ID:

dmo_491

 Coordinate:

scaffold_6328:1374384-1374534 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.3 -8.2 -8.1 -8.0

Flybase annnotation

CDS [Dmoj\GI16351-cds]; exon [dmoj_GLEANR_17073:12]; intron [Dmoj\GI16351-in]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGCCTCGCTGAGCGTTGATCTGCCCAAGGAGGAGGAGCAGCAGATGCAGGTGCATCTGCACCATGGGCAGTCGCAGCAACAACAACGCCAGCAACACCAGCGGCAACAGCAACAGCAACACTTGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGGATGAGCAAATGCCCCAGCAGGATGAACAGATGTTAACACAGCATCTGGATGATGAATTGCCGGCCCTGGTGCCGCTCAGTCAACTTCAA
*********************************************************************************************..............................(((....((.((....)).))......................)))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V041
embryo
 V049
head
.............................................................................................AACACCAGCGGCAACAGCAACA........................................................................................................................................ 22 0 1 2.00 2 0 2 0 0 0
.......GCTGAGCGTTGATCTGCCCAA............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................................GATGCAGGTGCATCTGCACCATGGGC...................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................ACAACAACAACAACAGGATGAGCA.................................................................................. 24 0 1 1.00 1 0 0 0 1 0
.................................................................................................................................................................GATGAGCAAATGCCCCAGCA...................................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................CAAGGAGGAGGAGCAGCAGATG............................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................GAGCAAATGCCCCAGCACGATGAACAGA........................................................... 28 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................AATTGCCGGCCCTGGTGCCGCTCA........... 24 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................AACACAGCATCTGGATGAT.................................... 19 0 1 1.00 1 0 1 0 0 0
..............GTTGATCTGCCCAAGGAGGAGGAGCAGC................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
...............................................CAGGTGCATCTGCACCATGGGCA..................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................................................................CAACGCCAGCAACACCAGCGGCA................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0
.......GCTGAGCGTTGATCTGCCCAAG.............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1
.................................................................................................................................................................................................GTTAACACAGCATCTGGATGATGA.................................. 24 0 1 1.00 1 1 0 0 0 0
................TGATCTGCCCAAGGAGGAGG....................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...............................................CAGGTGCATCTGCACCATGGGCAGTCGC................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0
.........................CAAGGAGGAGGAGCAGCAGAT............................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................GCAACAACAACAACAACAGGATGAGC................................................................................... 26 0 1 1.00 1 0 1 0 0 0
........................................................................CGCAGCAACAACAACGCCA................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................AACAGATGCTAATACCGCAT............................................. 20 3 5 0.60 3 3 0 0 0 0
..........................................................................................................................TTGCATCAGCAGCAGCAGCAGCAAC........................................................................................................ 25 1 17 0.06 1 0 0 1 0 0
...........................................................................................................................................................................................ACAGATGCTAATACCGCAT............................................. 19 3 20 0.05 1 1 0 0 0 0
...........................................................................................................................TGCAGCAGCAGCAGCAGCAG............................................................................................................ 20 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................GCAGCAGCAACAACAACA................................................................................................. 18 0 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

ACCGGAGCGACTCGCAACTAGACGGGTTCCTCCTCCTCGTCGTCTACGTCCACGTAGACGTGGTACCCGTCAGCGTCGTTGTTGTTGCGGTCGTTGTGGTCGCCGTTGTCGTTGTCGTTGTGAACGTCGTCGTCGTCGTCGTCGTTGTTGTTGTTGTTGTCCTACTCGTTTACGGGGTCGTCCTACTTGTCTACAATTGTGTCGTAGACCTACTACTTAACGGCCGGGACCACGGCGAGTCAGTTGAAGTT
**********************************************************************************..............................(((....((.((....)).))......................)))********************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M046
female body
 V041
embryo
....................................................................................................................................................................................................................................ACCACGGGAAGGCAGTTGAA... 20 3 5 0.20 1 0 1 0
...............................CCTCAGCGTCATCTACGTCCAC...................................................................................................................................................................................................... 22 3 5 0.20 1 1 0 0
............................................................................................................TCGTTGTGGTAGTGAACGCCG.......................................................................................................................... 21 3 17 0.06 1 1 0 0
..CGGAGAGACTCGCTATTAG...................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6328:1374334-1374584 + dmo_491 TGGCCTCGCTGA-----------------------GCGTTGATCTGCC----CAAGGAGGAGGAGC-AGCAGATGCA------------GGTG-------------------CATC----------------TGCACCA---T---------------------------------------------GGGCAG---------------TC---------------GCAGCA---AC---AACAACGCCAG----------CAACA---------CCAGCGG---------------CAACAGCA---ACA---------GCAACACTTGCAGCAGCAG------------------------------------------CAGCAGCA---------------------------------------------------G---------------------CA------ACAACAACAACAACAGGATGAGCAAATGC---------------------CCCA---GCAGGATGAACA------------------GATGTTAACA------CAG--------------------------------------------CATCTGGATG-------------------A-----------TG-----------------------------------AATT--------GCCGGCC--------------------------------------CTGGTGCCGCT-------CAGTCAACTTCAA--
droVir3 scaffold_12928:4191779-4192053 + TGGCCTCGCTGA-----------------------GCGTTGATTTGCC----CAAAGAGGAGGAGC-AGCAACAGCA-------------------------------------G-CAACAACAGCAACAAC---------------------------------------------AGCAA---------------CAACAACAGC------A------------GCAGCA---GC---AGCAA----------------------------------------------------------------------------------CCACAACAAC------------------------------------------AACAACCACCACCACCACAACAACAGCAGCAGCAGCAGCCGTTGCCACAGC---------------------------------------A---------------GGATGAGCAAATGCCAACACAGCCGCAACAACAACCACAACAACAGGATGAGCC------------------AATGTCAACG------CAA--------------------------------------------CAGCAAGAGG-------------------A-----------------------------------------------------------------------------------------TAGCCTGTTGCCGCCACTAGCGCCTCT-------TAGTCAATTCCAT--
droGri2 scaffold_2234:116-336 + AGCA--------GCA-------G-----C----A------------------------------AC-AGCAGCAGCA--------------------------------------------------------------GCAGC------------A---------ACAGCA---GC------------------------------------------------AACAGCA---G---CAACAGCAGCAG----------CAGCA---------ACAGCAG---------------CAACAGCAGCAACAGCAACAACAGCAACAACA---GCAACAGC---------------------------------------AACAGCAG---------------------------------------------------------------------------CAG---CAGAAGC---------------------------------------------AACA---------------ACAAC------------------AGCAGCTGCAACAGC------------AACAAATTGAGAAACAACAA-----CAG------------------TC--------------------------A----------------------------------GCCAATTTGGTT------------------GTTTC--CA------------------TTGCCACCGTAGCG-----CCGCAACTGCAA--
