ID:

dmo_5

 Coordinate:

scaffold_6540:34020305-34020362 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.1

Flybase annnotation

intron [Dmoj\GI10852-in]; utr5 [utr5_plus_9305]

No Repeatable elements found

Sense Strand Reads

ATATATATATACATACATACATATACGCTACGAGTTTCCTCATGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTTTTTAACGACTCCCTAACGGAGTCAGATTGAATTTCAGAGGACCCAGACAACGAAGAAGCGCGAGCACAAATGCAAATAAT

***********************************.(((((.((.(((((((.((((((((..(((((((((.((......)).)))))))))..)))))))).))))))).)))))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V056

head

 V049

head

 V110

male body		 M060

embryo

 M046

female body

 V041

embryo
..................................................AAATTGACTCTAGTAGGGAGT....................................................................................... 21 0 1 17995.00 17995 7736 4258 5063 349 242 347
..................................................AAATTGACTCTAGTAGGGAGTC...................................................................................... 22 0 1 12606.00 12606 6477 3229 840 1483 350 227
......................................................................................CTCCCTAACGGAGTCAGATTG................................................... 21 0 1 7028.00 7028 3708 2801 89 0 425 5
..................................................AAATTGACTCTAGTAGGGAGTCT..................................................................................... 23 1 1 1765.00 1765 979 453 101 124 99 9
..................................................AAATTGACTCTAGTAGGGAG........................................................................................ 20 0 1 755.00 755 369 196 106 19 64 1
..................................................AAATTGACTCTAGTAGGGAGTCA..................................................................................... 23 1 1 515.00 515 293 172 17 7 24 2
..................................................AAATTGACTCTAGTAGGGAGTCC..................................................................................... 23 0 1 252.00 252 77 61 11 92 7 4
.................................................CAAATTGACTCTAGTAGGGAGT....................................................................................... 22 0 1 238.00 238 75 37 93 12 21 0
......................................................................................CTCCCTAACGGAGTCAGATTGA.................................................. 22 0 1 190.00 190 86 47 1 7 46 3
.......................................................................................TCCCTAACGGAGTCAGATTGA.................................................. 21 0 1 141.00 141 67 53 1 3 13 4
..................................................AAATTGACTCTAGTAGGGAGTCG..................................................................................... 23 1 1 120.00 120 69 34 7 0 9 1
..................................................AAATTGACTCTAGTAGGGAGC....................................................................................... 21 1 1 116.00 116 22 17 5 71 0 1
.......................................................................................TCCCTAACGGAGTCAGATTG................................................... 20 0 1 112.00 112 35 33 2 0 42 0
...................................................AATTGACTCTAGTAGGGAGTC...................................................................................... 21 0 1 109.00 109 32 11 1 22 41 2
..................................................AGATTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 107.00 107 8 5 0 94 0 0
..................................................AAATTGACTCTAGTAGGGA......................................................................................... 19 0 1 104.00 104 39 30 23 0 11 1
......................................................................................CTCCCTAACGGCGTCAGATTG................................................... 21 1 1 97.00 97 25 71 0 0 1 0
..................................................AAATTGACTCTCGTAGGGAGT....................................................................................... 21 1 1 90.00 90 26 61 1 0 0 2
...................................................AATTGACTCTAGTAGGGAGT....................................................................................... 20 0 1 89.00 89 40 15 17 2 15 0
..................................................AAATTGACTCTAGTCGGGAGT....................................................................................... 21 1 1 81.00 81 18 61 0 1 0 1
..................................................AAATTGACTCTAGTAGGGAGTCTT.................................................................................... 24 1 1 73.00 73 38 12 3 11 9 0
..................................................AAATTGACTCTAGTAGGGGGT....................................................................................... 21 1 1 68.00 68 40 17 7 0 1 3
....................................................ATTGACTCTAGTAGGGAGTC...................................................................................... 20 0 1 63.00 63 27 10 0 19 7 0
..................................................AAATTGACTCTAGTAGGGCGT....................................................................................... 21 1 1 61.00 61 22 36 2 0 0 1
..................................................AAATTGACTCTAGCAGGGAGT....................................................................................... 21 1 1 59.00 59 42 14 1 0 0 2
......................................................................................CTCCCTAACGGAGTCAGATT.................................................... 20 0 1 56.00 56 19 15 2 0 20 0
..................................................AAATTGACTCTAGTAGGGAGTTT..................................................................................... 23 2 1 56.00 56 28 18 5 1 4 0
..................................................AAATTGACTCTCGTAGGGAGTC...................................................................................... 22 1 1 56.00 56 17 36 0 0 1 2
..................................................AAAGTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 55.00 55 36 11 0 8 0 0
..................................................AAATTGACTCTAGTAGTGAGT....................................................................................... 21 1 1 50.00 50 24 20 5 1 0 0
..................................................AAATTGACTCTAGTCGGGAGTC...................................................................................... 22 1 1 50.00 50 16 31 0 3 0 0
......................................................................................CTCCCTAACGGAGTCAGCTTG................................................... 21 1 1 48.00 48 12 36 0 0 0 0
..................................................AAATTGACTCTAGCAGGGAGTC...................................................................................... 22 1 1 47.00 47 29 12 2 3 0 1
....................................................ATTGACTCTAGTAGGGAGT....................................................................................... 19 0 1 46.00 46 18 12 7 3 6 0
..................................................AAATTGACTCTAGTAGGGAGGC...................................................................................... 22 1 1 45.00 45 19 14 0 11 0 1
.................................................CAAATTGACTCTAGTAGGGAGTC...................................................................................... 23 0 1 45.00 45 5 3 1 33 2 1
..................................................AAATTGACTCTAGTAGGGAGCC...................................................................................... 22 1 1 44.00 44 31 9 0 4 0 0
..................................................AAATTGACTCTAGTAGGGAGTT...................................................................................... 22 1 1 43.00 43 23 14 4 1 0 1
..................................................AAAGTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 42.00 42 16 6 0 20 0 0
..................................................AAATTGACTCTAGTATGGAGTC...................................................................................... 22 1 1 41.00 41 10 22 2 5 2 0
......................................................................................CTCCCTAACGGAGCCAGATTG................................................... 21 1 1 40.00 40 25 13 0 0 1 1
..................................................AAATTGACTCTAGTAGGGAGG....................................................................................... 21 1 1 39.00 39 24 11 2 1 0 1
..................................................AAATTGACTCTAGTAGTGAGTC...................................................................................... 22 1 1 39.00 39 18 18 1 1 0 1
..................................................AGATTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 39.00 39 8 7 3 20 1 0
..................................................AAATTGACTCTAGTAGGTAGTC...................................................................................... 22 1 1 38.00 38 21 13 0 4 0 0
......................................................................................CTCCCTAACGGAGTCCGATTG................................................... 21 1 1 37.00 37 4 33 0 0 0 0
..................................................AAATTGACTCTAGTAGGTAGT....................................................................................... 21 1 1 37.00 37 16 19 2 0 0 0
..................................................AAATTGACTCTAGTAAGGAGT....................................................................................... 21 1 1 35.00 35 13 17 5 0 0 0
..................................................AAATTGACTCTAGTAGGGCGTC...................................................................................... 22 1 1 33.00 33 16 16 0 0 0 1
..................................................AAATTGGCTCTAGTAGGGAGT....................................................................................... 21 1 1 33.00 33 17 9 6 1 0 0
..................................................AAATTGACTCTAGTAGGG.......................................................................................... 18 0 1 32.00 32 15 9 0 2 6 0
..................................................AAATTGACTCTAGTAGGGGGTC...................................................................................... 22 1 1 32.00 32 22 7 2 1 0 0
..................................................AAACTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 31.00 31 9 6 0 15 0 1
..................................................AAATTGACTCTATTAGGGAGT....................................................................................... 21 1 1 31.00 31 11 16 4 0 0 0
......................................................................................CTCCCTAACGGAGTCAGGTTG................................................... 21 1 1 30.00 30 19 11 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAGTCTTT................................................................................... 25 1 1 29.00 29 14 6 0 7 2 0
..................................................AAATTGACTCTAGTAGCGAGTC...................................................................................... 22 1 1 28.00 28 20 8 0 0 0 0
..................................................AAATTGACTCTAGAAGGGAGT....................................................................................... 21 1 1 28.00 28 22 5 0 0 1 0
..................................................AAATTGACTCTAGTATGGAGT....................................................................................... 21 1 1 28.00 28 3 13 11 0 0 1
..................................................AAATTGACTCTGGTAGGGAGT....................................................................................... 21 1 1 27.00 27 20 4 1 0 2 0
..................................................AAATTGACTCTATTAGGGAGTC...................................................................................... 22 1 1 27.00 27 12 11 1 2 0 1
..................................................AAATTGACTCTAGTAGGGTGT....................................................................................... 21 1 1 26.00 26 16 9 0 1 0 0
......................................................................................CTCCCTAACGGAGTCAGAGTG................................................... 21 1 1 26.00 26 14 12 0 0 0 0
......................................................................................CTCCCTAACGGAGTCAGATTGT.................................................. 22 1 1 26.00 26 14 9 1 1 1 0
..................................................AAATTGACTCTAGGAGGGAGT....................................................................................... 21 1 1 26.00 26 14 10 0 0 0 2
..................................................AAATTGACTCTAGTAAGGAGTC...................................................................................... 22 1 1 25.00 25 12 12 0 0 0 1
..................................................AAATTGACTCTAGTAGAGAGT....................................................................................... 21 1 1 25.00 25 11 13 1 0 0 0
..................................................AAATTGACTCTAGTAGCGAGT....................................................................................... 21 1 1 25.00 25 17 5 2 0 0 1
..................................................AAATTGACTCTAGTAGGGAGTTA..................................................................................... 23 2 1 24.00 24 15 5 3 1 0 0
.....................................................................................ACTCCCTAACGGAGTCAGATTGA.................................................. 23 0 1 24.00 24 8 1 0 2 13 0
..................................................AAATTGACTCTAGTAGGGT......................................................................................... 19 1 1 24.00 24 13 3 8 0 0 0
..................................................AAATTGACTCTAGTGGGGAGT....................................................................................... 21 1 1 23.00 23 9 11 2 0 0 1
..................................................AAATTGACTCTAGTAGGGAGTA...................................................................................... 22 1 1 23.00 23 14 5 0 4 0 0
..................................................AAATTGACTCTAGGAGGGAGTC...................................................................................... 22 1 1 23.00 23 13 10 0 0 0 0
......................................................................................CTCCCTAACGGAGACAGATTG................................................... 21 1 1 22.00 22 10 12 0 0 0 0
......................................................................................CTCCCGAACGGAGTCAGATTG................................................... 21 1 1 22.00 22 15 7 0 0 0 0
......................................................................................TTCCCTAACGGAGTCAGATTG................................................... 21 1 1 22.00 22 18 4 0 0 0 0
..................................................AAATCGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 21.00 21 15 3 2 1 0 0
......................................................................................ATCCCTAACGGAGTCAGATTG................................................... 21 1 1 21.00 21 13 8 0 0 0 0
......................................................................................CTACCTAACGGAGTCAGATTG................................................... 21 1 1 21.00 21 15 6 0 0 0 0
..................................................AAATTGACTCTAGTAGAGAGTC...................................................................................... 22 1 1 21.00 21 10 11 0 0 0 0
..................................................GAATTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 20.00 20 5 9 2 1 1 2
..................................................AAATTGACTCTAGTACGGAGTC...................................................................................... 22 1 1 20.00 20 12 8 0 0 0 0
......................................................................................CTCCCTAACGGAGTCAGATTT................................................... 21 1 1 19.00 19 4 15 0 0 0 0
..................................................AAATTCACTCTAGTAGGGAGT....................................................................................... 21 1 1 19.00 19 9 7 3 0 0 0
..................................................AAATTGACTATAGTAGGGAGT....................................................................................... 21 1 1 19.00 19 12 4 3 0 0 0
..................................................AAATTGACTCTAGAAGGGAGTC...................................................................................... 22 1 1 19.00 19 16 1 0 1 0 1
..................................................AAATTGACTCTAGTAGGCAGT....................................................................................... 21 1 1 19.00 19 9 7 0 0 0 3
..................................................AAACTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 18.00 18 10 4 2 2 0 0
..................................................GAATTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 18.00 18 8 9 0 0 0 1
..................................................AAATTGACTCTAGTAGGGAGA....................................................................................... 21 1 1 18.00 18 9 5 2 1 1 0
..................................................AAATTGACCCTAGTAGGGAGTC...................................................................................... 22 1 1 17.00 17 9 5 1 2 0 0
..................................................AAATTGACTCTAGTTGGGAGT....................................................................................... 21 1 1 17.00 17 7 9 1 0 0 0
..................................................AAATTGAATCTAGTAGGGAGTC...................................................................................... 22 1 1 17.00 17 9 2 0 6 0 0
......................................................................................CTCCCTAACGGGGTCAGATTG................................................... 21 1 1 16.00 16 9 5 0 0 2 0
......................................................................................CTCCCTAACGGAGTCACATTG................................................... 21 1 1 16.00 16 9 7 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAGAC...................................................................................... 22 1 1 16.00 16 8 1 0 7 0 0
