639071276
...........................................................................................CAAAGCGTTTGGATTCTGAAACA..................................................231263.002630394315151381291
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................221151.0015102630783101210
...........................................................................................CAAAGCGTTTGGATTCTGAAACC..................................................231129.00129013272546019134
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................201127.001270279682100641
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................221115.001153240001191373
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................20192.0092063124010210
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................20175.0075050426010147
............................................................................................AAAGCGTTTGGATTCTGAAAC...................................................21175.0075045211110024
...........................................................................................CAAAGCGTTTGGATTCTGAAAA...................................................22171.0071078200030123
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................23161.00610176270001010
....................................................TAGAATTCCTACGCTTTACC............................................................................................20154.005408343000000
..................................................TTTAGAATTCCTACGCTTT...............................................................................................19149.004905328260401
...........................................................................................CAAAGCGTTTGGATTCTGAAACT..................................................23148.004803442326024
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................22138.003802711000801
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................24128.002801217160001
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................22122.002202212100311
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................23118.001801312000200
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................19116.00160300220207
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................21116.00160914010010
....................................................TAGAATTCCTACGCTTTACCG...........................................................................................21114.001401211000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAAA..................................................23112.00120400000800
..................................................TTTAGAATTCCTACGCTTTACG............................................................................................22110.00100106000021
........................................................................GTTGCAAAACGAAATTCGG.........................................................................19110.00100320110003
..................................................TTTAGAATTCCTACGCTTTT..............................................................................................2019.0090008010000
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................2319.0090333000000
...................................................TTAGAATTCCTACGCTTTA..............................................................................................1918.0080413000000
....................................................TAGAATTCCTACGCTTTAC.............................................................................................1918.0080601010000
............................................................................................AAAGCGTTTGGATTCTGAAA....................................................2018.0080300000005
.............................................................................................AAGCGTTTGGATTCTGAAAC...................................................2018.0080700000100
.................................................TTTTAGAATTCCTACGCTTTACC............................................................................................2318.0080503000000
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................2118.0080100110131
...................................................TTAGAATTCCTACGCTTTACCA...........................................................................................2215.0050311000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACAA.................................................2415.0050300000200
............................................................................................AAAGCGTTTGGATTCTGAAACA..................................................2215.0050500000000
..................................................TTTAGAATTCCTACGCTTTACCGC..........................................................................................2415.0050005000000
..................................................TTTAGAATTCCTACGCTTTACAA...........................................................................................2315.0050410000000
......................................................GAATTCCTACGCTTTACC............................................................................................1815.0050500000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACCA.................................................2415.0050201010100
..................................................TTTAGAATTCCTACGCTTTACCGTTGC.......................................................................................2714.0040201000010
...........................................................................................CAAAGCGTTTGGATTCTGAAAT...................................................2214.0040100110001
..................................................TTTAGAATTCCTACGCTTTACCGTAA........................................................................................2614.0040310000000
..................................................TTTAGAATTCCTACGCTTC...............................................................................................1914.0040004000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAACC..................................................2414.0040000000400
...........................................................................................CAAAGCGTTTGGATTCTGAAACAAA................................................2514.0040400000000
..................................................TTTAGAATTCCTACGCTTTACCGA..........................................................................................2413.0030200100000
...........................................................................................CAAAGCGTTTGGATTCTGAAAAAA.................................................2413.0030200000100
...................................................TTAGAATTCCTACGCTTTACCGT..........................................................................................2313.0030201000000
..................................................TTTAGAATTCCTACGCTTTACCAAA.........................................................................................2513.0030100000200
...........................................................................................CAAAGCGTTTGGATTCTGAAACGAG................................................2513.0030000000300
.....................................................AGAATTCCTACGCTTTACC............................................................................................1913.0030201000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACCTCT...............................................2613.0030000000300
..................................................TTTAGAATTCCTACGCTT................................................................................................1813.0030002000100
..........................................................................................GCAAAGCGTTTGGATTCTGAAAA...................................................2313.0030100000020
.............................................................................................AAGCGTTTGGATTCTGAAA....................................................1913.0030300000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACCC.................................................2412.0020000000020
....................................................TAGAATTCCTACGCTTTACCGA..........................................................................................2212.0020200000000
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................1812.0020200000000
...................................................TTAGAATTCCTACGCTTTACA............................................................................................2112.0020200000000
droPer2
A--C------------------------------GAGGATATTGTAGTGTTTTAGAATTCCTACGCTTTACCGTTGCAAAACGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTAT----------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................2212192.0021927185165237352310
...........................................................................................CAAAGCGTTTGGATTCTGAAAC...................................................2211937.0019376681112542662978
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................211619.00619121212431101294
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................211425.004251972063713629
...........................................................................................CAAAGCGTTTGGATTCTGAAACA..................................................231125.001252541176711
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................231100.00100314138161
...........................................................................................CAAAGCGTTTGGATTCTGAAACC..................................................23172.007238417193
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................20160.006094013331
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................19156.005695011301
...........................................................................................CAAAGCGTTTGGATTCTGAAACT..................................................23152.005223306182
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC...................................................23144.004415411383