droWil2 scf2_1100000004909:8722810-8723043 + CTGT--------------------ATCAGCAGCA------GA----------------------------TACAT------------CAGCTG--------------------------------------------CAACAGCAACAACAGCAGCAGCAGATGCAACAGCAGATGCAACAG---------------CAA------CAACAGCAGCAGCAGCAG------------C---AGATGCAACAA----------CAGCA------------------------------------------ACAGCAGCAGATGCAACAACAGCAACAGCAG------------------------CAGCAAC---------AACAGCAGAT---------------------------------------------------GC---AAGA------GCAGCAAGAACGCCA---------------------------------------------ACAGCAACA---------------TCAGC------------------TGCAACATCAGCTGCAA------------CA------TC--------------AGCTGCAA---CATC----------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAA--
dp5 3:11444765-11444982 - CTCCA-------GCA-------G-----C----A------------------------------AC-ATCATCATCA-------------------------------------GC----------------AG------CAGC------------ATCAG------------GCGC------------------------------------------------AGCAGCA---G---GCACA-------GCAACAGCAGCAGCA---------ACAGCAGGCTCAGCAGCAGGCTCAGCAACAGCAACAACAACA---------------GCAGCAACAACAGCAACAACAACAGCAACAACAGCAGC---------AACAGCAGCA---------------------------------------------------GC---------------------------A---------------------------------------------GCAGCAGCA---------------ACAAC------------------AACAGCAGCAACAG-----------------------------------------------------AAG---------------------------CT----------------------------------------------------A---AAGCAGG-----------------------------------------------CTCAG-GCGTCGTCAGT
droPer2 scaffold_33:723653-723869 + AGCA--------GCA-------G-----C----A------------------------------GC-AGCAACAGCA-------------------------------------G----------------------CAGCAGC------------A---------ACAGCA---GC------------------------------------------------AGCAGCA---G---CAACA-------GAAGCAGCAGCAGCA---------ACAGCAGCAACAGCAGCAG---TAA---------CAGCAGCAGCAGCAACAGCA---GCAGCAGC---------------------------------------AACAGCAG---------------------------------------------------------------------------CAG---CAACAGC---------------------------------------------AACA---------------GAAGC------------------AGCAGCAGCAGCAGC------------AACA------GCAACAGCAA-----CAGCAGCAG---CAGCAG------------------CTG--A-----GG-----------------------------------AAGAGC--------CTGAT--------------------------------------------C--------GG-GGG----GCCCAA--
droAna3 scaffold_13266:5949895-5950129 + TGGC--------------------GCCAC----CGCCGCAGTTCTGCGATTGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CACAGCCGCATCTGCCAACTAGCCAACAG------------TAT------CATACACA------------GCAGCAACAACAGCAACAGCAGCAG----------CAGCA---------TCA------------------------------------GCAG------CAGCAGCAACAGCAA------------------------CAGCAGC---------AACAACAACA---------------------------------------------------GC---------------------------A---------------------------------------------GCTGCAACA---------------GCAAC------------------TGCAACAACAACAGATG------------TT------GC--------------AGATGCAC---CAGCGGCTGTCCG----------GTGG--TGCTGG--C--C----------------------------------------------------------------------------------------CCGGGG------------------------C--
droBip1 scf7180000393900:39013-39262 + CCGCCT--------------------CAAA---A------------------------------A-------AGGCA------------GCTGCCGTCGCCGGTGGT-------------------------------------GGTCT--------------------------------G---------------AAT------CCTCTCCAGCAGCA------GCAGCAACAACAGCAACAGCAGCAG----------CAACA---------ACA------------------------------------------GCAGCAACAACAACAGCAA------------------------CAGCAGC---------AACAACAGCA---------------------------------------------------GC---------------------------A---------------------------------------------ACAACAACA---------------ACAAC------------------AGCAGCAACAACAGCTAGCCGGAGGGGTACAAATGGGAG-------------------------------TACAT----------TCGGGACCCGGTGG--CATGCTGGACGGTTCACCGCAAA-------------TCC-----------A---TAGTATG-----------------------------------------------CCCAG-TCCCTATGA--
droKik1 scf7180000302385:76356-76623 - TGGC--------------------GCCAC----CGCCGCAGTTCTGCGATTGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CGCAGCCGCATCTGCCAACGAGCCAA---------------TAC------CATCCCCAGCAGCAGCAGCAGCAGCA---A---CAACAGCAGCAG----------CAGCA---------ACA------------------------------------------GCAGCAACTGCAGCAGCAT------------------------CAGCAGC---------TACAGCAGCA---------------------------------------------------GC---AACA------GCTGCAGCAG---CAACTGC---------------------------------------------AACA---------------GCAGC---------------------AGCAGCAGCAGATG---------CAACT------GC--------------AGATGCAC---CAACGGCTGTCGG----------GTGG--CGCCGG--T--C----------------------------------------------------------------------------------------CCGGCTC--------GG-TGGGCACCTTGGG--
droFic1 scf7180000454040:162710-162931 - AGCA--------GCA-------A-----C----A------------------------------GG-AGCATAATCA------------GCAA-----------------------------------CAACAGCATC------------------AA------------------------------CAGCAA------------C------A------------GCATCA---AC---AGCAA-------------------CAACAGCAGCATCAACAG---------CAA---CAACAGCATCAACAGCAACAACAGCAACAACA---------------------------------------------------------GCA---------------------------------------------------A---------------------CA------ACAGCATCAACA---------------------------------ACAACAACA---------------ACAACACC------ACC------AGCAACAGCAACAG--------------------------------------------------------CAATCAAAACGTTGTGATCA---------AG-----------------------------------AGAA--------TCAGG---GG-----------------------------------CAGGCGGAGTT-----G-GGTAAACATCCAA--
droEle1 scf7180000491201:5431-5680 - TGGC--------------------ACCAC----CGCCGCAGTTCTGCGATTGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CGCAGCCGCATCTCCCAACGAACCAA---------------TAT------CATCCACAGCAGCAACAG------------C---AACAGCAGCAA----------CAGCA---------ACA---------------------------------CCAGCAACTGCAGCAACAGCAGCAGCAA------------------------CAGCAGC---------AGCAGCAA------------------------------------------------------C---------------------------A---------------------------------------------ACTGCAACA---------------GCAAC------------------TGCAGCAGCAACAGATG------------CT------GC--------------AGATGCAC---CAGCGGCTGTCCG----------GCGG--TGCTGG--C--G----------------------------------------------------------------------------------------CTGGAGC--------TG-TGGGCACCTTGGG--
droRho1 scf7180000777200:277356-277599 - TGGC--------------------GCCAC----CGCCGCAGTTCTGCGATTGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CGCAGCCGCATCTGCCAACGAGCCAA---------------TAT------CATCCACAGCAGCAACAG------------C---AACAGCAGCAG----------CAGCA---------ACA---------------------------------GCAGCAGCAGCAGCAACTGCAGCAGC------------------------------------------AACAGCAGCA---------------------------------------------------AC---------------------------A---------------------------------------------ACTGCAACA---------------GCAAC------------------TGCAGCAGCAACAGATG------------CT------GC--------------AGATGCAC---CAGCGGCTGTCCG----------GCGG--TGCTGG--C--G----------------------------------------------------------------------------------------CTGGAGC--------TG-TGGGCACCTTGGG--
droBia1 scf7180000302428:2916928-2917160 - TGATCT--------------------CAGCAATG-----------------------AGA----------ATG-----GACTAT---CAAATGCCACCGCCAGCACTGGCGC--------------------------------------------TACAG------------------------------------------------------CAGC------AGCAGCA---A---CAGCAGCAGCAG----------CAGCA---------TGGCCTG---------------CAACACCA---GCA---------GCAGCAATTGCAATTGCTG------------------------------CAGAATGTGCAACAGCAGCA---------------------------------------------------GC---------------------------A---------------------------------------------GCAGCAGCA---------------GCAAC------------------ACCAGCAGCAACAGTTG------------CT--------------------------------------------GG----------GCAACATGTCGC--A--G---A---------------CG-----------------------GCGGCC--------------------------------------TTGCCACCGCTGAGCAGCCT-GCCACTGCAA--
droTak1 scf7180000415377:45161-45365 + AGCA--------ACA-------G-----C----A------------------------------AC-AGCAGCA--------------------------------------------------------------------------------------GCAGCAACATCTCATGGAGCAG---------------CAA------CACCTGCAACAGCAACAA------------C---AACAGCAGCAG----------CAGCA---------GCG---------------------------------ATTGCAGACGCAACAACAGCAGCAGCAA------------------------CACCAGC---------AATATCA---------------------------------------------------------------------------------------CT---------------ATGCAATGC------------------CCCACCA---------------GCAACAGCAGCAGCAAC------AGCAGCAACATCAGA----------------------GA-----------------------------------------GTTGTTAGCG-------------------------------------------------------------------------------------------------------ATTTTGC------------CGAGAGTTTCAA--