..................................................AAATTGACTCTGGTAGGGAGTC...................................................................................... 22 1 1 16.00 16 12 1 0 1 2 0
..................................................AAATTTACTCTAGTAGGGAGT....................................................................................... 21 1 1 16.00 16 7 1 7 1 0 0
..................................................AAATTGGCTCTAGTAGGGAGTC...................................................................................... 22 1 1 16.00 16 8 6 0 2 0 0
......................................................................................CTCCCTAACGGAGGCAGATTG................................................... 21 1 1 15.00 15 6 9 0 0 0 0
..................................................AAATTGACTCCAGTAGGGAGTC...................................................................................... 22 1 1 15.00 15 10 4 0 0 0 1
..................................................AAATTGACTCTAGTACGGAGT....................................................................................... 21 1 1 15.00 15 9 6 0 0 0 0
..................................................AACTTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 15.00 15 0 0 0 14 0 1
..................................................AAATTGACCCTAGTAGGGAGT....................................................................................... 21 1 1 15.00 15 5 6 3 1 0 0
......................................................................................CTCCCTAACGGAGTCAGACTG................................................... 21 1 1 15.00 15 11 4 0 0 0 0
......................................................................................CCCCCTAACGGAGTCAGATTG................................................... 21 1 1 15.00 15 6 9 0 0 0 0
......................................................................................CTCCCTAACGGAGTCGGATTG................................................... 21 1 1 15.00 15 9 6 0 0 0 0
..................................................AAATTGACTCTAGTAGGGATT....................................................................................... 21 1 1 15.00 15 11 2 2 0 0 0
..................................................AAGTTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 15.00 15 6 8 1 0 0 0
..................................................AAATTGAATCTAGTAGGGAGT....................................................................................... 21 1 1 14.00 14 9 5 0 0 0 0
..................................................AAAATGACTCTAGTAGGGAGT....................................................................................... 21 1 1 14.00 14 5 2 1 6 0 0
..................................................AAATTGACTCTAGTCGGGAGTCT..................................................................................... 23 2 1 14.00 14 3 10 0 1 0 0
..................................................AAATTGACTCTAGTAGGGATTC...................................................................................... 22 1 1 14.00 14 12 1 0 1 0 0
....................................................ATTGACTCTAGTAGGGAGTCT..................................................................................... 21 1 1 14.00 14 6 7 0 1 0 0
.....................................................................................ACTCCCTAACGGAGTCAGATTG................................................... 22 0 1 14.00 14 2 3 0 0 9 0
......................................................................................CTCCCTAACGCAGTCAGATTG................................................... 21 1 1 14.00 14 9 5 0 0 0 0
..................................................AAATTCACTCTAGTAGGGAGTC...................................................................................... 22 1 1 13.00 13 8 3 0 2 0 0
......................................................................................CTCCATAACGGAGTCAGATTG................................................... 21 1 1 13.00 13 9 4 0 0 0 0
..................................................AGATTGACTCTAGTAGGGAGTCT..................................................................................... 23 2 1 13.00 13 1 2 0 10 0 0
..................................................ATATTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 13.00 13 1 0 0 12 0 0
..................................................AAATTAACTCTAGTAGGGAGT....................................................................................... 21 1 1 13.00 13 7 3 3 0 0 0
..................................................AAATTGACTATAGTAGGGAGTC...................................................................................... 22 1 1 13.00 13 8 3 1 0 0 1
..................................................AAATGGACTCTAGTAGGGAGT....................................................................................... 21 1 1 13.00 13 7 5 0 1 0 0
..................................................TAATTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 12.00 12 3 0 0 9 0 0
.....................................................TTGACTCTAGTAGGGAGTC...................................................................................... 19 0 1 12.00 12 0 3 0 7 2 0
..................................................AAATTTACTCTAGTAGGGAGTC...................................................................................... 22 1 1 12.00 12 3 0 1 8 0 0
......................................................................................CTCCCTAACGGACTCAGATTG................................................... 21 1 1 12.00 12 9 3 0 0 0 0
...................................................AATTGACTCTAGTAGGGAGTCC..................................................................................... 22 0 1 12.00 12 6 1 0 2 3 0
......................................................................................CTCCCTAACGGAGTCAGTTTG................................................... 21 1 1 12.00 12 7 5 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAGTTG..................................................................................... 23 2 1 12.00 12 6 5 0 0 1 0
..................................................AAATGGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 12.00 12 10 1 0 1 0 0
..................................................AAATTGACTCTAGTGGGGAGTC...................................................................................... 22 1 1 12.00 12 10 0 0 0 0 2
..................................................TAATTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 12.00 12 3 3 1 5 0 0
...................................................AATTGACTCTAGTAGGGAGTCT..................................................................................... 22 1 1 12.00 12 3 0 0 1 8 0
..................................................AAATTGACTCTACTAGGGAGT....................................................................................... 21 1 1 12.00 12 6 4 2 0 0 0
..................................................AAAATGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 11.00 11 2 1 0 8 0 0
......................................................................................CTCCCTAACGGAGTCAGATTGAA................................................. 23 0 1 11.00 11 3 2 0 1 5 0
......................................................................................CTCCCTAACAGAGTCAGATTG................................................... 21 1 1 11.00 11 2 9 0 0 0 0
..................................................AAATTGACTCTTGTAGGGAGT....................................................................................... 21 1 1 11.00 11 5 5 0 0 0 1
..................................................AAATTGACTCCAGTAGGGAGT....................................................................................... 21 1 1 11.00 11 6 2 1 0 1 1
..................................................AAATTGTCTCTAGTAGGGAGTC...................................................................................... 22 1 1 11.00 11 8 2 1 0 0 0
..................................................ATATTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 11.00 11 4 1 1 5 0 0
..................................................AAATTGACTCTCGTCGGGAGT....................................................................................... 21 2 1 11.00 11 1 10 0 0 0 0
....................................................ATTGACTCTAGTAGGGAGTCC..................................................................................... 21 0 1 11.00 11 4 6 1 0 0 0
..................................................AAATTGATTCTAGTAGGGAGTC...................................................................................... 22 1 1 10.00 10 7 3 0 0 0 0
..................................................AAATTGACTCGAGTAGGGAGT....................................................................................... 21 1 1 10.00 10 7 3 0 0 0 0
......................................................................................CTCCCTAACGGAGTCAGATTA................................................... 21 1 1 10.00 10 4 6 0 0 0 0
..............................................GATCAAATTGACTCTAGTAGGGAGTC...................................................................................... 26 1 1 10.00 10 1 0 0 9 0 0
......................................................................................CTCCCTAACGGAGTCAGATTGAT................................................. 23 1 1 10.00 10 6 4 0 0 0 0
..................................................ACATTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 10.00 10 2 7 0 0 0 1
......................................................................................CTCCCTACCGGAGTCAGATTG................................................... 21 1 1 10.00 10 4 6 0 0 0 0
..................................................AAATTGTCTCTAGTAGGGAGT....................................................................................... 21 1 1 10.00 10 5 2 3 0 0 0
..................................................AAATAGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 10.00 10 10 0 0 0 0 0
..................................................AAATAGACTCTAGTAGGGAGT....................................................................................... 21 1 1 10.00 10 9 0 1 0 0 0
..................................................AAATCGACTCTAGTAGGGAGT....................................................................................... 21 1 1 10.00 10 7 1 2 0 0 0
......................................................................................CTCCCTAACGGTGTCAGATTG................................................... 21 1 1 9.00 9 5 4 0 0 0 0
..................................................AAATTGCCTCTAGTAGGGAGTC...................................................................................... 22 1 1 9.00 9 6 3 0 0 0 0
......................................................................................CTCACTAACGGAGTCAGATTG................................................... 21 1 1 9.00 9 4 5 0 0 0 0
......................................................................................CTCCCTAACCGAGTCAGATTG................................................... 21 1 1 9.00 9 3 6 0 0 0 0
..................................................AAATTGACTCTAGTAGGGTGTC...................................................................................... 22 1 1 9.00 9 4 5 0 0 0 0
...................................................AATTGACTCTAGTAGGGAG........................................................................................ 19 0 1 9.00 9 2 1 0 0 6 0
..................................................AAGTTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 9.00 9 4 3 0 1 1 0
..................................................AAATTGACTCTAGTAGGAAGTC...................................................................................... 22 1 1 9.00 9 7 1 0 1 0 0
..................................................AAATTGACTCGAGTAGGGAGTC...................................................................................... 22 1 1 9.00 9 5 4 0 0 0 0
..................................................AAATTGACTCTACTAGGGAGTC...................................................................................... 22 1 1 9.00 9 4 3 0 2 0 0
..................................................AAATTGACTCTAGTAGGGAAT....................................................................................... 21 1 1 9.00 9 4 3 0 0 0 2
..................................................AAATTGACTCTCGTAGGGAGTCT..................................................................................... 23 2 1 9.00 9 2 7 0 0 0 0
..................................................AAATTGACTCTAGTAGGAAGT....................................................................................... 21 1 1 8.00 8 3 5 0 0 0 0
..................................................AAATTAACTCTAGTAGGGAGTC...................................................................................... 22 1 1 8.00 8 2 3 0 3 0 0
......................................................................................CTCCCTAACGGAGTCAGATCG................................................... 21 1 1 8.00 8 4 4 0 0 0 0
......................................................................................CTCCCTGACGGAGTCAGATTG................................................... 21 1 1 8.00 8 4 4 0 0 0 0
..................................................AAATTGACTCTAGTAGGGACTC...................................................................................... 22 1 1 8.00 8 6 1 1 0 0 0
..................................................AAATTGATTCTAGTAGGGAGT....................................................................................... 21 1 1 8.00 8 4 3 1 0 0 0
......................................................................................CTCCCTAACGGCGTCCGATTG................................................... 21 2 1 8.00 8 1 7 0 0 0 0
..................................................AAAGTGACTCTAGGAGGGAGTC...................................................................................... 22 2 1 8.00 8 4 4 0 0 0 0
..................................................AAATTGACTCTTGTAGGGAGTC...................................................................................... 22 1 1 8.00 8 6 1 0 0 0 1
......................................................................................CGCCCTAACGGAGTCAGATTG................................................... 21 1 1 8.00 8 5 3 0 0 0 0
..................................................AAATTGACTCTAGCAGGGAGTCT..................................................................................... 23 2 1 8.00 8 7 1 0 0 0 0
..................................................AAAGTGACTCTAGCAGGGAGTC...................................................................................... 22 2 1 8.00 8 5 3 0 0 0 0
..................................................AAATTGACTCTAGTAGGCAGTC...................................................................................... 22 1 1 8.00 8 5 2 0 1 0 0
..................................................AAATTGCCTCTAGTAGGGAGT....................................................................................... 21 1 1 8.00 8 5 2 0 0 0 1
..................................................AAATTGACTCTATTAGTGAGT....................................................................................... 21 2 1 8.00 8 3 5 0 0 0 0
..................................................ACATTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 8.00 8 4 3 0 0 0 1
......................................................................................CTCCCTAAAGGAGTCAGATTG................................................... 21 1 1 7.00 7 5 2 0 0 0 0
..................................................AAATTGACTCTAGTAGTGAGTCT..................................................................................... 23 2 1 7.00 7 0 3 1 3 0 0
......................................................................................CTCCCTAACGGATTCAGATTG................................................... 21 1 1 7.00 7 3 4 0 0 0 0
..................................................AAATTGACTCTAATAGGGAGT....................................................................................... 21 1 1 7.00 7 4 3 0 0 0 0
..................................................AAATTGACTCTAGTCGGGAGTCA..................................................................................... 23 2 1 7.00 7 0 7 0 0 0 0
..................................................AAATTGACTCTAGAAGGGAGTCT..................................................................................... 23 2 1 7.00 7 5 2 0 0 0 0
......................................................................................CTCCCTAGCGGAGTCAGATTG................................................... 21 1 1 7.00 7 4 3 0 0 0 0
......................................................................................CTCCCTAACGGAGTAAGATTG................................................... 21 1 1 7.00 7 4 3 0 0 0 0
..................................................AAATTGACTCTAGTAGGT.......................................................................................... 18 1 1 7.00 7 3 4 0 0 0 0
......................................................................................CTCCCTAACGGAGTCATATTG................................................... 21 1 1 6.00 6 5 1 0 0 0 0
.....................................................TTGACTCTAGTAGGGAGT....................................................................................... 18 0 1 6.00 6 1 1 2 1 1 0
..................................................AAATTGACTCTATTAGTGAGTC...................................................................................... 22 2 1 6.00 6 3 3 0 0 0 0
......................................................................................CTCCCTAACGGCGTCAGCTTG................................................... 21 2 1 6.00 6 1 5 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAT........................................................................................ 20 1 1 6.00 6 3 2 1 0 0 0
..................................................AAATTGACTCTAGTAGGGACT....................................................................................... 21 1 1 6.00 6 5 1 0 0 0 0