...................................................TTAGAATTCCTACGCTTTACC............................................................................................21137.00370340120
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................22136.00362500650
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................24125.00250402181
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................22122.00221201000
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................20119.00190190000
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................20119.0019071380
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................23117.00170130130
............................................................................................AAAGCGTTTGGATTCTGAAAC...................................................21117.0017080450
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................18116.00160104110
..................................................TTTAGAATTCCTACGCTTT...............................................................................................19111.0011110540
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................2117.007400111
..................................................TTTAGAATTCCTACGCTTTACCAA..........................................................................................2416.006060000
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................2116.006131100
...........................................................................................CAAAGCGTTTGGATTCTGAAAA...................................................2216.006400110
............................................................................................AAAGCGTTTGGATTCTGAAA....................................................2015.005010040
...........................................................................................CAAAGCGTTTGGATTCTGAAACAA.................................................2415.005050000
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................2315.005020120
..................................................TTTAGAATTCCTACGCTTTACAA...........................................................................................2315.005050000
...........................................................................................CAAAGCGTTTGGATTCTGAAACG..................................................2314.004110020
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................2214.004040000
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................2214.004010120
........................................................................GTTGCAAAACGAAATTCGG.........................................................................1914.004040000
..........................................................................................GCAAAGCGTTTGGATTCTGA......................................................2013.003110100
..................................................TTTAGAATTCCTACGCTT................................................................................................1813.003300000
...........................................................................................CAAAGCGTTTGGATTCTGAAAAAA.................................................2413.003300000
...........................................................................................CAAAGCGTTTGGATTCTGAAACCA.................................................2413.003020010
............................................................................................AAAGCGTTTGGATTCTGA......................................................1812.002020000
..................................................TTTAGAATTCCTACGCTTTT..............................................................................................2012.002010100
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................2312.002100010
A--C------------------------------GAGGATATTGTAGTGT..................................................................................................................1812.002000020
....................................................TAGAATTCCTACGCTTTACC............................................................................................2012.002010010
...........................................................................................CAAAGCGTTTGGATTCTGG......................................................1912.002200000
.............................................................................................AAGCGTTTGGATTCTGAAAC...................................................2012.002000011
...........................................................................................CAAAGCGTTTGGATTCTGAT.....................................................2012.002000020
..........................................................................................GCAAAGCGTTTGGATTCTGTT.....................................................2111.001100000
..................................................TTTAGAATTCCTACGCTTTACCTGA.........................................................................................2511.001000010
...................................................TTAGAATTCCTACGCTTTACA............................................................................................2111.001010000
...........................................................................................CAAAGCGTTTGGATTCTGATC....................................................2111.001000010
..................................................TTTAGAATTCCTACGCTTTAT.............................................................................................2111.001000010
..................................................TTTAGAATTCCTACGCTTTACCGTAAA.......................................................................................2711.001010000
...........................................................................................CAAAGCGTTTGGATTCTGT......................................................1911.001000010
...................................................................................AAATTCGGCAAAGCGTTTGGATTCT........................................................2511.001000100
............................................................................................AAAGCGTTTGGATTCTGAAACC..................................................2211.001000010
..................................................TTTAGAATTCCTACGCTTTACAT...........................................................................................2311.001010000
...........................................................................................CAAAGCGTTTGGATTCTGAAC....................................................2111.001000010
......................................................GAATTCCTACGCTTTACC............................................................................................1811.001000100
..................................................TTTAGAATTCCTACGCTTTACCGAAA........................................................................................2611.001010000
..................................................TTTAGAATTCCTACGCTTAC..............................................................................................2011.001010000
...................................................TTAGAATTCCTACGCTTTACCAAA.........................................................................................2411.001010000
..................................................TTTAGAATTCCTACGCTTTACCAAA.........................................................................................2511.001010000
..............................................................................................AGCGTTTGGATTCTGAAAC...................................................1911.001100000
..........................................................................................GCAAAGCGTTTGGATTCTGAAAA...................................................2311.001100000
droAna3
------------------------------------------------GTTTTAGAATTCCTACGCTTTACCGTTGCA-TATGAAATTAGGCAAAGCGTTTGGATTCTGGAACCCTATGTATTCA---------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................2214574.004574372189738140362091
...........................................................................................CAAAGCGTTTGGATTCTGGAAC...................................................2212484.002484119288124842601321
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................211854.00854275017232294
...........................................................................................CAAAGCGTTTGGATTCTGGAACA..................................................231389.003894202332328
...........................................................................................CAAAGCGTTTGGATTCTGGAA....................................................211199.0019911725026103
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................22189.008927430010
...........................................................................................CAAAGCGTTTGGATTCTGGA.....................................................20187.008741021952
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................23183.00839910064
...................................................TTAGAATTCCTACGCTTTACC............................................................................................21149.004928120009
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................20148.004811103132
...........................................................................................CAAAGCGTTTGGATTCTGG......................................................19148.00481007337
...........................................................................................CAAAGCGTTTGGATTCTGGAACT..................................................23145.00451004337
...........................................................................................CAAAGCGTTTGGATTCTGGAAA...................................................22135.00352300327
............................................................................................AAAGCGTTTGGATTCTGGAAC...................................................21129.002912001214
..........................................................................................GCAAAGCGTTTGGATTCTGGAA....................................................22127.00273001023
