ID:

dmo_507

 Coordinate:

scaffold_6328:2274969-2275119 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.2 -11.8 -11.8 -11.4

Flybase annnotation

CDS [Dmoj\GI16394-cds]; exon [dmoj_GLEANR_17117:1]; intron [Dmoj\GI16394-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_6308:1724183-1724206 +
  2. dmo_507  scaffold_6328:2274988-2275011 +
  3. scaffold_6359:1038460-1038483 +
  4. scaffold_6473:11084739-11084762 +
  5. scaffold_6473:11894169-11894192 +
  6. scaffold_6496:5528205-5528228 +
  7. scaffold_6496:5761318-5761341 +
  8. scaffold_6496:23226321-23226344 +
  9. scaffold_6500:6239758-6239781 +
  10. scaffold_6540:16362944-16362967 +
  11. scaffold_6540:20435826-20435849 +
  12. scaffold_6540:27870115-27870138 +
  13. scaffold_6540:29618912-29618935 +
  14. scaffold_6680:3564185-3564208 +
  15. scaffold_6680:6060645-6060668 +
  16. scaffold_6680:7311718-7311741 +
  17. scaffold_6680:9265467-9265490 +
  18. scaffold_6680:10735954-10735977 +
  19. scaffold_6680:11353581-11353604 +
  20. scaffold_6680:18833120-18833143 +
  21. scaffold_1559:366-389 +
  22. scaffold_6328:3480752-3480775 +
  23. scaffold_6359:2713264-2713287 +
  24. scaffold_6473:1523207-1523230 +
  25. scaffold_6473:8333667-8333690 +
  26. scaffold_6496:5692099-5692122 +
  27. scaffold_6496:9843970-9843993 +
  28. scaffold_6496:19528751-19528774 +
  29. scaffold_6540:2809309-2809332 +
  30. scaffold_6540:17373981-17374004 +
  31. scaffold_6540:18144787-18144810 +
  32. scaffold_6540:32085735-32085758 +
  33. scaffold_6540:32207726-32207749 +
  34. scaffold_6654:1897789-1897812 +
  35. scaffold_6680:1455039-1455062 +
  36. scaffold_6680:1838781-1838804 +
  37. dmo_2324  scaffold_6680:2663389-2663412 +
  38. scaffold_6680:3119969-3119992 +
  39. scaffold_6680:4838728-4838751 +
  40. scaffold_6680:21210063-21210086 +
star
  1. scaffold_6328:1457233-1457251 +
  2. dmo_507  scaffold_6328:2275035-2275053 +
  3. scaffold_6496:445606-445624 +
  4. scaffold_6496:2593158-2593176 +
  5. scaffold_6496:5755310-5755328 +
  6. scaffold_6496:6911440-6911458 +
  7. scaffold_6496:9290155-9290173 +
  8. scaffold_6496:10972399-10972417 +
  9. scaffold_6540:17789854-17789872 +
  10. scaffold_6540:25440696-25440714 +
  11. scaffold_6540:26036101-26036119 +
  12. scaffold_6540:31016497-31016515 +
  13. scaffold_6540:31242342-31242360 +
  14. scaffold_6654:689600-689618 +
  15. scaffold_6680:2825862-2825880 +
  16. scaffold_6680:5380830-5380848 +
  17. scaffold_6680:9727180-9727198 +
  18. scaffold_6680:13185747-13185765 +
  19. scaffold_6680:13287084-13287102 +
  20. scaffold_6680:15623706-15623724 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAGTCGAGCGGCCTCGGTGATGCAGGATATTGCACGTGAGGGAGTTATTGGTGTTGCGCCAACGACGACAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGTCTCAGCAGTCACAGCAACGGCAGCAGCAGCAGCAGCAGCAACAACGGCGGCGGCAGCAACGGCAGCTGCAACAGCTGCGCCCACAGCAACAGCCACGCCCCTAGCAGCAGTTACGCCCACAGCAGCAGCAGCAGCCGCTGCATCCA
*********************************************************************.((..........((.((.((....((....((.((....)).))....))....)).)).)).))******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V041
embryo
 M060
embryo
 M046
female body
 V056
head
 V110
male body
.............................................................................................................................................................GCAGAAACGGCAGCTGCAACAGGTG..................................................................... 25 2 1 1.00 1 1 0 0 0 0
...............................................................GACGATCGCAGCAACAGCAGCAGCAGCA................................................................................................................................................................ 28 2 4 0.25 1 0 1 0 0 0
.......................AGGATTTTGAACGAGAGGGA................................................................................................................................................................................................................ 20 3 5 0.20 1 0 0 0 1 0
.....................................................................AGCAGCAACAGCAGCAGCAGCAGC.............................................................................................................................................................. 24 0 20 0.10 2 0 0 2 0 0
...............GATGATGCAGGATATACCA......................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 1
.....................................................................AGCAGCAACAGCAGCAGC.................................................................................................................................................................... 18 0 20 0.05 1 0 0 1 0 0
....................................................................................................................CAGCAACGGCAGCAGCAGC.................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0
......................CAGGACATTGCCCGTCAGG.................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0
..................................................................GACAGCAGCAACAGCAGCAGCA................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0
......................................................................GCAGCAACAGCAGCAGCAGCAGC.............................................................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0
....................................................................................AGCAGCAGCAGCAGCAGCAGTC................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

GTCAGCTCGCCGGAGCCACTACGTCCTATAACGTGCACTCCCTCAATAACCACAACGCGGTTGCTGCTGTCGTCGTTGTCGTCGTCGTCGTCGTCGTCGTCGTCAGAGTCGTCAGTGTCGTTGCCGTCGTCGTCGTCGTCGTCGTTGTTGCCGCCGCCGTCGTTGCCGTCGACGTTGTCGACGCGGGTGTCGTTGTCGGTGCGGGGATCGTCGTCAATGCGGGTGTCGTCGTCGTCGTCGGCGACGTAGGT
********************************************************************************************************************.((..........((.((.((....((....((.((....)).))....))....)).)).)).))********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V049
head
 V041
embryo
..............................................................................................................................................................................................CTTTGTCGGTGCGGGGAACGTC....................................... 22 2 2 0.50 1 1 0
.........................................................................CGTTGTCGTCGTCGTCGTCGTC............................................................................................................................................................ 22 0 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6328:2274919-2275169 + dmo_507 CAGTC--GAGCGGC--CTCG--GTGAT----------GCAGGATA----------------------------------T-TGCA-----------CGTGAGGGAGTTATTGGTGTT----------------------------------------------------------G------CGC-CAACGACGACAGCAG-CAACAGCAGCAGCA---------------GCAGCAGCAGCAGCAGTCTCAGCA--GTCACAGCA------------------------------------------------------------------------------------------------------ACGG---------CAGCAGCAGC---------------AGCAGCAGCAACAACGGCGGCGGCAGCAACGGCAGCTGCAACAG------CTGCGCCC---------------------ACAGC------------AAC---AGCCA------------CGCCCC------------------------------------------------TAG---CAG--CA------------------------------------------GTTACGCCCACAGCAGCAG---------------CAGC---A------GCCGCTG---------------CA---------------------TCCA
droVir3 scaffold_13052:1898062-1898312 - CAG--CAG--CAGCAG--------------CAGT--------AAT----------------------------------T-------------------------------------------------AGCTGCA-------------------------G-------------------------------------------CAGCAGCAGCC---GCAG------------CAGCAGCAGCAGCCGCAGCA--GCAGCAGCA---------------------GCC-GCA--GCAGCAGCAGC---AGCA------------------------------GTAGTAAT--------------------------------------T---------------AGCTGCAGCAGCAACAGCCGCAGCAGCAGCAGCAGCCGCAGCAGCAGCCG------CAGCAGCAACAGCAGCAGCAAATGCAGCAACATCAAAATCAGC---TGCCG------------TAACAG------------------------------------------------CCG---CAG--CA------------------------------------------GCAGCAGCAGCAGCAGCAG---------------CAGC---A------GCAGCAG---------------CA---------------------GCCA
droGri2 scaffold_3013:4015-4255 - CAG--CAG--CAGCTC-----TGGT-----CAGC--------------------------------------------------------------------------------------------AGCAG---CAG----------------------CAGCTGCAGCAGC----AGCAGC-AG-CAGCGGCAGCAGCAG-CA---------------GCAG---------------CA-----------------------------------------------GCG-GCA--GCAGCAGCAGC---AG------------C---------------AGCGGCAGCAGCA---------GCAGCGGCAG---------CAGCAGCAGC---------------AGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCGG------CAGCGGCA---------------------GCAGC------------AGC---AGCAG------------CAGCAG------------------------------------------------CAG---CGG--CA------------------------------------------GCAGCAGCAGCAGCAGCAG---------------CAGC---A------GCGGCAG---------------CA---------------------GCAG
droWil2 scf2_1100000004888:1009719-1009955 - CAA--CAG--CAGCAA--------------CAAC--------------------------------------------------------------------------------------------AACAG---CAG----------------------CAGCAGCAACAGC-----------AA-CAACAGCAGCAGCAA-CA------------------------ACA-----------------------------------------------ACAGCAGCAACAA---CAACA---------GCAGCA------GCAAC---------------AACAGCAACAGCA---------ACAACAACAG---------CAGCAGCAAC---------------AGCAACAGCAACAACAGCAGCAGCAGCAGCAACTGCAACAACAG------CAGCAGCA---------------------ACAGC------------AAC---AGCAA------------CAACAT------------------------------------------------CAG---CAG--AA------------------------------------------ACAGCAACAACAGCAGCAA---------------CAGC---A------GCAACAG---------------CA---------------------ACAA
dp5 2:6797262-6797510 + CAA--CAG--CAACAT--------------CTGC--------------------------------------------------------------------------------------------AGCAGCAACA----------------------------------------------------GCAGA-------------------AGCA---GCAG------------CAACAGAAGCAGCAGCAACA--GCAGCAGCA---------------------ACA-GCA--GCAGCAACAACAGAAGCA------------------------------GCAGCAACA---------GCAGCAGCAG---------AAGCAGCCGC---------------AGCAG---CAGCAGGTG------------------CAGCAGCAACATCAG------CAGCAGCAGGTACAGCAGCAACAGCAGCAACAACAGC---AGCAGCAGCAA------------CTGCAG------------------------------------------------CAG---CAG--CA------------------------------------------ACTGCAGCAGCAGCAACAG---------------CAGC---A------ACAGCAG---------------CA---------------------GCAA
droPer2 scaffold_15:2017459-2017717 - TCTGC--ACCTGGC--CTCG--CCGCA----------CCAGATGG-----------------------------------TC------------GCCGCGGGCGGGTCGCCGGTGAT----------------------------------------------------------G------CTT-CACCAGCACCAGCAG-CATCAGCAGCAGCAGCC---C------------CACCAGCAGCAGTCCCACCA--GCAACAGCA---------------------------------------------GCAGCAG------------------------------------------------CAACAC---CACCAG---CAGCAGC------------------AGCAGCAACAGCAGCAGCAGCAGCAGCAGC---------AC------------------CTCCA------------CCAGC------------AGC---AGCAGCACCAACAGCAGCAGCAA------------------------------------------------CAG---TTC--GC------------------------------------------CCAGCAGCAGCAGCAGCAG---------------CAAC---A------GCAGCAG---------------CA---------------------TCCG
droAna3 scaffold_13248:2270612-2270861 - dan_4064 TGG--CAG--AAGCAA--------------CGATCTAACAATAAA----------------------------------T-TG---------------------------------------------------CAG----------------------CAGAAACAGCAGGCAG-AGCAGG-AG-CGACGGCAGCAGCAG-CA------------------------------------------GCCACAG--CAGCAACAGCA---------------------GCAG---------------C---AGCA---------------------------ACAGCAACAGCA---------ACAGCAACAG---------CAGCAGCAAC---------------AG---------------------------------CAGCAGCAACAGCAG------CAGCAGCCACAGCAGCAGCAACAGCAGCAACG---------------------------------ACAG---------------------------------CAGCAGCAGCAACGTCAGCAGCAG--CA------------------------------------------GCAACGACAACAACAGC------------------AAG---CAGTGCAGCAACAG---------------CA---------------------TC--
droBip1 scf7180000395984:15896-16141 - TCGGC--GGGCAGT--CTGG--GCGCT----------GCGAGCGGTAGCAGT---------------------------------------------GTGGGCGACTCGCTGTGG-------------------------------------------------------------AGC----AGTAGCGAAGCGCAGCAG-TTCCAGCAGCAACA---GCAA------------CAACAGCAGCAGGCCCAACA--ACAGCAGCA---------------------ACA-G--------------------------------------------------------------------------CAACACCATCACCAC---CAGCAAC---------------------------AACAACAGCTCCAGCAGCA------------------------------------------------GCAGC------------AAC---AACAG------------GCGCAGCAGCAACAACAACAG---------------------------------CAA---CAC--CA------------------------------------------TCACCACCACCAGCAACAG---------------GCAC---A------GACGGCG---------------CA---------------------GGCC
droKik1 scf7180000302592:621650-621905 - TCTGC--ACCTGGC--CACG--CCGCA----------CCAGATGG-----------------------------------TC------------GCCGCGGGCGGTTCGCCGGTGAT----------------------------------------------------------G------CTT-CACCAGCAGCAGCAA-CA---------------GCA--------------------------------------------------------CCTTCAGCAGCAG---------------C---AGCAGCAGCATCATC---------------AACAGCAGCA---------------------------------------GCAACACCAACAGCAGCAGCAGCAGCAACACCAGCAACAGCAGCA------------------------------------ACA------------TCACC------------------------------------------------------------------------------------AACAGCAGCAGCAGCA--------------------------ACATCACCAGCAATTTGGCCAGCA------GC---------------------------------------AGCATCCCCACGCCCATCACCTGCACCACCACTCGCACCATCCG
droFic1 scf7180000453829:1092944-1093183 + CAGTTCAA--CAAC-------------------------------------------------------------------------------------------------------------------A-----A--------G-----CCCTTCAACTTGGCGCAGTTGATCA-AGCAGC-AG-CAGCAGCAACGGCAG-CA---------ACTGCA---G------------CAGCAGCAACTGCAGCAG-----------CA---------------------A------------------------------------C---------------AACAGCAGCA------------GCAACAACAG---CAGCAA---CAACAGC------------------AGCAGCAACAGCAACAGCAGCAACTACAACAACAACAGCAG------CAACAGCA---------------------GCAGC------------AAC---AACAG------------CAACAG------------------------------------------------CAG---CAA--CT------------------------------------------ACAACAACAACAGCAGCAG---------------CAGC---A------GCAACTA---------------CA---------------------ACAA
