ID:

dmo_510

 Coordinate:

scaffold_6328:2719641-2719877 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-67.9 -67.6 -67.5

Flybase annnotation

CDS [Dmoj\GI16414-cds]; exon [dmoj_GLEANR_17136:4]; exon [dmoj_GLEANR_17136:5]; CDS [Dmoj\GI16414-cds]; intron [Dmoj\GI16414-in]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_6328:2280021-2280039 +
  2. scaffold_6473:7129499-7129517 +
  3. scaffold_6473:8266320-8266338 +
  4. scaffold_6473:10888357-10888375 +
  5. scaffold_6473:15069247-15069265 +
  6. dmo_2763  scaffold_6473:15096258-15096276 +
  7. scaffold_6496:1733450-1733468 +
  8. scaffold_6496:9383717-9383735 +
  9. scaffold_6496:19027195-19027213 +
  10. scaffold_6496:20755544-20755562 +
  11. scaffold_6496:21594762-21594780 +
  12. scaffold_6500:10801974-10801992 +
  13. scaffold_6500:10980709-10980727 +
  14. scaffold_6500:15897192-15897210 +
  15. scaffold_6500:23360733-23360751 +
  16. scaffold_6540:11597005-11597023 +
  17. scaffold_6540:31276156-31276174 +
  18. scaffold_6540:32558311-32558329 +
  19. scaffold_6540:33716016-33716034 +
  20. scaffold_6680:3749335-3749353 +
  21. scaffold_6328:125933-125951 +
  22. dmo_510  scaffold_6328:2719791-2719809 +
  23. scaffold_6424:6187-6205 +
  24. scaffold_6473:1831699-1831717 +
  25. scaffold_6500:14643415-14643433 +
  26. scaffold_6500:20712340-20712358 +
  27. scaffold_6500:27223451-27223469 +
  28. scaffold_6680:2441268-2441286 +
  29. scaffold_6680:7545338-7545356 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAATCCACAACGGATGCTGGGCATGTCGATGCCACGGTTTCTGATTCCCGGTAATGCACATGCACATCCACATCCACATCCACATGTCCATGCGCACTCGCATGCACATATGGCCACGTTGATGGCGGGGCCGCCGGCAGTTGTTGCGGCTCCAGTGGCTGCTTGTATTTTGGCCACGCCACAGGCCACGCCCCGTCATCATCATCAGCAGCAGCAGCAGCAGCAGCAACAAAAGCCACAACAGCAGCAACAATCACTAACACAAAACAAAACTGCATTCATTCCAGGCCAATATGCACCACAAGCACCACCGTCAACACCCACACAACAGCAACAA
**************************************************..((((...(((((......((((.((..(((.((((.((((((....)))))).)))).)))....)).))))((.((....)).)).((((((((.(((...((((((..((((....(((((........)))))...................((.((.((....)).)).)).)))).))))))...))).))))))))...................))))).))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V049
head
 V056
head
 M060
embryo
..................................................................................................................................................................................................................................................................................................AATATGCACCACAAGCACCAC.......................... 21 0 1 1.00 1 1 0 0 0 0
....CCACAACGGATGCTGGGCATG........................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................................................................................................................................CCGTCAACATCTACACCACA....... 20 3 18 0.83 15 14 0 0 1 0
........................................................................................................................................................................................................................................................................................................................GTCAGCACCGACACTACAGCA.... 21 3 3 0.33 1 0 0 1 0 0
.............ATGCCGGGGATGTCGATG.................................................................................................................................................................................................................................................................................................................. 18 2 6 0.17 1 0 1 0 0 0
........................................................................................................................................................................................................ATCATCAGCAGCAGCAGCA...................................................................................................................... 19 0 20 0.05 1 0 0 0 1 0
...................................................................................................................................................................................................TCATCATCATCAGCAGCAGCA......................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1
......................................................................................................................................................................................................TCATCATCAGCAGCAGCAGCAGCA................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................TCATCATCATCAGCAGCAGCAGCA...................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................ATCATCAGCAGCAGCAGC....................................................................................................................... 18 0 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GTTAGGTGTTGCCTACGACCCGTACAGCTACGGTGCCAAAGACTAAGGGCCATTACGTGTACGTGTAGGTGTAGGTGTAGGTGTACAGGTACGCGTGAGCGTACGTGTATACCGGTGCAACTACCGCCCCGGCGGCCGTCAACAACGCCGAGGTCACCGACGAACATAAAACCGGTGCGGTGTCCGGTGCGGGGCAGTAGTAGTAGTCGTCGTCGTCGTCGTCGTCGTTGTTTTCGGTGTTGTCGTCGTTGTTAGTGATTGTGTTTTGTTTTGACGTAAGTAAGGTCCGGTTATACGTGGTGTTCGTGGTGGCAGTTGTGGGTGTGTTGTCGTTGTT
**************************************************..((((...(((((......((((.((..(((.((((.((((((....)))))).)))).)))....)).))))((.((....)).)).((((((((.(((...((((((..((((....(((((........)))))...................((.((.((....)).)).)).)))).))))))...))).))))))))...................))))).))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 V110
male body		 M046
female body
 V049
head
......................................................................................................................................................................................................................................................................................................................GGCAGTTGTAGATGTGGTGT....... 20 3 18 1.28 23 0 12 10 1
................................................................................................................................................................................................................................................................................................................CGTGGTTGCACTTGTGGGTATGTT......... 24 3 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................................................................................................................GGCAGTTGTGGATGTGGTGTT...... 21 3 9 0.11 1 0 0 1 0
...............................................................................................................................................................................................GGGCAGTAGTAGTAGTGTTTG............................................................................................................................. 21 3 9 0.11 1 0 1 0 0
................................................................................................................................................................................................GGCAGTAGTAGTAGTGTT............................................................................................................................... 18 2 20 0.05 1 0 0 1 0
......................................................................................................................................................................................................................................................................................................................GGCAGTTGTAGATGTGATG........ 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6328:2719591-2719927 + dmo_510 CAATC-CAC------AACGG-------------ATGCTGGG---CA--TGTCGAT--------------------------------------------------------------------------------------------------------------------------GCCAC---------------------G----GTTTCTGAT---TCCCGGTAATGCACATGCAC---------------------ATCCA--------------------------------------------------CATCCACATCCACATGTCCATGCGCACTCGCAT----------------------------------------G------C-------------------------------------------A--------------------------------------------------------------------------CATATG--GCCACGTTGATGGCGGGGCCGCCGGCAGTTGTTGCGGCTCCAGTGGCTGCTTGTATTTTG---------------------------------GCCAC-------------GCCACAGGCC------ACGCCCCGTCATCATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCAGCAGCAGCAGCAGCAGCAACAA---------------AAGCC---------------------ACAA----------------------------------------------------------CAGCAGC------------------------------AACAATCACTAACACAAAACAAAACTGCATTCATT------CCAGGCCAATATGCACCACAAG-------------------------------------CACCACCGTCAACAC------------------------------------------------CCACACAACAGCAA--------------------------CAA
droVir3 scaffold_12928:7048460-7048784 + CAATC-CGC------CGCGG-------------ATGCTGGGCGCCA--TGCCG--------------------------------------------------------------------------------------------------------------------------ATGGCCCGTTTCCT-------------------------GATGCCGCCGGGTAATGCACATGCT---------------------CATGCACATGCA--------------------------------------------------------------------------CATGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATG--GCCACATTGATGGCGGCACCGCCAGGTGTGGTTGCAACGCCGGTGGCTGCTTGCATTTTG---------------------------GCCACGGCCACGCCTCTAAAT---A--------------------------G------------------------------------------------------------------------------------------------------------C------CA---------TCATCAGCTGACGCCGAGCGT------------------CAT---------------------------GCAACAGCAACAGCAGCAGCAACAA-------------------------------------------------------------------------------------------------------CAACAAC------------------------------AACAAACACTAACACAGAACAAAACTGCATTCATT------CCAGGCCAATATGCACCACCAC-------------------------------------AACCACCGTCAGCAC------------------------------------------------CCACACAACAACAA--------------------------CAA
droGri2 scaffold_14853:3558067-3558358 - dgr_156 CAGTC-CGC------AGCGA-------------ATGATGGGTGGAA--TGTCGAT--------------------------------------------------------------------------------------G--CAGCAGC----------------------------------------------CGCAGCG----TTTCCTGATGCCGCCGGGTAATAATAATGCAC---------------------TT---CATACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCATCATTTG--GCCAGTTTGATGG---CACCGCCGGGCGTTGTGGCAACCCCCTTGGCAGCCTGCATACTG---------------------------T----------------------------------------CGTCCCAACAGCAGCA-------------------------------------------------------------------------------------------------------------GCA------------------------------TCAA------------------CA---------------------GCTGCAGCAGCAACAGCAGCAGCAACAA-------------------------------------------------------------------------------------------------------CAACAAC------------------------------AACAAGCACTAACACTGAACAAAACTGCATTCATT------CCAGGCCAATATACACCA--------------------------------------------------CAACAG------------------------------------------------CA--ACAACAACAA--------------------------CAA
droWil2 scf2_1100000004909:3305620-3305956 - AGCG---GC------AGCCA-------------ATGGTGCA---AG--TGGCAGTGTGACGGCTTCGGCCAGTGGCAGCTCTGGCAGCCATCCCGGCACCCCGACTTCGCTGCATGGCCTAAATGCCACAA----------------------------------------------------------------------------------------------------------------------------------------------------------GCACGCCCAGC----------------------------------------------------------------------------------------------------AGCACTAGTTTGCTGGTGGGTGGCGGTCTGCACCTGGCCTCGCCGCAC--------------------------CAGATGGTCGCCGCGGGCGGCTCGCCGGTGATGCT----------------TC--------------------------------------------------------------------------------------------ATCAGC-------------A--------------------CCAACAGCAGCA----------------------------------------------G---------CAACAGCAACAA---------------------------------CAACAGCAGCA------------------------------GCAG------------------CA---------------------GCAGCAACAACAACAACAACAGCAACAG------------------------------------------------CAGCAACAACAGCAACA--------------------------------------------------------------------------------------------------ACATCATCAACA-------------------------------------------------------------------CCAATCCCAACACCAA---------------------------------------------CA--ACAGCAGCAA--------------------------CAT
