ID:

dmo_498

 Coordinate:

scaffold_6328:1699116-1699266 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.0 -21.8 -21.8

Flybase annnotation

exon [dmoj_GLEANR_16907:19]; CDS [Dmoj\GI16177-cds]; intron [Dmoj\GI16177-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus+
mature
  1. scaffold_4402:228-254 +
  2. dmo_498  scaffold_6328:1699194-1699220 -
  3. scaffold_6498:2624192-2624218 -
  4. scaffold_6500:30047902-30047928 -
  5. scaffold_6500:30828015-30828041 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CATACATACGGACGGACGAACGGACAGATAGATGGACAGGGCTAACACGACTTAGGTTGTCGCCCTGATCAAGTATTTATGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATAGTTTTAACAAAACCATTATACCCTGATTTCCCATTTTCAATGGTTTTTCTCCTTCATATTGACTGATTTCTTTTGTCTGTGCCGCAGCCCGTGCCGCCGTCGCCGTCGCTGCTGAAGCCACCGAACATTTTCAGCGG
**************************************************...((((.((.((...((((..((....))..)))).)).))))))....((((.(((((........)))))((((((((......((......)).....))))))))........((((..(((.((.....)).)))))))..))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V056
head
 V110
male body		 M060
embryo
 V049
head
..............................GAAGGACGGGACTAACAC........................................................................................................................................................................................................... 18 3 18 7.11 128 118 0 9 0 1
..........................................................................................................................................................................................TTGTCCGTGTCGCAGCGCGTG............................................ 21 3 3 0.33 1 0 1 0 0 0
.............................AGAAGGACGGGACTAACAC........................................................................................................................................................................................................... 19 3 9 0.22 2 2 0 0 0 0
................................................................................................CCTTCTGCCTGTTACATAGTTTTAACA................................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0
................................TGCACAGGGGTATCACGAC........................................................................................................................................................................................................ 19 3 8 0.13 1 0 1 0 0 0
..............................GAAGGACAGGACTAACACC.......................................................................................................................................................................................................... 19 3 13 0.08 1 1 0 0 0 0
.................................................................................................CTTGTGCGTGTTACATCGTTT..................................................................................................................................... 21 3 16 0.06 1 0 1 0 0 0
.................................................................................................CTTGTGCTTGTTACAGAGTTTT.................................................................................................................................... 22 3 19 0.05 1 0 1 0 0 0
.......................................................................................GCCACGCCTCCTTCTGCCTGTTAC............................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
...................................................................................................................TTTTAACAAAACCATTATACC................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0
...........................................................................................................................AAACCATTATACCCTGATTTCC.......................................................................................................... 22 0 20 0.05 1 0 0 0 1 0
.................................................................................................CTTCTTCCTGTTACACAGTCTT.................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 1
............................................................................TTATGGGGTCTGCCACGCCT........................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

GTATGTATGCCTGCCTGCTTGCCTGTCTATCTACCTGTCCCGATTGTGCTGAATCCAACAGCGGGACTAGTTCATAAATACCCCAGACGGTGCGGAGGAAGACGGACAATGTATCAAAATTGTTTTGGTAATATGGGACTAAAGGGTAAAAGTTACCAAAAAGAGGAAGTATAACTGACTAAAGAAAACAGACACGGCGTCGGGCACGGCGGCAGCGGCAGCGACGACTTCGGTGGCTTGTAAAAGTCGCC
**************************************************...((((.((.((...((((..((....))..)))).)).))))))....((((.(((((........)))))((((((((......((......)).....))))))))........((((..(((.((.....)).)))))))..))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
...............................................................GGACTAGTTCATAAATACCCCA...................................................................................................................................................................... 22 0 1 1.00 1 1 0 0
.............................................................................................GGAGGAAGACGGACAATG............................................................................................................................................ 18 0 20 0.15 3 3 0 0
.....................................................................................................................................TGGGACTAAAGGGTAAAA.................................................................................................... 18 0 20 0.15 3 0 3 0
...........................................................................................................................................................CCAGAACGAGGAACTATAAC............................................................................ 20 3 7 0.14 1 0 1 0
.............................................................................................GGAGGAAGACGGACAATGTATC........................................................................................................................................ 22 0 9 0.11 1 0 0 1
.....................................................................................................................AATTGTTTTGGTAATATGGGAC................................................................................................................ 22 0 20 0.05 1 1 0 0
...........................................................................AAATACCCCAGACGGTGCGG............................................................................................................................................................ 20 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6328:1699066-1699316 - dmo_498 CATAC----ATACGGACGGACGAACGGACAGATAGATGGACAGGGCTAACACGACTTAGGTTGTCGCCCTGATCAAGTAT---------TTATGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATAGTTTTA--------ACAAAACCATTATACCCTGATTTCCCATTTTCAA-------TGGTTTTTCTCCTT------------------------------------------------------------------------------------CATATTGACTGAT----TTC---------------------TTTT----------------------------------GTCTGTGCCG-CAGCCCGTGCC---------------GCCGTC---------------GCCGTC------GC-TGCTGA-------AGC----------------CACCGAACATTTTCA-GCGG
droVir3 scaffold_13050:551567-551823 + CATACATACGGACGAACGGACGGACGAACAGACAGACGGACATGGCTAGATCGACTCAGCTATTGGTGCTGATCAAGAATAGATATACTTTATGGGGTCGGAGATGCTTCCTTCTGCATGTTACATACATTTGAATTTTACACAAATACAATATACCCTTATACCC-ATTTTTAATGGGTTCAGGGTATAATAATAACTCTGCTTTTGCGT------------------------------------------------------------------------------------------------------------------------------------------------------CTGGCCAA-CTGACTGTGCC---------------TGCT-----------------G-ATTCATCGTCGATTGCTCA-TGCC-----------------------------------------
droGri2 scaffold_15203:2616662-2616824 + CATAC----AG----ACGGACAGACGGACGGACAGACGGACATTGCTATAGCGCCTTGGC---TGACCCTAATCAAGAATATATATACTTTATGGGGTCGGAGATGCTTCCTTCAGCCTGTTACATACATTTG-------TACAAAACCATTATACCCTTTTTACCCATTT-------TTAATGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:2702401-2702602 - CATAC----GGACAGACGGTCAGACGGACGGACAGACGGACATGGCTAGATCGACTCGGTTGTTGATCCTGATCAAGAATATATATACTTTGTGGGGTCGCAGATGCTTCCTTCTGCCTGTTACATACATTTT-------GGCGACTCTAATATACCATTTCACCCTA-------TGGGTGTATGGTATAAAAACA----------------------------------------------------------------------------------------------GAT----CTCATTT-------------------------------------------------------ACTTCTGCTG-CT---------------------------------------------G-----------------------------------------------------------------C
dp5 Unknown_group_8:162516-162766 + -----------ACGGACAGACGGACGGACGGACAGACAGACATGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATACACTTTTACCACAAATCTAATATACCCCAATACTC-ATTT----TGAGTGTCGGGTACAAAAATC---------------TCTTCAAAATACACTAGG---------------------C-----------------------------------------------------------TAGGAAATCTTTT-------------------------------------------CCG-CAGGCCATGGC---------------ACGGGC---------------AACACC------AC-CGCCAAC-----------------------A---CC---------------A