..................................................AAATTGACTCTAGTAGGGCGTCT..................................................................................... 23 2 1 6.00 6 3 3 0 0 0 0
..................................................AAATTGACTCTAGAACGGAGT....................................................................................... 21 2 1 6.00 6 2 4 0 0 0 0
..................................................AAATTGACTCTAGTATGGAG........................................................................................ 20 1 1 6.00 6 4 2 0 0 0 0
..................................................AAATTGACTCTAGTAGGTAG........................................................................................ 20 1 1 6.00 6 4 2 0 0 0 0
..................................................AAATTGACTTTAGTAGGGAGT....................................................................................... 21 1 1 6.00 6 1 3 2 0 0 0
......................................................................................CTCCCTAACGGAGTCAGAATG................................................... 21 1 1 6.00 6 1 5 0 0 0 0
..................................................CAATTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 6.00 6 2 3 0 0 0 1
..................................................AACTTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 6.00 6 2 4 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAGTCTA.................................................................................... 24 2 1 6.00 6 4 1 0 0 1 0
..................................................AGATTGACTCTAGTAGGGAGTCC..................................................................................... 23 1 1 6.00 6 0 0 0 6 0 0
......................................................................................CTCCCTAACGAAGTCAGATTG................................................... 21 1 1 6.00 6 5 1 0 0 0 0
..................................................AAAGTGACTCTAGCAGGGAGT....................................................................................... 21 2 2 5.50 11 9 2 0 0 0 0
......................................................................................CTCCCTCACGGAGTCAGATTG................................................... 21 1 1 5.00 5 1 4 0 0 0 0
..................................................AAATTGACTCTAGTCGGGCGT....................................................................................... 21 2 1 5.00 5 2 3 0 0 0 0
..................................................AAATTGACTCTAGCAGCGAGTC...................................................................................... 22 2 1 5.00 5 4 1 0 0 0 0
..................................................AAATTGACTCTAGTAGTGATT....................................................................................... 21 2 1 5.00 5 2 3 0 0 0 0
..................................................AAATTGACTCTTGTAGGGGGT....................................................................................... 21 2 1 5.00 5 4 1 0 0 0 0
..................................................AAACTGACTCTAGTAGGGAGTCT..................................................................................... 23 2 1 5.00 5 3 1 0 1 0 0
..................................................AAATTGACTTTAGTAGGGAGTC...................................................................................... 22 1 1 5.00 5 2 3 0 0 0 0
......................................................................................CTCCCGAACGGAGTCAGAGTG................................................... 21 2 1 5.00 5 1 4 0 0 0 0
..................................................AAATTGACACTAGTAGGGAGT....................................................................................... 21 1 1 5.00 5 1 1 3 0 0 0
..................................................AAATTGACTCTATAAGGGAGTC...................................................................................... 22 2 1 5.00 5 3 2 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAGTG...................................................................................... 22 1 1 5.00 5 3 0 0 1 0 1
..................................................AAATTGAGTCTAGTAGGGAGT....................................................................................... 21 1 1 5.00 5 3 1 0 0 0 1
......................................................................................CTCCCTAACGGCGTCAGGTTG................................................... 21 2 1 5.00 5 1 4 0 0 0 0
..................................................AATTTGACTCTAGTAGGGAGT....................................................................................... 21 1 1 5.00 5 2 0 3 0 0 0
..................................................AAAGTGACTCTAGTAGGGAGC....................................................................................... 21 2 1 5.00 5 3 2 0 0 0 0
..................................................AAATTGACTCTAGTAGGGGGG....................................................................................... 21 2 1 5.00 5 3 2 0 0 0 0
..................................................AAATTGACTCTATTATGGAGT....................................................................................... 21 2 1 5.00 5 2 3 0 0 0 0
..................................................AGATTGACTCTAGTAGGGAGC....................................................................................... 21 2 1 5.00 5 1 0 0 4 0 0
..................................................AAATTGACTCTAGTAGGGGGTCT..................................................................................... 23 2 1 5.00 5 4 1 0 0 0 0
..................................................AAATTGACTCTAGTTGGGAGTC...................................................................................... 22 1 1 5.00 5 4 0 0 1 0 0
..................................................AAATTGACTCTAGTAGGGAGTGT..................................................................................... 23 2 1 5.00 5 0 5 0 0 0 0
.................................................CAAATTGACTCTAGTAGGGAGTCT..................................................................................... 24 1 1 5.00 5 0 1 0 3 1 0
......................................................................................CTTCCTAACGGAGTCAGATTG................................................... 21 1 1 5.00 5 2 3 0 0 0 0
......................................................................................CTCCCTAACGGAGTCAGATGG................................................... 21 1 1 5.00 5 4 1 0 0 0 0
..................................................AAATTGACTCTAGAAGGGGGT....................................................................................... 21 2 1 5.00 5 4 1 0 0 0 0
......................................................................................CTCCCTAACGGAGTCAGAT..................................................... 19 0 1 5.00 5 1 0 0 3 1 0
..................................................AAAGTGACTCTAGTAGCGAGTC...................................................................................... 22 2 1 4.00 4 2 2 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAATC...................................................................................... 22 1 1 4.00 4 1 2 0 1 0 0
......................................................................................CTCCCTAACGGAGTCCGCTTG................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................AAATTGACTCTACTTGGGAGT....................................................................................... 21 2 1 4.00 4 1 3 0 0 0 0
.......................................................................................TCCCTAACGGAGTCAGATT.................................................... 19 0 1 4.00 4 2 2 0 0 0 0
......................................................................................CTCCCTAACGGCGTCCGCTTG................................................... 21 3 1 4.00 4 2 2 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAA........................................................................................ 20 1 1 4.00 4 1 1 1 0 1 0
......................................................................................CTCCCTAACGGAGTTAGATTG................................................... 21 1 1 4.00 4 2 1 1 0 0 0
..................................................AAATTGACTCTAGCAGGCAGTC...................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0
..................................................ACATTGACTCTCGTAGGGAGT....................................................................................... 21 2 1 4.00 4 1 3 0 0 0 0
..................................................AAATTGACTCTAGTAGGTAGTCT..................................................................................... 23 2 1 4.00 4 2 0 0 1 1 0
..................................................AAATTGTCTCTGGTAGGGAGT....................................................................................... 21 2 1 4.00 4 3 1 0 0 0 0
..................................................AAATTGACTCTAGTAGAGAG........................................................................................ 20 1 1 4.00 4 3 1 0 0 0 0
..................................................AAATTGACTCTAGTAGTGAG........................................................................................ 20 1 1 4.00 4 2 2 0 0 0 0
......................................................................................CTCCCTAACGGAGCCCGATTG................................................... 21 2 1 4.00 4 2 2 0 0 0 0
..................................................AAATTGACTCTAGCAGGGGGT....................................................................................... 21 2 1 4.00 4 1 2 0 0 0 1
......................................................................................CGCCCTAACGGAGTCAGTTTG................................................... 21 2 1 4.00 4 3 1 0 0 0 0
......................................................................................CTGCCTAACGGAGTCAGATTG................................................... 21 1 1 4.00 4 3 1 0 0 0 0
..................................................AAATTGACTCTAGTAGGGAGGA...................................................................................... 22 2 1 4.00 4 1 1 0 2 0 0
..................................................AAATTGACTCTAGGAGGGAGG....................................................................................... 21 2 1 4.00 4 1 3 0 0 0 0
..................................................AAATTGACTCTATTATGGAGTC...................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0
..................................................AAATTGACTCTAGTCGGGAG........................................................................................ 20 1 1 4.00 4 2 2 0 0 0 0
......................................................................................CTCCCTAACGGCGTCAGATTGA.................................................. 22 1 1 4.00 4 1 3 0 0 0 0
......................................................................................CTCCCTAATGGAGTCAGATTG................................................... 21 1 1 4.00 4 3 1 0 0 0 0
......................................................................................CTCCCTAACGTAGTCAGATTG................................................... 21 1 1 4.00 4 1 3 0 0 0 0
..................................................AAATTGACTCTAGTATGTAGTC...................................................................................... 22 2 1 4.00 4 3 1 0 0 0 0
..................................................AAATTGACTCTCGTAGGGCGT....................................................................................... 21 2 1 4.00 4 1 3 0 0 0 0
..................................................AAATTGACTCTAATAGGGAGTC...................................................................................... 22 1 1 4.00 4 1 3 0 0 0 0
..................................................AAATTGACACTAGTAGGGAGTC...................................................................................... 22 1 1 4.00 4 3 1 0 0 0 0
......................................................................................CTCTCTAACGGAGTCAGATTG................................................... 21 1 1 4.00 4 3 1 0 0 0 0
..................................................AAATTGCCTCTAGTAGGGCGT....................................................................................... 21 2 1 4.00 4 2 2 0 0 0 0
..................................................AAATTGACTCTCGGAGGGAGT....................................................................................... 21 2 1 4.00 4 2 2 0 0 0 0
..................................................AAAGTGACTCTAGGAGGGAGT....................................................................................... 21 2 1 4.00 4 1 3 0 0 0 0
........................................................................................CCCTAACGGAGTCAGATTG................................................... 19 0 1 4.00 4 1 1 0 0 2 0
..................................................AAATTGACTCTATTAGTGAGTCT..................................................................................... 23 3 1 4.00 4 1 3 0 0 0 0
......................................................................................CTCCCTAACGGAGTCAGATTC................................................... 21 1 1 4.00 4 3 0 0 0 1 0
......................................................................................CTCCCTAACGGAGTCAAATTG................................................... 21 1 1 4.00 4 1 3 0 0 0 0
...................................................AATTGACTCTAGTAGGGAGTCA..................................................................................... 22 1 1 4.00 4 0 1 0 0 3 0
..................................................AAATTGACTCTAGCACGGAGT....................................................................................... 21 2 1 4.00 4 1 3 0 0 0 0
..................................................AAAGTGACTCTAGTAGGGAGTCT..................................................................................... 23 2 1 4.00 4 2 0 0 2 0 0
..................................................AAATTGGCTCTAGTAGGGAGTCT..................................................................................... 23 2 1 4.00 4 0 4 0 0 0 0
..................................................AAATTGACTCTAGTAGGGTGTCT..................................................................................... 23 2 1 4.00 4 3 1 0 0 0 0
..................................................AAATTCACTCTAGTAGGGAGTCT..................................................................................... 23 2 1 4.00 4 1 0 0 3 0 0
..................................................AAATTGACTCTAGTATGTAGT....................................................................................... 21 2 1 4.00 4 2 2 0 0 0 0
..................................................AAATTGACTCTATTAGGGAGTCT..................................................................................... 23 2 1 4.00 4 1 3 0 0 0 0
......................................................................................CTCCTTAACGGAGTCAGATTG................................................... 21 1 1 4.00 4 3 1 0 0 0 0
..................................................AAATTGACTCTAGCAGCGAGT....................................................................................... 21 2 1 3.00 3 3 0 0 0 0 0
......................................................................................CTCCCTAACGGATACAGATTT................................................... 21 3 1 3.00 3 1 2 0 0 0 0
..................................................AAATTGACGCTAGTAGGGAGTC...................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0
..................................................AAATGGACTCTAGTAGGGCGT....................................................................................... 21 2 1 3.00 3 3 0 0 0 0 0
..................................................AAATTGCCTCTAGTAGTGAGTC...................................................................................... 22 2 1 3.00 3 2 1 0 0 0 0
..................................................AAAGTGACTCTGGTAGGGAGTC...................................................................................... 22 2 1 3.00 3 2 1 0 0 0 0
......................................................................................CTCCCCAACGGAGTCAGATTG................................................... 21 1 1 3.00 3 2 1 0 0 0 0
..................................................AAATTGACTCTGGTAGGGAG........................................................................................ 20 1 1 3.00 3 2 1 0 0 0 0
..................................................AAACTGACTCTAGAAGGGAGT....................................................................................... 21 2 1 3.00 3 2 1 0 0 0 0
..................................................CAATTGACTCTAGTAGGGAGTC...................................................................................... 22 1 1 3.00 3 0 2 0 0 0 1
..................................................AGATTGACTCTAGTAGGGAG........................................................................................ 20 1 1 3.00 3 0 1 0 2 0 0
..................................................AAATTGACTCTCGTAGGGTGT....................................................................................... 21 2 1 3.00 3 1 2 0 0 0 0
..................................................AAATTGACTCTAGTCGGGCGTC...................................................................................... 22 2 1 3.00 3 2 1 0 0 0 0
..................................................AAATTGACTCTAGTAGGGCG........................................................................................ 20 1 1 3.00 3 2 1 0 0 0 0
..................................................AAATTGACTCTAGTCGGGAGC....................................................................................... 21 2 1 3.00 3 2 1 0 0 0 0
..................................................AAATTGACTCTAGTAGGGGGTT...................................................................................... 22 2 1 3.00 3 1 2 0 0 0 0
..................................................AAATTGACTCTTGTAGGGTGT....................................................................................... 21 2 1 3.00 3 2 1 0 0 0 0
..................................................AAATTGACTCTAGTAGCGCGTC...................................................................................... 22 2 1 3.00 3 2 0 0 0 0 1