dp5 XR_group8:1663176-1663460 + TCACG-CTC------AACAG-C-----------------------A--TGCCGCT--------------------------------------------------------------------------------------GCCCAGCAGCAGC----AGCACC----------------AC---------------------CATCCCCATGGACC---GCCCCATAGCCA---CCCAG---------------------CG---CATCCA--------------------------------------------CACCCCCACTCGCACCAGCACCCG------CAC----------------------------------------C------C-------------------------------------------GCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACACCCA----C----------CC----------------------------------------------A---------CAGCAGCAACAG------C---------------------------------------------------------------------AA------------------CAGCAGCAGCAGCAACATCATCATCACCAGCAACAGCAGCAGCAGCAGCAA---------------------------------------------------------CACGCCCA--------------------------------------------------------------------------------------------------ACAGCAGCAACA-------------------------------------------------------------------TCACGCCGCCCA----ACTGGCCCACACCCTCTCCTCGGCAGCGGCAGCCCCCGCCCCCAACA--ACAACAACAG--------------------------CGG
droPer2 scaffold_11:2666736-2667012 - CAGGC--CC------AGCAG-C----------------------------------------------------------------------------------------------------------------------------------------------AGCAA-------------------------------------------------------------------------------CAGGCCCAGGCGCAGGCGCAGGCC--------------------------------------------------------------------------CAGGCACAGGCCCAGCAGTT---------------------GGCACAGG-C-------------------------------------------TCAA--------------------------CAGATGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCAGCAGCAGCA-------------------------------------------------------------------G------C---------TGGCGGTTGCAGTGCATCACCAGCAACA------------------------------GCAGGCGGCAGCCGTTGTCGTACA---------------------GCAGCAGCAGCAACAGCAGGCGCAACAA------------------------------------CAGCAACAGCAGCAGCAGCAGGCGGCGGTAAAG-----------------------------------------------------------------------------------------------------A------------------------------TGCAGCTGACTGGCGGTACGCCCACCTTTAC--------A-TTCAGCGCCATGCCCA---------------------------------------------CG--GTGACGGCAG--------------------------CCA
droAna3 scaffold_13417:2252296-2252590 + CGGCG-GT-------------------------------------G--TGCCGCC--------------------------------------------------------------------------------------G--CAGCAACAGC-------AGCAGCGCATGGGCCTGGCCGGGATGCAGCCGCTAATTCAGCG----CTATGGAAT---GCCGGGTAATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA-------------------------------------------------------------------------------A-CCGCACAGCACCTG--GCC---TTGATGAGTACGCC------AGTGGGTGCTGCTCCCACGGCAGCCTGTCTGCTA---------------------------CCCCTGTCCCT-------------GC---CGATTCACCCA----T---------------------------------------------------------------------------------------------------------------------------C------------------------------CCAC---------------------------------------------CCCCAGCAACAGCA---GCAACAA-------------------------------------------------------------------------------------------------------------------CAGA------------------AACAGCAACAGCAAACACTGAACAAACCAACATTCATTCCAATTCCAGGCCAGTATCCGCCA---------------------------------------------------------------------------------------------------------------------------------ACCCAGCCACCCAATCAG
droBip1 scf7180000395954:117834-118092 + TCCAC-ACG------GCC-AAC-----------------------------------------------------------------------------------------------------------------------------------------------AGGCACTTCCACATCCT------------------------------------------------------------------------------CACACGCATCCA--------------------CATC---C-----------A----CATCCACATCCCCATCCGCATTCGCACTCGCAT----------------------------------------C------C-------------------------------------------ACA-CCATCTGCAG-CCAGGAACACCCAC-----------------------------------------------------------------TCGGAGTCC------AGCG------------------------------------------------------------AT----------------------------G------GCTCCCCATCCGCATCA-------------------------------------------------------------------------------------------------------------------------------------------------T------------------TA---------------------TCC---GCCGCATCCGCACCATCAGCCG---------------CCGCC---------------------GCCA------------------------CATCACGGCCATCCGCATGCACATCATTACGCCT-------ACGCCCACCAGCAGCAGCAGCAGCAGCCGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCCGCAC--------------------------TAC
droKik1 scf7180000302809:502194-502447 - CCAGC-AGC------AACAT-C------------CGTTG-CCGCTG--TGCCGAC--------------------------------------------------------------------------------------G---AGCGGC----------------------------------------------GG------------CAGCTT---GCCGGACAGTCC----------------------CGCCCACG---------------------------------------------------------------------------------------------------------------AATCGCACTCCCACGAG--------------------------------------------------------------------------------TCCAACTCC--------------------------------------------------------------------------------------GCGACCGCCTCCGCGCCG---------------------------ACCACGCCCTCGCCGGCAGGCAGCGTCACCAGCG------CCGCCCCCACAGCAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGCAGCAGCGTCGGTAGCAGCAACAG---------------CAGGA---------------------GCAA----------------------------------------------------------CTGCAGC------------------------------GACAACCGCCGTTA---------GCGA--------------------CAGCAACAA-----------------------------------------------------CAACCT------------------------------------------------GA--ACACCAGCAA--------------------------CAG
droFic1 scf7180000453782:694697-694969 - GCCGG-G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGCTGAC---CCCCGGCGACCTGTTCGCCCAGCTGCCACACCCACCGCACCC--------------------------------------------------------------------GATGCCCGCCCACCTGCAC----------------------------------------G------C-------------------------------------------CCAG--------------------------CTGATGGCCGCCGCCGCCGCCTCGCTGGCCATGCAGT--------------CC--------------------------------------------------------------------------------------------GCCCGG-------------TCCGCCGGCTCGCCGA----GCCAGCAGCAGCA-------------------------------------------------------------------G------C------TGCAG---------------CAGCAACAACT------------------------------GCAG------------------CA---------------------GCAGCACCAGCAACTGCAGCAGCAGCAG------------------------------------CAGCAAATGCAGCAGCAGCAGATGGCGCTGCAG-----------------------------------------------------------------------------------------------------C------------------------------TG---------------------------------------C------------------------------------------------TGCCGCC-GCAACTGCCAGGCAGCAA--------------------------CAG
droEle1 scf7180000491013:496338-496699 + CCAAT-TCC------GGCGG-TAATTCAC----------------------AA--------------------------GCCGGCAGCCATCCCGGCACCCCCACTTCGTTGCATGCGCACAGCGCCAATG----------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTCCAGC----------------------------------------------------------------------------------------------------AGC---------CTGCTGGGCGGCGGTCTGCACCTGGCCACGCCGCAC--------------------------CAGATGGTCGCCGCGGGCGGTTCGCCGGTGATGTT---------------------------------------------------------GCAGC----------------------------------------------------------------------------------------------------------------------------ATCAGCAGCATTTGCAGCAGCAGCAACAGCAGCAGCAGCAACATCATCATCAGCAGCAGCAGCAA---CACCAACAGCACCAGCAACA------------------------------CCAA------------------CA---------------------CCAGCAGCAGCA---------GCAACAC---------------------------------------------CAGCAGCAGCAGCAG---------CAACAACACCAGCAAC--------------------------------------------------------------------------------------------------------ATTTGCAGCAG-------------------------------------------------CAACACCAA---------------------------------------------CA--GCAGCAGCAACATCTCCAGCAGTTTGC----AC-AGCAG
droRho1 scf7180000769726:17091-17363 + ACAGTTGCC------AGTGC-C----------------------------------------------------------------------------------------------------------------------------------------------AGGA--------------------------------------------------------------------------------CATCCTCATCCTCATCCGCATCCA--------------------------------------------------------------------------CATCCACATCCGCATCATC----------------------ATCACCATCA-----------------------------------------------CCATGGGGGGGCGGGGCACGCCCACT-------------------------------------TTCCGCATCCCGCA--TTT---CT-------------------------------------------------------------------------------------------------------------AACG---------CAT---------CA----------------------------------------------------------------------------------------------------------------------------ACTGCCGCCGCA------TCAG------------------CA---------------------GCAGCAGCAGCAGCAGCATGC---ACAA---------------C---------------------------------------------------------------AGCAAC-------------------------ATGTACAGCAGCAACACCAGCAACATCAGC-----------------AGCATCCCGG--------------------CAATAGTTGTCA------ACC--------------------------------------------------------GCAAACCGCATCCTC----------------GTC-GTCGTCACCTGGCAGC---------------ACA--------ATTAG
droBia1 scf7180000302126:3702263-3702572 + TGGCG-TCC------AGCAG-C----------------------------------------------------------------------------------------------------------------------------------------------AGCGCATGGGCATGGCCGGAATGCAGCCGCCGCCGCAGCG----ATACGGCAT---GCCGGGTAATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA-------------------------------------------------------------------------------C-AACCGCAGCACCTG--GCT---CTGATGAGCGCACC------AGTGGGTGCTGCTCCCACCGCCGCCTGCCTCCTCCCACTAACCGTGCCCGTCTCCCCACTCACCCTGTCCAT-------------GCCACAAGCCCATCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AG------------------CCA---------------------------------------------TC-------------------------------------------------------------------------------------------------------------------AAGCCCCCCATCAGCAGCAGAAGCAGCCACAGCAACAGCAGACACTGAACAATCCGACATTCATTCCAATTCCAGGCCAGTACCCGCCA---------------------------------------------------------------------------------------------------------------------------------ACTCAGCCACCC---AAC
droTak1 scf7180000415363:102993-103256 + CACAC-AT-------------------------------------A--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCA--------------------------------------------------CATCCACATCCAGATCCA------------GAGGCACACTTCCAACTGTTTTGACGTGGTCGAGTTCCAATGGCGCTGG-C-------------------------------------------ACCA--------------------------CCGAATGCTGCAG-CGC---------AGCCTTGCAGC--------------CA-----------------TCC------AGC----------------------------------------------------------------------------------GGCGACG-CG------TTGCATGTGCAGCAGCA-------------------------------------------------------------------G------------AAGCAG---------------GAGCAGCAACA------------------------------TCAA------------------CA---------------------GCAGCAACAGCAACAGCAGCGGCAACAG------------------------------------CAGCAACAACAGCAGCAGCAGGATACGAAAGCG-----------------------------------------------------------------------------------------------------A------------------------------GG---------------------------------------A------------------------------------------------TGACAAC-GACCACACGCAAAAGCAG--------------------------AGG