droPer2 scaffold_42:606169-606423 - ---AC----AGACGGACGGACGGACGGACGGACAGACAGACATGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATACACTTTTACCACAAATCTAATATACCCCAATACTC-ATTT----TGAGTATCGGGTACAAAAATC---------------TCTTCAAAATACACTAGG---------------------C-----------------------------------------------------------TAGGAAATCTTTT-------------------------------------------CCG-CAGGCCATGGC---------------ACGGGC---------------AACACC------AC-CGCCAAC-----------------------A---CC---------------A
droAna3 scaffold_13335:2611975-2612170 - CGTAG----AAACGGACAGACGGACAGACGGACAGACGGACATGCTCATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTTTG-------ACCAAAATTATAATACCCTC------TG----CAA--------GGGTATAAAAACA------------------------------------TTCT--------------------------------------------T---------------------TTATTGACTTTGAATTT--TTTT-------------------------------------------------------------------------------------------------------------------GTC-----------------------------------------
droBip1 scf7180000396459:28388-28547 - CAGAC----AGACAGACGAACAGACAGACGGACAGACGGACATGCTCATATGAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCATCACTGCGTTGCACACTTTTG-------ACCAAAATTATAATACCCTC------TT----CAA--------GGGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000300685:1465-1698 + CGTAG----AAACAGACAGACGGACAGACAGACAGACGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTTTCCTTCACTGCGTTGCAAACTTCTG-------ACTGAAATTATAATACCCT--------G----CAA--------GGGTATAAAAATT-----------------TTGTAATTAGACTTAGCTGCT-----------------------------------------------------------------------------------CCTTGT-------------------------------------------CCT-CGGTC---------------GTCGCTGCTGTCGTCACTGCCGCTGTAG-----------------------------T----------------TGTT---------------G
droFic1 scf7180000454040:426823-427030 - CATAG----AAACAGACAGACGGACCGACGGACAGACGTACAGACGGATTTCGATTCAGATCGTGATGCTGATCAAGAATATATATACTTTATAGGGTCTAAGGTGCCTCCTTCACTCCGTTGCAAACTTTTG-------ACTGAAATTATAATACCATTTTGCTCTG----CAA--------GGGTATAAAAAGGCTTTAAATTTCATGTTC--------------AA-------------------------------------------------------TTAACGGAT----TAC---------------------TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000488601:912-1185 - CAGAC----GGACAGACGGACGGACAGACGGACAGACGGACATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTCTG-------ACTGAAATTATAATACCCTC------TG----CAA--------GGGTATAAAAATC-------------------------AAACT------TTCCTTTATTGAGTTGGATTAAGAACTAAC-TT------ACTTAGATT--------------------GAACAA-TTGT----------TTTTATAGCTAC---------------GC-----------------GTCG---------------CTCCATCGCTGCCGCCGTCTCTGCCGCTGTTG-----------------------------------------------------------------A
droRho1 scf7180000772986:993-1248 - GAAAC----AGACAGACGTACAGACAGACGGACAGACGGACATGGCTATAGCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTTTG-------AA--AAATCATCTTTTCTTT--------------------ATTGAGTT-----------------------------------------------------------GGATTAAGAACTAACTTT------AATTAAGCT--------------------AAACAA-TTATTCA---------TTATGACTAC---------------GC-----------------GTCG---------------TTCCATCGCTGCCGCCGTCTCTGCCGCTGTTGCTGCT------TC-TGCTAA----------------------------------------------
droBia1 scf7180000300664:2548-2763 + CTTAC----------------GGACAGACAGACATACGGACATGGCTAGATCTACTCGGCTAGTGATCCTGATCAACAATATATATACTTTATGGGGTCGGAAACGCTTACTTCTACCTGTTTC----------------GACTAATCTAGTATAGTGTTATATAGTAATT-------------------------------------------------------TAGTCGTTCCTTTTAAGTT-----------------------------------TTTATTTGGGGTTTT----A---------------------TTTT----------------------------------ATT---------------TGGT---------------TGGAGC---------------AGCAAT------GT-TGCCGTA-----------------------A---CG---------ATCGTTG
droTak1 scf7180000415324:52508-52743 - ---AC----AGACGGACAGACGGACAGACGGACAGACGGACATGGCTAGATAGACTCGGCTATTGGTGCTGATCAAGAATATATATACTTTATGTGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACATCTG-------ACTGAAATTATAATACCCTC------TA----CAA--------GGGTATAAAAAAA------------------------------------------------------------------------------------A------------TT-----GTTTAACGC----------------------------------------------------CTGTGCGA-GGA---------------CCAGCGCCGGCAACGCC---------------CG-------AG-TCCAAA-------GGG----------------CACCGGACATCTGCA-GCAG
droEug1 scf7180000409074:6856-7079 - CATAC----------------GGACAGACGGACAGACGGGCATGGCTCATTCGTCTTCGCTATTCATCCTGATCAAGAATATATATACTTTATAGGGTCGGTAACGCTTCCTTCTACCTGTTACATACTTTTC-------AACGAATCTAGTATACCCTTTTATTCTA-------CGTGTAACGGGTATAATTTGT------------------------------------------------------------------------------------T------------TTATT-----------------CTTTTTTTTA--------GCAGCCGGCGTGTGCGTGTCTCGCCTCC----------------------------------TCC----------------------------------TGCCGCC-----------------------T---CC---------------G
dm3 chr3L:23184396-23184573 - CATAC----GG----ACAGACAGATAAACGGACAGACGGACATGGATAGATCGACTCGGCTCTTGATCCTGATCAAGAATATATTTACTTCGTATAGTCGGAATAG--TCTTTCTGCCTGTTACATACTTTTC-------AAAGAATCTAGTATACCCTTATACCCTT-------CGATTAACGGGTATAATTATA------------------------------------------------------------------------------------T------------AT-------------------------------------------------------------------------------------------------------------------------------------------------ATT-----------------------------------------
droSim2 x:20717917-20718075 + CATAT----------------GAACGGACAGAGAGACGGACACGGCCAGATCAACTGGGCTATTGATCCTGATCAA---------------ATGTGGTTGAAAACGCTTCCTTCTCCCTGTTACATGCTTCTT-------AACGAATCAAGTATACCCTTTTACTTC------TA--------GAAT-------TC---------------TCTT---------------------------------------------------------------------TTGTCTTAT----TT---------------------CTTCT-------------------------------------------G-T-----------------------------------------------------------------------------------------------------------------
droSec2 scaffold_176:40244-40425 - CATAC------------------------GGACAGATGGACAGGGCTAGATCGACTCGGCTATTGATCCTAATCAACAATATATGTACATTATATAGTTGGAAACGCTTCCTTCTGCCTGTTATATACTTTTA--------ACGAATCCAGTATACCATATTATATTA-------CCATTATATATTATA-------------------------------------------------------------------------TTATATAT---------A------------TT-----ATATAT-ATTA-----TTTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------G
droYak3 v2_chr3L_random_072:37662-37940 - CATACGGACAGACGGACAGACAGACAGACGGACAGACGGACATGGCCAGATCGACTCGACTATTGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACATACTTTTC-------AACGAATCTAGTATACCCTTTTACTCTA-------CGAGTAACGGGTATAATTATAACTGAAGTT------------------------------------------------------------------------GCT--------------------TTACAT-GTTTTGGTGGTATTT------------------------------------------------------ATGCCACCAGCTCCGTCGCTGCCTCTG-------------------------------CTCA-CGTCGGAGCTGTTGGTTGCCGTCAG--CG---------CT-CCCG
droEre2 scaffold_4845:16095415-16095631 + CATAC----GGACGGACAGACAGACGAACGGACAAACAGACATGACCAGATCGAATCGGCTATTGATCCTGATCAAGAATATGTATACTTTATACGGTCGGAAACGCTTTCTTCTCCCTGTTACATACTCTTC-------AACGCATCTAGTATACCCTTTTACTCTA-------CGAGTAACGGGTATTATAAAT------------------------------------------------------------------------------------A------------TT-----ATTTATTATTG-----TTTCTTTTT--------G----------------------------TATCCCG-CTGACCGT----------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CATAC----ATACGGACGGACGAACGGACAGATAGATGGACAGGGCTAACACGACTTAGGTTGTCGCCCTGATCAAGTAT---------TTATGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATAGTTTTA--------ACAAAACCATTATACCCTGATTTCCCATTTTCAA-------TGGTTTTTCTCCTT------------------------------------------------------------------------------------CATATTGACTGAT----TTC---------------------TTTT----------------------------------GTCTGTGCCG-CAGCCCGTGCC---------------GCCGTC---------------GCCGTC------GC-TGCTGA-------AGC----------------CACCGAACATTTTCA-GCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................CCTTCTGCCTGTTACATAGTTTTA--------ACA....................................................................................................................................................................................................................................................................................................................................................2750.201100000
....................................................................................................GCCACGCCTCCTTCTGCCTGTTAC........................................................................................................................................................................................................................................................................................................................................................................24200.051100000
................................................................................................................................TTTTA--------ACAAAACCATTATACC.......................................................................................................................................................................................................................................................................................................................................21200.051000010
................................................................................................................................................AAACCATTATACCCTGATTTCC..............................................................................................................................................................................................................................................................................................................................22200.051000010