droEug1 scf7180000409095:151841-152063 + GAA-------------------GTACCA-----------------GCAATTGC-----------------AATAT------------CAAATG--------------------------------------------CAGCAGCAATAT---------------------------------------GAATACCAGC---------------A------------GCAGCA---G---CACTAC---CAA----------CAGCA---------GTTCCAG---------------CAGCAGCA---ACA---------GCAGCAGCAGCAGCAGCAG------------------------------C---------AAAAGCAG---------------------------------------------------------------------------CA------GCAGCAGCAACA---------------------------------GCAGCAACA---------------GC---------AACATCTGA--------CACCTACGGC------------AACA------------CTTGTCCACCAG---CAGCAACATGA------------------------------GG-----------------------------------AACAAA--------TCGACT----------TGCTGTCCACTCAAC--------------------------------------CAACT--
dm3 chr2L:4881509-4881730 - GCCCGA------GG-------------------A------------------------------GC-AGCACCATCA-----------------------------------------------------------------------------------GCAGCAACTGCAGGCGGAGCACCACCATCAGCAA------------------CA------------GCACCA---AC---AACAA-------------------CAACAGCAGCAGCAGCAG---------------------------------CA---GCAGGAACTGCTGGAGCAG------------------------CAGCAGCGTG------AAATGCAG---------------------------------------------------------------------------GA------GCAGGCGCAACA---------------------------------GCAGCAGGT---------------GC---------ACCATC------ACCAGCAGGATCAGG----------------------AT-------------------------------CTCGC----------CGGCGACCAGGTGG--C--GCTGAAGGTGCCAC---------------------------------------------------------------------------------------------CACTCACCGTCAA--
droSim2 x:8608337-8608575 + CCCA--------------------------------------------------AGAAGCTG-----GGGATG-----ACCCAG---CAGCTGCAACAG-------------CAAC----------------AG------CAGC------------AGCAG------------GTGC------------------------------------------------AACAGCA---A---CAACATCAGCAC----------CAGCA---------CCAGGTG---------------CAACAGCA---ACAGCAGCATCAGCAGCAACAGCAGCAGCAGC---------------------------------------AACAACAA---------------------------------------------------------------------------CAA---CAGGTGCAGCACCAACAGCAGCAGCAAA------------------------------------------------------------------AGCTTCAGTTGCAGC------------AACA------------ACAG-----CAG---CATCAACACAA---------------------------CTC--G----------------------------------AACAATTTGATT------------------GTCGG-CCATCGGGG-------------------------------------CAGCTC--
droSec2 scaffold_11:1469955-1470191 - CCGA--------GCG-------G-----G----A------------------------------CC-AGCAGAAGCTG---CTCCACCAATAT--------------------------------------------CCACAGCAATAC------------------------------------------------------------AGTC------------AGCAGCA---G---CAACAGCAGCAG----------CTGTA---------TCAGCAG------------------------------------------CAACAGCAGCAGCAT------------------------CAGCAGC---------AACAGCAGCA---------------------------------------------------GC---ATCA------GCAACCGCAG---CAACCGCAGCACCA---------------------------------GCAGCCGCA---------------GC------------AAC------ATCAGCCGCAGCATC------------ATCA------------AGAG-----CTG---CAGCAACATGT---------------------------TCC--C--TATAAA---------------------------ACT--------GCTGGCCTAGACAA-----------------------------------------------CTCAG-TCTCCTCCA--
droYak3 3R:9344310-9344569 - TGGCCATGCAGA-------------CCAC----CAGCATGCAGCAGCC----CATG------GAGC-AGTCGCTTCA-------------------------------------G-GACAACCACAATCTCT---ACCA---G------------------------------------------------------CAGCAGGAGC------A------------GCAGCA---A---CAGCATCCGCAG----------CAGCA---------GCAAGAG---------------CCACACCA---GCA---------GCAACAATCCCAGCAGGAG------------------------------C------------------------------------------------AGACGTCGCAGCAGGAACAACAGCAGCAGCAGCAGCAG------C------------------------------------------------------------A---GCAGCATCAACA------------------GTTGTTGCTG------CCG--------------------------------------------CAG---CAGGCA---------------------------CT------------------------------------------------------------------------------CAATCAAGCGGAATCCCTGCCGGCGGT-------GGGTCAGCAGCAG--
droEre2 scaffold_4845:11181616-11181860 - CTGA--------GCGCTGCGCAG---------GA------GT------------------A---CC-AACAGCATCAG---CA------GCAC-------------------CAGC----------------AACACCA---G---------------CA------------------------------GCAC---------------CAACA------------GCATCA---A---CAACAT---CAG----------CAACA---------TCAGCAG---------------CATCAGCA---ACA---------GCAGCATCAACAGCATCAGC---------AA------------CATCAGC---------AGCATCAGCA---------------------------------------------------GC---------------------------ACCAGCAACATCA---------------------------------ACAGCACCA---------------AC------------AAC------ATCAGCAGCATCAG--------------------------------------------CAG---CA---------GGGAG-------G------------------------------------CGGTGGGCCTGT-CTC--------CCAGC---AGCAAATGGTGCCGG-TCAGTGTCG----------------------------------CAGCTG--C--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGGCCTCGCTGA-----------------------GCGTTGATCTGCC----CAAGGAGGAGGAGC-AGCAGATGCA------------GGTG-------------------CATC----------------TGCACCA---T---------------------------------------------GGGCAG---------------TC---------------GCAGCA---AC---AACAACGCCAG----------CAACA---------CCAGCGG---------------CAACAGCA---ACA---------GCAACACTTGCAGCAGCAG------------------------------------------CAGCAGCA---------------------------------------------------G---------------------CA------ACAACAACAACAACAGGATGAGCAAATGC---------------------CCCA---GCAGGATGAACA------------------GATGTTAACA------CAG--------------------------------------------CATCTGGATG-------------------A-----------TG-----------------------------------AATT--------GCCGGCC--------------------------------------CTGGTGCCGCT-------CAGTCAACTTCAA--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................AACA---------CCAGCGG---------------CAACAGCA---ACA---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
.......GCTGA-----------------------GCGTTGATCTGCC----CAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................GATGCA------------GGTG-------------------CATC----------------TGCACCA---T---------------------------------------------GGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAGGATGAGCA......................................................................................................................................................................................................................................................................................................2411.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGCAAATGC---------------------CCCA---GCA..................................................................................................................................................................................................................................................................2011.001100000
....................................................CAAGGAGGAGGAGC-AGCAGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATT--------GCCGGCC--------------------------------------CTGGTGCCGCT-------CA.............2411.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------CAG--------------------------------------------CATCTGGATG-------------------A-----------T..............................................................................................................................1911.001000001
.....................................GTTGATCTGCC----CAAGGAGGAGGAGC-AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
...........................................................................CA------------GGTG-------------------CATC----------------TGCACCA---T---------------------------------------------GGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................CAACGCCAG----------CAACA---------CCAGCGG---------------CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.......GCTGA-----------------------GCGTTGATCTGCC----CAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAACA------CAG--------------------------------------------CATCTGGATG-------------------A-----------TG-----------------------------------A.........................................................................................2411.001100000
.......................................TGATCTGCC----CAAGGAGGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................CA------------GGTG-------------------CATC----------------TGCACCA---T---------------------------------------------GGGCAG---------------TC---------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