droEug1 scf7180000409901:89295-89586 + TGGCG-TTC------AGCAG-C----------------------------------------------------------------------------------------------------------------------------------------------AGCGCATGACCATGGCCGGAATGCAGCCACCGCCACAGCG----ATATGGCAT---GCCGGGTAATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA-------------------------------------------------------------------------------C-CACCGCAGCACCTA--GCT---CTGATGAGCACGCC------AGTGGGTGCTGCTTCCACCGCCGCCTGCCTCCTTCCACTAACCGTTCCCGTGTCCCCGCTAACCCTGTCAAT-------------ATCACAAGCCCATTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AA------------------CCA---------------------------------------------TC-------------------------------------------------------------------------------------------------------------------AAGCCCATC------------------AGCAACAACAGCAAACACTGAACAATCCGACATTCATTCCAATTCCAGGCCAGTACCCGTCA---------------------------------------------------------------------------------------------------------------------------------ACTCAGCCACCC---AAC
dm3 chr2R:6877557-6877849 - ACACC-CGC------TACAG-C--AATCCTGCG----------CTT--CACCA--------------------------GCCAG-AG---------C------------------------AATCCCACAATGACGCAACTG--CAGCAGCAGC-------AGC---------------------------------AG-------------------------------------------------------------CA-------------------------------------------------GCTGG-------------------------------CC----------------------------------------G------T-------------------------------------------CCAG--------------------------CA---------------------------------------------------TTT----G-------------------------------------------------------------------------------------------------------------AGCA---------TAT---------CGCCACAGGCCCTTGGCCACAGCAACATCGGCAGCAATTCGC------------------------------------------CCAA---------------GAGCAGCAGCA------------------------------GCAG------------------TA---------------------GCA------------------GCAACAGCAGCAATAGCAGCAGTAGCAGCCACAGTAGCAGCAGCAGCAT---------------CA--------------------------------------------------------------------------------------------------------GCGG--------------------CAGCAGCGACCA------GCCAACACACAGC-----------AACATTCCGCGCAGCACCATCGT---------------------------------------------------CCGCCTGACGACGG---------------------CC-AACGG
droSim2 3r:19974572-19974834 + TGTTT-CCC------GCCCA-GAAGGCACTGGA----------CGT--TCACA--------------------------TCC----------------------------------------------------------------------------------AGCG--------------------------------------------------------------------------------------------------CATTCACATGACCCTGAAAACGGATCCATCGGGCACTGTGAAGGTGGAGG-------------------------------AC----------------------------------------G------T-------------------------------------------TCAG--------------------------CTGCAGATC-------------------------------------------------------------ACC------AGCGAACGCAGGCCACGGGGTAGGCCGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCCA---------------AGGCTACAGCTTCAACAGCATCAACTGCAGCCGCAGCAGAA------------------GTT---------------------------------------------GCAAGTG---------------------------------------CAGCAGCAGCAGCAGCAAAAGGCACT--------------------------------------------------------------------------------------------------TCAGCAACTACC-------------------------------------------------------------------CCAAGCACAACAC------------------------------------------------CA--CCAACAGCAA--------------------------CAG
droSec2 scaffold_4:5418009-5418317 + CCACA--ACAGCGCCAACAA-A-----------ATGTCGCC---CATGTGC--TC--------------------------------------------------------------------------------------------------------------------------ACCTG---------------------G----CTCCCTCAC---CCCCGGCGACCTCTTTGCCCAGCTCCAGCACCCGCCGCCCCA--------------------------------------------------------------------GCTGCCGCCGCACCTGCAC----------------------------------------G------C-------------------------------------------TCAG--------------------------TTCATGGCC---GCCGCCGCCTCCCTGGCCATGCAGT--------------CC--------------------------------------------------------------------------------------------GCCCGC-------------ACCGCCAGCTCGCCCA----GCCAACAGCAGCA-------------------------------------------------------------------G------C------ACCAG---------------CAGCAGCAACA------------------------------CCAC------------------CA---------------------GCAGCAGCAACACCACCAGCAGCAGCAA------------------------------------CTGCAGCAGCAGCAGCATCAGATGGCCAT--------------------------------------------------------------------------------------------------GCAGCAAC------------------------------TG---------------------------------------C------------------------------------------------TGCCGCC-GCAACTGCCCGGCAGCAA--------------------------CAG
droYak3 3L:9059396-9059672 + CCATC-TCA------ACCAG-C--------------------------------T--------------------------------------------------------------------------------------G---AGCAGCCTCAGCCAGCACT----------------AC---------------------------------------------------ACTGCGCCGTATCACCATCCGCATTCGCATCCGCACTCG--------------------------------------------------------------------------CATTCGCATCCGCATCATC----------------------ACTACCAGCA---------------------------------------------------------------------------------------------------------------------------------------------GCACTATCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACATCTCCAGCAGCAGCAGCAGCACGCCCAGCAGCAACACCAGCAACA------------------------------TCAG------------------CA---------------------GCAGCAGCAGCAGCAGCAGCAGCAACAG---------------CAGCA---------------------GCAA----------------------------------------------------------CAGCAGC--------------------------------------------------AGCAGCACTGGGACTACTATGCCAGG-CAGCAGCAG-----------------------------------------------------CAACAT------------------------------------------------CA--ACAGCAGCAG--------------------------CAG
droEre2 scaffold_4690:4375554-4375845 - TGGGA-TTC------AGCAG-C----------------------------------------------------------------------------------------------------------------------------------------------CACGCATGGGCATGGCCGGAATGCAGCCGCCGCCGCAACG----ATACGGCAT---GCCGGGTAATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA-------------------------------------------------------------------------------C-TACCGCAGCACCTG--GCT---CTGATGAGCACGCC------AGTGGGTGCTGCTCCCACCGCCGCCTGCCTTCTTCCATTAACCGTTCCCGTAACCCCGCTCACCCTCTCCAT-------------ACCGCAAACTCATCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AG------------------CCA---------------------------------------------TC-------------------------------------------------------------------------------------------------------------------AAGTACATC------------------AACAACAACAGCAAACACTGAGCAATCCAACATTCATTCCAATTCCAGGCCAGTACCCGGCA---------------------------------------------------------------------------------------------------------------------------------ACTCAGCCACCC---AAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CAATC-CAC------AACGG-------------ATGCTGGG---CA--TGTCGAT--------------------------------------------------------------------------------------------------------------------------GCCAC---------------------G----GTTTCTGAT---TCCCGGTAATGCACATGCAC---------------------ATCCA--------------------------------------------------CATCCACATCCACATGTCCATGCGCACTCGCAT----------------------------------------G------C-------------------------------------------A--------------------------------------------------------------------------CATATG--GCCACGTTGATGGCGGGGCCGCCGGCAGTTGTTGCGGCTCCAGTGGCTGCTTGTATTTTG---------------------------------GCCAC-------------GCCACAGGCC------ACGCCCCGTCATCATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCAGCAGCAGCAGCAGCAGCAACAA---------------AAGCC---------------------ACAA----------------------------------------------------------CAGCAGC------------------------------AACAATCACTAACACAAAACAAAACTGCATTCATT------CCAGGCCAATATGCACCACAAG-------------------------------------CACCACCGTCAACAC------------------------------------------------CCACACAACAGCAA--------------------------CAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGCACCACAAG-------------------------------------CACCAC....................................................................................................2111.001100000
....C-CAC------AACGG-------------ATGCTGGG---CA--TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................19200.051000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCAGCAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................24200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................18200.051000010
droVir3
CAATC-CGC------CGCGG-------------ATGCTGGGCGCCA--TGCCG--------------------------------------------------------------------------------------------------------------------------ATGGCCCGTTTCCT-------------------------GATGCCGCCGGGTAATGCACATGCT---------------------CATGCACATGCA--------------------------------------------------------------------------CATGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATG--GCCACATTGATGGCGGCACCGCCAGGTGTGGTTGCAACGCCGGTGGCTGCTTGCATTTTG---------------------------GCCACGGCCACGCCTCTAAAT---A--------------------------G------------------------------------------------------------------------------------------------------------C------CA---------TCATCAGCTGACGCCGAGCGT------------------CAT---------------------------GCAACAGCAACAGCAGCAGCAACAA-------------------------------------------------------------------------------------------------------CAACAAC------------------------------AACAAACACTAACACAGAACAAAACTGCATTCATT------CCAGGCCAATATGCACCACCAC-------------------------------------AACCACCGTCAGCAC------------------------------------------------CCACACAACAACAA--------------------------CAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....C-CGC------CGCGG-------------ATGCTGGGCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002101000000000000000000000000000000000000000000000000000000000000
.................................ATGCTGGGCGCCA--TGCCG--------------------------------------------------------------------------------------------------------------------------ATGGCCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000010000000000000000000000000000000000000000000