droEle1 scf7180000491238:690902-691134 + CGA--CAG--CGGCGG--------------CTGC--------------------------------------------------------------------------------------------TGCGG---CTGCTGTTGAGAGTCGCTTGTT------------GGGTTT-G------CAG-CACCAGCAACAGCAA-CA---------------ACAGCAACATCAG-----------------------CAGCAACAACA---------------------G------CAACA---------TCAGCA------------------------------GCAACAACAGCAGCAGCAACAA------------------CAGCAAC------------------------AACAACAGCAACACCAACA------------GCAACATCAG---CAGCA---------------------GCAGC------------ACC---TACAA------------CAACAA------------------------------------------------CAA---CAA--CA------------------------------------------GCAACACCAACAGCAGCAA---------------CAAC---A------ACAACAG---------------CA---------------------ACCA
droRho1 scf7180000779334:988876-989125 - CAG--CAG--CAACAC-CCACAGATA-----T-----GCA---------------------------------------------------------GCGATATGTG---------------------------CAA----------------------CGGATACAGCAGAATT-ATC----AG-CACCTACAGCAACAT-CA---------------GCAGCAACAGCAG-----------------------CAGCAACAGCA---------------------G------------------------------------C---------------AACATCAGCAGCA---------ACAGCAGCAG---------CAGCAACAGC---------------AGCAGCAGCAGCAACAGCAGCAGCAACAGCAGCA-CAACAGCAG------CAGCCACA---------------------GCAGC------------AGC---AGCAA------------CTGCAA------------------------------------------------CTG---CAG--CA------------------------------------------GCAACAGCAACTGCAACAG---------------CAAC---A------GCAACTG---------------CA---------------------GCAG
droBia1 scf7180000301506:690701-690969 + CGGTC--TG------------------------------------------TCTGATGGGCCACGAGCGGCGCCAGACGCTC-CACCTTATCCAGTCGCTGGCCGCCC--AG---GTGCTCTTC--AACA-----A-------------------------------------------------------GCAGG----------------AGAA---GCAA------------CAGCAGGAGCAGTACCAACA--GCAACAGCA---------------------GCA-G-----------------------CAT---------------------------CATCAT------------------------CATCAT---CAGCAGC------------------AGCAGCAGCAGCAGCAGCAGCAGCAAC---------AGCAACACCAG------CAGCA---TCA------------GCAGC------------------------------------------------------AGCAACACCAGCAGCAACGT---------------CAG---CAA--CAGTTCCTGGACC--------------------------------CAG----CGCAGCAGCAA---------------CAGC---A------GCAGCAG---------------CA---------------------GACA
droTak1 scf7180000415870:224464-224719 + CAGTC--TG------------------------------------------TCTGATGGGCCACGAGCGGCGCCAGACGCTC-CACCTTATCCAGTCGCTGGCCGCTC--AG---GTGCTCTAC--AACA-----A-------------------------------------------------------GCAGG----------------AGAA---GCAG------------CAGCAGGAGCAGTACCAGCA--GCAACAGCA---------------------GCA-G-----------------------CAT---------------------------CAGCAG------------------------CATCAG---CAGCATC---------------------AGCAACACCAGCAGCAGCAGCA------------------------------------ACG------------TCAGC------------------------------------------------------------------------------------AT--------------CAGTTCCTGGACCCAGCGCAGCAGCAACAGCAACAG------------CAGCA---GCAGCAGACACAGACGCAACAGCAGC---A------GCCGCAG---------------CA-------------------------
droEug1 scf7180000409032:909246-909477 - TGG--CGA--CACCAACTCG--GTGATGACCAACTTTTC------------TATGATGGACT-----CGCCGCCACA---GC-CA----------------------------------TCTTCGCAGCAGCAATT----------------------------------GC----------CTT-C-------------------AGC----CCA---------------GCAGCAGCAACAGCAGTCTCAGCA--GCAACAGCA---------------------------------------------ACAGCAGCAGCAACAACAGCAGCAGCAACAG-----------------------------------------------------------------------------GCAGCAGT-GCTGCAGC------------AA------------------GTCCA------------ACAGC------------------------------------AGCAG------------------------------------------------AAG---CAC--CA------------------------GCA---------------ACACCAAGTGCAGCAACAG---------------CAAC---A------GGTCCTG---------------CA---------------------TCAA
dm3 chrX:9648951-9649206 + TCTGC--ACCTGGC--CACG--CCGCA----------CCAGATGG-----------------------------------TC------------GCCGCGGGCGGTTCGCCGGTGAT----------------------------------------------------------G------CTT-CACCAGCAGCAGCAG-CA---------------GCAGCAACATCAG-----------------------CAGCAACAGCA---------------------G------CAACA---------GCAGCAGCAGCAGCATC---------------AACAGCAG---------------CAA------------------CAGCAGCAACATCAAC---------------------AGCAGCAGC---------------AGCAACATCAGCAGCAGCAGCAGCAACA------------CCACC------------------------------------------------------------------------------------AGCAACAGCAGCAGCA--------------------------TCATCACCAGCA------ATTTGGCCAGCAGC---------------------------------------AGCATCCCCATGCCCATCA---------------------CCTG
droSim2 x:9192670-9192916 + TCTGC--ACCTGGC--CACG--CCGCA----------CCAGATGG-----------------------------------TC------------GCCGCGGGCGGTTCGCCGGTGAT----------------------------------------------------------G------CTT-CACCAGCAGCAGCAG-CAACATCAGCAG--------------------------------------------CA---------------------------ACAG---------------C---AGCAGCAGCAGCATC---------------AACAGCAACAGCA---------GCAGCAACAT---------------------------------------------------------------------CAGCAGCAACAGCAG------CAGCAGCAACA------------CCACC------------------------------------------------------------------------------------AGCAACAGCAGCAGCA--------------------------TCATCACCAGCAATTTGGCCAGCA------GC---------------------------------------AGCATCCCCATGCCCATCACCTGCACCACCATGCCCACCACTCG
droSec2 scaffold_4:2908012-2908248 + CAG--ATG--CAGCAG--------------CAGCTGCACTACGAT----------------------------------T-CG---------------------------------------------------CAC----------------------CAGGAGCTGCAGTTCG-AGCAGC-AT-CAGCCGCACCAGTCG-CA---------------TCAGCAACATCAG-----------------------CAGCAG------------------------------------------------------------------------------------CAGCTGCA---------GCATCAGCAG---------CAGCAGCAGC---------------TGCAG---CATCAGCAG------------------CAGCAGCAACATCAG------CAGCAACAAAATCAGCAGCAGCAGCAGC------------TAC---AACAG------------CAACAT------------------------------------------------CAG---CAG--CA------------------------------------------GCAACAGCTGCAGCATCAG---------------CAGC---A------GCATCAG---------------CA---------------------GCAA
droYak3 X:12362341-12362575 + CGA--C------------------------------------CCATTGCCTT----------------------------------------------------------------------------CA-----A--------G-----CCCATT------------CCTTTCG-AGCCGG-ACTACCGCATC-----GCCTGCCAGCAGCAGCAGCA---G------------CACCAGCAGCAGCTGCAG--TTGCAACAGCAGCAGCATCAGCACCAGCAGCAGCAG---------------C---AGCA------GCAGC---------------AGCAGCAG---------------TTG------------------CAGCTGCAACACCAAC---------------------------------------------------------------AGCA---CCAGCAGCAGCAACAGCAGC------------------------------------AACAA------------------------------CATCATCAGCATCAGCATCAGCAGCAG--------------------------------------------------------------CAG---------------CAGC---A------GCAACAA---------------CA---------------------TC--
droEre2 scaffold_4690:6163362-6163579 + CAGACCAG--CGGCAA--------------CTTTCT-GCGACCCATTGCCTT----------------------------------------------------------------------------CA-----A--------G-----CCCATT------------CCGTTCG-AGCCGG-ACTACCGCATC-----GCCTGCCAGCAGCAGCAGCA---G------------CA------------TCAGCA--GCAACTGCA---------------------------------------------GTTGCAGCAACAAC------------------------------------------------------------AGCAGC------------------AGCAGCAACAGCAGCAGTTGCAGCTGCAGC------------------------------ACCA------------ACAGC------------------------------------AGCAA------------------------------------------------CAG---CAG--CA------------------------GCA---------------ACAGCAGCAGCAGCAGCAG---------------CAACATCA------GGCGCTG---------------CA-------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CAGTC--GAGCGGC--CTCG--GTGAT----------GCAGGATA----------------------------------T-TGCA-----------CGTGAGGGAGTTATTGGTGTT----------------------------------------------------------G------CGC-CAACGACGACAGCAG-CAACAGCAGCAGCA---------------GCAGCAGCAGCAGCAGTCTCAGCA--GTCACAGCA------------------------------------------------------------------------------------------------------ACGG---------CAGCAGCAGC---------------AGCAGCAGCAACAACGGCGGCGGCAGCAACGGCAGCTGCAACAG------CTGCGCCC---------------------ACAGC------------AAC---AGCCA------------CGCCCC------------------------------------------------TAG---CAG--CA------------------------------------------GTTACGCCCACAGCAGCAG---------------CAGC---A------GCCGCTG---------------CA---------------------TCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................AGCAG-CAACAGCAGCAGCA---------------GCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
....................................................................................................................................................................................................AGCAG-CAACAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
.....................................................................................................................................................................................................................................................................CAGCA------------------------------------------------------------------------------------------------------ACGG---------CAGCAGCAGC---------------.....................................................................................................................................................................................................................................................................................................................................19200.051100000
.................................................................................................................................................................................................GACAGCAG-CAACAGCAGCAGCA---------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.....................................................................................................................................................................................................GCAG-CAACAGCAGCAGCA---------------GCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000010
....................................................................................................................................................................................................................AGCA---------------GCAGCAGCAGCAGCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
droVir3
CAG--CAG--CAGCAG--------------CAGT--------AAT----------------------------------T-------------------------------------------------AGCTGCA-------------------------G-------------------------------------------CAGCAGCAGCC---GCAG------------CAGCAGCAGCAGCCGCAGCA--GCAGCAGCA---------------------GCC-GCA--GCAGCAGCAGC---AGCA------------------------------GTAGTAAT--------------------------------------T---------------AGCTGCAGCAGCAACAGCCGCAGCAGCAGCAGCAGCCGCAGCAGCAGCCG------CAGCAGCAACAGCAGCAGCAAATGCAGCAACATCAAAATCAGC---TGCCG------------TAACAG------------------------------------------------CCG---CAG--CA------------------------------------------GCAGCAGCAGCAGCAGCAG---------------CAGC---A------GCAGCAG---------------CA---------------------GCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGCAACATCAAAATCAG...................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCAAAATCAGC---TGCCG------------TAA...........................................................................................................................................................................................................2311.001000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---TGCCG------------TAACAG------------------------------------------------CCG---CAG--CA------------------------------------------GCA..............................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCAGCAACAGCCGC................................................................................................................................................................................................................................................................................................................1950.201000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................CAGCA--GCAGCAGCA---------------------GCC-GCA--G..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CAG------------CAGCAGCAGCAGCCGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCCGCAG............................................................................................................................................................................................................................................