........................................................................GTTGCA-TATGAAATTAGG.........................................................................18125.00250010024
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................23125.00250232000
..................................................TTTAGAATTCCTACGCTTTACAA...........................................................................................23124.00240231000
..................................................TTTAGAATTCCTACGCTTT...............................................................................................19116.00160301012
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................21114.00140120002
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................24113.00130001012
..........................................................................................GCAAAGCGTTTGGATTCTGGA.....................................................21112.0012100407
...........................................................................................CAAAGCGTTTGGATTCTGGAAT...................................................22111.0011000317
..........................................................................................GCAAAGCGTTTGGATTCTGG......................................................20110.0010000019
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................2218.008040004
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................2017.007150010
...........................................................................................CAAAGCGTTTGGATTCTGGAAAA..................................................2316.006200112
...........................................................................................CAAAGCGTTTGGATTCTGGAACG..................................................2316.006001104
....................................................TAGAATTCCTACGCTTTACC............................................................................................2016.006230001
............................................................................................AAAGCGTTTGGATTCTGGAACA..................................................2215.005000005
..................................................TTTAGAATTCCTACGCTTTAAA............................................................................................2215.005041000
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................2214.004310000
..................................................TTTAGAATTCCTACGCTTTACAAA..........................................................................................2414.004040000
..........................................................................................GCAAAGCGTTTGGATTCTGGAAA...................................................2314.004000004
..................................................TTTAGAATTCCTACGCTTTACCGTT.........................................................................................2514.004000004
...........................................................................................CAAAGCGTTTGGATTCTGGAG....................................................2114.004010201
...........................................................................................CAAAGCGTTTGGATTCTGGT.....................................................2013.003000102
..................................................TTTAGAATTCCTACGCTTTACCAA..........................................................................................2413.003030000
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................1813.003001002
..................................................TTTAGAATTCCTACGCTTTAAAA...........................................................................................2313.003030000
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................2312.002010001
...........................................................................................CAAAGCGTTTGGATTCTGGAAG...................................................2212.002100001
..................................................TTTAGAATTCCTACGCTT................................................................................................1812.002010100
....................................................TAGAATTCCTACGCTTTAC.............................................................................................1912.002110000
..................................................TTTAGAATTCCTACGCTTAC..............................................................................................2012.002020000
..................................................TTTAGAATTCCTACGCTTTACG............................................................................................2212.002200000
...........................................................................................CAAAGCGTTTGGATTCTGGTT....................................................2111.001000100
...........................................................................................CAAAGCGTTTGGATTCTGGC.....................................................2011.001000100
..............................................................................................AGCGTTTGGATTCTGGAAC...................................................1911.001100000
...........................................................................................CAAAGCGTTTGGATTCTGT......................................................1911.001000001
..........................................................................................GCAAAGCGTTTGGATTCTGGAG....................................................2211.001000001
..................................................TTTAGAATTCCTACGCTTTACCGTTGC.......................................................................................2711.001000100
...................................................TTAGAATTCCTACGCTTTA..............................................................................................1911.001000001
...........................................................................................CAAAGCGTTTGGATTCTGGAACAA.................................................2411.001000001
..........................................................................................GCAAAGCGTTTGGATTCTGGT.....................................................2111.001000001
............................................................................................AAAGCGTTTGGATTCTGGAACAA.................................................2311.001100000
...........................................................................................CAAAGCGTTTGGATTCTGGAAGA..................................................2311.001000100
............................................................................................AAAGCGTTTGGATTCTGGA.....................................................1911.001000001
..........................................................................................GCAAAGCGTTTGGATTCTGGAAC...................................................2311.001000001
droBip1
A--CCAGAAA-------------------------AGGGTATTGTGGAGTTTTAGAATTCCTACGCTTTACCGTTGC--TATGATATTTGGCAAAGCGTTTGGATTCTGGAACCCTACGTATTCA---------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GGGCAAGTCT-------------------------GGGGCGTTGTAGGGCTTTAGAATTCCTACGCTTTACCGTGGCA-TTCGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTATGCGTCCGTGAGTA---------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
-----------------------------------TGGGTATTGTAGAGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
-----------------------------------TGGATATTGTAGGGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
-----------------------------------TGGATATTGTAGGGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
-------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
-------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTAGCA-TACGAAAGTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
-----------------------------------TGGTTGCTGTAGAGTTTTAGAATTCCTACGCTTTACCGTGGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................22179279.00792790000274400023517103229713140000000073921613881492182550520000000000000019001000052200000000000000000211398580210170011373779489820745412015104696582623005021191914576661737214766731483064341529198742120413519151273000000000200000010000000010000000000327443530295317407972146199514821570233447473924838119419000055660000000000000000310000000000302205017118265318453523812004526028306187101125638210000001429001470000010100000301000000000516581674147817627162300004202745100000100002000015125224818111503981106100
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................21110556.001055600007000001100443020000000082251682232743500000000000000100000000000000000000000000064323500000000004516115160124279000122031020511150114132804135116417519309213000000000000000000000000000000005000329180103351668923030318523326613588722810000063400000000000000001000000000000003511133054126000032014697100161660160000032004900100001100000000000000001121251263390000010000603112000010000000000313800000090122400
...........................................................................................CAAAGCGTTTGGATTCTGAAAC---------------------------------------------------2219236.009236000060010301003002000000000514915217201000000000000100000000044000000000000000000000019002300032725163136501572130001000051150235741011126116512410424200000000000010000000000000000000000536140202731538196111691616582972800000750000000000000000000000000000402220114102000001007848034110410032770140000011600380000001100000001000002102354310338285967811376164010016339191000002200013700044207379295245414337026100
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................2314783.00478300001030001010000011000000001519161451681200000000000000300000000010000000000000000000002400000001123302253533573090000000120100317633013082087196915912800000000000000000000000000000000000026434302241916234189211572123741354400000055200000000000000000000000000000001111104121001000025012113000635020000026007000000000000000000000000019251562021010000000220000020000000000115010340061012200
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................2111568.0015680000200000000000000000000000100000000000000000000000000021000000000000000000000000000000001600222000004200000100000000530100360401200000000000000000010100000000000000045370210061822111916320000030000000000000000000000000000010010000000000010001170310100003607000001800600010000000010010000000101338970780461392001003523637000020000000100184111951591003813600