...................................................CG--------------------------------------------------------------------------------------------------------------------------ATGGCCCGTTTCCT-------------------------GATGCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-------------------------------------------------------------------------------------------------------CAACAAC------------------------------AACAAACACTAACAC...............................................................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATG--GCCACATTGATGGCGGCACCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAC-------------------------------------AACCACCGTCAGCAC------------------------------------------------CC.........................................2111.001000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------------------GCAACAGCAACAGCAGCAGCAA.............................................................................................................................................................................................................................................................................................................................................................2430.331000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000020000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAA-------------------------------------------------------------------------------------------------------CAACA..............................................................................................................................................................................................................................................19200.102000000000000000000000000000000002000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACAA-------------------------------------------------------------------------------------------------------C..................................................................................................................................................................................................................................................21200.102000000000000000001000000000000100000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAA-------------------------------------------------------------------------------------------------------CAACAAC------------------------------AAC...........................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAACAA-------------------------------------------------------------------------------------------------------CAAC...............................................................................................................................................................................................................................................20200.051000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
CAGTC-CGC------AGCGA-------------ATGATGGGTGGAA--TGTCGAT--------------------------------------------------------------------------------------G--CAGCAGC----------------------------------------------CGCAGCG----TTTCCTGATGCCGCCGGGTAATAATAATGCAC---------------------TT---CATACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCATCATTTG--GCCAGTTTGATGG---CACCGCCGGGCGTTGTGGCAACCCCCTTGGCAGCCTGCATACTG---------------------------T----------------------------------------CGTCCCAACAGCAGCA-------------------------------------------------------------------------------------------------------------GCA------------------------------TCAA------------------CA---------------------GCTGCAGCAGCAACAGCAGCAGCAACAA-------------------------------------------------------------------------------------------------------CAACAAC------------------------------AACAAGCACTAACACTGAACAAAACTGCATTCATT------CCAGGCCAATATACACCA--------------------------------------------------CAACAG------------------------------------------------CA--ACAACAACAA--------------------------CAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................GC----------------------------------------------CGCAGCG----TTTCCTGATGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAGCAACAA-------------------------------------------------------------------------------------------------------CA.................................................................................................................................................................................................................................................27200.05110
droWil2
AGCG---GC------AGCCA-------------ATGGTGCA---AG--TGGCAGTGTGACGGCTTCGGCCAGTGGCAGCTCTGGCAGCCATCCCGGCACCCCGACTTCGCTGCATGGCCTAAATGCCACAA----------------------------------------------------------------------------------------------------------------------------------------------------------GCACGCCCAGC----------------------------------------------------------------------------------------------------AGCACTAGTTTGCTGGTGGGTGGCGGTCTGCACCTGGCCTCGCCGCAC--------------------------CAGATGGTCGCCGCGGGCGGCTCGCCGGTGATGCT----------------TC--------------------------------------------------------------------------------------------ATCAGC-------------A--------------------CCAACAGCAGCA----------------------------------------------G---------CAACAGCAACAA---------------------------------CAACAGCAGCA------------------------------GCAG------------------CA---------------------GCAGCAACAACAACAACAACAGCAACAG------------------------------------------------CAGCAACAACAGCAACA--------------------------------------------------------------------------------------------------ACATCATCAACA-------------------------------------------------------------------CCAATCCCAACACCAA---------------------------------------------CA--ACAGCAGCAA--------------------------CATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------CAACAGCAGCA------------------------------GCAG------------------CA---------------------GCA...................................................................................................................................................................................................................................................................................................................................................................................21200.40800071
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCAACA...........................................................................................................................................................................................................................................................................................................................................................22200.20400040
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------A--------------------CCAACAGCAGCA----------------------------------------------G---------CAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.17100001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-------------A--------------------CCAACAGCAGCA----------------------------------------------G---------CAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.11100001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAG------------------------------------------------CAGCAACAA.................................................................................................................................................................................................................................................................................................23200.10202000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA----------------------------------------------G---------CAACAGCAACAA---------------------------------CAACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200011
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---------------------------------CAACAGCAGCA------------------------------GCAG------------------CA---------------------GCA...................................................................................................................................................................................................................................................................................................................................................................................25200.10200020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAACAACAACAGCAACAG------------------------------------------------C.........................................................................................................................................................................................................................................................................................................29110.09101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAGCAACAG------------------------------------------------CAGCAAC...................................................................................................................................................................................................................................................................................................27130.08100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAACAG------------------------------------------------CAGCAA....................................................................................................................................................................................................................................................................................................27160.06100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAG------------------------------------------------CAGCAACAA.................................................................................................................................................................................................................................................................................................26190.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCA------------------------------GCAG------------------CA---------------------GC....................................................................................................................................................................................................................................................................................................................................................................................19200.05100001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAACAG------------------------------------------------CAGCAAC...................................................................................................................................................................................................................................................................................................25200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAACAACAACAGC...............................................................................................................................................................................................................................................................................................................................................................23200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAG------------------------------------------------CAGCAACA..................................................................................................................................................................................................................................................................................................25200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAA---------------------------------CAACAGCAGCA------------------------------GCAG------------------CA---------------------......................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA----------------------------------------------G---------CAACAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-------------A--------------------CCAACAGCAGCA----------------------------------------------G---------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCAACAG------------------------------------------------CA........................................