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GCCGCAGCA--GCAGCAGCA---------------------GCC-GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.111001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GCC---GCAG------------CAGCAGCAGCAGCCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.111001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCAGCAGCAGCAGCAGCCGC..............................................................................................................................................................................................................................................................................................2390.111001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCG------CAGCAGCAACAGCA...............................................................................................................................................................................................................................................................2190.111001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCCGCAGCAG...........................................................................................................................................................................................................................................................................................................21110.091000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCCGCAGCAG...........................................................................................................................................................................................................................................................................................................20140.071000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCCGCAGCAGCAGCCG------.............................................................................................................................................................................................................................................................................21160.061001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGCAGCAGCCG------CAGCAGC......................................................................................................................................................................................................................................................................22180.061000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCCGCAGCAGCAGCC....................................................................................................................................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GCAGCAGCA---------------------GCC-GCA--GCAGCAGCAGC---A....................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCCGCAGCA..........................................................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCCGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCGCAGCAGCAGCAG.....................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCAGCAGCAGCCG------CAG..........................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CA--GCAGCAGCA---------------------GCC-GCA--GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG------CAGCAGCAACAGCAGCAGCA.........................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGCAGCAGCAGCCG------CAGC.........................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AGCA---------------------GCC-GCA--GCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CAGCAGCAGCAGCCGCAGCA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................CA-------------------------G-------------------------------------------CAGCAGCAGCC---GCAG------------CA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................AGCAGCC---GCAG------------CAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCAGCCGCAGCA--GCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CA-------------------------G-------------------------------------------CAGCAGCAGCC---GCAG------------CAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGCAGCAGCCG------CAGCAG.......................................................................................................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
droGri2
CAG--CAG--CAGCTC-----TGGT-----CAGC--------------------------------------------------------------------------------------------AGCAG---CAG----------------------CAGCTGCAGCAGC----AGCAGC-AG-CAGCGGCAGCAGCAG-CA---------------GCAG---------------CA-----------------------------------------------GCG-GCA--GCAGCAGCAGC---AG------------C---------------AGCGGCAGCAGCA---------GCAGCGGCAG---------CAGCAGCAGC---------------AGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCGG------CAGCGGCA---------------------GCAGC------------AGC---AGCAG------------CAGCAG------------------------------------------------CAG---CGG--CA------------------------------------------GCAGCAGCAGCAGCAGCAG---------------CAGC---A------GCGGCAG---------------CA---------------------GCAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGGCAGCAGCAGCAGCGGC..............................................................................................................................................................................................................................................................................................22200.05101
droWil2
CAA--CAG--CAGCAA--------------CAAC--------------------------------------------------------------------------------------------AACAG---CAG----------------------CAGCAGCAACAGC-----------AA-CAACAGCAGCAGCAA-CA------------------------ACA-----------------------------------------------ACAGCAGCAACAA---CAACA---------GCAGCA------GCAAC---------------AACAGCAACAGCA---------ACAACAACAG---------CAGCAGCAAC---------------AGCAACAGCAACAACAGCAGCAGCAGCAGCAACTGCAACAACAG------CAGCAGCA---------------------ACAGC------------AAC---AGCAA------------CAACAT------------------------------------------------CAG---CAG--AA------------------------------------------ACAGCAACAACAGCAGCAA---------------CAGC---A------GCAACAG---------------CA---------------------ACAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................GCAGCAACAA---CAACA---------GCA....................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
.......G--CAGCAA--------------CAAC--------------------------------------------------------------------------------------------AACAG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
.................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---------------AGCAACAGCAACAACAGCAGCA...............................................................................................................................................................................................................................................................................................................28100.10101000
.......................................................................................................................................................................................................................................................................................................................................................AGCAACAGCA---------ACAACAACAG---------CAGCA.........................................................................................................................................................................................................................................................................................................................................................25200.10202000
..................................................................................................................................................................................................................................................................................................A---CAACA---------GCAGCA------GCAAC---------------AAC....................................................................................................................................................................................................................................................................................................................................................................................................20200.10200002
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAACTGCA................................................................................................................................................................................................................................................................................................22170.06101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG------CAGCAGCA---------------------ACAGC------------.....................................................................................................................................................................................................................................21200.05101000
..A--CAG--CAGCAA--------------CAAC--------------------------------------------------------------------------------------------AACAG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
........................................................................................................................................................................................................................................................................................................................................................GCAACAGCA---------ACAACAACAG---------C.............................................................................................................................................................................................................................................................................................................................................................20200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................ACAACAACAG---------CAGCAGCAAC---------------AG...................................................................................................................................................................................................................................................................................................................................22200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................ACAACAACAG---------CAGCAGCAA.....................................................................................................................................................................................................................................................................................................................................................19200.05100010
.................................................................................................................................................................GCAGCAACAGC-----------AA-CAACAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
...............................................................................................................................................................CAGCAGCAACAGC-----------AA-CAACAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
......................................................................................................................................................................AACAGC-----------AA-CAACAGCAGCAGCAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAGCAGCAGC.............................................................................................................................................................................................................................................................................................................22200.05100010
......................................................................................................................................................................................................................................................................................ACAGCAGCAACAA---CAACA---------GCA....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
...........................................................................................................................................................................................AACAGCAGCAGCAA-CA------------------------ACA-----------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100001
...................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------AGCAACAGCAACAACAGCAGCAGCA............................................................................................................................................................................................................................................................................................................29200.05100100
..................................................................................................................................................................CAGCAACAGC-----------AA-CAACAGCAGCAGCAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAGCAGCA............................................................................................................................................................................................................................................................................................................22200.05101000
........................................................................................................................................................................................................................................................................................AGCAGCAACAA---CAACA---------GCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG------CAGCAGCA---------------------ACAGC------------.....................................................................................................................................................................................................................................19200.05100001
........................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAGCAGCAGCAGCAG........................................................................................................................................................................................................................................................................................................27200.05101000