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................2011149.001149000010000000000000000000000222372945110000000000000020000000000000000000000000000010600000000005003000001260000000100000014510001702333621000000000000000000000000000000000000391320435224235038312704177800000630000000000000000000000000000000000000020000000010001700019000000020040000000000000000000000000169245700000000000100000000000000000001400000050900
...................................................TTAGAATTCCTACGCTTTACC............................................................................................211697.00697000010000010000000000000000246443936110000000000000000000000000000000000000000000000100000000001002000100170000000000000113414045150132236000000000000000000000000000000000000255403655282539474571116410000022000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000010071100000000000000000000000000000100000000300
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................221625.0062500001010000001000000000000000000000000000000000001000000000000000000000000000000011000000000001110000001600000000000031107318071548017023220000000000000000000000000000000000001014010521122813116604053380000069000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000031230000000000000000000000000000000300000020200
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................221603.00603000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000020010000000000000000001003010303074000000000000000000000000000000000000102009002151811222800000060000000000000000200000000000000000000000000000043002600023010000070030000001010000100000000001243216412361244000001601714002000000010000021234120703103500
........................................................................GTGGCA-TACGAAATTCGG.........................................................................181586.005860000000000000000010000000000000000000000000000000000000012000000000000000000000000000000000401190310001900000000010010560300450602500000000000000000000000000000000000082201400022060802240000000000000000000000020000000000000000000000000000082601190014501000005008000000000000000000000000057302150190920001003034000000000000000008101000360300
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................221466.004660000160000001000001000000000000000000000000000000000000000000000000000000000000001000000000002402111100003600010000000000122120261212006319000000000000000000000000000000000000102502044529938013191410000010000000000000000000000000000000000000100000010000000210001200000002001000000000000000000000000020120100000000000000000000000000000200000000200
..................................................TTTAGAATTCCTACGCTTT...............................................................................................191400.0040000000000000000000000000000001789405000000000000000000000000000000000000000000000010000000000000100000070000000000000012081000009371015000000000000000000000000000000000000155009110588102128620800000230000000000000000000000000000000000000000000000000000000003010000000030000000000000000000000000343140000000000001000000000000000000200000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAA---------------------------------------------------221399.00399000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000010100001200000000000000000100040401300000000000000001000000000000000000018230900270111130370000003000000000000000020000000000000000000000000013000010010000320000000400000000000010000000000000002319181904570000009176000000000000000018321321030400
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................201337.003370000100000000000000000000000200000000000000000000000000000000000000000000000000100000000000200400000000000000000000011000002010210000000000000000000000000000000000009120110241634224000003000000000000000000000000000000000000001000000004202400002001000006003000000000000000000000000031171710041210000080440000010000000000499901430120800
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------231260.0026000000000000000000000000000000183010000000000000010000000000000000000000000000000000000000000000000000300000000001000010100020307600000000000000000000000000000000000089015000619011400000000000000000000000000000000000000000001000000000052001110000201000002003000000000000000000000001048680365140000040130000000000000000136104110110400
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................191252.00252000000000000000000000000000030020000000000000000000000000000000000000000000000000000000000000020000000000000000000000300003100201000000000000000000000000000000000000613041042103646900000500000000000000000000000000000000001000000000000410014000150000000200300000000000000000000000001645110111000000504000000000000100002541910043020600
..........................................................................................GCAAAGCGTTTGGATTCTG.......................................................191151.001510000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400320050021308000000000000000000000000000000000000000000000000000000000140000400000000001000000000000000000000000075514000000000000220000000000000000041100000180500
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................211126.0012600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000020001000000000000000000000000000000000000043020041000115000000400000000000000000000000000000000000000000000000000011000010000000300000000000000000000000000004116403000000003031000000101000100013231140080200
..................................................TTTAGAATTCCTACGCTTTACATC..........................................................................................241116.0011600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................231114.00114000020000101000000000000000000000000000000000000100000000000000000000000000000000000000000030010100001400000000000000110100020203500000000000000000000000000000000000043020010020411000000400000000000000000000000000000000000001000002623000000000000000000000000000000000000000000000000010000000000000000000000000000000000200000000000
..................................................TTTAGAATTCCTACGCTTTACCTC..........................................................................................241108.0010800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................211104.00104000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000011000000000000001002031306086000000000000000000000000000000000000312010017000143141000005000000000000000000000000000000000000000000010000000100000000000000001000000000000000000000000000130000000000001000000000000000000100000000000
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................201102.00102000000000010000000000000000305511010000000000000000000000000000000000000000000000000000000000000000000100000000000000210100000014000000000000000000000000000000000000021703332125601241000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000100
..........................................................................................GCAAAGCGTTTGGATTCTGA......................................................20196.009600000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000001000000200000000000000100000000310000000000000000000000000000000000000010011021021313000000100000000000000000000000000000000000000000000000000002000110000000000100000000000000000000000009105200100000002021000000000000000012120000050200
............................................................................................AAAGCGTTTGGATTCTGAAAC---------------------------------------------------21186.00860000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000007100401110506140000001000000000000000000000000000000000000000000000000000030000100000001001000000000000000000000000033220610000000103200000000000000000900100020100
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................22182.008200000000000000000000000000021000000000000000000000000000000000000000000000000000000000000002012000000000000000000000310000000201120000000000000000000000000000000000002304022825112310000012000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100001030100
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................24182.0082000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000001000000004011000000000000000000000000000000000000050100010200020000001000000000000000000000000000000000000000000000000000200000100000000001000000000000000000000000010558000100000000000000000000000000010110000301200
..................................................TTTAGAATTCCTACGCTTTACCGATC........................................................................................26177.007700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................18176.0076000000000000000000000000000001010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000020000011000002000000000000000000000000000000000000000000000000000000000230000100000001000000000000000000000000000055121600010000000013000000000000000001200000030000
..................................................TTTAGAATTCCTACGCTTTACG............................................................................................22169.006900001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000110100000000000000000000000000000000000000025022905110111071000004000000000000000000000000000000000000000000000000100000001001000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................TTTAGAATTCCTACGCTTTAT.............................................................................................21162.00620000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000100000000000000000000000111000101000330000000000000000000000000000000000000160011042903320000003000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................23161.0061000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000120001000000000000000000000000000007068000000000000000000000000000000000000770200100011020000003000000000000000000000000000000000000000000012000000000101200000000002000000000000000000000000000100000000000000000000000000000000000000000100
...........................................................................................CAAAGCGTTTGGATTCTGAAAT---------------------------------------------------22154.00540000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000001302001401010200000010000000000000000000000000000000000000000000210000001000000000000010000000000000000000000000000212401000000002020000000000000010011211000000100