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAA---------------------------------CAACAGCAGCA------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAACAG------------------------------------------------CAGCA.....................................................................................................................................................................................................................................................................................................26200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCAACAG------------------------------------------------CAGCAAC...................................................................................................................................................................................................................................................................................................23200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAACAG------------------------------------------------CAGCAACA..................................................................................................................................................................................................................................................................................................26200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCA----------------------------------------------G---------CAACAGCAACAA---------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------------CAACAGCAGCA------------------------------GCAG------------------CA---------------------GCAGCA................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAG------------------------------------------------CAGCAAC...................................................................................................................................................................................................................................................................................................22200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAACAACAGCAACAG------------------------------------------------G.........................................................................................................................................................................................................................................................................................................27200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------A--------------------CCAACAGCAGCA----------------------------------------------G---------CAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
dp5
TCACG-CTC------AACAG-C-----------------------A--TGCCGCT--------------------------------------------------------------------------------------GCCCAGCAGCAGC----AGCACC----------------AC---------------------CATCCCCATGGACC---GCCCCATAGCCA---CCCAG---------------------CG---CATCCA--------------------------------------------CACCCCCACTCGCACCAGCACCCG------CAC----------------------------------------C------C-------------------------------------------GCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACACCCA----C----------CC----------------------------------------------A---------CAGCAGCAACAG------C---------------------------------------------------------------------AA------------------CAGCAGCAGCAGCAACATCATCATCACCAGCAACAGCAGCAGCAGCAGCAA---------------------------------------------------------CACGCCCA--------------------------------------------------------------------------------------------------ACAGCAGCAACA-------------------------------------------------------------------TCACGCCGCCCA----ACTGGCCCACACCCTCTCCTCGGCAGCGGCAGCCCCCGCCCCCAACA--ACAACAACAG--------------------------CGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---------------------------------------------------------CACGCCCA--------------------------------------------------------------------------------------------------ACAGCAGC...............................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---------------------------------------------------------CACGCCCA--------------------------------------------------------------------------------------------------ACAGCAG................................................................................................................................................................................2011.0010100000000
....G-CTC------AACAG-C-----------------------A--TGCCGCT--------------------------------------------------------------------------------------GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCCTCTCCTCGGCAGC.............................................................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACACCCTCTCCTCGGC................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAA---------------------------------------------------------CACGCC...........................................................................................................................................................................................................................................................................................2020.5010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCATCATCACCAGCAACAGCA.......................................................................................................................................................................................................................................................................................................................................................................2420.5010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACCAGCAACAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................2330.3310100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------C---------------------------------------------------------------------AA------------------CAGCAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................19200.1530300000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACATCATC.......................................................................................................................................................................................................................................................................................................................................................................................21100.1010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAACAGCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCAGCAA---------------------------------------------------------C................................................................................................................................................................................................................................................................................................23200.0510001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAG------C---------------------------------------------------------------------AA------------------CAGCAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAG------C---------------------------------------------------------------------AA------------------CAGCAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAG------C---------------------------------------------------------------------AA------------------CAGCAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAG------C---------------------------------------------------------------------AA------------------CAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAG------C---------------------------------------------------------------------AA------------------CAGCAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................20200.0510000001000
droPer2
CAGGC--CC------AGCAG-C----------------------------------------------------------------------------------------------------------------------------------------------AGCAA-------------------------------------------------------------------------------CAGGCCCAGGCGCAGGCGCAGGCC--------------------------------------------------------------------------CAGGCACAGGCCCAGCAGTT---------------------GGCACAGG-C-------------------------------------------TCAA--------------------------CAGATGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCAGCAGCAGCA-------------------------------------------------------------------G------C---------TGGCGGTTGCAGTGCATCACCAGCAACA------------------------------GCAGGCGGCAGCCGTTGTCGTACA---------------------GCAGCAGCAGCAACAGCAGGCGCAACAA------------------------------------CAGCAACAGCAGCAGCAGCAGGCGGCGGTAAAG-----------------------------------------------------------------------------------------------------A------------------------------TGCAGCTGACTGGCGGTACGCCCACCTTTAC--------A-TTCAGCGCCATGCCCA---------------------------------------------CG--GTGACGGCAG--------------------------CCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGGCGGCGGTAAAG-----------------------------------------------------------------------------------------------------A------------------------------TGCAG............................................................................................................................................2711.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGGCGGCGG..........................................................................................................................................................................................................................................................................................2170.141010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGGCG..............................................................................................................................................................................................................................................................................................2180.131010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------------------------------------CAGCAACAGCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................25150.071001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA------------------------------------CAGCAACAGCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................24190.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------------------------------------CAGCAACAGCAGCAGC......................................................................................................................................................................................................................................................................................................21200.051001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------------------CAGCAACAGCAGCAGCAG....................................................................................................................................................................................................................................................................................................21200.051001000
droAna3
CGGCG-GT-------------------------------------G--TGCCGCC--------------------------------------------------------------------------------------G--CAGCAACAGC-------AGCAGCGCATGGGCCTGGCCGGGATGCAGCCGCTAATTCAGCG----CTATGGAAT---GCCGGGTAATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA-------------------------------------------------------------------------------A-CCGCACAGCACCTG--GCC---TTGATGAGTACGCC------AGTGGGTGCTGCTCCCACGGCAGCCTGTCTGCTA---------------------------CCCCTGTCCCT-------------GC---CGATTCACCCA----T---------------------------------------------------------------------------------------------------------------------------C------------------------------CCAC---------------------------------------------CCCCAGCAACAGCA---GCAACAA-------------------------------------------------------------------------------------------------------------------CAGA------------------AACAGCAACAGCAAACACTGAACAAACCAACATTCATTCCAATTCCAGGCCAGTATCCGCCA---------------------------------------------------------------------------------------------------------------------------------ACCCAGCCACCCAATCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................ATGGGCCTGGCCGGGATGCAGCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