....................................................CAAGGAGGAGGAGC-AGCAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------CA------ACAACAACAACAACAGGATGAGC.......................................................................................................................................................................................................................................................................................................2611.001000001
..................................................................................................................................................................................................................C---------------GCAGCA---AC---AACAACGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAG------------------------------------------CAGCAGCA---------------------------------------------------G---------------------......................................................................................................................................................................................................................................................................................................................................20200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................GCAGCA---------------------------------------------------G---------------------CA------ACAACAACA.....................................................................................................................................................................................................................................................................................................................18200.051000010
droVir3
TGGCCTCGCTGA-----------------------GCGTTGATTTGCC----CAAAGAGGAGGAGC-AGCAACAGCA-------------------------------------G-CAACAACAGCAACAAC---------------------------------------------AGCAA---------------CAACAACAGC------A------------GCAGCA---GC---AGCAA----------------------------------------------------------------------------------CCACAACAAC------------------------------------------AACAACCACCACCACCACAACAACAGCAGCAGCAGCAGCCGTTGCCACAGC---------------------------------------A---------------GGATGAGCAAATGCCAACACAGCCGCAACAACAACCACAACAACAGGATGAGCC------------------AATGTCAACG------CAA--------------------------------------------CAGCAAGAGG-------------------A-----------------------------------------------------------------------------------------TAGCCTGTTGCCGCCACTAGCGCCTCT-------TAGTCAATTCCAT--SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................GATTTGCC----CAAAGAGGAGGAGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000010000000000000000000001000000000000000000000000000000000
........................................GATTTGCC----CAAAGAGGAGGAGC-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000100000000000000000100000000000000000000000000000000000
....................................CGTTGATTTGCC----CAAAGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGGATGAGCC------------------AATGT..................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCACAGC---------------------------------------A---------------GGATGAGCAA.....................................................................................................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACAGC---------------------------------------A---------------GGATGAGCAAATGCCA...............................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
........................................GATTTGCC----CAAAGAGGAGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAACAACAGGATGAGCC------------------AA.....................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.....................................GTTGATTTGCC----CAAAGAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGCAAATGCCAACACAGCCGC.....................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAGG-------------------A-----------------------------------------------------------------------------------------TAGCCTGTTG.......................................1911.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACAGC---------------------------------------A---------------GGATGAGCAAAG...................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CAACAACAGC------A------------GCAGCA---GC---AGCAA----------------------------------------------------------------------------------CCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000001000000000000000000000000000000000
...........................................TTGCC----CAAAGAGGAGGAGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------A-----------------------------------------------------------------------------------------TAGCCTGTTGCCGCCACTAGCGCCT........................2711.001000100000000000000000000000000000000000000000000000000000000000
TGGCCTCGCTGA-----------------------GCGTTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAGG-------------------A-----------------------------------------------------------------------------------------TAGCCTGTTGCCGCCACT...............................2711.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGATGAGCC------------------AATGTCAACG------C......................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAACAACAGGATGAGC..........................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC------------------AATGTCAACG------CAA--------------------------------------------C.......................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAGG-------------------A-----------------------------------------------------------------------------------------TAGCCTGTTGCC.....................................2111.001000000000000000000000000001000000000000000000000000000000000000
..........................................TTTGCC----CAAAGAGGAGGAGC-AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGC---------------------------------------A---------------GGATGAGCAAATGC.................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGATGAGCC------------------AATGTCAACG------C......................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..........GA-----------------------GCGTTGATTTGCC----CAAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................GTTGATTTGCC----CAAAGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.......................................TGATTTGCC----CAAAGAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGGATGAGCC------------------AATGTCA................................................................................................................................................................................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
.....................................................AAAGAGGAGGAGC-AGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000001000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCC------------------AATGTCAACG------CAA--------------------------------------------CAGCAAGAG...............................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACAACAACAGGATGAGCC------------------A......................................................................................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCACAGC---------------------------------------A---------------GGATGAGCAAA....................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACG------CAA--------------------------------------------CAGCAAGAGG-------------------...........................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCTCT-------TAGTCAATTCCA...2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................GTTGATTTGCC----CAAAGAGGAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAAATGCCAACACAGC........................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG------CAA--------------------------------------------CAGCAAGAGG-------------------A-----------------------------------------------------------------------------------------TA...............................................1911.001000000000000000000000000000000000000000000000000000000000001000
.....................................GTTGATTTGCC----CAAAGAGGAGGAGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