....................................................TAGAATTCCTACGCTTTACC............................................................................................20153.00530000000000000000010000000002000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000020000000000000000000000000000000000000230122370900100000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTT................................................................................................18146.0046000000000000000010000000000004010000000000000000000000000000000000000000000000000000000000000010000001000000000000001200000000210000000000000000000000000000000000000000210114015407000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................23146.0046000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000014000000000000000100000006000000000000000000000000000000000000000450211110201330000001000000000000000000000000000000000000100000032000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
........................................................................GTGGCA-TACGAAATTCGGT........................................................................19142.00420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000020000000000000000000000000020000100000000000000000000000000000000000000000101201520000000100000000000000000000410100040300
..................................................TTTAGAATTCCTACGCTTTATT............................................................................................22140.00400000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000170010000000100000000000000000000000000000000000000000000000000000000000000120100023301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTTTAGAATTCCTACGCTTTACC............................................................................................23137.00370000300000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTAGAATTCCTACGCTTAC..............................................................................................20134.0034000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000160200063702120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAAA---------------------------------------------------23122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000110100000100000000002000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000001100010000000000100000000000000000600000000100
droSim2
-------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTGGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTAT----------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................22159696.0059696552644391953342814801813143165115201023
...........................................................................................CAAAGCGTTTGGATTCTGAAAC...................................................2217754.0077546461110107990453181702000010
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................2115516.0055165025104358009101070100010
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................2114354.004354415220463111221460601000
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................2211771.00177113854034300100000200000
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................2311655.00165512651372211273102411100000
...........................................................................................CAAAGCGTTTGGATTCTGAAACA..................................................2311066.0010669452279100014301100000
...........................................................................................CAAAGCGTTTGGATTCTGAAAA...................................................221812.00812775112500000100000000
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................201575.00575520929001210220000000
..................................................TTTAGAATTCCTACGCTT................................................................................................181458.00458600001338500000000000
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................201294.0029486002419900201000000
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................211260.0026023651700100100000000
..................................................TTTAGAATTCCTACGCTTT...............................................................................................191250.0025015110049400000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACT..................................................231230.0023020631700000120100000
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC...................................................231187.0018713115110300000000000
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................191156.0015614203011000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACC..................................................23184.00843204004800000000000
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................23177.0077770000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAAA..................................................23174.0074701300000000000000
...................................................TTAGAATTCCTACGCTTTACC............................................................................................21169.00692710113900000000000
..........................................................................................GCAAAGCGTTTGGATTCTGA......................................................20151.0051490000100100000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACAA.................................................24135.0035272410000100000000
...........................................................................................CAAAGCGTTTGGATTCTT.......................................................18131.0031310000000000000000
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................22128.0028220100500000000000
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................22127.0027222100000020000000
........................................................................GTGGCA-TACGAAATTCGG.........................................................................18127.0027406000000001700000
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................18125.0025900001400101000000
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................23122.0022200200000000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAAA...................................................23119.0019190000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGG......................................................19119.0019190000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACG..................................................23118.0018150300000000000000
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................22116.0016150100000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAG....................................................21115.0015140100000000000000
............................................................................................AAAGCGTTTGGATTCTGAAAC...................................................21114.0014140000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAT....................................................21113.0013130000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAT...................................................22113.0013130000000000000000
..........................................................................................GCAAAGCGTTTGGATTCTG.......................................................19111.0011100000100000000000
.............................................................................................AAGCGTTTGGATTCTGAAAC...................................................20110.001091000000000000000
..............................................................................................AGCGTTTGGATTCTGAAAC...................................................19110.0010100000000000000000
..............................................................................................AGCGTTTGGATTCTGAAA....................................................18110.0010100000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAT.....................................................2019.00990000000000000000
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................2119.00990000000000000000
............................................................................................AAAGCGTTTGGATTCTGAAA....................................................2018.00862000000000000000
...............................................................................................GCGTTTGGATTCTGAAAC...................................................1818.00880000000000000000
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................2317.00760100000000000000
..........................................................................................GCAAAGCGTTTGGATTCTGG......................................................2017.00770000000000000000
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................2016.00631000200000000000
..................................................TTTAGAATTCCTACGCTTTACG............................................................................................2216.00660000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAAAA.................................................2416.00660000000000000000
...................................................TTAGAATTCCTACGCTTTA..............................................................................................1916.00600000600000000000
..........................................................................................GCAAAGCGTTTGGATTCT........................................................1815.00540000100000000000
..................................................TTTAGAATTCCTACGCTTTACCGA..........................................................................................2415.00550000000000000000
..........................................................................................GCAAAGCGTTTGGATTCTT.......................................................1915.00550000000000000000
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................2414.00430000100000000000