CAA--CAG--CAGCAA--------------CAAC--------------------------------------------------------------------------------------------AACAG---CAG----------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAGCAGCAGCAG...........................................................................................................................................................................................................................................................................................................24200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................C---------------AGCAACAGCAACAACAGCAGCAGC.............................................................................................................................................................................................................................................................................................................25200.05100010
................................................................................................................................................................................................................................................................................................................................................................A---------ACAACAACAG---------CAGCAGCAA.....................................................................................................................................................................................................................................................................................................................................................20200.05100001
.....................................................................................................................................................................CAACAGC-----------AA-CAACAGCAGCAGCAA-CA------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG------CAGCAGCA---------------------ACAGC------------.....................................................................................................................................................................................................................................18200.05100010
.............................................................................................................................................................................................................................................................................................CAACAA---CAACA---------GCAGCA------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAA---------------CAGC---A------GCAAC............................................20200.05100010
.............................................................................................................................................................................................CAGCAGCAGCAA-CA------------------------ACA-----------------------------------------------ACAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100001
............................................................................................................................................................................................................................................................................................................................................................................AACAACAG---------CAGCAGCAAC---------------AGCA.................................................................................................................................................................................................................................................................................................................................22200.05101000
......AG--CAGCAA--------------CAAC--------------------------------------------------------------------------------------------AACAG---CAG----------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..........................................................................................................................................................................................................................................................................................................................................................AACAGCA---------ACAACAACAG---------CAGCA.........................................................................................................................................................................................................................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................ACAACAACAG---------CAGCAGCAAC---------------A....................................................................................................................................................................................................................................................................................................................................21200.05100010
......................................................................................................................................................................AACAGC-----------AA-CAACAGCAGCAGCAA-CA------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
................................................................................................................................CAG---CAG----------------------CAGCAGCAACAGC-----------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
............GCAA--------------CAAC--------------------------------------------------------------------------------------------AACAG---CAG----------------------CAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.................................................................................................................................................................................................................................................................................................AA---CAACA---------GCAGCA------GCAAC---------------AA.....................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..........................................................................................................................................................................................................................................................................................................................................................AACAGCA---------ACAACAACAG---------CAGCAGCA......................................................................................................................................................................................................................................................................................................................................................25200.05100010
.......................................................................................................................................................................................................................................................................................................AACA---------GCAGCA------GCAAC---------------AACAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
dp5
CAA--CAG--CAACAT--------------CTGC--------------------------------------------------------------------------------------------AGCAGCAACA----------------------------------------------------GCAGA-------------------AGCA---GCAG------------CAACAGAAGCAGCAGCAACA--GCAGCAGCA---------------------ACA-GCA--GCAGCAACAACAGAAGCA------------------------------GCAGCAACA---------GCAGCAGCAG---------AAGCAGCCGC---------------AGCAG---CAGCAGGTG------------------CAGCAGCAACATCAG------CAGCAGCAGGTACAGCAGCAACAGCAGCAACAACAGC---AGCAGCAGCAA------------CTGCAG------------------------------------------------CAG---CAG--CA------------------------------------------ACTGCAGCAGCAGCAACAG---------------CAGC---A------ACAGCAG---------------CA---------------------GCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................A---------GCAGCAGCAG---------AAGCAGCCGC---------------AG...................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------CAG---CAG--CA------------------------------------------ACTGCAGCAGC......................................................................................2040.2510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAA------------CTGCAG------------------------------------------------CAG---C.................................................................................................................................................2040.2510100000000
............................................................................................................................................................................................................................................................................................................CAACAACAGAAGCA------------------------------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................1970.1410010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG---------------CAGC---A------ACAGCAG---------------CA---------------------....20200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGC---AGCAGCAGCA...........................................................................................................................................................................................................................22200.1020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGC---AGCAGCA..............................................................................................................................................................................................................................21200.1020200000000
................................GC--------------------------------------------------------------------------------------------AGCAGCAACA----------------------------------------------------GCAGA-------------------AG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.0610100000000
.........................................................................................................................................................................................................................................................................................................................................................CAGCAACA---------GCAGCAGCAG---------..............................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.....................................................................................................................................................................................................................................................AGCAGCAACA--GCAGCAGCA---------------------ACA-GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
........................................................................................................................................................................................................................................................AGCAACA--GCAGCAGCA---------------------ACA-GCA--GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
......................................................................................................................................................................................................................................................GCAGCAACA--GCAGCAGCA---------------------ACA-GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAG---------------CAGC---A------AC...............................................20200.0510001000000
............................................................................................................................................................................................................................................................ACA--GCAGCAGCA---------------------ACA-GCA--GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAACAGC---AGC..................................................................................................................................................................................................................................20200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAACAGC---AGCA.................................................................................................................................................................................................................................23200.0510000100000
...........................................................................................................................................................................................................................................................AACA--GCAGCAGCA---------------------ACA-GCA--GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.......................................................................................................................................................................................................................................................................................................................GCA------------------------------GCAGCAACA---------GCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
.........................................................................................................................................................................................................................................................GCAACA--GCAGCAGCA---------------------ACA-GCA--GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
......................................................................................................................................................................................................................................................GCAGCAACA--GCAGCAGCA---------------------ACA-GCA--GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAG---------------CAGC---A------ACAGCAG---------------CA---------------------....28200.0510100000000