........................................................................................................................................................................................................AGCG----CTATGGAAT---GCCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.....................................................................................................................................................................GCGCATGGGCCTGGCCGGGATGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCCCACGGCAGCCTGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................AGCGCATGGGCCTGGCCGGGATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...............................................................................................................................................................................CTGGCCGGGATGCAGCCGCTAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................................G--TGCCGCC--------------------------------------------------------------------------------------G--CAGCAACAGC-------AGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTACGCC------AGTGGGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droBip1
TCCAC-ACG------GCC-AAC-----------------------------------------------------------------------------------------------------------------------------------------------AGGCACTTCCACATCCT------------------------------------------------------------------------------CACACGCATCCA--------------------CATC---C-----------A----CATCCACATCCCCATCCGCATTCGCACTCGCAT----------------------------------------C------C-------------------------------------------ACA-CCATCTGCAG-CCAGGAACACCCAC-----------------------------------------------------------------TCGGAGTCC------AGCG------------------------------------------------------------AT----------------------------G------GCTCCCCATCCGCATCA-------------------------------------------------------------------------------------------------------------------------------------------------T------------------TA---------------------TCC---GCCGCATCCGCACCATCAGCCG---------------CCGCC---------------------GCCA------------------------CATCACGGCCATCCGCATGCACATCATTACGCCT-------ACGCCCACCAGCAGCAGCAGCAGCAGCCGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCCGCAC--------------------------TACSizeHit CountTotal NormTotal
No Reads
droKik1
CCAGC-AGC------AACAT-C------------CGTTG-CCGCTG--TGCCGAC--------------------------------------------------------------------------------------G---AGCGGC----------------------------------------------GG------------CAGCTT---GCCGGACAGTCC----------------------CGCCCACG---------------------------------------------------------------------------------------------------------------AATCGCACTCCCACGAG--------------------------------------------------------------------------------TCCAACTCC--------------------------------------------------------------------------------------GCGACCGCCTCCGCGCCG---------------------------ACCACGCCCTCGCCGGCAGGCAGCGTCACCAGCG------CCGCCCCCACAGCAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGCAGCAGCGTCGGTAGCAGCAACAG---------------CAGGA---------------------GCAA----------------------------------------------------------CTGCAGC------------------------------GACAACCGCCGTTA---------GCGA--------------------CAGCAACAA-----------------------------------------------------CAACCT------------------------------------------------GA--ACACCAGCAA--------------------------CAGSizeHit CountTotal NormTotal
No Reads
droFic1
GCCGG-G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGCTGAC---CCCCGGCGACCTGTTCGCCCAGCTGCCACACCCACCGCACCC--------------------------------------------------------------------GATGCCCGCCCACCTGCAC----------------------------------------G------C-------------------------------------------CCAG--------------------------CTGATGGCCGCCGCCGCCGCCTCGCTGGCCATGCAGT--------------CC--------------------------------------------------------------------------------------------GCCCGG-------------TCCGCCGGCTCGCCGA----GCCAGCAGCAGCA-------------------------------------------------------------------G------C------TGCAG---------------CAGCAACAACT------------------------------GCAG------------------CA---------------------GCAGCACCAGCAACTGCAGCAGCAGCAG------------------------------------CAGCAAATGCAGCAGCAGCAGATGGCGCTGCAG-----------------------------------------------------------------------------------------------------C------------------------------TG---------------------------------------C------------------------------------------------TGCCGCC-GCAACTGCCAGGCAGCAA--------------------------CAGSizeHit CountTotal NormTotal
No Reads
droEle1
CCAAT-TCC------GGCGG-TAATTCAC----------------------AA--------------------------GCCGGCAGCCATCCCGGCACCCCCACTTCGTTGCATGCGCACAGCGCCAATG----------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTCCAGC----------------------------------------------------------------------------------------------------AGC---------CTGCTGGGCGGCGGTCTGCACCTGGCCACGCCGCAC--------------------------CAGATGGTCGCCGCGGGCGGTTCGCCGGTGATGTT---------------------------------------------------------GCAGC----------------------------------------------------------------------------------------------------------------------------ATCAGCAGCATTTGCAGCAGCAGCAACAGCAGCAGCAGCAACATCATCATCAGCAGCAGCAGCAA---CACCAACAGCACCAGCAACA------------------------------CCAA------------------CA---------------------CCAGCAGCAGCA---------GCAACAC---------------------------------------------CAGCAGCAGCAGCAG---------CAACAACACCAGCAAC--------------------------------------------------------------------------------------------------------ATTTGCAGCAG-------------------------------------------------CAACACCAA---------------------------------------------CA--GCAGCAGCAACATCTCCAGCAGTTTGC----AC-AGCAGSizeHit CountTotal NormTotal
No Reads
droRho1
ACAGTTGCC------AGTGC-C----------------------------------------------------------------------------------------------------------------------------------------------AGGA--------------------------------------------------------------------------------CATCCTCATCCTCATCCGCATCCA--------------------------------------------------------------------------CATCCACATCCGCATCATC----------------------ATCACCATCA-----------------------------------------------CCATGGGGGGGCGGGGCACGCCCACT-------------------------------------TTCCGCATCCCGCA--TTT---CT-------------------------------------------------------------------------------------------------------------AACG---------CAT---------CA----------------------------------------------------------------------------------------------------------------------------ACTGCCGCCGCA------TCAG------------------CA---------------------GCAGCAGCAGCAGCAGCATGC---ACAA---------------C---------------------------------------------------------------AGCAAC-------------------------ATGTACAGCAGCAACACCAGCAACATCAGC-----------------AGCATCCCGG--------------------CAATAGTTGTCA------ACC--------------------------------------------------------GCAAACCGCATCCTC----------------GTC-GTCGTCACCTGGCAGC---------------ACA--------ATTAGSizeHit CountTotal NormTotal
No Reads
droBia1
TGGCG-TCC------AGCAG-C----------------------------------------------------------------------------------------------------------------------------------------------AGCGCATGGGCATGGCCGGAATGCAGCCGCCGCCGCAGCG----ATACGGCAT---GCCGGGTAATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA-------------------------------------------------------------------------------C-AACCGCAGCACCTG--GCT---CTGATGAGCGCACC------AGTGGGTGCTGCTCCCACCGCCGCCTGCCTCCTCCCACTAACCGTGCCCGTCTCCCCACTCACCCTGTCCAT-------------GCCACAAGCCCATCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AG------------------CCA---------------------------------------------TC-------------------------------------------------------------------------------------------------------------------AAGCCCCCCATCAGCAGCAGAAGCAGCCACAGCAACAGCAGACACTGAACAATCCGACATTCATTCCAATTCCAGGCCAGTACCCGCCA---------------------------------------------------------------------------------------------------------------------------------ACTCAGCCACCC---AACSizeHit CountTotal NormTotal
No Reads
droTak1
CACAC-AT-------------------------------------A--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCA--------------------------------------------------CATCCACATCCAGATCCA------------GAGGCACACTTCCAACTGTTTTGACGTGGTCGAGTTCCAATGGCGCTGG-C-------------------------------------------ACCA--------------------------CCGAATGCTGCAG-CGC---------AGCCTTGCAGC--------------CA-----------------TCC------AGC----------------------------------------------------------------------------------GGCGACG-CG------TTGCATGTGCAGCAGCA-------------------------------------------------------------------G------------AAGCAG---------------GAGCAGCAACA------------------------------TCAA------------------CA---------------------GCAGCAACAGCAACAGCAGCGGCAACAG------------------------------------CAGCAACAACAGCAGCAGCAGGATACGAAAGCG-----------------------------------------------------------------------------------------------------A------------------------------GG---------------------------------------A------------------------------------------------TGACAAC-GACCACACGCAAAAGCAG--------------------------AGGSizeHit CountTotal NormTotal
No Reads
droEug1
TGGCG-TTC------AGCAG-C----------------------------------------------------------------------------------------------------------------------------------------------AGCGCATGACCATGGCCGGAATGCAGCCACCGCCACAGCG----ATATGGCAT---GCCGGGTAATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA-------------------------------------------------------------------------------C-CACCGCAGCACCTA--GCT---CTGATGAGCACGCC------AGTGGGTGCTGCTTCCACCGCCGCCTGCCTCCTTCCACTAACCGTTCCCGTGTCCCCGCTAACCCTGTCAAT-------------ATCACAAGCCCATTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AA------------------CCA---------------------------------------------TC-------------------------------------------------------------------------------------------------------------------AAGCCCATC------------------AGCAACAACAGCAAACACTGAACAATCCGACATTCATTCCAATTCCAGGCCAGTACCCGTCA---------------------------------------------------------------------------------------------------------------------------------ACTCAGCCACCC---AACSizeHit CountTotal NormTotal
No Reads
dm3