....................................................TAGAATTCCTACGCTTTACC............................................................................................2014.00420000200000000000
..................................................TTTAGAATTCCTACGCTTC...............................................................................................1914.00440000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGT......................................................1914.00440000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAG.....................................................2013.00330000000000000000
............................................................................................AAAGCGTTTGGATTCTGAAACA..................................................2213.00330000000000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAAT...................................................2313.00330000000000000000
.............................................................................................AAGCGTTTGGATTCTGAAA....................................................1913.00320100000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACTT.................................................2413.00330000000000000000
..................................................TTTAGAATTCCTACGCTTTAT.............................................................................................2112.00220000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAG...................................................2212.00220000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACCC.................................................2412.00200000200000000000
.......................................................................................TCGGCAAAGCGTTTGGATTCTGAAA....................................................2512.00220000000000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAACAT.................................................2412.00220000000000000000
..................................................TTTAGAATTCCTACGCTTTACAA...........................................................................................2312.00210000010000000000
........................................................................GTGGCA-TACGAAATTCGGA........................................................................1912.00200100000000100000
............................................................................................AAAGCGTTTGGATTCTGAAAA...................................................2112.00220000000000000000
............................................................................................AAAGCGTTTGGATTCTGAAACT..................................................2212.00220000000000000000
.....................................................AGAATTCCTACGCTTTACC............................................................................................1912.00200000200000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAAT..................................................2312.00210100000000000000
.................................................................................................GTTTGGATTCTGAAACA..................................................1712.00200000000002000000
..................................................TTTAGAATTCCTACGCTTA...............................................................................................1912.00220000000000000000
............................................................................................AAAGCGTTTGGATTCTGAAACC..................................................2212.00200000200000000000
...........................................................................................CAAAGCGTTTGGATTCTGAC.....................................................2012.00220000000000000000
...............................................................................................GCGTTTGGATTCTGAAAA...................................................1811.00110000000000000000
.............................................................................................AAGCGTTTGGATTCTGAAAAA..................................................2111.00110000000000000000
......................................................................................TTCGGCAAAGCGTTTGGATTCT........................................................2211.00101000000000000000
.............................................................................................AAGCGTTTGGATTCTGAA.....................................................1811.00110000000000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAT....................................................2211.00110000000000000000
..................................................TTTAGAATTCCTACGCT.................................................................................................1711.00100000000001000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAG....................................................2211.00110000000000000000
..................................................TTTAGAATTCCTACGCTTTG..............................................................................................2011.00110000000000000000
.................................................TTTTAGAATTCCTACGCTTTACC............................................................................................2311.00110000000000000000
........................................................................................CGGCAAAGCGTTTGGATTCTGT......................................................2211.00110000000000000000
....................................................TAGAATTCCTACGCTTTAC.............................................................................................1911.00110000000000000000
droSec2
-------------------------------------------GTAGAGTTTTAGAATTCCTACGCTTTACCGTCGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAACCCTAT----------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................2211367.0013672712684986
...........................................................................................CAAAGCGTTTGGATTCTGAAAC...................................................221750.007502956229436
...........................................................................................CAAAGCGTTTGGATTCTGAAACA..................................................231368.0036832371271
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................211175.001751511158
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................211150.0015032017110
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................231147.0014734013100
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................19154.005434047
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................20139.003901335
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................22138.0038241121
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC...................................................23133.003311238
...........................................................................................CAAAGCGTTTGGATTCTGAAAA...................................................22129.002911522
...........................................................................................CAAAGCGTTTGGATTCTGAAACT..................................................23123.002300419
........................................................................GTCGCA-TACGAAATTCGG.........................................................................18118.001800108
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................20116.001611014
...................................................TTAGAATTCCTACGCTTTACC............................................................................................21116.001614002
..........................................................................................GCAAAGCGTTTGGATTCTGA......................................................20114.001403110
............................................................................................AAAGCGTTTGGATTCTGAAAC...................................................21114.00144046
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................18113.001300013
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................21112.001201110
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................24112.001200012
...........................................................................................CAAAGCGTTTGGATTCTGT......................................................19110.00100109
...........................................................................................CAAAGCGTTTGGATTCTGAAAAA..................................................2318.0080107
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................2014.0043001
..........................................................................................GCAAAGCGTTTGGATTCTG.......................................................1914.0040004
...........................................................................................CAAAGCGTTTGGATTCTGAAACG..................................................2314.0040112
............................................................................................AAAGCGTTTGGATTCTGAAACA..................................................2213.0031011
...........................................................................................CAAAGCGTTTGGATTCTGAAACAA.................................................2412.0020002
...........................................................................................CAAAGCGTTTGGATTCTGAAACC..................................................2312.0020011
...........................................................................................CAAAGCGTTTGGATTCTGAAAT...................................................2212.0020020
..................................................TTTAGAATTCCTACGCTTT...............................................................................................1912.0020002
..........................................................................................GCAAAGCGTTTGGATTCTGAAT....................................................2212.0020011
............................................................................................AAAGCGTTTGGATTCTGAAAAA..................................................2211.0010001
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................2311.0011000