.............................................................GGAGC-AGCAACAGCA-------------------------------------G-CAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CAACCACCACCACCACAAC....................................................................................................................................................................................................................................................................................................................................................................................................1940.251001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CAGCA---GC---AGCAA----------------------------------------------------------------------------------CCACAACAAC------------------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................2380.131000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................CACAACAACAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................21170.122000000000000000000100000000000100000000000000000000000000000000
.........................................................................................................................................................................................................AACAGC------A------------GCAGCA---GC---AGCAA----------------------------------------------------------------------------------CC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.111000001000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AGCA---GC---AGCAA----------------------------------------------------------------------------------CCACAACAAC------------------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................2290.111001000000000000000000000000000000000000000000000000000000000000
.......................................................................ACAGCA-------------------------------------G-CAACAACAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000001000000000000000000000000000000000000000000100
..................................................................................................................................................................................GCAA---------------CAACAACAGC------A------------GCAGCA---GC---AGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102001000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................AGCAA---------------CAACAACAGC------A------------GCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102001000000000000001000000000000000000000000000000000000000000000
............................................................................A-------------------------------------G-CAACAACAGCAACAAC---------------------------------------------AGCAA---------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102000000000000000000000110000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCCGTTG.............................................................................................................................................................................................................................................................................................................................................................................20100.101000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AA---------------CAACAACAGC------A------------GCAGCA---GC---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102000000000000000001000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000000000000000000000000000000000002000
.......................................................................................................................................................................................................ACAACAGC------A------------GCAGCA---GC---AGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AAC------------------------------------------AACAACCACCACCAC..........................................................................................................................................................................................................................................................................................................................................................................................................18110.091001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GC---AGCAA----------------------------------------------------------------------------------CCACAACAAC------------------------------------------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................21120.081001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCCGTT..............................................................................................................................................................................................................................................................................................................................................................................19130.081000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................AGCA---GC---AGCAA----------------------------------------------------------------------------------CCACAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.071000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AACAACAGC------A------------GCAGCA---GC---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................AACAAC---------------------------------------------AGCAA---------------CAACAACAGC------A------------GCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................CAACAAC---------------------------------------------AGCAA---------------CAACAACAGC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................AACAGCA-------------------------------------G-CAACAACAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................AGCAA---------------CAACAACAGC------A------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AAC---------------------------------------------AGCAA---------------CAACAACAGC------A------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................A---------------CAACAACAGC------A------------GCAGCA---GC---AGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................AGCA-------------------------------------G-CAACAACAGCAACAAC---------------------------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................CAGCA-------------------------------------G-CAACAACAGCAACAAC---------------------------------------------AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................ACAGCA-------------------------------------G-CAACAACAGCAACAAC---------------------------------------------AGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000010000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CACAACAACAGCAGCAGCAG......................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ACAGCAACAAC---------------------------------------------AGCAA---------------CAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000010000000000000000000000000000000000000000000
....................................................................GCAACAGCA-------------------------------------G-CAACAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................AGCAACAGCA-------------------------------------G-CAACAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................CAACAACAGC------A------------GCAGCA---GC---AGCAA----------------------------------------------------------------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000001000000000000000000000000000000000000000000000
...............................................................AGC-AGCAACAGCA-------------------------------------G-CAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................AACAGCA-------------------------------------G-CAACAACAGCAACAAC---------------------------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................AGCAA---------------CAACAACAGC------A------------GCAGCA---GC---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................C---------------------------------------------AGCAA---------------CAACAACAGC------A------------GCAGCA---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................AGC------A------------GCAGCA---GC---AGCAA----------------------------------------------------------------------------------CCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CAACAGC------A------------GCAGCA---GC---AGCAA----------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................GCAA---------------CAACAACAGC------A------------GCAGCA---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................AACAACAGC------A------------GCAGCA---GC---AGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100000000000000000000000000000000000000000000000000000000000
...................................................................AGCAACAGCA-------------------------------------G-CAACAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................ACAGCAACAAC---------------------------------------------AGCAA---------------CAACAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................ACAGCAACAAC---------------------------------------------AGCAA---------------CAACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000100000000000000000000000000000000000000000000000