.........................................................................................TTATGGGGTCTGCCACGCCT.......................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
droVir3
CATACATACGGACGAACGGACGGACGAACAGACAGACGGACATGGCTAGATCGACTCAGCTATTGGTGCTGATCAAGAATAGATATACTTTATGGGGTCGGAGATGCTTCCTTCTGCATGTTACATACATTTGAATTTTACACAAATACAATATACCCTTATACCC-ATTTTTAATGGGTTCAGGGTATAATAATAACTCTGCTTTTGCGT------------------------------------------------------------------------------------------------------------------------------------------------------CTGGCCAA-CTGACTGTGCC---------------TGCT-----------------G-ATTCATCGTCGATTGCTCA-TGCC-----------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................TGCC---------------TGCT-----------------G-ATTCATCGTCGATTGC.................................................2511.001000000000000000000000000001000000000000000000000000000000000000
..............................................................TTGGTGCTGATCAAGAATAGATATACT...........................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCT-----------------G-ATTCATCGTCGATTGC.................................................2011.001000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCT-----------------G-ATTCATCGTCGATTGCTCA-.............................................2411.001000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................G-ATTCATCGTCGATTGCTCA-T............................................2111.001000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCT-----------------G-ATTCATCGTCGATTGCTCA-TGC..........................................2711.001000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................TTAATGGGTTCAGGGTATAATAATAACT.............................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................TATACTTTATGGGGTCGGAGATGC.........................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000000000002100000000000000000000000000000
..................................................................................ATATACTTTATGGGGTCGGAGA............................................................................................................................................................................................................................................................................................................................................................................................22200.153000000000000000000003000000000000000000000000000000000000000000
............................................GCTAGATCGACTCAGCTATTGGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2590.111000000000000000000000000000000000010000000000000000000000000000
.............................................CTAGATCGACTCAGCTATTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111000000000000000000000000000000000000000000000000000000000000100
...........................................................................................ATGGGGTCGGAGATGCTTCCTT...................................................................................................................................................................................................................................................................................................................................................................................22200.102000000002000000000000000000000000000000000000000000000000000000
.........................................................................................TTATGGGGTCGGAGATGCTTCC.....................................................................................................................................................................................................................................................................................................................................................................................22200.102100000000000000000000000000000000000010000000000000000000000000
............................................................................................TGGGGTCGGAGATGCTTCCTTC..................................................................................................................................................................................................................................................................................................................................................................................22200.102000000000200000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CC-ATTTTTAATGGGTTCAGGGTA........................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000200000000000000000000000000000000000000
.........................................ATGGCTAGATCGACTCAGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002000000000000000000000000000000000000000000000000000000000
.............................................CTAGATCGACTCAGCTATTGGTGCTCC............................................................................................................................................................................................................................................................................................................................................................................................................................27140.071000000000000000000000000000001000000000000000000000000000000000
.................................................................................................TCGGAGATGCTTCCTTCTGCATGTTACA.......................................................................................................................................................................................................................................................................................................................................................................28160.061001000000000000000000000000000000000000000000000000000000000000
........................................................................................TTTATGGGGTCGGAGATGCTTCCTT...................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000100000000000000000000000000000000
..........................................................................................TATGGGGTCGGAGATGCTTCCT....................................................................................................................................................................................................................................................................................................................................................................................22200.051000000001000000000000000000000000000000000000000000000000000000
................................CAGACGGACATGGCTAGATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000000000000000000000000000000000000000000000000000000000000
..........................................................................................TATGGGGTCGGAGATGCTTCC.....................................................................................................................................................................................................................................................................................................................................................................................21200.051010000000000000000000000000000000000000000000000000000000000000
............................................GCTAGATCGACTCAGCTATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................C-ATTTTTAATGGGTTCAGGG..........................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................CGAACAGACAGACGGACATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000100000000000000000000000000000000000000000000000000
...............................................................................................GGTCGGAGATGCTTCCTT...................................................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................TTATGGGGTCGGAGATGCTTC......................................................................................................................................................................................................................................................................................................................................................................................21200.051000010000000000000000000000000000000000000000000000000000000000
................................CAGACGGACATGGCTAGATCGACTCAGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................30200.051000000000000000000000000000000000000000000000000000000001000000
.......................................ACATGGCTAGATCGACTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000000000000000000000000000000000000000000000000000000000000
........................................................................................TTTATGGGGTCGGAGATGCTTC......................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000100000000000000000000000