Anti-sense strand reads

TATATATATATGTATGTATGTATATGCGATGCTCAAAGGAGTACGTCAAGTTTAACTGAGATCATCCCTCAGGAAAAAAAATTGCTGAGGGATTGCCTCAGTCTAACTTAAAGTCTCCTGGGTCTGTTGCTTCTTCGCGCTCGTGTTTACGTTTATTA

************************************.(((((.((.(((((((.((((((((..(((((((((.((......)).)))))))))..)))))))).))))))).)))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 V056

head
...............................CTCAAAGGGGTACAACAAGTTTAA....................................................................................................... 24 3 1 1.00 1 1 0
.....................................................................................TGAGGGGTTATCTCAGTCTAA.................................................... 21 3 4 0.25 1 0 1
.................................................GTGTAACTGAGGTAATCCCTC........................................................................................ 21 3 4 0.25 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:34020255-34020412 + dmo_5 ATATATATATAC--------ATACA----------------------TAC--------------------------------------------------ATATACGC-------------------------------------TACG--A---GTTTCCTCATGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTTTTTAACGACTCCCTAACGGAGTCAGATTGAATTTCAGAGGACCCA-GACAACGAAGAAGCGCGAGCACAAATGC---A--AAT----------AAT
droVir3 scaffold_12822:1418779-1418935 + dvi-mir-929 GATTCGATTAAG--------ATCCA----------------------GG-----------------------------------------------------------CCAAGTG-CGAC-------------------------GCGT--G---AATTCCTGCCGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTT-CACGAGCGACTCCCTAACGGAGTCAGATTGAATTACAAAGGACCCA-GACAACGAGTAAAAATGTGC-CAAGTG----A--CAA----------AGT
droGri2 scaffold_15074:2468150-2468330 - dgr_3 TTTGTTGTGT--------------CCTCAAACAATGT---------------CCTCAATGT-------------T-AT----TT-G---AAAGT--------------------G-TGCC-------------------------CCCG--A---ACTTCCTGCTGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTAACGAGCGACTCCCTAACGGAGTCAGATTGAGTTACAAAGGACCAA-GTCAACAATGCCCC--------AG-TGA---TACAAGTGTTACAAATAAT
droWil2 scf2_1100000004902:9825554-9825738 - dwi_10 CTTTATTT---------------------------------------TG-CTTCT------------------CATTTTTTTTTTGTTATAAGTGCATAAGCATAATCTAAAGTG--GCT-------------------------TGAG--A---ACTTCCTGCGGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTATATAAGCGACTCCCTAACGGAGTCAGATTGAATTACAAAGGAACAACAACAACAAAAAGCC--------AC-GACCCAC--CAA----------AGT
dp5 2:24810818-24810983 - dps-mir-929 GTAATTGTGA-------------TT---------AGTGG--------------------------------------------------AAGGTGCATGCGCCCGATCCGAAGTG-------------------------------CAC--GGC-AATTCCTGCAGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTATTGAGCGACTCCCTAACGGAGTCAGATTGAATTACCAAGGAAC-A-GACAACAGTGGAGC--------GAAAGA---C--AAA---------GAAC
droPer2 scaffold_6:111428-111576 - dpe_8 GTGGAAG-------------------------------------------------------------------------------------GTGCATGCGCCCGATCCGAAGTGC-----------------------------ACGG--G---ATTTCCTGCAGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTATTGAGCGACTCCCTAACGGAGTCAGATTGAATTACCAAGGAAC-A-GACAACAGTGGAGC--------AAAAGA---C--AA-------------A
droAna3 scaffold_13340:11127677-11127831 + dan_5 TGAAAAGTGTTCTGAGATGCAGCTTCCCCA-GC----CACCA--------------------ACCAACCAACCA-----------------------------------------------------------------------AC-C--AACCACTTCCTGGCGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTAACGAGAGACTCCCTAACGGAGTCAGATTGAATTACAAAGGAGCGA-GACAACGAC-----------------------------------------
droBip1 scf7180000396691:36380-36536 + GTACTGAGA--------TGCGGCCT----------------------TCC----------------ACCAACCC-----------------------------------------------------------------------AC-C--AACCACTTCCTGGCGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTAACGAGCGACTCCCTAACGGAGTCAGATTGAATTACAAAGGAGCGA-GACAACGACTAAGGGGTT----GC-CC----AA-AAA--------GTGTT
droKik1 scf7180000302634:767696-767863 + ATATGTATA--------------TTCGCCAAGT----GAGTG---------------------------------------CC------------------CA-AATCGAGAGTG--ACCCGAGCAACGCCA-----------------------TGTTCCTGTCGGAGTTCAAATTGACTCTAGTAGGGAGTCCTTTGTACGAGCGACTCCCTAACGGAGTCAGATTGAATTACCAAGGAGAGA-GACAACAGTGAG-----------ATTCC---A--GAG----------AGT
droFic1 scf7180000454096:1242500-1242666 + GCTCGTGTGAAC-----------T-CTCAAATACAGTGAAGA------------------------------------ACGCG------------------------------------------------------CCGACTTTGA-G--AACGACTTCCTGACGCAGCTCAAATTGACTCTAGTAGGGAGTCCTTTTCTTGAGCGACTCCCTAACGGAGTCAGATTGAACTTCAAAGGAGCGA-GACATCGAGGGAGC--------GGCTGC---C--AAG----------TGC
droEle1 scf7180000491104:1857412-1857550 + CGGGGGGGGTAC-----------TCCGAAAGAACCGTGGA--------------------------------------------------------------------------GC-----------------------------GA-G--AAGGACTTCCTGGCGCAGCTCAAATTGACTCTAGTAGGGAGTCCTTTTCTCGAGCGACTCCCTAACGGAGTCAGATTGAGCTTCGAAGGAGCAA-GACATCGGGGA---------------------------------------
droRho1 scf7180000777910:14048-14212 - TTGTGA-AC--------------TCCGCAAATACTGTGAATTAGTCTTAC---------AT-------------T-AC----------------------------------GC-------------------------------GA-A--AACGACTTCCTGCCGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTCATGAGCGACTCCCTAACGGAGTCAGATTGATCTACAAAGGAGAGA-GACAACAA-GGAGC--------AGCTGC---C--AAA----------AGT
droBia1 scf7180000302098:364498-364661 - ATAGT--------------------------------GAATGTACCCAA-GTTCC------------------TA-TTGTCCT------------------------------------------------------TTGACATAACAG--AACTAAGTCCTGACGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTAATGAGCGACTCCCTAACGGAGTCAGATTGAACTTCAAAGGAGCGA-GACAACAAAGGAGC--------AACTGC---C--AAA----------AGT
droTak1 scf7180000414441:35422-35592 - GCAAA--------------------------TACAGTGAATGTGCCTTAC---------ATA---------CCTA-TTGTTCC------------------------------------------------------CTGACATAAGAG--AACCAATTCCTGGCGCAGCTCAAATTGACTCTAGTAGGGAGTCCTTTCAATGAGCGACTCCCTAACGGAGTCAGATTGAACTACAAAGGACCAA-GACAACAAAGGGAA--------ATCTTT---A--AAA----------AGT
droEug1 scf7180000409759:55679-55863 + TGTGGCATC--------------TGCACAAATACCGTGAATGTGATCTAT---------AA----------------------------AA--T--------------------A-AGTC-----------CTGTATCTGATATAGATGATAACA-AATCCTGACGCTGTTCAAATTGACTCTAGTAGGGAGTCCTTATATCGAGCGACTCCCTAACGGAGTCAGATTGAATTTCAAAGGAGCA--AACAACAAAGGAGC--------AGTTCT---T--AAA----------AGT
dm3 chr3R:121057-121194 + dme-mir-929 ATGTATGCA---------------------------------------------------A-------------T-CCATGCC------------------------------------------------------CTGACATGGCGG--AACC-AGTCCTGGTGGAGCTCAAATTGACTCTAGTAGGGAGTCCTTT-AATGAGCGACTCCCTAACGGAGTCAGATTGAGCTGCAAAGGAGCGA-CACAACAGAGGAGC--------AC--------------------------
droSim2 3r:105556-105701 + dsi-mir-929 ATATGTG-----------------------------------------------------A-------------T-ACGTGCC------------------------------------------------------CTGGCATGGCGC--AACC-AGTCCTGGTGAAGCTCAAATTGACTCTAGTAGGGAGTCCTTT-AATGAGCGACTCCCTAACGGAGTCAGATTGAGCTACAAAGGAGCGA-GACAACAGAGGAGC--------AC-TTA---A--AAA----------GGT
droSec2 scaffold_6:240402-240547 + dse_4 ATATGTG-----------------------------------------------------A-------------T-ACGTGCC------------------------------------------------------CTGACATGGCGC--AACC-AGTCCTGGTGAAGCTCAAATTGACTCTAGTAGGGAGTCCTTT-AATGAGCGACTCCCTAACGGAGTCAGATTGAGCTACAAAGGAGCGA-GACAACAGAGGAGC--------AC-TTA---A--AAA----------GGT
droYak3 3R:481076-481220 + dya_11 ACAT----------------------------------------------------------------------T-ACGTGCC------------------------------------------------------TTGAAATGGCAA--AACC-AGTCCTGGTGAAGCTCAAATTGACTCTAGTAGGGAGTCCTTT-AATGAACGACTCCCTAACGGAGTCAGATTGAGCTACAAAGGAGCGA-GACAACACAGGACC--------AC-TAAAAAA--AAA----------TGT
droEre2 scaffold_4770:470984-471150 + der_6 TTGGAGGTC--------------TTCGCAATCACAGTGAAAAAGCCATAC---------AT-------------T-ACGCGCC------------------------------------------------------TTGAAGTGGCGG--AACC-AGTCCTGGTGAAGCTCAAATTGACTCTAGTAGGGAGTCCTTC-CATAAGCGACTCCCTAACGGAGTCAGATTGAGCTACAAAGGAGCGA-GACAACACAGGTGC--------AC-------------------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATATATATATAC--------ATACA----------------------TAC--------------------------------------------------ATATACGC-------------------------------------TACG--A---GTTTCCTCATGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTTTTTAACGACTCCCTAACGGAGTCAGATTGAATTTCAGAGGACCCA-GACAACGAAGAAGCGCGAGCACAAATGC---A--AAT----------AATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................21117995.0017995242347425877363495063
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................22112606.0012606350227322964771483840
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2117028.007028425528013708089
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................2311765.001765999453979124101
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................201755.0075564119636919106
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................231515.00515242172293717
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................231252.002527461779211
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................221238.0023821037751293
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................221190.00190463478671
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................211141.00141134536731
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................231120.0012091346907
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................211116.00116011722715
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................201112.00112420333502
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................211109.001094121132221
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................191104.001041113039023
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................20189.00891501540217
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20163.0063701027190
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20156.0056200151902
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................23156.005640182815
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................19146.004660121837
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................23145.00452135331
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................22143.004301142314
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21139.003901112412
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................18132.00326091520
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................22126.00261091411
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................23124.00240051513
...............................................................................................................................................................................................................ACTCCCTAACGGAGTCAGATTGA..................................................................23124.00241301820
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................19124.00240031308
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22123.00230051440
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTT...................................................................21119.00190015400
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................21118.0018105912
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCT.....................................................................................................21114.0014007610
...............................................................................................................................................................................................................ACTCCCTAACGGAGTCAGATTG...................................................................22114.0014903200
...............................................................................................................................................................................TTGACTCTAGTAGGGAGTC......................................................................................................19112.0012203070
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCC.....................................................................................................22112.0012301620
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTG.....................................................................................................23112.0012105600
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................22112.0012800310
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................23111.0011502310
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCC.....................................................................................................21111.0011006401
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTA...................................................................21110.0010006400
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAT.................................................................23110.0010004600
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................1919.009601200
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................1817.007004300
...............................................................................................................................................................................TTGACTCTAGTAGGGAGT.......................................................................................................1816.006101112
............................................................................................................................................................................AAATTGACTCTAGTAGGGAT........................................................................................................2016.006002301
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTA....................................................................................................2416.006101400
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................2215.005010310
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTGT.....................................................................................................2315.005005000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTCT.....................................................................................................2415.005101030
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGAT.....................................................................1915.005100130
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATT....................................................................1914.004002200
............................................................................................................................................................................AAATTGACTCTAGTAGGGAA........................................................................................................2014.004101101
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGGA......................................................................................................2214.004001120
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTG...................................................................1914.004201100
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTC...................................................................2114.004100300
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................2214.004301000
droVir3
GATTCGATTAAG--------ATCCA----------------------GG-----------------------------------------------------------CCAAGTG-CGAC-------------------------GCGT--G---AATTCCTGCCGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTT-CACGAGCGACTCCCTAACGGAGTCAGATTGAATTACAAAGGACCCA-GACAACGAGTAAAAATGTGC-CAAGTG----A--CAA----------AGTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................21121160.0021160812426013739076391617227001931518321757637308248161002702325485216208600002120001000000000000108956380845209000000135141000001
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................22113334.00133342353731750486391036110001481759423859473423149851278931255359104703800016830000000000100000003187487651600000003100000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2117094.0070945303793020000000052231714733057424648117671001156180100010200000000000000000001828694200000001000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................2313781.003781027715317001410005682891813301972431482661612521224112010000073000000000000000000001053344001000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................2311766.001766007030411100000192134751708676017924100113551200000004000000000000000000074772700000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................2011607.001607915178413020700009561336974450566521111811270200001600000000000000000111693101003000110000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................221486.0048603431000000000035236297333058320000030110000000000000000000000000000145000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................231418.00418004601940030000392614282521843470001110133100800001210000000000000000000351900000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................231355.003550070003001000035281533302302569000001010010000020000000000000000000176400000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................201308.00308043111101302000050436205600000200200000004000000000000000000049811300100000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................181243.0024324527000000000009444530430000000000100000100000000000000000201126200000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................191225.002250782000000000095354416800000000000000001000000000000000000051183900000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................211168.00168024930003030000867125701320000000200000000060000000000000000000213700000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................221115.0011500400011010000126213740917000000000010000000000000000000000000029800000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................201109.00109033900000000000151154087000000000000000000000000000000000000034100000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................211108.001080100180002010000010010000000000000010000010000000000000000000166600000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................231107.0010700120000000000015449770711000000000000000000000000000000000000027400000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................19191.0091012000041100000021200020000000000000000100000000000000000000522200000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................21182.0082023000000100003405200260000000000000000000000000000000000001381500000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................21170.0070022000010000006415530106000001200000000000000000000000000000119100000001000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21162.0062418000001010000000000000000000000000000000000000000000000000134300000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................19152.005203800107020000020010102000000100000000010000000000000000000014900000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20148.0048011240000000000000022004300000000100000000000000000000000000001000000000000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAG........................................................................................................21138.003804200000000000610242031000000000010000000000000000000000000010100000000100000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAA........................................................................................................20136.003614200000000000100311030000000000000000000000000000000000000016400000000000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................22134.003400200000000000230210030000000000000000000000000000000000010111800000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................23132.003200210000000000231102032000000000000000000000000000000000000013200000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20132.003205113000000000011370100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22131.00310011000000000073210300300000010000000000000000000000000000005400000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................22121.00210000000100000011012103600000000000000000000000000000000000003200000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTA....................................................................................................24120.00200010000000000001133203300000000000000000000000000000000000002100000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................22120.00200040000000000021011002400010000001000000000000000000000000003000000000000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGG..........................................................................................................19120.00200410000000000020010100000000000000000000000000000000000000007300000001000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................18218.5037014000000000000112001002000000000000000000000000000000000000016000000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCC.....................................................................................................22118.00180000030000000000000001300000130001000002000000000000000000002200000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTG.....................................................................................................23118.00180310010000000010110001300000000000000000000000000000000000005100000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAC........................................................................................................20116.00163900000000000000000000000000000000000000000000000000000000004000000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................19115.00150050000000000020000001000000000000000000000000000000000000007000000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................23114.00140060000000000011010100100000000000000000000000000000000000003000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTG....................................................................................................24113.00130010000000000010021101100000000000000000000000000000000000004100000000000000000
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTG...................................................................18113.00130010000000000003011002200000000000000000000000000000000000003000000000000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGG...........................................................................................................18111.00110610000000000000000000200000000000000000000000000000000000002000000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAT.................................................................23111.00110000000000000033010001200000000000000000000000000000000000001000000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................22110.00100060000000000000100001100000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTT...................................................................2119.0090000000000000010001101100000000000000000000000000000000000013000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAT........................................................................................................2019.0090100000000000020001000100000000000000000000000000000000000003100000000000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................2319.0090011000000000020000101000000000000000000000000000000000000003000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGA..........................................................................................................1818.0080320000000000000000000100000000000000000000000000000000000002000000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTA...................................................................2118.0080000000000000001000001000000000000000000000000000000000000006000000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCC.....................................................................................................2117.0070000000100000000100101300000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................2217.0070100000000000000011002000000000000000000000000000000000000001100000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGC..................................................................2217.0070001000000000000101001000000000000000000000000000000000000003000000000000000000