..........................................................................................GCAAAGCGTTTGGATTCTGAAACA..................................................2411.0010001
.................................................TTTTAGAATTCCTACGCTTTACC............................................................................................2311.0011000
............................................................................................AAAGCGTTTGGATTCTGAAA....................................................2011.0010001
................................................................................................CGTTTGGATTCTGAAACA..................................................1811.0010001
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................2211.0011000
..................................................TTTAGAATTCCTACGCTTTACCGTT.........................................................................................2511.0010001
..........................................................................................GCAAAGCGTTTGGATTCTGAAAA...................................................2311.0010001
..................................................TTTAGAATTCCTACGCTT................................................................................................1811.0010001
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................2211.0010001
...........................................................................................CAAAGCGTTTGGATTCTGAAG....................................................2111.0010001
..........................................................................................GCAAAGCGTTTGGATTCTGAAACT..................................................2411.0010001
........................................................................GTCGCA-TACGAAATTCGT.........................................................................1811.0010001
..................................................TTTAGAATTCCTACGCTTTACG............................................................................................2211.0010001
...........................................................................................CAAAGCGTTTGGATTCTGTT.....................................................2030.3310001
droYak3
-----------------------------------TGGGCGCTGTAGAGTTTTAGAATTCCTACGCTTTACCGTCGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................22117059.001705911576305471274109266160100
...........................................................................................CAAAGCGTTTGGATTCTGAAAC---------------------------------------------------2212983.00298317123810051336136430000
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................2112019.002019189742021567130100
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................2111189.001189101834782144210000
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................221887.0088786401501430000
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................231637.0063737324215116800000
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................201256.0025622716061420000
...........................................................................................CAAAGCGTTTGGATTCTGAAAA---------------------------------------------------221224.002242091503420000
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------231119.001193807901100000
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................191116.001161011002930000
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................211116.001161131001100000
........................................................................GTCGCA-TACGAAATTCGG.........................................................................18190.0090780821100000
...................................................TTAGAATTCCTACGCTTTACC............................................................................................21144.00447221220100000
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................23127.0027250100100000
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................22126.0026144700100000
..........................................................................................GCAAAGCGTTTGGATTCTGA......................................................20121.0021181000200000
............................................................................................AAAGCGTTTGGATTCTGAAAC---------------------------------------------------21119.001994230010000
..................................................TTTAGAATTCCTACGCTTT...............................................................................................19118.0018180000000000
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................22117.0017201401000000
...........................................................................................CAAAGCGTTTGGATTCTGG......................................................19116.0016160000000000
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................20116.0016102102100000
.............................................................................................AAGCGTTTGGATTCTGAAAC---------------------------------------------------20114.0014130000100000
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................18112.001240003500000
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................2219.00940400100000
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................2319.00970200000000
...........................................................................................CAAAGCGTTTGGATTCTT.......................................................1817.00760000100000
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................2417.00710102300000
...........................................................................................CAAAGCGTTTGGATTCTGAAT....................................................2116.00650000100000
....................................................TAGAATTCCTACGCTTTACC............................................................................................2016.00610500000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAT---------------------------------------------------2216.00660000000000
..........................................................................................GCAAAGCGTTTGGATTCTGG......................................................2015.00550000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAAG---------------------------------------------------2215.00540001000000
..................................................TTTAGAATTCCTACGCTT................................................................................................1815.00550000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAG....................................................2115.00550000000000
...........................................................................................CAAAGCGTTTGGATTCTGAAC....................................................2114.00420000200000
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................2314.00430100000000
................................................GTTTTAGAATTCCTACGCTTT...............................................................................................2114.00440000000000
...........................................................................................CAAAGCGTTTGGATTCTGAC.....................................................2014.00440000000000
...........................................................................................CAAAGCGTTTGGATTCTGAT.....................................................2014.00430000100000
..................................................TTTAGAATTCCTACGCTTTG..............................................................................................2013.00320000100000
............................................................................................AAAGCGTTTGGATTCTGAAA....................................................2013.00311000100000
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................2013.00312000000000
..........................................................................................GCAAAGCGTTTGGATTCTG.......................................................1913.00310000200000
..........................................................................................GCAAAGCGTTTGGATTCTGAAG....................................................2213.00330000000000
................................................GTTTTAGAATTCCTACGCTTTA..............................................................................................2213.00330000000000
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................2112.00220000000000
......................................................................................TTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------2712.00220000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAT....................................................2212.00220000000000
.....................................................................................ATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------2812.00220000000000
..................................................TTTAGAATTCCTACGCTTTACG............................................................................................2212.00201100000000
....................................................................................AATTCGGCAAAGCGTTTGGATTCTGAAA....................................................2812.00220000000000
.............................................................................................AAGCGTTTGGATTCTGAAA....................................................1912.00220000000000
..............................................................................................AGCGTTTGGATTCTGAAA....................................................1812.00220000000000
..................................................TTTAGAATTCCTACGCTC................................................................................................1811.00110000000000
..............................................................................................AGCGTTTGGATTCTGAAAC---------------------------------------------------1911.00110000000000
.....................................................AGAATTCCTACGCTTTACC............................................................................................1911.00100100000000