...................................................................................................................................................................................................................................................GCAGCAGCAACA--GCAGCAGCA---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGC---AGCAGCA..............................................................................................................................................................................................................................19200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAG---------------CAGC---A------A................................................20200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGC---AGCAGCAGCA...........................................................................................................................................................................................................................18200.0510000100000
.......................................................................................................................................................................................................................................................CAGCAACA--GCAGCAGCA---------------------ACA-GCA--GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
........................................................................................................................................................................................................................................................AGCAACA--GCAGCAGCA---------------------ACA-GCA--GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGC---AGCAGCAGCAA------------C.............................................................................................................................................................................................................22200.0510000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGC---AGCAGCAGCA...........................................................................................................................................................................................................................21200.0510000100000
......................................................................................................................................................................................................................................................GCAGCAACA--GCAGCAGCA---------------------ACA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG---------------CAGC---A------ACAGCAG---------------...........................20200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAG---------------CAGC---A------ACA..............................................19200.0510100000000
....................................................................................................................................................................................................................................................................GCAGCA---------------------ACA-GCA--GCAGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAACAGC---AG...................................................................................................................................................................................................................................19200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAG---------------CAGC---A------ACAGC............................................23200.0510100000000
droPer2
TCTGC--ACCTGGC--CTCG--CCGCA----------CCAGATGG-----------------------------------TC------------GCCGCGGGCGGGTCGCCGGTGAT----------------------------------------------------------G------CTT-CACCAGCACCAGCAG-CATCAGCAGCAGCAGCC---C------------CACCAGCAGCAGTCCCACCA--GCAACAGCA---------------------------------------------GCAGCAG------------------------------------------------CAACAC---CACCAG---CAGCAGC------------------AGCAGCAACAGCAGCAGCAGCAGCAGCAGC---------AC------------------CTCCA------------CCAGC------------AGC---AGCAGCACCAACAGCAGCAGCAA------------------------------------------------CAG---TTC--GC------------------------------------------CCAGCAGCAGCAGCAGCAG---------------CAAC---A------GCAGCAG---------------CA---------------------TCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TGG--CAG--AAGCAA--------------CGATCTAACAATAAA----------------------------------T-TG---------------------------------------------------CAG----------------------CAGAAACAGCAGGCAG-AGCAGG-AG-CGACGGCAGCAGCAG-CA------------------------------------------GCCACAG--CAGCAACAGCA---------------------GCAG---------------C---AGCA---------------------------ACAGCAACAGCA---------ACAGCAACAG---------CAGCAGCAAC---------------AG---------------------------------CAGCAGCAACAGCAG------CAGCAGCCACAGCAGCAGCAACAGCAGCAACG---------------------------------ACAG---------------------------------CAGCAGCAGCAACGTCAGCAGCAG--CA------------------------------------------GCAACGACAACAACAGC------------------AAG---CAGTGCAGCAACAG---------------CA---------------------TC--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAG------CAGCAGCCACAGC................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAG------CAGCAGCCAC...................................................................................................................................................................................................................................................................2220.501010000
...............................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC---------------AG---------------------------------CAGCAGCAACAGCAG------CAGC.........................................................................................................................................................................................................................................................................2960.171010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAGCAGCCACAGCAGCAGC..........................................................................................................................................................................................................................................................2070.141010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAG------CAGCAGCC.....................................................................................................................................................................................................................................................................21160.132011000
..................................................................................................................................................................................................GCAGCAG-CA------------------------------------------GCCACAG--CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------CAGCAGCCACAGCAGC.............................................................................................................................................................................................................................................................2080.131000001
................................................................................................................................................................................................................................................................AGCAACAGCA---------------------GCAG---------------C---AGCA---------------------------ACAGCA................................................................................................................................................................................................................................................................................................................................................................................................25200.102011000
................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAC---------------AG---------------------------------CAGCAGCAACAGCAG------CA...........................................................................................................................................................................................................................................................................26130.081010000
...........................................................................................................................................................................................................................................................................................................................................................................CAGCAACAG---------CAGCAGCAAC---------------AG---------------------------------CAGCA.............................................................................................................................................................................................................................................................................................26130.081010000
..............................................................................................................................................................................................................................................................................................................................................................GCA---------ACAGCAACAG---------CAGCAGCAAC---------------AG---------------------------------C.................................................................................................................................................................................................................................................................................................26140.071010000
..........................................................................................................................................................................................................................................................................................................................................................AACAGCA---------ACAGCAACAG---------CAGCAGCAAC---------------.....................................................................................................................................................................................................................................................................................................................................27150.071000001
..............................................................................................................................................................................................................................................................................................................................................................................CAACAG---------CAGCAGCAAC---------------AG---------------------------------CAGCAGC...........................................................................................................................................................................................................................................................................................25200.051010000
........................................................................................................................................................................................................................................................................................................................CA---------------------------ACAGCAACAGCA---------ACAGCAACAG---------CAGC..........................................................................................................................................................................................................................................................................................................................................................28200.051010000
......................................................................................................................................................................................................................................................................AGCA---------------------GCAG---------------C---AGCA---------------------------ACAGCAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC---------------AG---------------------------------CAGCAGCAACAGCAG------A............................................................................................................................................................................................................................................................................26200.051100000
............................................................................................................................................................................................................................................................................................................................................................CAGCA---------ACAGCAACAG---------CAGCA.........................................................................................................................................................................................................................................................................................................................................................20200.051010000
...............................................................................................................................................................................................................................................................................................................................................................CA---------ACAGCAACAG---------CAGCAGCA......................................................................................................................................................................................................................................................................................................................................................20200.051100000