...............................................................................................................................................................................TTGACTCTAGTAGGGAGTC......................................................................................................1917.0070121000000000000000001000000000000000000000000000000000000002000000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGAT.....................................................................1917.0071110000000000010000000000000000000000000000000000000000000001000000002000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAAA.......................................................................................................2117.0070200000000000000000101100000000000000000000000000000000000002000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCAA....................................................................................................2416.0060001000000000020010100100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTCT.....................................................................................................2416.0060020000000000000110001000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCT.....................................................................................................2116.0060000000000000010300000000000000001000001000000000000000000000000000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTC...................................................................2116.0060000000000000002000000000000000000000000000000000000000000004000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTGT.....................................................................................................2316.0060000000000000000100000300000000000000000000000000000000000002000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGC..........................................................................................................1816.0060400000000000000000000000000000000000001000000000000000000001000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCCT....................................................................................................2415.0050000000000000020000001100000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATT....................................................................1915.0050130000000000000010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGA.........................................................................................................2015.0050000000000000001011000000000000000000000000000000000000000002000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGG.........................................................................................................1915.0050100000000000000000000000000000000000000000000000000000000003100000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCCA....................................................................................................2415.0050000000000000000001200100000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTTT.....................................................................................................2415.0050110000000000001110000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAG........................................................................................................1815.0050040000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTC....................................................................................................2414.0040000000000000000000100000000010101000000000000000000000000000000000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAA.....................................................................................................2314.0040000000000000001101100000000000000000000000000000000000000000000000000000000000
droGri2
TTTGTTGTGT--------------CCTCAAACAATGT---------------CCTCAATGT-------------T-AT----TT-G---AAAGT--------------------G-TGCC-------------------------CCCG--A---ACTTCCTGCTGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTAACGAGCGACTCCCTAACGGAGTCAGATTGAGTTACAAAGGACCAA-GTCAACAATGCCCC--------AG-TGA---TACAAGTGTTACAAATAATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................2113522.0035222163306
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................221739.00739264475
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................201108.001085058
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................23169.00693633
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................20163.00632043
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................21137.0037334
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................19119.0019415
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................21119.0019163
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................23119.0019127
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................23116.001697
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................22115.0015114
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................22112.0012111
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................19110.001037
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................2218.00817
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................1917.00743
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................2315.00532
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................1914.00413
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................2114.00404
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................1813.00330
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................2013.00321
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................2313.00321
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................2012.00220
...............................................................................................................................................................................TTGACTCTAGTAGGGAGTC......................................................................................................1912.00211
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................2212.00211
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................2012.00211
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................2312.00220
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................2112.00211
............................................................................................................................................................................AAATTGACTCTAGTAGGGAA........................................................................................................2012.00202
...............................................................................................................................................................................TTGACTCTAGTAGGGAGT.......................................................................................................1812.00211
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................2111.00101
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCCT....................................................................................................2311.00110
..........................................................................................................................................................................TCAAATTGACTCTAGTAGGGAGTC......................................................................................................2411.00101
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGC..................................................................2211.00110
......GTGT--------------CCTCAAACAATGT---------------CCTC................................................................................................................................................................................................................................................2111.00110
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAAA................................................................2311.00110
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGA......................................................................1811.00110
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCCA....................................................................................................2411.00110
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCT.....................................................................................................2111.00110
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAG.................................................................2211.00101
...............................................................................................................................................................................TTGACTCTAGTAGGGAGTCT.....................................................................................................2011.00110
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................2211.00110
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAG.................................................................2311.00101
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGA.........................................................................................................2011.00110
.......................................................CAATGT-------------T-AT----TT-G---AAAGT--------------------G-TGC.................................................................................................................................................................................2111.00110
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................2211.00110
droWil2
CTTTATTT---------------------------------------TG-CTTCT------------------CATTTTTTTTTTGTTATAAGTGCATAAGCATAATCTAAAGTG--GCT-------------------------TGAG--A---ACTTCCTGCGGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTATATAAGCGACTCCCTAACGGAGTCAGATTGAATTACAAAGGAACAACAACAACAAAAAGCC--------AC-GACCCAC--CAA----------AGTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................21197883.00978834871623418839285424
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................22118888.0018888139161614764510329
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2112505.002505931529892162
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................2311953.001953655547811057
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................2311464.001464227472481140
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................201843.00843214247248485
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................201452.004522171150372
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................231365.003655262136277
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................211207.00207192614166
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................211191.00191224023142
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................231184.00184221057113
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................221145.0014503712123
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................191128.0012821515105
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................22188.008851902935
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................19186.008635211443
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................21183.008321202346
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................21177.0077000275
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21168.00682703335
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22166.00660001254
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................20161.00612210335
..........................................................................................................................................................................TCAAATTGACTCTAGTAGGGAGT.......................................................................................................23160.00601001346
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................19147.00470011432
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................22132.0032013325
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................23127.0027015417
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAA.................................................................22122.0022220810
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20118.001841067
............................................................................................................................................................................AAATTGACTCTAGTAGGGAC........................................................................................................20116.0016160000
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................18116.0016110113
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTGA..................................................................19115.0015101112
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20115.001565004
....................................................................................................................................................................................................................CTAACGGAGTCAGATTGA..................................................................18113.001350017
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................23112.001231026
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGAT.....................................................................19111.0011101000
...............................................................................................................................................................................TTGACTCTAGTAGGGAGT.......................................................................................................18110.001002125
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAA.....................................................................................................2319.00901008
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTA....................................................................................................2419.00900054
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................2318.00802006
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAT.................................................................2317.00740003
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................2217.00702032
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTG.....................................................................................................2316.00630102
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................2315.00500023
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCC.....................................................................................................2215.00501013
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAT.....................................................................................................2315.00500005
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCG.....................................................................................................2214.00403001
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCAA....................................................................................................2414.00402011
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................2214.00421001
..............................................................................................................................................................................ATTGACTCTAGTAGGGAG........................................................................................................1814.00430010
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTGT.....................................................................................................2314.00421001
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................1814.00400004
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTGA..................................................................2014.00401003
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................2214.00402002
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCA.....................................................................................................2113.00301002
............................................................................................................................................................................AAATTGACTCTAGTAGGGAT........................................................................................................2013.00300111
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAAA................................................................2313.00310011
.................................................................................................................................................TGAG--A---ACTTCCTGCGGCAGTTC............................................................................................................................2213.00320010
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAAT................................................................2313.00330000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................2213.00300111
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGG..................................................................2112.00220000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGA......................................................................1812.00202000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAAC................................................................2412.00220000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATT....................................................................1912.00210001
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTA...................................................................2112.00200002
dp5
GTAATTGTGA-------------TT---------AGTGG--------------------------------------------------AAGGTGCATGCGCCCGATCCGAAGTG-------------------------------CAC--GGC-AATTCCTGCAGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTATTGAGCGACTCCCTAACGGAGTCAGATTGAATTACCAAGGAAC-A-GACAACAGTGGAGC--------GAAAGA---C--AAA---------GAACSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................2117708.0077081231179704887436313240217
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................2216817.00681704234207144914467290417
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2112256.002256145612116168576000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................201968.0096808510731071764126
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................231846.0084607350604658032005
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................231785.0078501004231660137004
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................221739.0073904126146731002
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................211216.0021604532221431000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................211197.0019701611095174000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................231119.001190532172585000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................201114.0011402521244922000
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................19182.00820131364710011
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................20169.0069043000260000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................21154.005409026351001
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................19132.003207131191000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20130.003001128090000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21127.002700366120000
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................18126.002602120200001
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................23126.002601713140000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................22123.002302114060000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................23123.002302001182000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................22121.002102021160000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................23117.00170222092000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................19117.001703111011000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22116.00160242080000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................21115.001500000150000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................22113.001301000030000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20112.001201101000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................23111.00110501140000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................22110.00100200080000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................2219.0090700020000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCC.....................................................................................................2117.0070011050000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................2316.0060102030000
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................1916.0060000051000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAG........................................................................................................1815.0050101030000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................2215.0050000230000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAT........................................................................................................2014.0040000040000
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTG...................................................................1814.0040000040000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCC.....................................................................................................2214.0040000031000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAA........................................................................................................2014.0040001030000
...............................................................................................................................................................................TTGACTCTAGTAGGGAGT.......................................................................................................1814.0040002011000