..................................................................................ATATACTTTATGGGGTCGGAGATGC.........................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
.................................................................................................TCGGAGATGCTTCCTTCTGCATGTTC.........................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................TTATGGGGTCGGAGATGCTTCCTTCT.................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
droGri2
CATAC----AG----ACGGACAGACGGACGGACAGACGGACATTGCTATAGCGCCTTGGC---TGACCCTAATCAAGAATATATATACTTTATGGGGTCGGAGATGCTTCCTTCAGCCTGTTACATACATTTG-------TACAAAACCATTATACCCTTTTTACCCATTT-------TTAATGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CATAC----GGACAGACGGTCAGACGGACGGACAGACGGACATGGCTAGATCGACTCGGTTGTTGATCCTGATCAAGAATATATATACTTTGTGGGGTCGCAGATGCTTCCTTCTGCCTGTTACATACATTTT-------GGCGACTCTAATATACCATTTCACCCTA-------TGGGTGTATGGTATAAAAACA----------------------------------------------------------------------------------------------GAT----CTCATTT-------------------------------------------------------ACTTCTGCTG-CT---------------------------------------------G-----------------------------------------------------------------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................GGACAGACGGACATGGCTAGATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300030
........................................................................................TTTGTGGGGTCGCAGATGC.........................................................................................................................................................................................................................................................................................................................................................................................19200.10200101
.........GGACAGACGGTCAGACGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.08100100
..........GACAGACGGTCAGACGGACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.08100001
.....................................................................................TACTTTGTGGGGTCGCAGATGCTTC......................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.................................................................ATCCTGATCAAGAATATATATACTTTG........................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.......................................................................................CTTTGTGGGGTCGCAGATGCT........................................................................................................................................................................................................................................................................................................................................................................................21200.05110000
..........................................................................................TGTGGGGTCGCAGATGCTTCC.....................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.................................................................................TATATACTTTGTGGGGTCGCAGATG..........................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.................................................................................TATATACTTTGTGGGGTCGCAGATGCT........................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
.....................................................................................TACTTTGTGGGGTCGCAGATGCTTCC.....................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
........................................................................................TTTGTGGGGTCGCAGATGCTT.......................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
................................................................................................................................................................TCACCCTA-------TGGGTGTATGGTA........................................................................................................................................................................................................................................................................................................21200.05101000
......................................................................................ACTTTGTGGGGTCGCAGATGC.........................................................................................................................................................................................................................................................................................................................................................................................21200.05110000
.....................................GGACATGGCTAGATCGACTCGGTTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100100
dp5
-----------ACGGACAGACGGACGGACGGACAGACAGACATGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATACACTTTTACCACAAATCTAATATACCCCAATACTC-ATTT----TGAGTGTCGGGTACAAAAATC---------------TCTTCAAAATACACTAGG---------------------C-----------------------------------------------------------TAGGAAATCTTTT-------------------------------------------CCG-CAGGCCATGGC---------------ACGGGC---------------AACACC------AC-CGCCAAC-----------------------A---CC---------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................TCGGAAACGATTCCTTCTGGACG............................................................................................................................................................................................................................................................................................................................................................................2320116.4023280232800000000
..................................................................................................CGGAAACGATTCCTTCTGGAC.............................................................................................................................................................................................................................................................................................................................................................................21203.707407400000000
..........................GACGGACAGACAGACATGGCTCAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................25203.707400000000740
...........ACGGACAGACGGACGGACGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................22203.406800000000680
........................................................................................................................................TTACCACAAATCTAATATACCCC.....................................................................................................................................................................................................................................................................................................................................23202.304600460000000
..................................................................................................................................................................................................................................................................................................................................T-------------------------------------------CCG-CAGGCCATGGC---------------ACGGGC---------------AACA...............................................................2511.0010100000000
...............................................................................................................................................................................TGAGTGTCGGGTACAAAAATC---------------TCTT.............................................................................................................................................................................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................TTCAAAATACACTAGG---------------------C-----------------------------------------------------------TAGGAAATC.....................................................................................................................................................................2611.0010000001000
................................CAGACAGACATGGCTCAATCGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.901801800000000
............................................................................................TGGGGTCGGAAACGATTCCTTCTGGACGT...........................................................................................................................................................................................................................................................................................................................................................................29200.851700170000000
.................................................................ATGCTGATCAAGAATATATATACTT..........................................................................................................................................................................................................................................................................................................................................................................................................25200.701401000000400