..........................................................................................GCAAAGCGTTTGGATTCTGAC.....................................................2111.00110000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAAC....................................................2211.00110000000000
..........................................................................................GCAAAGCGTTTGGATTCTGAG.....................................................2111.00110000000000
............................................................................................AAAGCGTTTGGATTCTGAA.....................................................1911.00110000000000
..................................................TTTAGAATTCCTACGCTTTACCGTCG........................................................................................2611.00100001000000
..................................................TTTAGAATTCCTACGCTTTC..............................................................................................2011.00110000000000
droEre2
------------------------------------------------GTTTTAGAATTCCTACGCTTTACCGTGGCA-TACGAAATTCGGCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................TTTAGAATTCCTACGCTTTACC............................................................................................2215174.0051746191261167986029690
...........................................................................................CAAAGCGTTTGGATTCTGAAAC---------------------------------------------------221931.00931441588031395790
..................................................TTTAGAATTCCTACGCTTTAC.............................................................................................211562.00562463435734370
..................................................TTTAGAATTCCTACGCTTTACCG...........................................................................................231256.00256321721141900
........................................................................GTGGCA-TACGAAATTCGG.........................................................................181233.002331061012150
...........................................................................................CAAAGCGTTTGGATTCTGAAA....................................................211171.001711174171410
..........................................................................................GCAAAGCGTTTGGATTCTGAAA....................................................22185.008502342740
...........................................................................................CAAAGCGTTTGGATTCTGAA.....................................................20180.008020103740
...........................................................................................CAAAGCGTTTGGATTCTG.......................................................18156.005610100540
...........................................................................................CAAAGCGTTTGGATTCTGAAAA---------------------------------------------------22156.005610503470
...................................................TTAGAATTCCTACGCTTTACC............................................................................................21145.004537500030
...........................................................................................CAAAGCGTTTGGATTCTGA......................................................19144.004420201390
..........................................................................................GCAAAGCGTTTGGATTCTGAAAC---------------------------------------------------23144.0044011741210
..................................................TTTAGAATTCCTACGCTTTA..............................................................................................20140.004031200340
..................................................TTTAGAATTCCTACGCTTTACA............................................................................................22128.002804010230
............................................................................................AAAGCGTTTGGATTCTGAAAC---------------------------------------------------21115.00154010190
...........................................................................................CAAAGCGTTTGGATTCTGT......................................................19114.001400100130
........................................................................GTGGCA-TACGAAATTCGGT........................................................................19111.00110002090
..........................................................................................GCAAAGCGTTTGGATTCTGAA.....................................................21110.00101000180
..........................................................................................GCAAAGCGTTTGGATTCTGA......................................................2018.0080000170
....................................................TAGAATTCCTACGCTTTACC............................................................................................2018.0082300030
..................................................TTTAGAATTCCTACGCTTT...............................................................................................1918.0080000080
..................................................TTTAGAATTCCTACGCTTTACCA...........................................................................................2315.0052000030
..................................................TTTAGAATTCCTACGCTTTACT............................................................................................2215.0054000010
..................................................TTTAGAATTCCTACGCTTTACCGT..........................................................................................2415.0050000140
...........................................................................................CAAAGCGTTTGGATTCTGAAAT---------------------------------------------------2214.0040000040
...................................................TTAGAATTCCTACGCTTTAC.............................................................................................2014.0043000010
..................................................TTTAGAATTCCTACGCTTTAA.............................................................................................2113.0030001020
..................................................TTTAGAATTCCTACGCTT................................................................................................1813.0030000030
.............................................................................................AAGCGTTTGGATTCTGAAAC---------------------------------------------------2013.0030001020
..................................................TTTAGAATTCCTACGCTTTACCT...........................................................................................2312.0020100010
...........................................................................................CAAAGCGTTTGGATTCTGAAAG---------------------------------------------------2212.0020010010
...........................................................................................CAAAGCGTTTGGATTCTGAAT....................................................2112.0020000020
............................................................................................AAAGCGTTTGGATTCTGAAA....................................................2012.0020000110
...........................................................................................CAAAGCGTTTGGATTCTGAAG....................................................2112.0020000110
............................................................................................AAAGCGTTTGGATTCTGA......................................................1811.0010000010
..........................................................................................GCAAAGCGTTTGGATTCTGAAG....................................................2211.0010000010
...........................................................................................CAAAGCGTTTGGATTCTGTT.....................................................2011.0010000010
..................................................TTTAGAATTCCTACGCTTTACCC...........................................................................................2311.0010000010
............................................................................................AAAGCGTTTGGATTCTGAA.....................................................1911.0010000010
........................................................................GTGGCA-TACGAAATTCGT.........................................................................1811.0010000010
...........................................................................................CAAAGCGTTTGGATTCTT.......................................................1811.0010000010
..........................................................................................GCAAAGCGTTTGGATTCTGAAAA---------------------------------------------------2311.0010000100
..................................................TTTAGAATTCCTACGCTTAC..............................................................................................2011.0010000010
...................................................TTAGAATTCCTACGCTTTA..............................................................................................1911.0010000010
..........................................................................................GCAAAGCGTTTGGATTCTGAAAG---------------------------------------------------2311.0010000010
...................................................TTAGAATTCCTACGCTTTACCG...........................................................................................2211.0011000000
..........................................................................................GCAAAGCGTTTGGATTCTG.......................................................1911.0010000010
..................................................TTTAGAATTCCTACGCTTTTG.............................................................................................2111.0010000010
...........................................................................................CAAAGCGTTTGGATTCTGAT.....................................................2011.0010000010
..................................................TTTAGAATTCCTACGCTTTACCGGTC........................................................................................2611.0010000010

Generated: 10/20/2015 at 10:14 PM