...................................................................AGCAACAGCA-------------------------------------G-CAACAACAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................C---------------------------------------------AGCAA---------------CAACAACAGC------A------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AACAACAGCAACAAC---------------------------------------------AGCAA---------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................CAACAGC------A------------GCAGCA---GC---AGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000001000000000000000000000000000000000000000000000
droGri2
AGCA--------GCA-------G-----C----A------------------------------AC-AGCAGCAGCA--------------------------------------------------------------GCAGC------------A---------ACAGCA---GC------------------------------------------------AACAGCA---G---CAACAGCAGCAG----------CAGCA---------ACAGCAG---------------CAACAGCAGCAACAGCAACAACAGCAACAACA---GCAACAGC---------------------------------------AACAGCAG---------------------------------------------------------------------------CAG---CAGAAGC---------------------------------------------AACA---------------ACAAC------------------AGCAGCTGCAACAGC------------AACAAATTGAGAAACAACAA-----CAG------------------TC--------------------------A----------------------------------GCCAATTTGGTT------------------GTTTC--CA------------------TTGCCACCGTAGCG-----CCGCAACTGCAA--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----CAG------------------TC--------------------------A----------------------------------GCCAATTTGGTT------------------............................................................1920.50110
........................................................................................................................................................................................................................................................CAG----------CAGCA---------ACAGCAG---------------CAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10220
..................................................................................................................................................................................................................................ACAGCA---G---CAACAGCAGCAG----------CAGCA---------ACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05110
......................G-----C----A------------------------------AC-AGCAGCAGCA--------------------------------------------------------------GCAGC------------A---------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110
.......................................................................GCAGCA--------------------------------------------------------------GCAGC------------A---------ACAGCA---GC------------------------------------------------AACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05110
.............................................................................................................................................................................................................................................................................................................................ACAGCAACAACA---GCAACAGC---------------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110
............GCA-------G-----C----A------------------------------AC-AGCAGCAGCA--------------------------------------------------------------GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
.......................................................................................................................................................................................................................................A---G---CAACAGCAGCAG----------CAGCA---------ACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05110
...........................................................................................................................................................................A---GC------------------------------------------------AACAGCA---G---CAACAGCAGCAG----------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05110
....................................................................................................................................................................................................................................................GCAGCAG----------CAGCA---------ACAGCAG---------------CAACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05110
...............................................................................................................................................................................................................................................CAACAGCAGCAG----------CAGCA---------ACAGCAG---------------CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110
droWil2
CTGT--------------------ATCAGCAGCA------GA----------------------------TACAT------------CAGCTG--------------------------------------------CAACAGCAACAACAGCAGCAGCAGATGCAACAGCAGATGCAACAG---------------CAA------CAACAGCAGCAGCAGCAG------------C---AGATGCAACAA----------CAGCA------------------------------------------ACAGCAGCAGATGCAACAACAGCAACAGCAG------------------------CAGCAAC---------AACAGCAGAT---------------------------------------------------GC---AAGA------GCAGCAAGAACGCCA---------------------------------------------ACAGCAACA---------------TCAGC------------------TGCAACATCAGCTGCAA------------CA------TC--------------AGCTGCAA---CATC----------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAA--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................ACAGCAG------------------------CAGCAAC---------AACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................20200.15300030
....................................................................................................................................................................................................................................................................................................................ACAGCAGCAGATGCAACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.14100010
....................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAG------------------------CAGCAAC---------AACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................2880.13100010
...................................................................................................................................................................................CAG---------------CAA------CAACAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200020
............................................................................................................................................CAGCAACAACAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200020
.................................................................................................................................................................................AACAG---------------CAA------CAACAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
......................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAG------------------------CAGCAAC---------A........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
............................................................................................................................................................................................................................................................................................................................................ACAGCAG------------------------CAGCAAC---------AACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.....................................................................................................................................................................................G---------------CAA------CAACAGCAGCAGCAGCAG------------C---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05110000
...............................................................................................................................................................................................................AACAGCAGCAGCAGCAG------------C---AGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...........................................................................................................................................ACAGCAACAACAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