........................................................................TCAAGAATATATATACTTTATGGGGT..................................................................................................................................................................................................................................................................................................................................................................................................26200.601200120000000
..................................................TCGACTCGGCTATTGATGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................20200.551101100000000
..................................................................................................................................................................ACTC-ATTT----TGAGTGTCGGGTACAAA....................................................................................................................................................................................................................................................................................................2520.5010100000000
...........................ACGGACAGACAGACATGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.4590900000000
....................CGGACGGACGGACAGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.4080000000080
..........................................................................................TATGGGGTCGGAAACGATTCCTTCTGG...............................................................................................................................................................................................................................................................................................................................................................................27200.3060600000000
..........................................TGGCTCAATCGACTCGGCTATT....................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060600000000
..............................................................................ATATATATACTTTATGGGGTC.................................................................................................................................................................................................................................................................................................................................................................................................21200.2550010004000
..........................GACGGACAGACAGACATGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000005
.............GGACAGACGGACGGACGGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000040
.......................................................................................................................................TTTACCACAAATCTAATATACCCCAATA.................................................................................................................................................................................................................................................................................................................................28200.2040000000400
............................................................................................................TCCTTCTGGACGTTACACACATAC................................................................................................................................................................................................................................................................................................................................................................24200.2040200000200
................CAGACGGACGGACGGACAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040400000000
..........................................................................................TATGGGGTCGGAAACGATTCCTTCTGGA..............................................................................................................................................................................................................................................................................................................................................................................28200.2040400000000
..................................................................................................CGGAAACGATTCCTTCTGGACGT...........................................................................................................................................................................................................................................................................................................................................................................23200.2040040000000
...............................................................TGATGCTGATCAAGAATATAT................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000004000
............................................................................................................TCCTTCTGGACGTTACACACATACACT.............................................................................................................................................................................................................................................................................................................................................................27200.2040400000000
....................CGGACGGACGGACAGACAGACATGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2040000000301
........................CGGACGGACAGACAGACATGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000030
...........................ACGGACAGACAGACATGGCTCAATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530000000030
........................CGGACGGACAGACAGACATGGCTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000030
..................GACGGACGGACGGACAGACAGACAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000001200
................................CAGACAGACATGGCTCAATCGACTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000030
................................CAGACAGACATGGCTCAATCGACTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530300000000
............CGGACAGACGGACGGACGGACAGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000003
........................CGGACGGACAGACAGACATGGCTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000030
.......................................................................ATCAAGAATATATATACTTTATGGGG...................................................................................................................................................................................................................................................................................................................................................................................................26200.1530300000000
..................................GACAGACATGGCTCAATCGACTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530300000000
............................................................................................................TCCTTCTGGACGTTACACACATA.................................................................................................................................................................................................................................................................................................................................................................23200.1530000000300
.............GGACAGACGGACGGACGGACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
...........ACGGACAGACGGACGGACGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000002
..............................................................................................................CTTCTGGACGTTACACACATAC................................................................................................................................................................................................................................................................................................................................................................22200.1020000000002
.................................................................................................................................TACACTTTTACCACAAATCTAATA...........................................................................................................................................................................................................................................................................................................................................24200.1020200000000
..............................GACAGACAGACATGGCTCAATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
..........................................TGGCTCAATCGACTCGGCTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000002000
................CAGACGGACGGACGGACAGACAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000200