..........................................................................................................................................................................TCAAATTGACTCTAGTAGGGAGTC......................................................................................................2414.0040002020000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGC..................................................................2214.0040000040000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAG........................................................................................................2113.0030100020000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTCT.....................................................................................................2413.0030002010000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCCT....................................................................................................2413.0030001011000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAA.................................................................2213.0030000111000
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTGA..................................................................1913.0030000030000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGAT.....................................................................1913.0030012000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGA.........................................................................................................1813.0030000030000
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................1813.0030000030000
...............................................................................................................................................................................TTGACTCTAGTAGGGAGTC......................................................................................................1912.0020200000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAA.....................................................................................................2312.0020100010000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAC........................................................................................................2012.0020002000000
............................................................................................................................................................................AAATTGACTCTAGTAGGTT.........................................................................................................1922.0040000040000
............................................................................................................................................................................AAATTGACTCTAGTAGGGATC.......................................................................................................2112.0020002000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGC.......................................................................................................2212.0020011000000
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTG...................................................................1912.0020200000000
droPer2
GTGGAAG-------------------------------------------------------------------------------------GTGCATGCGCCCGATCCGAAGTGC-----------------------------ACGG--G---ATTTCCTGCAGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTATTGAGCGACTCCCTAACGGAGTCAGATTGAATTACCAAGGAAC-A-GACAACAGTGGAGC--------AAAAGA---C--AA-------------ASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................21118343.0018343553216391365247632
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................22114511.001451156454414590201223
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2113906.00390607541277250941
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................2311722.00172201194781053171
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................2311689.0016890811478112567
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................2011010.0010101111312508177
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................221487.0048701513241470
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................211220.00220070711375
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................231196.001960104512426
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................201179.0017902051711
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................191114.00114036195333
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................201112.00112061285027
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................21167.00670008509
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................22147.004700092810
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................19146.004600023410
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................21143.004320019220
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................20142.004209014190
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21137.00371006300
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................23135.00350203264
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................21132.00320005225
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22131.00310019201
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................23127.002701051110
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCC.....................................................................................................21120.00200007130
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................18120.00201007120
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................22116.0016020446
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20115.00150202110
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................23111.0011000092
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................19111.0011000344
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................2219.009000450
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................1919.009110250
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................2219.009000270
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................1818.008100160
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCT.....................................................................................................2118.008000170
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCC.....................................................................................................2217.007000070
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAT.................................................................2315.005000140
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTC....................................................................................................2415.005000140
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................2215.005010211
............................................................................................................................................................................AAATTGACTCTAGTAGGGAA........................................................................................................2015.005010022
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAT.....................................................................................................2315.005000050
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAA.....................................................................................................2314.004000121
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTC...................................................................2114.004000130
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTT...................................................................2114.004000130
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGAA......................................................................................................2213.003000120
droAna3
TGAAAAGTGTTCTGAGATGCAGCTTCCCCA-GC----CACCA--------------------ACCAACCAACCA-----------------------------------------------------------------------AC-C--AACCACTTCCTGGCGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTAACGAGAGACTCCCTAACGGAGTCAGATTGAATTACAAAGGAGCGA-GACAACGAC-----------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................21148433.0048433611081034399564938113
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................22114519.00145195518048443511148687
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2115341.005341362121684463246
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................2313204.00320414328361082241
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................2311174.001174817437391681
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................201963.009631750403162376
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................201830.0083030060119648
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................231604.00604110117759356
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................221593.005933100518242
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................191366.003660002572269
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................211340.003400001865257
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................191315.003151001310291
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................231297.002976019936155
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................191252.002524028359104
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................231245.002454008824129
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................181220.002201110107299
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................211191.0019102002632113
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................181155.0015500059195
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................211155.0015553085359
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................221117.00117000491355
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................23184.0084011122644
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................20183.0083380012033
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21180.0080000232037
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTG.....................................................................................................23173.0073100271530
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................21163.006383016036
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22150.005001017131
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTT...................................................................21148.00480003144
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20143.004316002205
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................22128.002811121211
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20121.00210001614
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAT.....................................................................................................23115.00150005010
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................22114.0014000716
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................19114.0014000806
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTGT.....................................................................................................23113.0013000931
............................................................................................................................................................................AAATTGACTCTAGTAGGGAT........................................................................................................20113.0013000526
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAA.....................................................................................................23112.0012100317
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTC...................................................................21111.0011000407
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................23110.0010030115
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTA...................................................................2119.009000009
.............................................................................................................................................................................AATTGACTCTAGTAGGGA.........................................................................................................1818.008300401
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................2318.008210302
....................................................................................................................................................................................................................CTAACGGAGTCAGATTGA..................................................................1818.008000206
............................................................................................................................................................................AAATTGACTCTAGTAGG...........................................................................................................1718.008000800
............................................................................................................................................................................AAATTGACTCTAGTAGGGAA........................................................................................................2017.007100510
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAT.................................................................2317.007000403
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTGA..................................................................1917.007000007
...............................................................................................................................................................................TTGACTCTAGTAGGGAGT.......................................................................................................1816.006000015
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................2216.006100104
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGC..................................................................2216.006000600
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................2216.006110112
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTGA.....................................................................................................2316.006100302
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................2216.006100302
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCT.....................................................................................................2115.005000401
...........................................................................................................................................................................CAAATTGACTCTAGTAGGG..........................................................................................................1915.005100112
............................................................................................................................................................................AAATTGACTCTAGTAGGTT.........................................................................................................1915.005000203
............................................................................................................................................................................AAATTGACTCTAGTAGGAGT........................................................................................................20104.00400003235
droBip1
GTACTGAGA--------TGCGGCCT----------------------TCC----------------ACCAACCC-----------------------------------------------------------------------AC-C--AACCACTTCCTGGCGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTAACGAGCGACTCCCTAACGGAGTCAGATTGAATTACAAAGGAGCGA-GACAACGACTAAGGGGTT----GC-CC----AA-AAA--------GTGTTSizeHit CountTotal NormTotal
No Reads
droKik1
ATATGTATA--------------TTCGCCAAGT----GAGTG---------------------------------------CC------------------CA-AATCGAGAGTG--ACCCGAGCAACGCCA-----------------------TGTTCCTGTCGGAGTTCAAATTGACTCTAGTAGGGAGTCCTTTGTACGAGCGACTCCCTAACGGAGTCAGATTGAATTACCAAGGAGAGA-GACAACAGTGAG-----------ATTCC---A--GAG----------AGTSizeHit CountTotal NormTotal
No Reads
droFic1
GCTCGTGTGAAC-----------T-CTCAAATACAGTGAAGA------------------------------------ACGCG------------------------------------------------------CCGACTTTGA-G--AACGACTTCCTGACGCAGCTCAAATTGACTCTAGTAGGGAGTCCTTTTCTTGAGCGACTCCCTAACGGAGTCAGATTGAACTTCAAAGGAGCGA-GACATCGAGGGAGC--------GGCTGC---C--AAG----------TGCSizeHit CountTotal NormTotal
No Reads
droEle1
CGGGGGGGGTAC-----------TCCGAAAGAACCGTGGA--------------------------------------------------------------------------GC-----------------------------GA-G--AAGGACTTCCTGGCGCAGCTCAAATTGACTCTAGTAGGGAGTCCTTTTCTCGAGCGACTCCCTAACGGAGTCAGATTGAGCTTCGAAGGAGCAA-GACATCGGGGA---------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTGTGA-AC--------------TCCGCAAATACTGTGAATTAGTCTTAC---------AT-------------T-AC----------------------------------GC-------------------------------GA-A--AACGACTTCCTGCCGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTCATGAGCGACTCCCTAACGGAGTCAGATTGATCTACAAAGGAGAGA-GACAACAA-GGAGC--------AGCTGC---C--AAA----------AGTSizeHit CountTotal NormTotal
No Reads
droBia1
ATAGT--------------------------------GAATGTACCCAA-GTTCC------------------TA-TTGTCCT------------------------------------------------------TTGACATAACAG--AACTAAGTCCTGACGCAGTTCAAATTGACTCTAGTAGGGAGTCCTTTTAATGAGCGACTCCCTAACGGAGTCAGATTGAACTTCAAAGGAGCGA-GACAACAAAGGAGC--------AACTGC---C--AAA----------AGTSizeHit CountTotal NormTotal
No Reads
droTak1
GCAAA--------------------------TACAGTGAATGTGCCTTAC---------ATA---------CCTA-TTGTTCC------------------------------------------------------CTGACATAAGAG--AACCAATTCCTGGCGCAGCTCAAATTGACTCTAGTAGGGAGTCCTTTCAATGAGCGACTCCCTAACGGAGTCAGATTGAACTACAAAGGACCAA-GACAACAAAGGGAA--------ATCTTT---A--AAA----------AGTSizeHit CountTotal NormTotal
No Reads
droEug1
TGTGGCATC--------------TGCACAAATACCGTGAATGTGATCTAT---------AA----------------------------AA--T--------------------A-AGTC-----------CTGTATCTGATATAGATGATAACA-AATCCTGACGCTGTTCAAATTGACTCTAGTAGGGAGTCCTTATATCGAGCGACTCCCTAACGGAGTCAGATTGAATTTCAAAGGAGCA--AACAACAAAGGAGC--------AGTTCT---T--AAA----------AGTSizeHit CountTotal NormTotal
No Reads
dm3
ATGTATGCA---------------------------------------------------A-------------T-CCATGCC------------------------------------------------------CTGACATGGCGG--AACC-AGTCCTGGTGGAGCTCAAATTGACTCTAGTAGGGAGTCCTTT-AATGAGCGACTCCCTAACGGAGTCAGATTGAGCTGCAAAGGAGCGA-CACAACAGAGGAGC--------AC--------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................211991581.0099158100001000000000120400541800100322218867854765226190366626129591144813984182430831216000110000000000000000001020410000010018103316002274000000000000313412421125234341166112101500000010007914293813934503952360042343214000001845110294317110249465249406809767598110276233391164157128128211759157472900100527622000002483100340073120442102646109411751611694911033003010044435914716613524131327340525901194416293816247881922421871059547778841721830181112802811075959722371441693371036284827723772743125132028924296182542842541923835660532113738971304851274101405416952184618410136920671031472212548150863631728866556451088914266177153616532694112555556616351374852962724842979174126706021800
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................221142586.0014258600005000000100300220661000321586312941258143813701627131525121621611277947371012000000000000000000000001102950010000004124036001081921200001110300112210350372313752029000000000050820021321183615153610181240000080005088295805631599740116703251371333821155643723200011122228151710038054500000354800200187470348408404142083002182000111400192614854215143156114482936311545359688091822198891602402444156884521750464342411165523158442481312252017255351461328079494510648120672831081488855850185651853916661676258661467046059246149729516039856147321602163101129532560121899252075139812933911689103200
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................21143028.004302800007320001023030023000130113618195394476401000000101000011110003712130000000000000000032101012000000431817901759221411012141376101560374547424248161701110222371258340000001000201000000011000000000005000406366017712734252622583212001041529000001163100000010000000000000000002382000100105000000004842016620075954526426171202382160284791227424512124858442021616294732107062402150835618848421192209815011033451533021132401319163282651310613201105407149634032400
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droSim2
ATATGTG-----------------------------------------------------A-------------T-ACGTGCC------------------------------------------------------CTGGCATGGCGC--AACC-AGTCCTGGTGAAGCTCAAATTGACTCTAGTAGGGAGTCCTTT-AATGAGCGACTCCCTAACGGAGTCAGATTGAGCTACAAAGGAGCGA-GACAACAGAGGAGC--------AC-TTA---A--AAA----------GGTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
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............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................201791.00791651305658710102102000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................221744.007442025175001201346938100000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................211369.0036915402274168000001300001
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................181224.0022419326012010100000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................19192.00923820233921121100000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................23173.00735006000023273000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20162.00623710122100000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21161.0061505210000000300000
.........................................................................................................................................................CC-AGTCCTGGTGAAGCTC............................................................................................................................18153.0053462500000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................18142.0042420000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAT........................................................................................................20141.0041401000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGAT.....................................................................19138.0038271002800000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAC........................................................................................................20134.0034340000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................21134.0034322000000000000000
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................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................22130.003090122900120400000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................23129.0029001500202210700000
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................19125.0025240010000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGA......................................................................18124.0024000002400000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................20123.0023151030200000200000