ACACC-CGC------TACAG-C--AATCCTGCG----------CTT--CACCA--------------------------GCCAG-AG---------C------------------------AATCCCACAATGACGCAACTG--CAGCAGCAGC-------AGC---------------------------------AG-------------------------------------------------------------CA-------------------------------------------------GCTGG-------------------------------CC----------------------------------------G------T-------------------------------------------CCAG--------------------------CA---------------------------------------------------TTT----G-------------------------------------------------------------------------------------------------------------AGCA---------TAT---------CGCCACAGGCCCTTGGCCACAGCAACATCGGCAGCAATTCGC------------------------------------------CCAA---------------GAGCAGCAGCA------------------------------GCAG------------------TA---------------------GCA------------------GCAACAGCAGCAATAGCAGCAGTAGCAGCCACAGTAGCAGCAGCAGCAT---------------CA--------------------------------------------------------------------------------------------------------GCGG--------------------CAGCAGCGACCA------GCCAACACACAGC-----------AACATTCCGCGCAGCACCATCGT---------------------------------------------------CCGCCTGACGACGG---------------------CC-AACGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................ACAG-C--AATCCTGCG----------CTT--CACCA--------------------------GCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCCGCGCAGCACCATCG...............................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................................................................................................................................CAATGACGCAACTG--CAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGCAGCACCATCGT---------------------------------------------------C..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCACAGTAGCAGCAGCAGCAT---------------C................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCAGCAGTAGCAGCCACAGC..............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................TCCCACAATGACGCAACTG--CAGCAGCAGC-------A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGC------------------------------------------CCAA---------------GAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------------------------------------------------GCGG--------------------CAGCAGCGACCA------GC...........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACATCGGCAGCAATTCGC------------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGC------------------------------------------CCAA---------------GAGCAGCAGCA------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................TGACGCAACTG--CAGCAGCAAG-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCA------GCCAACACACAGC-----------AA...................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................A--------------------------GCCAG-AG---------C------------------------AATCCCACAATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................G-------------------------------------------------------------CA-------------------------------------------------GCTGG-------------------------------CC----------------------------------------G------T-------------------------------------------CCAG--------------------------CA---------------------------------------------------TT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACATCGGCAGCAATTCGC------------------------------------------CCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGTAGCAGCCACAGTAGCAGCA.......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................AG-AG---------C------------------------AATCCCACAATGACGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGACCA------GCCAACACACAGC-----------AACATTCCGCG..........................................................................................................3511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GACGCAACTG--CAGCAGCAGC-------AGC---------------------------------AG-------------------------------------------------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------GCAACAGCAGCAATAGCAGCAGT..........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA------------------------------GCAG------------------TA---------------------GCA------------------GCAACAGCA........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATAGCAGCAGTAGCAGC....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCAGCAATTCGC------------------------------------------CCAA---------------GAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGT---------------------------------------------------CCGCCTGACGACGG---------------------CC-AACGG2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGG--------------------CAGCAGCGACCA------GCCAA........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CCAG-AG---------C------------------------AATCCCACAATGACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCATCGT---------------------------------------------------CCGCCTGACGACGG---------------------CC-AA...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------GAGCAGCAGCA------------------------------GCAG------------------TA---------------------GC....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------GAGCAGCAGCA------------------------------GCAG------------------TA---------------------GCA------------------.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TACAG-C--AATCCTGCG----------CTT--CACCA--------------------------GCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCCACAGTAGCAGCA.......................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACAGTAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------------------GCAG------------------TA---------------------GCA------------------GCAACAGCAG.......................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCCACAGTAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCACAGTAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAT---------------CA--------------------------------------------------------------------------------------------------------GCGG--------------------CAGCA..........................................................................................................................................................1940.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------------------------GCAG------------------TA---------------------GCA------------------GCAACAGC.........................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAT---------------CA--------------------------------------------------------------------------------------------------------GCGG--------------------CAGCAG.........................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAT---------------CA--------------------------------------------------------------------------------------------------------GCGG--------------------CA.............................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAT---------------CA--------------------------------------------------------------------------------------------------------GCGG--------------------CAG............................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAT---------------CA--------------------------------------------------------------------------------------------------------GCGG--------------------CAGC...........................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAT---------------CA--------------------------------------------------------------------------------------------------------GCGG--------------------C..............................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCATCGT---------------------------------------------------CCGCCTGGAC.................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA------------------------------GCAG------------------TA---------------------GCA------------------GCAA.............................................................................................................................................................................................................................................................................................................................................................2280.1310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------GAGCAGCAGCA------------------------------GCAG------------------.............................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------------------------GCAG------------------TA---------------------GCA------------------GCAACA...........................................................................................................................................................................................................................................................................................................................................................19160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA------------------------------GCAG------------------TA---------------------GCA------------------GC...............................................................................................................................................................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................G--CAGCAGCAGC-------AGC---------------------------------AG-------------------------------------------------------------CA-------------------------------------------------GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA------------------------------GCAG------------------TA---------------------GCA------------------G................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGTTT-CCC------GCCCA-GAAGGCACTGGA----------CGT--TCACA--------------------------TCC----------------------------------------------------------------------------------AGCG--------------------------------------------------------------------------------------------------CATTCACATGACCCTGAAAACGGATCCATCGGGCACTGTGAAGGTGGAGG-------------------------------AC----------------------------------------G------T-------------------------------------------TCAG--------------------------CTGCAGATC-------------------------------------------------------------ACC------AGCGAACGCAGGCCACGGGGTAGGCCGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCCA---------------AGGCTACAGCTTCAACAGCATCAACTGCAGCCGCAGCAGAA------------------GTT---------------------------------------------GCAAGTG---------------------------------------CAGCAGCAGCAGCAGCAAAAGGCACT--------------------------------------------------------------------------------------------------TCAGCAACTACC-------------------------------------------------------------------CCAAGCACAACAC------------------------------------------------CA--CCAACAGCAA--------------------------CAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................ACATGACCCTGAAAACGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
.......................................................................................................................................................................................................................................................................................CTGAAAACGGATCCATCGGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
........................................................................................................................................................................................................................................................................................................................GAGG-------------------------------AC----------------------------------------G------T-------------------------------------------TCAG--------------------------CTGCAGATC-------------------------------------------------------------ACC------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..................................................................................................................................................................................................................................................................................................................AAGGTGGAGG-------------------------------AC----------------------------------------G------T-------------------------------------------TCAG--------------------------CTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCA---------------AGGCTACAGCTTCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
......................................................................................................................................................................................................................................................................................................................TGGAGG-------------------------------AC----------------------------------------G------T-------------------------------------------TCAG--------------------------CTGCAGATC-------------------------------------------------------------ACC------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