..................................................................................................CGGAAACGATTCCTTCTGGACGTTACA.......................................................................................................................................................................................................................................................................................................................................................................27200.1020000000020
.................................AGACAGACATGGCTCAATCGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
...............ACAGACGGACGGACGGACAGACAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000200
................................................................................................................TCTGGACGTTACACACATACACTT............................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
.............................................................................................................................................ACAAATCTAATATACCCCAATAC................................................................................................................................................................................................................................................................................................................................23200.1020020000000
.................................................................................................................................................................TACTC-ATTT----TGAGTGTCGGG..........................................................................................................................................................................................................................................................................................................20120.0810100000000
..................................................................................................................................................................ACTC-ATTT----TGAGTGTCGGGTA........................................................................................................................................................................................................................................................................................................21130.0810100000000
...........................................GGCTCAATCGACTCGGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.............................................................................................GGGGTCGGAAACGATTCCTTCT.................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...............................ACAGACAGACATGGCTCAATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
.......................................ACATGGCTCAATCGACTCGGCTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
....................................................................................................GAAACGATTCCTTCTGGACGT...........................................................................................................................................................................................................................................................................................................................................................................21200.0510001000000
........................................................................TCAAGAATATATATACTTTATGGGG...................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000010
.........................GGACGGACAGACAGACATGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
..........................GACGGACAGACAGACATGGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000001
............CGGACAGACGGACGGACGGACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
..................................................................................................................................................TCTAATATACCCCAATACTC-ATT..........................................................................................................................................................................................................................................................................................................................23200.0510100000000
........................................................................................................................................TTACCACAAATCTAATATACCCCA....................................................................................................................................................................................................................................................................................................................................24200.0510000000010
...................ACGGACGGACGGACAGACAGACATGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000010
..............................................................................ATATATATACTTTATGGGG...................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000010
...................................ACAGACATGGCTCAATCGACTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000010
.................AGACGGACGGACGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.................................................................................................TCGGAAACGATTCCTTCTG................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000100
...........................ACGGACAGACAGACATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000010000
........................................................................................................................................................ATACCCCAATACTC-ATTT----TGA..................................................................................................................................................................................................................................................................................................................21200.0510000000010
................CAGACGGACGGACGGACAGACAGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000100
...............................................................................TATATATACTTTATGGGG...................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000010
........................................CATGGCTCAATCGACTCGGCTATTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
..........................................TGGCTCAATCGACTCGGCTATTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000010
.................................AGACAGACATGGCTCAATCGACTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
.....................................AGACATGGCTCAATCGACTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000001
................................................................................................................TCTGGACGTTACACACATA.................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
....................................................................................................................................ACTTTTACCACAAATCTAATATACC.......................................................................................................................................................................................................................................................................................................................................25200.0510100000000
..............................................................................................................................................CAAATCTAATATACCCCAAT..................................................................................................................................................................................................................................................................................................................................20200.0510000000010
.....................GGACGGACGGACAGACAGACATGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
....................................................................................................................................ACTTTTACCACAAATCTAATA...........................................................................................................................................................................................................................................................................................................................................21200.0510000000010
................................................................................ATATATACTTTATGGGGTCGGA..............................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
......................................................................................................................................TTTTACCACAAATCTAATATACC.......................................................................................................................................................................................................................................................................................................................................23200.0510000000100