............................................................................................................................................................................AAATTGACTCTAGTAGGGC.........................................................................................................19119.0019181000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................19117.0017131000300000000000
.......................................................................................................................................................AACC-AGTCCTGGTGAAGCTC............................................................................................................................20116.0016160000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................21111.001130020000004200000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20111.0011110000000000000000
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............................................................................................................................................................................AAATTGACTCTAGTAGGC..........................................................................................................1819.00990000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................1919.00990000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAG.................................................................2219.00922010100010200000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................2119.00990000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAGT................................................................2317.00730310000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................2317.00700010100004100000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAA........................................................................................................2016.00660000000000000000
....................................................................................................................................................C--AACC-AGTCCTGGTGAAGCTC............................................................................................................................2116.00650000100000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAG........................................................................................................2115.00530000200000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGA.........................................................................................................2015.00500000500000000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................2214.00400020000200000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGG...........................................................................................................1814.00430000000100000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGTTG.......................................................................................................2114.00440000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGA..........................................................................................................1814.00440000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................2014.00410000300000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................2313.00320000000100000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................2313.00300020000001000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAA.................................................................2213.00310000000020000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGCT........................................................................................................2013.00330000000000000000
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTGA..................................................................1913.00321000000000000000
...............................................................................................................................................................................TTGACTCTAGTAGGGAGTC......................................................................................................1913.00330000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAG........................................................................................................1813.00330000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................2313.00320000000001000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAGC................................................................2312.00210000100000000000
................................................................................................................................................................................TGACTCTAGTAGGGAGTC......................................................................................................1812.00210000000001000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATT....................................................................1912.00210000100000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGG.........................................................................................................1912.00220000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGATA.......................................................................................................2112.00220000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................2212.00200000000101000000
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTGA..................................................................2012.00220000000000000000
........................................................................................................................................................ACC-AGTCCTGGTGAAGCTC............................................................................................................................1912.00220000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGAT.........................................................................................................1922.00440000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAAA................................................................2312.00200200000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGA.........................................................................................................1812.00210000100000000000
....................................................................................................................................................................................................................CTAACGGAGTCAGATTGAA.................................................................1912.00220000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGAT.....................................................................1812.00210000100000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGT.........................................................................................................1811.00110000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAT........................................................................................................1911.00110000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGG.......................................................................................................1911.00110000000000000000
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTG...................................................................1911.00100000100000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAGA................................................................2311.00101000000000000000
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTGG..................................................................2011.00110000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGG.......................................................................................................2011.00110000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................2211.00100000000000100000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAT........................................................................................................2111.00110000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGAC.....................................................................1911.00110000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAAA.......................................................................................................2111.00110000000000000000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGC.......................................................................................................1911.00110000000000000000
..........................................................................................................................................................................TCAAATTGACTCTAGTAGGGAGT.......................................................................................................2311.00100000000000100000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAC........................................................................................................2111.00110000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAA.....................................................................................................2311.00101000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAGT................................................................2411.00100000000000100000
............................................................................................................................................................................AAATTGACTCTAGTAGGTC.........................................................................................................1911.00110000000000000000
.................................................................................................................................................................................GACTCTAGTAGGGAGT.......................................................................................................1611.00100000000001000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCC.....................................................................................................2211.00100000100000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGA.......................................................................................................2011.00110000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAAG.......................................................................................................2111.00110000000000000000
...................................................................................................................................................GC--AACC-AGTCCTGGTGAAGC..............................................................................................................................2011.00100000100000000000
..................................................................................................................................................................................ACTCTAGTAGGGAGT.......................................................................................................1511.00100000000001000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGATG.......................................................................................................2111.00110000000000000000
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTG...................................................................1811.00110000000000000000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................2211.00100000010000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGG.........................................................................................................1811.00101000000000000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGT..................................................................2111.00110000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTT...................................................................2111.00100000000000100000
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTGAGC................................................................2211.00100100000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................2211.00110000000000000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGC.......................................................................................................2011.00110000000000000000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAG.................................................................2311.00100000000000100000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTC....................................................................................................2411.00100000000000001000
...................................................................................................................................................GC--AACC-AGTCCTGGTGAAGCTC............................................................................................................................2211.00110000000000000000
...............................................................................................................................................................................TTGACTCTAGTAGGGAGG.......................................................................................................1811.00110000000000000000
droSec2
ATATGTG-----------------------------------------------------A-------------T-ACGTGCC------------------------------------------------------CTGACATGGCGC--AACC-AGTCCTGGTGAAGCTCAAATTGACTCTAGTAGGGAGTCCTTT-AATGAGCGACTCCCTAACGGAGTCAGATTGAGCTACAAAGGAGCGA-GACAACAGAGGAGC--------AC-TTA---A--AAA----------GGTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................211112939.0011293914612438375596600
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................22113992.0013992112119042428448
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................1917088.00708814177039
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2115632.005632145401205327
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................2015145.00514514469774585
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................2311437.00143725151447814
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................2311319.001319101101431056
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................201776.00776209813645
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................181478.00478001477
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................211442.00442218132281
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................221314.0031442717266
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................181281.00281206273
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................191274.002742521246
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................191210.002108305167
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................231186.0018642157104
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................211180.001800206154
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................221145.001452226358
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................21198.009851488
............................................................................................................................................................................AAATTGACTCTAGTAGGGC.........................................................................................................19188.008800088
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................20187.008763276
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................21181.008116074
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................23177.0077710951
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................22176.0076417253
............................................................................................................................................................................AAATTGACTCTAGTAGGGGT........................................................................................................20160.006000060
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................23155.0055110341
..........................................................................................................................................................................TCAAATTGACTCTAGTAGGGAGT.......................................................................................................23149.004904936
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAG.................................................................22145.0045121329
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21137.003735128
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20125.002560019
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22121.002111217
...............................................................................................................................................................................TTGACTCTAGTAGGGAGT.......................................................................................................18119.001900217
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................19117.001741012
............................................................................................................................................................................AAATTGACTCTAGTAGGGTT........................................................................................................20117.001700017
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20116.001630103
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................23116.001620410
.............................................................................................................................................................................AATTGACTCTAGTAGGGT.........................................................................................................18115.001500015
............................................................................................................................................................................AAATTGACTCTAGTAGGGG.........................................................................................................19114.001400014
............................................................................................................................................................................AAATTGACTCTAGTAGGAGT........................................................................................................201012.201220123107
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................22112.00120165
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................23112.00121227
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGA.......................................................................................................20111.001101010
............................................................................................................................................................................AAATTGACTCTAGTAGGGAT........................................................................................................20111.001101010
............................................................................................................................................................................AAATTGACTCTAGTAGGTT.........................................................................................................1929.001800018
............................................................................................................................................................................AAATTGACTCTAGTAGGGAA........................................................................................................2019.0090108
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................2318.0080017
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................2218.0080107
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTA....................................................................................................2418.0080008
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTG...................................................................1817.0072005
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGC.......................................................................................................2017.0070106
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCC.....................................................................................................2217.0071204
............................................................................................................................................................................AAATTGACTCTAGTAGGGTA........................................................................................................2017.0070007
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................2217.0070025
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTA...................................................................2116.0060006
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGT.........................................................................................................2016.0060006
............................................................................................................................................................................AAATTGACTCTAGTAGGAT.........................................................................................................1915.0050005
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAG........................................................................................................2115.0050104
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAG.................................................................2315.0050023
............................................................................................................................................................................AAATTGACTCTAGTAGGA..........................................................................................................1815.0050005
....................................................................................................................................................................................................................CTAACGGAGTCAGATTGA..................................................................1814.0040004
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAT.................................................................2314.0040004
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTGA..................................................................1914.0040013
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAGT................................................................2313.0030012
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGA.........................................................................................................2013.0031101
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGAT......................................................................................................2213.0031002
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTT...................................................................2113.0030003