................................................................................................................................................................................................................................................................................................................................................................A---------ACAGCAACAG---------CAGCAGCAAC---------------AG---------------------------------C.................................................................................................................................................................................................................................................................................................24200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG------CAGCAGCC.....................................................................................................................................................................................................................................................................19200.051000001
.......................................................................................................................................................................................................................................................................................................................................................AGCAACAGCA---------ACAGCAACAG---------C.............................................................................................................................................................................................................................................................................................................................................................21200.051001000
.................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---------------AG---------------------------------CAGCAGCAACA.......................................................................................................................................................................................................................................................................................19200.051010000
.....................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCA---------ACAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................20200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------AG---------------------------------CAGCAGCAACAGCAG------CAGC.........................................................................................................................................................................................................................................................................25200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------AG---------------------------------CAGCAGCAACAGCA....................................................................................................................................................................................................................................................................................19200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC---------------AG---------------------------------CAGCAGCAACAGC.....................................................................................................................................................................................................................................................................................23200.051010000
droBip1
TCGGC--GGGCAGT--CTGG--GCGCT----------GCGAGCGGTAGCAGT---------------------------------------------GTGGGCGACTCGCTGTGG-------------------------------------------------------------AGC----AGTAGCGAAGCGCAGCAG-TTCCAGCAGCAACA---GCAA------------CAACAGCAGCAGGCCCAACA--ACAGCAGCA---------------------ACA-G--------------------------------------------------------------------------CAACACCATCACCAC---CAGCAAC---------------------------AACAACAGCTCCAGCAGCA------------------------------------------------GCAGC------------AAC---AACAG------------GCGCAGCAGCAACAACAACAG---------------------------------CAA---CAC--CA------------------------------------------TCACCACCACCAGCAACAG---------------GCAC---A------GACGGCG---------------CA---------------------GGCCSizeHit CountTotal NormTotal
No Reads
droKik1
TCTGC--ACCTGGC--CACG--CCGCA----------CCAGATGG-----------------------------------TC------------GCCGCGGGCGGTTCGCCGGTGAT----------------------------------------------------------G------CTT-CACCAGCAGCAGCAA-CA---------------GCA--------------------------------------------------------CCTTCAGCAGCAG---------------C---AGCAGCAGCATCATC---------------AACAGCAGCA---------------------------------------GCAACACCAACAGCAGCAGCAGCAGCAACACCAGCAACAGCAGCA------------------------------------ACA------------TCACC------------------------------------------------------------------------------------AACAGCAGCAGCAGCA--------------------------ACATCACCAGCAATTTGGCCAGCA------GC---------------------------------------AGCATCCCCACGCCCATCACCTGCACCACCACTCGCACCATCCGSizeHit CountTotal NormTotal
No Reads
droFic1
CAGTTCAA--CAAC-------------------------------------------------------------------------------------------------------------------A-----A--------G-----CCCTTCAACTTGGCGCAGTTGATCA-AGCAGC-AG-CAGCAGCAACGGCAG-CA---------ACTGCA---G------------CAGCAGCAACTGCAGCAG-----------CA---------------------A------------------------------------C---------------AACAGCAGCA------------GCAACAACAG---CAGCAA---CAACAGC------------------AGCAGCAACAGCAACAGCAGCAACTACAACAACAACAGCAG------CAACAGCA---------------------GCAGC------------AAC---AACAG------------CAACAG------------------------------------------------CAG---CAA--CT------------------------------------------ACAACAACAACAGCAGCAG---------------CAGC---A------GCAACTA---------------CA---------------------ACAASizeHit CountTotal NormTotal
No Reads
droEle1
CGA--CAG--CGGCGG--------------CTGC--------------------------------------------------------------------------------------------TGCGG---CTGCTGTTGAGAGTCGCTTGTT------------GGGTTT-G------CAG-CACCAGCAACAGCAA-CA---------------ACAGCAACATCAG-----------------------CAGCAACAACA---------------------G------CAACA---------TCAGCA------------------------------GCAACAACAGCAGCAGCAACAA------------------CAGCAAC------------------------AACAACAGCAACACCAACA------------GCAACATCAG---CAGCA---------------------GCAGC------------ACC---TACAA------------CAACAA------------------------------------------------CAA---CAA--CA------------------------------------------GCAACACCAACAGCAGCAA---------------CAAC---A------ACAACAG---------------CA---------------------ACCASizeHit CountTotal NormTotal
No Reads
droRho1
CAG--CAG--CAACAC-CCACAGATA-----T-----GCA---------------------------------------------------------GCGATATGTG---------------------------CAA----------------------CGGATACAGCAGAATT-ATC----AG-CACCTACAGCAACAT-CA---------------GCAGCAACAGCAG-----------------------CAGCAACAGCA---------------------G------------------------------------C---------------AACATCAGCAGCA---------ACAGCAGCAG---------CAGCAACAGC---------------AGCAGCAGCAGCAACAGCAGCAGCAACAGCAGCA-CAACAGCAG------CAGCCACA---------------------GCAGC------------AGC---AGCAA------------CTGCAA------------------------------------------------CTG---CAG--CA------------------------------------------GCAACAGCAACTGCAACAG---------------CAAC---A------GCAACTG---------------CA---------------------GCAGSizeHit CountTotal NormTotal
No Reads
droBia1
CGGTC--TG------------------------------------------TCTGATGGGCCACGAGCGGCGCCAGACGCTC-CACCTTATCCAGTCGCTGGCCGCCC--AG---GTGCTCTTC--AACA-----A-------------------------------------------------------GCAGG----------------AGAA---GCAA------------CAGCAGGAGCAGTACCAACA--GCAACAGCA---------------------GCA-G-----------------------CAT---------------------------CATCAT------------------------CATCAT---CAGCAGC------------------AGCAGCAGCAGCAGCAGCAGCAGCAAC---------AGCAACACCAG------CAGCA---TCA------------GCAGC------------------------------------------------------AGCAACACCAGCAGCAACGT---------------CAG---CAA--CAGTTCCTGGACC--------------------------------CAG----CGCAGCAGCAA---------------CAGC---A------GCAGCAG---------------CA---------------------GACASizeHit CountTotal NormTotal
No Reads
droTak1
CAGTC--TG------------------------------------------TCTGATGGGCCACGAGCGGCGCCAGACGCTC-CACCTTATCCAGTCGCTGGCCGCTC--AG---GTGCTCTAC--AACA-----A-------------------------------------------------------GCAGG----------------AGAA---GCAG------------CAGCAGGAGCAGTACCAGCA--GCAACAGCA---------------------GCA-G-----------------------CAT---------------------------CAGCAG------------------------CATCAG---CAGCATC---------------------AGCAACACCAGCAGCAGCAGCA------------------------------------ACG------------TCAGC------------------------------------------------------------------------------------AT--------------CAGTTCCTGGACCCAGCGCAGCAGCAACAGCAACAG------------CAGCA---GCAGCAGACACAGACGCAACAGCAGC---A------GCCGCAG---------------CA-------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGG--CGA--CACCAACTCG--GTGATGACCAACTTTTC------------TATGATGGACT-----CGCCGCCACA---GC-CA----------------------------------TCTTCGCAGCAGCAATT----------------------------------GC----------CTT-C-------------------AGC----CCA---------------GCAGCAGCAACAGCAGTCTCAGCA--GCAACAGCA---------------------------------------------ACAGCAGCAGCAACAACAGCAGCAGCAACAG-----------------------------------------------------------------------------GCAGCAGT-GCTGCAGC------------AA------------------GTCCA------------ACAGC------------------------------------AGCAG------------------------------------------------AAG---CAC--CA------------------------GCA---------------ACACCAAGTGCAGCAACAG---------------CAAC---A------GGTCCTG---------------CA---------------------TCAASizeHit CountTotal NormTotal
No Reads
dm3
TCTGC--ACCTGGC--CACG--CCGCA----------CCAGATGG-----------------------------------TC------------GCCGCGGGCGGTTCGCCGGTGAT----------------------------------------------------------G------CTT-CACCAGCAGCAGCAG-CA---------------GCAGCAACATCAG-----------------------CAGCAACAGCA---------------------G------CAACA---------GCAGCAGCAGCAGCATC---------------AACAGCAG---------------CAA------------------CAGCAGCAACATCAAC---------------------AGCAGCAGC---------------AGCAACATCAGCAGCAGCAGCAGCAACA------------CCACC------------------------------------------------------------------------------------AGCAACAGCAGCAGCA--------------------------TCATCACCAGCA------ATTTGGCCAGCAGC---------------------------------------AGCATCCCCATGCCCATCA---------------------CCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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droSim2
TCTGC--ACCTGGC--CACG--CCGCA----------CCAGATGG-----------------------------------TC------------GCCGCGGGCGGTTCGCCGGTGAT----------------------------------------------------------G------CTT-CACCAGCAGCAGCAG-CAACATCAGCAG--------------------------------------------CA---------------------------ACAG---------------C---AGCAGCAGCAGCATC---------------AACAGCAACAGCA---------GCAGCAACAT---------------------------------------------------------------------CAGCAGCAACAGCAG------CAGCAGCAACA------------CCACC------------------------------------------------------------------------------------AGCAACAGCAGCAGCA--------------------------TCATCACCAGCAATTTGGCCAGCA------GC---------------------------------------AGCATCCCCATGCCCATCACCTGCACCACCATGCCCACCACTCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CCACC------------------------------------------------------------------------------------AGCAACAGCAGCA................................................................................................................................................19111.0011000001100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA--------------------------TCATCACCAG.........................................................................................................1840.25100000000000100000
.................................................................................................................................................................................................................AGCAG--------------------------------------------CA---------------------------ACAG---------------C---AGCAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000000200000
....................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCA---------GCAGCAACAT---------------------------------------------------------------------..................................................................................................................................................................................................................................................................................................23100.10100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------------CAGCAGCAACAGCA....................................................................................................................................................................................................................................................................................15200.05100000000001000000
..........................................................................................................................................................................................CACCAGCAGCAGCAG-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000001000000000
...............................................................................................................................................................................................................TCAGCAG--------------------------------------------CA---------------------------ACAG---------------C---A....................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................ACAT---------------------------------------------------------------------CAGCAGCAACAGC.....................................................................................................................................................................................................................................................................................17200.05100000000001000000