................................................................................................................TCTGGACGTTACACACATACA...............................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
.........................................................................................................GATTCCTTCTGGACGTTACACACATA.................................................................................................................................................................................................................................................................................................................................................................26200.0510010000000
............................................................................................................TCCTTCTGGACGTTACACACATACAC..............................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
.........................................................GGCTATTGATGCTGATCAAGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
..........................................................................................................................ACACACATACACTTTTACCA......................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................TACCCCAATACTC-ATTT----TGA..................................................................................................................................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................TACCACAAATCTAATATACCCCAATA.................................................................................................................................................................................................................................................................................................................................26200.0510010000000
.........................................................................................................................TACACACATACACTTTTACCACAAATC................................................................................................................................................................................................................................................................................................................................................27200.0510010000000
................................CAGACAGACATGGCTCAATCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000010
droPer2
---AC----AGACGGACGGACGGACGGACGGACAGACAGACATGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATACACTTTTACCACAAATCTAATATACCCCAATACTC-ATTT----TGAGTATCGGGTACAAAAATC---------------TCTTCAAAATACACTAGG---------------------C-----------------------------------------------------------TAGGAAATCTTTT-------------------------------------------CCG-CAGGCCATGGC---------------ACGGGC---------------AACACC------AC-CGCCAAC-----------------------A---CC---------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................TATCGGGTACAAAAATC---------------TCTTCAAAA........................................................................................................................................................................................................................................................................2611.001010000
..................................................................................................................................................................................................TC---------------TCTTCAAAATACACTAGG---------------------C-----------------------------------------------------------TAGGA.........................................................................................................................................................................2611.001010000
...................................................................................................................................................................CTC-ATTT----TGAGTATCGGGTACAAAAA..................................................................................................................................................................................................................................................................................................2650.201010000
...................................................................................................................................................................CTC-ATTT----TGAGTATCGGGTACAA.....................................................................................................................................................................................................................................................................................................2370.141010000
...................................................................................................................GGACGTTACACACATACACTT............................................................................................................................................................................................................................................................................................................................................................21200.051010000
.......................................................................................................................GTTACACACATACACTTT...........................................................................................................................................................................................................................................................................................................................................................18200.051010000
.....................GGACGGACGGACAGACAGACATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
droAna3
CGTAG----AAACGGACAGACGGACAGACGGACAGACGGACATGCTCATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTTTG-------ACCAAAATTATAATACCCTC------TG----CAA--------GGGTATAAAAACA------------------------------------TTCT--------------------------------------------T---------------------TTATTGACTTTGAATTT--TTTT-------------------------------------------------------------------------------------------------------------------GTC-----------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................CAGACGGACAGACGGACAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.204040000
...............................................................................................................................................AAAATTATAATACCCTC------TG----CAA--------G............................................................................................................................................................................................................................................................................................................23200.102002000
.........................................ATGCTCATATCGACTCAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000002
......................................GACATGCTCATATCGACTCAGGAGGTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................28200.102200000
..............................................................................................................CTTCACTGCGTTGCACACTT..................................................................................................................................................................................................................................................................................................................................................................20200.051010000
....................................CGGACATGCTCATATCGACTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
droBip1
CAGAC----AGACAGACGAACAGACAGACGGACAGACGGACATGCTCATATGAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCATCACTGCGTTGCACACTTTTG-------ACCAAAATTATAATACCCTC------TT----CAA--------GGGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CGTAG----AAACAGACAGACGGACAGACAGACAGACGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTTTCCTTCACTGCGTTGCAAACTTCTG-------ACTGAAATTATAATACCCT--------G----CAA--------GGGTATAAAAATT-----------------TTGTAATTAGACTTAGCTGCT-----------------------------------------------------------------------------------CCTTGT-------------------------------------------CCT-CGGTC---------------GTCGCTGCTGTCGTCACTGCCGCTGTAG-----------------------------T----------------TGTT---------------GSizeHit CountTotal NormTotal
No Reads
droFic1
CATAG----AAACAGACAGACGGACCGACGGACAGACGTACAGACGGATTTCGATTCAGATCGTGATGCTGATCAAGAATATATATACTTTATAGGGTCTAAGGTGCCTCCTTCACTCCGTTGCAAACTTTTG-------ACTGAAATTATAATACCATTTTGCTCTG----CAA--------GGGTATAAAAAGGCTTTAAATTTCATGTTC--------------AA-------------------------------------------------------TTAACGGAT----TAC---------------------TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CAGAC----GGACAGACGGACGGACAGACGGACAGACGGACATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTCTG-------ACTGAAATTATAATACCCTC------TG----CAA--------GGGTATAAAAATC-------------------------AAACT------TTCCTTTATTGAGTTGGATTAAGAACTAAC-TT------ACTTAGATT--------------------GAACAA-TTGT----------TTTTATAGCTAC---------------GC-----------------GTCG---------------CTCCATCGCTGCCGCCGTCTCTGCCGCTGTTG-----------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droRho1