.................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAGCAG------------------------CAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.................................................................................................................................................................................AACAG---------------CAA------CAACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...................................................................................................................................................................................CAG---------------CAA------CAACAGCAGCAGCAGCAG------------C---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.....................................................................................................................................................................................................CAA------CAACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
................................................................................................................................................................................CAACAG---------------CAA------CAACAGCAGCAGCAGCAG------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..................................................................................................................................................................................ACAG---------------CAA------CAACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
..................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAGCAG------------------------CAGCAAC---------A........................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.............................................................................................................................................AGCAACAACAGCAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAACAGCAG------------------------CAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100
....................................................................................................................................................................................AG---------------CAA------CAACAGCAGCAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..........................................................................................................................................AACAGCAACAACAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
....................................................................................................................................................................................AG---------------CAA------CAACAGCAGCAGCAGCAG------------C---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................................................G---------------CAA------CAACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.......................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAG------------------------CAGCAAC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
dp5
CTCCA-------GCA-------G-----C----A------------------------------AC-ATCATCATCA-------------------------------------GC----------------AG------CAGC------------ATCAG------------GCGC------------------------------------------------AGCAGCA---G---GCACA-------GCAACAGCAGCAGCA---------ACAGCAGGCTCAGCAGCAGGCTCAGCAACAGCAACAACAACA---------------GCAGCAACAACAGCAACAACAACAGCAACAACAGCAGC---------AACAGCAGCA---------------------------------------------------GC---------------------------A---------------------------------------------GCAGCAGCA---------------ACAAC------------------AACAGCAGCAACAG-----------------------------------------------------AAG---------------------------CT----------------------------------------------------A---AAGCAGG-----------------------------------------------CTCAG-GCGTCGTCAGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA---------------ACAAC------------------AACAGCAGCAACAG-----------------------------------------------------AAG---------------------------.................................................................................................................................2812.0020000000200
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------CT----------------------------------------------------A---AAGCAGG-----------------------------------------------CTCAG-GCGTCGTCAGT2812.0020200000000
.................................................................................................................................................................................................................................................................................................AGCAGGCTCAGCAACAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................AGGCTCAGCAACAGCAACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................GCAGGCTCAGCAACAGCAACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................................................................................................................................................................................................................................................................GCAGGCTCAGCAACAGCAACAACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................................................................................................................................................................................................................................................................................................GCAGGCTCAGCAACAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................CAGCAGGCTCAGCAGCAGGCTCAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
..................................................................................................................................................................................................................................................................................................GCAGGCTCAGCAACAGCAACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......................................................................................................................................................................................................................................................................AGCA---------ACAGCAGGCTCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................CA---------ACAGCAGGCTCAGCAGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010100000000
...................................................................................................................................................................................................................................................A-------GCAACAGCAGCAGCA---------ACAGCAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010000000
...........................................................................CA-------------------------------------GC----------------AG------CAGC------------ATCAG------------GCGC------------------------------------------------AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
......................................................................................................................................................................................................................................CA---G---GCACA-------GCAACAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
...............................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAGCAGC---------AACAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................2760.5030000000300
........................................................................................................................................................................................................................................................................CA---------ACAGCAGGCTCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000100000
................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAACAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.3570700000000
...CA-------GCA-------G-----C----A------------------------------AC-ATCATCATCA-------------------------------------GC----------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
....A-------GCA-------G-----C----A------------------------------AC-ATCATCATCA-------------------------------------GC----------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