droSec2
CCACA--ACAGCGCCAACAA-A-----------ATGTCGCC---CATGTGC--TC--------------------------------------------------------------------------------------------------------------------------ACCTG---------------------G----CTCCCTCAC---CCCCGGCGACCTCTTTGCCCAGCTCCAGCACCCGCCGCCCCA--------------------------------------------------------------------GCTGCCGCCGCACCTGCAC----------------------------------------G------C-------------------------------------------TCAG--------------------------TTCATGGCC---GCCGCCGCCTCCCTGGCCATGCAGT--------------CC--------------------------------------------------------------------------------------------GCCCGC-------------ACCGCCAGCTCGCCCA----GCCAACAGCAGCA-------------------------------------------------------------------G------C------ACCAG---------------CAGCAGCAACA------------------------------CCAC------------------CA---------------------GCAGCAGCAACACCACCAGCAGCAGCAA------------------------------------CTGCAGCAGCAGCAGCATCAGATGGCCAT--------------------------------------------------------------------------------------------------GCAGCAAC------------------------------TG---------------------------------------C------------------------------------------------TGCCGCC-GCAACTGCCCGGCAGCAA--------------------------CAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCATCAGATGGCCAT--------------------------------------------------------------------------------------------------GCAGC..................................................................................................................................................................................2711.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAA------------------------------------CTGCAGCAGCAGCA........................................................................................................................................................................................................................................................................................................2690.1110010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACACCACCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................21100.1010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA------------------------------CCAC------------------CA---------------------GCAGC.................................................................................................................................................................................................................................................................................................................................................................................21100.1010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAA------------------------------------CTGCAGCAGCAGCA........................................................................................................................................................................................................................................................................................................24150.0710010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA------------------------------------CTGCAGCAGCAGC.........................................................................................................................................................................................................................................................................................................22200.0510010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCA-------------------------------------------------------------------G------C------ACCAG---------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000
droYak3
CCATC-TCA------ACCAG-C--------------------------------T--------------------------------------------------------------------------------------G---AGCAGCCTCAGCCAGCACT----------------AC---------------------------------------------------ACTGCGCCGTATCACCATCCGCATTCGCATCCGCACTCG--------------------------------------------------------------------------CATTCGCATCCGCATCATC----------------------ACTACCAGCA---------------------------------------------------------------------------------------------------------------------------------------------GCACTATCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACATCTCCAGCAGCAGCAGCAGCACGCCCAGCAGCAACACCAGCAACA------------------------------TCAG------------------CA---------------------GCAGCAGCAGCAGCAGCAGCAGCAACAG---------------CAGCA---------------------GCAA----------------------------------------------------------CAGCAGC--------------------------------------------------AGCAGCACTGGGACTACTATGCCAGG-CAGCAGCAG-----------------------------------------------------CAACAT------------------------------------------------CA--ACAGCAGCAG--------------------------CAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................TCCGCATCATC----------------------ACTACCAGCA---------------------------------------------------------------------------------------------------------------------------------------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------------------------------TCAG------------------CA---------------------GCAGCA................................................................................................................................................................................................................................................................................................................................................................................19200.10202000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------GCAGCAGCAGCAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................25200.10200000000002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA------------------------------TCAG------------------CA---------------------GCAGCA................................................................................................................................................................................................................................................................................................................................................................................20200.10200000020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-----------------------------------------------------CAACAT------------------------------------------------CA--ACAGCAGCA..............................21160.06101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAT------------------------------------------------CA--ACAGCAGCAG--------------------------CA.20180.06100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------TCAG------------------CA---------------------GCAGCAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................23200.05100010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------CAGCA---------------------GCAA----------------------------------------------------------CAGCAGC--------------------------------------------------AGCAGCA...................................................................................................................................................................................24200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG---------------CAGCA---------------------GCAA----------------------------------------------------------CAGCAGC--------------------------------------------------AGCA......................................................................................................................................................................................26200.05100010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA------------------------------TCAG------------------CA---------------------GCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................20200.05100000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------TCAG------------------CA---------------------GCAGCAGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................28200.05100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG---------------CAGCA---------------------GCAA----------------------------------------------------------CAGC...............................................................................................................................................................................................................................................19200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAG---------------CA.........................................................................................................................................................................................................................................................................................................................................19200.05100010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------------GCAA----------------------------------------------------------CAGCAGC--------------------------------------------------AGCA......................................................................................................................................................................................19200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---------------------GCAA----------------------------------------------------------CAGCAGC--------------------------------------------------AGCAGCA...................................................................................................................................................................................23200.05100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAG---------------CAGCA---------------------GCAA----------------------------------------------------------CAGC...............................................................................................................................................................................................................................................27200.05100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAG---------------CAGC.......................................................................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
TGGGA-TTC------AGCAG-C----------------------------------------------------------------------------------------------------------------------------------------------CACGCATGGGCATGGCCGGAATGCAGCCGCCGCCGCAACG----ATACGGCAT---GCCGGGTAATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA-------------------------------------------------------------------------------C-TACCGCAGCACCTG--GCT---CTGATGAGCACGCC------AGTGGGTGCTGCTCCCACCGCCGCCTGCCTTCTTCCATTAACCGTTCCCGTAACCCCGCTCACCCTCTCCAT-------------ACCGCAAACTCATCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AG------------------CCA---------------------------------------------TC-------------------------------------------------------------------------------------------------------------------AAGTACATC------------------AACAACAACAGCAAACACTGAGCAATCCAACATTCATTCCAATTCCAGGCCAGTACCCGGCA---------------------------------------------------------------------------------------------------------------------------------ACTCAGCCACCC---AACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................ATGGGCATGGCCGGAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000

Generated: 05/17/2015 at 10:29 PM