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGC..................................................................2213.0030012
droYak3
ACAT----------------------------------------------------------------------T-ACGTGCC------------------------------------------------------TTGAAATGGCAA--AACC-AGTCCTGGTGAAGCTCAAATTGACTCTAGTAGGGAGTCCTTT-AATGAACGACTCCCTAACGGAGTCAGATTGAGCTACAAAGGAGCGA-GACAACACAGGACC--------AC-TAAAAAA--AAA----------TGTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................2219518.009518272171193264164957124560000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................2118797.0087971031275635291325426718830000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2114517.004517271803111536275280000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................2311529.0015292571093601049420000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................231858.0085842610010140543350000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................221639.0063911614619540420010
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................181389.00389804209021300000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................201375.00375491121270192300000
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................191183.0018391005011490000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................211161.0016119443438260000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................231161.0016106535256930000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................231149.001490610349990000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................211125.001257085022650000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................21180.008002465123300000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................20177.007712200223200000
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................19171.007131011024320000
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................18151.00518000103300000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................20148.00481132271670000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................19146.00461130142610000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................23137.0037034062220000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21135.0035804211730000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................22131.0031002071930000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20128.00281111041100000
.........................................................................................................................................................CC-AGTCCTGGTGAAGCTC............................................................................................................................18127.0027250200000000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................22127.0027026111070000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20126.002646106900000
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................23126.0026011921300000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22123.0023015141200000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTT...................................................................21118.0018000010800000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAG.................................................................22117.001700304810010
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................21116.001610026700000
.......................................................................................................................................................AACC-AGTCCTGGTGAAGCTC............................................................................................................................20115.001560701100000
..........................................................................................................................................................................TCAAATTGACTCTAGTAGGGAGT.......................................................................................................23115.001500201750000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................22113.001300028300000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGC..................................................................22112.0012000001200000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCC.....................................................................................................22111.001100101900000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................22111.001108001200000
...............................................................................................................................................................................................................ACTCCCTAACGGAGTCAGATTGA..................................................................2319.00900231300000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGT..................................................................2219.00900000900000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................2318.00800003500000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................2316.00601111200000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGAT.....................................................................1916.00650100000000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................1915.00511001200000
............................................................................................................................................................................AAATTGACTCTAGTAGG...........................................................................................................1715.00500000500000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTG.....................................................................................................2315.00510001210000
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................2215.00501300010000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTC...................................................................2115.00500000500000
...............................................................................................................................................................................................................ACTCCCTAACGGAGTCAGATTG...................................................................2215.00504000100000
............................................................................................................................................................................AAATTGACTCTAGTAGGGC.........................................................................................................1915.00520001200000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAT.....................................................................................................2314.00400000310000
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAT.................................................................2314.00400003100000
............................................................................................................................................................................AAATTGACTCTAGTAGGGG.........................................................................................................1914.00410000300000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGCT......................................................................................................2214.00400000400000
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTG...................................................................1814.00400001300000
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTGT.....................................................................................................2314.00401000300000
....................................................................................................................................................................................................................CTAACGGAGTCAGATTGA..................................................................1814.00420001100000
........................................................................................................................................................ACC-AGTCCTGGTGAAGCTC............................................................................................................................1914.00410300000000
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAGT................................................................2313.00310000200000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAG........................................................................................................1813.00310100100000
............................................................................................................................................................................AAATTGACTCTAGTAGGTT.........................................................................................................1913.00300000300000
droEre2
TTGGAGGTC--------------TTCGCAATCACAGTGAAAAAGCCATAC---------AT-------------T-ACGCGCC------------------------------------------------------TTGAAGTGGCGG--AACC-AGTCCTGGTGAAGCTCAAATTGACTCTAGTAGGGAGTCCTTC-CATAAGCGACTCCCTAACGGAGTCAGATTGAGCTACAAAGGAGCGA-GACAACACAGGTGC--------AC-------------------------TSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGT.......................................................................................................21155442.00554421928431354237051445570
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTC......................................................................................................22117077.001707724820626932331964117330
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTG...................................................................2116750.00675018411427714349880
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCA.....................................................................................................2312769.0027694724851922419920
............................................................................................................................................................................AAATTGACTCTAGTAGGGAG........................................................................................................2011565.001565313234115911370
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGA..................................................................2211530.0015301931343611580
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCT.....................................................................................................2311528.0015285116264202179600
............................................................................................................................................................................AAATTGACTCTAGTAGGGT.........................................................................................................1911427.001427004503413480
............................................................................................................................................................................AAATTGACTCTAGTAGGG..........................................................................................................181814.008144036067680
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGT.......................................................................................................201522.00522101171804130
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCG.....................................................................................................231361.00361160640652160
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGT.......................................................................................................191233.002332000182130
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTC......................................................................................................211231.00231233480131440
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGA..................................................................211135.00135414033840
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCC.....................................................................................................231130.001304320212890
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGC.......................................................................................................211122.001221129110890
............................................................................................................................................................................AAATTGACTCTAGTAGGGA.........................................................................................................191116.001163013520750
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTG...................................................................20190.00902101811490
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTA......................................................................................................22182.008201603720
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTT......................................................................................................22170.0070001228480
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGT.......................................................................................................22165.006520604530
............................................................................................................................................................................AAATTGACTCTAGTAGGT..........................................................................................................18254.00108001011060
..........................................................................................................................................................................TCAAATTGACTCTAGTAGGGAGT.......................................................................................................23149.004900216400
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGG.......................................................................................................21136.003641921190
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTT.....................................................................................................23135.0035302012180
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGA.......................................................................................................21127.002710211220
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTT...................................................................21125.002510400200
............................................................................................................................................................................AAATTGACTCTAGTAGGAGT........................................................................................................20224.004810305390
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATT....................................................................20123.002320000210
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTGA..................................................................19121.002100300180
.............................................................................................................................................................................AATTGACTCTAGTAGGGAG........................................................................................................19121.002120204130
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAG.................................................................22120.00201092080
....................................................................................................................................................................................................................CTAACGGAGTCAGATTGA..................................................................18120.002000000200
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAA.................................................................23118.00182090070
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAT.....................................................................................................23115.001500104100
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTA.....................................................................................................23115.00150040290
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGC..................................................................22115.001500150000
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTC......................................................................................................20115.001521100110
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTAA.....................................................................................................23114.001400001130
...............................................................................................................................................................................TTGACTCTAGTAGGGAGT.......................................................................................................18113.001300000130
...........................................................................................................................................................................CAAATTGACTCTAGTAGGGAGTC......................................................................................................23112.00122400150
............................................................................................................................................................................AAATTGACTCTAGTAGGGAT........................................................................................................20112.00121010190
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCA.....................................................................................................22110.00105000050
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAT.................................................................2319.0090050040
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCAA....................................................................................................2418.0085000030
...................................................................................................................................................................................................................CCTAACGGAGTCAGATTG...................................................................1818.0080010070
..............................................................................................................................................................................ATTGACTCTAGTAGGGAG........................................................................................................1818.0081010150
.............................................................................................................................................................................AATTGACTCTAGTAGGGAGTCT.....................................................................................................2217.0072000230
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTG......................................................................................................2217.0070030040
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCAC....................................................................................................2416.0060010230
.............................................................................................................................................................................AATTGACTCTAGTAGGGT.........................................................................................................1816.0061000050
............................................................................................................................................................................AAATTGACTCTAGTAGGGC.........................................................................................................1916.0060000060
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCTA....................................................................................................2415.0050000050
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTCGA....................................................................................................2415.0050020030
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTGA..................................................................2015.0050120020
............................................................................................................................................................................AAATTGACTCTAGTAGGGTT........................................................................................................2015.0050010040
............................................................................................................................................................................AAATTGACTCTAGTAGGGTA........................................................................................................2015.0050000050
..................................................................................................................................................................................................................CCCTAACGGAGTCAGATTG...................................................................1915.0051000040
............................................................................................................................................................................AAATTGACTCTAGTAGGGG.........................................................................................................1915.0050000050
..............................................................................................................................................................................ATTGACTCTAGTAGGGAGTCT.....................................................................................................2114.0040200110
...............................................................................................................................................................................TTGACTCTAGTAGGGAGTC......................................................................................................1914.0040110020
.................................................................................................................................................................................................................TCCCTAACGGAGTCAGATTGAAA................................................................2314.0040000040
............................................................................................................................................................................AAATTGACTCTAGTAGGGAGTTG.....................................................................................................2314.0040000130
................................................................................................................................................................................................................CTCCCTAACGGAGTCAGATTGAG.................................................................2314.0040030010

Generated: 09/08/2015 at 07:31 PM