.............................................................................................................................................................................................CAGCAGCAGCAG-CAACATCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000000100000
.......................................................................................................................................................................................................................................................................................................................................................AGCAACAGCA---------GCAGCAACA........................................................................................................................................................................................................................................................................................................................................................................19200.05100000000000100000
............................................................................................................................................................................................................ACATCAGCAG--------------------------------------------CA---------------------------ACAG---------------C---.....................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
CAG--ATG--CAGCAG--------------CAGCTGCACTACGAT----------------------------------T-CG---------------------------------------------------CAC----------------------CAGGAGCTGCAGTTCG-AGCAGC-AT-CAGCCGCACCAGTCG-CA---------------TCAGCAACATCAG-----------------------CAGCAG------------------------------------------------------------------------------------CAGCTGCA---------GCATCAGCAG---------CAGCAGCAGC---------------TGCAG---CATCAGCAG------------------CAGCAGCAACATCAG------CAGCAACAAAATCAGCAGCAGCAGCAGC------------TAC---AACAG------------CAACAT------------------------------------------------CAG---CAG--CA------------------------------------------GCAACAGCTGCAGCATCAG---------------CAGC---A------GCATCAG---------------CA---------------------GCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAG---------------CAGC---A------GCATCAG---------------CA---------------------....2340.2510010
..............................................................................................................................................................................................................................................................................................................................................................GCA---------GCATCAGCAG---------CAGCAGCAGC---------------.....................................................................................................................................................................................................................................................................................................................................23100.1010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAT------------------------------------------------CAG---CAG--CA------------------------------------------GCAACAG..........................................................................................21110.0910001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACATCAG------CAGCAAC......................................................................................................................................................................................................................................................................20130.0810010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAACAT------------------------------------------------CAG---CAG--CA------------------------------------------GCAACA...........................................................................................21160.0610010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAT------------------------------------------------CAG---CAG--CA------------------------------------------GCAACA...........................................................................................18200.0511000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT------------------------------------------------CAG---CAG--CA------------------------------------------GCAACAGC.........................................................................................19200.0510010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------CAACAT------------------------------------------------CAG---CAG--CA------------------------------------------GCAA.............................................................................................20200.0510001
droYak3
CGA--C------------------------------------CCATTGCCTT----------------------------------------------------------------------------CA-----A--------G-----CCCATT------------CCTTTCG-AGCCGG-ACTACCGCATC-----GCCTGCCAGCAGCAGCAGCA---G------------CACCAGCAGCAGCTGCAG--TTGCAACAGCAGCAGCATCAGCACCAGCAGCAGCAG---------------C---AGCA------GCAGC---------------AGCAGCAG---------------TTG------------------CAGCTGCAACACCAAC---------------------------------------------------------------AGCA---CCAGCAGCAGCAACAGCAGC------------------------------------AACAA------------------------------CATCATCAGCATCAGCATCAGCAGCAG--------------------------------------------------------------CAG---------------CAGC---A------GCAACAA---------------CA---------------------TC--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................CATT------------CCTTTCG-AGCCGG-AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................................................................................................................................................................................................................................................................AGCAGCATCAGCACCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20101000000000
.........................................................................................................................................................................................................................................................................................GCAGCAGCAG---------------C---AGCA------GCAGC---------------.......................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000000000
.................................................................................................................................................................................................................................................................GCAACAGCAGCAGCATCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10201000010000
................................................................................................................................................................................................................................................................................................CAG---------------C---AGCA------GCAGC---------------AGCAGCAG---------------................................................................................................................................................................................................................................................................................................................................................................................21200.10202000000000
..................................................................................................................................................................................................................................................................CAACAGCAGCAGCATCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10202000000000
..................................................................................................................................................................................................................................................................CAACAGCAGCAGCATCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200010010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---CCAGCAGCAGCAACAGC....................................................................................................................................................................................................................................................19200.10202000000000
...........................................................................................................................................................................................................................................................................................AGCAGCAG---------------C---AGCA------GCAGC---------------AGCAGCAG---------------T...............................................................................................................................................................................................................................................................................................................................................................................27170.06101000000000
.................................................................................................................................................................................................................................................................................CAGCACCAGCAGCAGCAG---------------C---.....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAGCAGC------------------------------------A............................................................................................................................................................................................................19200.05100010000000
..................................................................................................................................................................................................................................................................................................G---------------C---AGCA------GCAGC---------------AGCAGCAG---------------T...............................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG--------------------------------------------------------------CAG---------------CAGC---A------GCAACAA---------------...........................23200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAACAGCA...................................................................................................................................................................................................................................................18200.05100000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCAG--------------------------------------------------------------CAG---------------CAGC---A------GCAAC............................................23200.05100000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGC------------------------------------AAC..........................................................................................................................................................................................................20200.05100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG--------------------------------------------------------------CAG---------------CAGC---A------GCAACAA---------------C..........................24200.05100100000000
.................................................................................................................................................................................................................................................................GCAACAGCAGCAGCATCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
.................................................................................................................................................................................................................................................................GCAACAGCAGCAGCATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
droEre2
CAGACCAG--CGGCAA--------------CTTTCT-GCGACCCATTGCCTT----------------------------------------------------------------------------CA-----A--------G-----CCCATT------------CCGTTCG-AGCCGG-ACTACCGCATC-----GCCTGCCAGCAGCAGCAGCA---G------------CA------------TCAGCA--GCAACTGCA---------------------------------------------GTTGCAGCAACAAC------------------------------------------------------------AGCAGC------------------AGCAGCAACAGCAGCAGTTGCAGCTGCAGC------------------------------ACCA------------ACAGC------------------------------------AGCAA------------------------------------------------CAG---CAG--CA------------------------GCA---------------ACAGCAGCAGCAGCAGCAG---------------CAACATCA------GGCGCTG---------------CA-------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............AA--------------CTTTCT-GCGACCCATTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............................................................................................................................................................................................................GCAGCAGCAGCA---G------------CA------------TCAGCA--GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.55118000210
.................................................................................................................................................................................................................AGCAGCAGCA---G------------CA------------TCAGCA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.4590000270
....................................................................................................................................................................................................................AGCAGCA---G------------CA------------TCAGCA--GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.4080000350