GAAAC----AGACAGACGTACAGACAGACGGACAGACGGACATGGCTATAGCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTTTG-------AA--AAATCATCTTTTCTTT--------------------ATTGAGTT-----------------------------------------------------------GGATTAAGAACTAACTTT------AATTAAGCT--------------------AAACAA-TTATTCA---------TTATGACTAC---------------GC-----------------GTCG---------------TTCCATCGCTGCCGCCGTCTCTGCCGCTGTTGCTGCT------TC-TGCTAA----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTTAC----------------GGACAGACAGACATACGGACATGGCTAGATCTACTCGGCTAGTGATCCTGATCAACAATATATATACTTTATGGGGTCGGAAACGCTTACTTCTACCTGTTTC----------------GACTAATCTAGTATAGTGTTATATAGTAATT-------------------------------------------------------TAGTCGTTCCTTTTAAGTT-----------------------------------TTTATTTGGGGTTTT----A---------------------TTTT----------------------------------ATT---------------TGGT---------------TGGAGC---------------AGCAAT------GT-TGCCGTA-----------------------A---CG---------ATCGTTGSizeHit CountTotal NormTotal
No Reads
droTak1
---AC----AGACGGACAGACGGACAGACGGACAGACGGACATGGCTAGATAGACTCGGCTATTGGTGCTGATCAAGAATATATATACTTTATGTGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACATCTG-------ACTGAAATTATAATACCCTC------TA----CAA--------GGGTATAAAAAAA------------------------------------------------------------------------------------A------------TT-----GTTTAACGC----------------------------------------------------CTGTGCGA-GGA---------------CCAGCGCCGGCAACGCC---------------CG-------AG-TCCAAA-------GGG----------------CACCGGACATCTGCA-GCAGSizeHit CountTotal NormTotal
No Reads
droEug1
CATAC----------------GGACAGACGGACAGACGGGCATGGCTCATTCGTCTTCGCTATTCATCCTGATCAAGAATATATATACTTTATAGGGTCGGTAACGCTTCCTTCTACCTGTTACATACTTTTC-------AACGAATCTAGTATACCCTTTTATTCTA-------CGTGTAACGGGTATAATTTGT------------------------------------------------------------------------------------T------------TTATT-----------------CTTTTTTTTA--------GCAGCCGGCGTGTGCGTGTCTCGCCTCC----------------------------------TCC----------------------------------TGCCGCC-----------------------T---CC---------------GSizeHit CountTotal NormTotal
No Reads
dm3
CATAC----GG----ACAGACAGATAAACGGACAGACGGACATGGATAGATCGACTCGGCTCTTGATCCTGATCAAGAATATATTTACTTCGTATAGTCGGAATAG--TCTTTCTGCCTGTTACATACTTTTC-------AAAGAATCTAGTATACCCTTATACCCTT-------CGATTAACGGGTATAATTATA------------------------------------------------------------------------------------T------------AT-------------------------------------------------------------------------------------------------------------------------------------------------ATT-----------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droSim2
CATAT----------------GAACGGACAGAGAGACGGACACGGCCAGATCAACTGGGCTATTGATCCTGATCAA---------------ATGTGGTTGAAAACGCTTCCTTCTCCCTGTTACATGCTTCTT-------AACGAATCAAGTATACCCTTTTACTTC------TA--------GAAT-------TC---------------TCTT---------------------------------------------------------------------TTGTCTTAT----TT---------------------CTTCT-------------------------------------------G-T-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................TGGTTGAAAACGCTTCCTTC..................................................................................................................................................................................................................................................................................................................................................................................2021.00200002000000000000
...........................ACAGAGAGACGGACACGGCCAGATCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2621.00200000001010000000
............................CAGAGAGACGGACACGGCCAGATCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000001000000000
...................................ACGGACACGGCCAGATCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000001000000000
...........................ACAGAGAGACGGACACGGCCAGATCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000100000000
.............................................................ATTGATCCTGATCAA---------------AT.......................................................................................................................................................................................................................................................................................................................................................................................................1720.50100000000100000000
..................................GACGGACACGGCCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................1680.13100000010000000000
..........................................................GCTATTGATCCTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
CATAC------------------------GGACAGATGGACAGGGCTAGATCGACTCGGCTATTGATCCTAATCAACAATATATGTACATTATATAGTTGGAAACGCTTCCTTCTGCCTGTTATATACTTTTA--------ACGAATCCAGTATACCATATTATATTA-------CCATTATATATTATA-------------------------------------------------------------------------TTATATAT---------A------------TT-----ATATAT-ATTA-----TTTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................TCGACTCGGCTATTGATCCTAATCA.........................................................................................................................................................................................................................................................................................................................................................................................................................2560.3322000
..................................................TCGACTCGGCTATTGATCCTAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................2370.1410010
droYak3
CATACGGACAGACGGACAGACAGACAGACGGACAGACGGACATGGCCAGATCGACTCGACTATTGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACATACTTTTC-------AACGAATCTAGTATACCCTTTTACTCTA-------CGAGTAACGGGTATAATTATAACTGAAGTT------------------------------------------------------------------------GCT--------------------TTACAT-GTTTTGGTGGTATTT------------------------------------------------------ATGCCACCAGCTCCGTCGCTGCCTCTG-------------------------------CTCA-CGTCGGAGCTGTTGGTTGCCGTCAG--CG---------CT-CCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................CGCTTCCTTCTGCCTGTTACATACTT..................................................................................................................................................................................................................................................................................................................................................................26200.20404000000000
...........................ACGGACAGACGGACATGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10202000000000
........................................................CGACTATTGATCCTGATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010000000
....................................................................................................................................C-------AACGAATCTAGTATACCCTTTTACTC..............................................................................................................................................................................................................................................................................................................................27200.05101000000000
droEre2
CATAC----GGACGGACAGACAGACGAACGGACAAACAGACATGACCAGATCGAATCGGCTATTGATCCTGATCAAGAATATGTATACTTTATACGGTCGGAAACGCTTTCTTCTCCCTGTTACATACTCTTC-------AACGCATCTAGTATACCCTTTTACTCTA-------CGAGTAACGGGTATTATAAAT------------------------------------------------------------------------------------A------------TT-----ATTTATTATTG-----TTTCTTTTT--------G----------------------------TATCCCG-CTGACCGT----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..TAC----GGACGGACAGACAGACGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.1710000100
.......................................................TCGGCTATTGATCCTGATCAAGAATA...................................................................................................................................................................................................................................................................................................................................................................................................................26200.1533000000
....................................................................................................................................................TAGTATACCCTTTTACTCTA-------CGAGT................................................................................................................................................................................................................................................................................................................25200.0510000001

Generated: 05/17/2015 at 10:27 PM