....................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------AGCAGCAACAGCAGCAGTT...............................................................................................................................................................................................................................................................................................................2240.2510000100
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGTTGC.............................................................................................................................................................................................................................................................................................................1850.2010000010
..............................................................................................................................................................................................................AGCAGCAGCAGCA---G------------CA------------TCAGCA--GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1531000020
..............................................................................................................................................................................................................AGCAGCAGCAGCA---G------------CA------------TCAGCA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1531000020
...............................................................................................................................................................................................................................................................................................................................AACAAC------------------------------------------------------------AGCAGC------------------AGCAGCAACA........................................................................................................................................................................................................................................................................................................................22200.1020000020
.................................................................................................................................................................................................................AGCAGCAGCA---G------------CA------------TCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000020
...............................................................................................................................................................................................................GCAGCAGCAGCA---G------------CA------------TCAGCA--GC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020200000
...............................................................................................................................................................................................................GCAGCAGCAGCA---G------------CA------------TCAGCA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000020
.................................................................................................................................................................................................................AGCAGCAGCA---G------------CA------------TCAGCA--GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1021000010
..................................................................................................................................................................................................................GCAGCAGCA---G------------CA------------TCAGCA--GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000200
....................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------AGCAGCAACAGCAGCAGT................................................................................................................................................................................................................................................................................................................21120.0810000100
.............................................................................................................................................................................................................................................................................................................................GCAACAAC------------------------------------------------------------AGCAGC------------------AGCAGC............................................................................................................................................................................................................................................................................................................................20200.0510100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------------------------------CAG---CAG--CA------------------------GCA---------------ACAGCAGCA........................................................................................23200.0510000010
................................................................................................................................................................................................................CAGCAGCAGCA---G------------CA------------TCAGCA--G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------ACAGC------------------------------------AGCAA------------------------------------------------CAG---CAG--CA------------------------...................................................................................................................20200.0510001000
..................................................................................................................................................................................................................................................................................................................................AAC------------------------------------------------------------AGCAGC------------------AGCAGCAACAGCAGC...................................................................................................................................................................................................................................................................................................................24200.0510000010
..........................................................................................................................................................................................................................................................................................................................GCAGCAACAAC------------------------------------------------------------AGCAGC------------------AGCAGC............................................................................................................................................................................................................................................................................................................................23200.0510100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------AGCAA------------------------------------------------CAG---CAG--CA------------------------GCA---------------ACAGCAGCAGC......................................................................................29200.0510100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAG---------------CAACA..........................................................21200.0510000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAG---------------CAACA..........................................................22200.0510001000
...................................................................................................................................................................................................................................................................................................................................AC------------------------------------------------------------AGCAGC------------------AGCAGCAACAGC......................................................................................................................................................................................................................................................................................................................20200.0511000000
................................................................................................................................................................................................................................................................................................................................ACAAC------------------------------------------------------------AGCAGC------------------AGCAGCAACAGC......................................................................................................................................................................................................................................................................................................................23200.0511000000
..............................................................................................................................................................................................................AGCAGCAGCAGCA---G------------CA------------TCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
............................................................................................................................................................................................................................................................................................................................AGCAACAAC------------------------------------------------------------AGCAGC------------------AGCAGCAAC.........................................................................................................................................................................................................................................................................................................................24200.0510100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------CAG---CAG--CA------------------------GCA---------------ACAGCAGCAGCAGC...................................................................................26200.0511000000
............................................................................................................................................................................................................................................................................................................................AGCAACAAC------------------------------------------------------------AGCAGC------------------AGCA..............................................................................................................................................................................................................................................................................................................................19200.0511000000
...................................................................................................................................................................................................................CAGCAGCA---G------------CA------------TCAGCA--GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
.................................................................................................................................................................................................................................................................................................................................CAAC------------------------------------------------------------AGCAGC------------------AGCAGCAAC.........................................................................................................................................................................................................................................................................................................................19200.0510000010
.....................................................................................................................................................................................................................GCAGCA---G------------CA------------TCAGCA--GCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------ACAGCAGCAGCAGCAGCAG---------------C..............................................................21200.0510001000
...............................................................................................................................................................................................................GCAGCAGCAGCA---G------------CA------------TCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100
..................................................................................................................................................................................................................................................................................................................................AAC------------------------------------------------------------AGCAGC------------------AGCAGCAACAGCAGCA..................................................................................................................................................................................................................................................................................................................25200.0510001000

Generated: 05/17/2015 at 10:29 PM