................................................................................................................................................................................................................................................CACA-------GCAACAGCAGCAGCA---------ACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1110010000000
............................................................................................................................................................................................................................................................................................................CAACAGCAACAACAACA---------------GCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.1010010000000
.............................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAACAGCAGC---------AAC......................................................................................................................................................................................................................................................................................................................................................................................................................24110.0910010000000
.......................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGC---------AACAGCAGCA---------------------------------------------------GC---------------------------A---------------------------------------------G................................................................................................................................................................................................................................................................................25110.0910000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------A---------------------------------------------GCAGCAGCA---------------ACAAC------------------AACAGCAGCAAC......................................................................................................................................................................................................................28110.0910001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA---------------ACAAC------------------AACAGCAGCAAC......................................................................................................................................................................................................................26120.0810001000000
........................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAGCAACAACAGCAGC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................26130.0810010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---------------ACAAC------------------AACAGCAGCAACAG-----------------------------------------------------...............................................................................................................................................................24130.0810100000000
.................................................................................................................................................................................................................................................................................................................GCAACAACAACA---------------GCAGCAACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.0610010000000
..........................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAACAGCAGC---------A........................................................................................................................................................................................................................................................................................................................................................................................................................25160.0610100000000
.............................................................................................................................................................................................................................................................................................................................................................................GCAGC---------AACAGCAGCA---------------------------------------------------GC---------------------------A---------------------------------------------GCAGCAGCA---------------AC.......................................................................................................................................................................................................................................................29190.0510010000000
...............................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAGCAGC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.....................................................................................................................................................................................................................................................................................................................CAACAACA---------------GCAGCAACAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
..........................................................................................................................................................................................................................................................................................................................................................................ACAGCAGC---------AACAGCAGCA---------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
...............................................................................................................................................................................................................................................................................................................CAGCAACAACAACA---------------GCAGCAACAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000001000
...........................................................................................................................................................................................................................................................GCAACAGCAGCAGCA---------ACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...................................................................................................................................................................................................................................................A-------GCAACAGCAGCAGCA---------ACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000001
......................................................................................................................................................................................................................................................................................................................AACAACA---------------GCAGCAACAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.....................................................................................................................................................................................................................................................................................................................CAACAACA---------------GCAGCAACAACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA---------------ACAAC------------------AACAGCAGC.........................................................................................................................................................................................................................20200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGC---------AACAGCAGCA---------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
....................................................................................................................................................................................................................................................................................................................ACAACAACA---------------GCAGCAACAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAACAGCAGC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
droPer2
AGCA--------GCA-------G-----C----A------------------------------GC-AGCAACAGCA-------------------------------------G----------------------CAGCAGC------------A---------ACAGCA---GC------------------------------------------------AGCAGCA---G---CAACA-------GAAGCAGCAGCAGCA---------ACAGCAGCAACAGCAGCAG---TAA---------CAGCAGCAGCAGCAACAGCA---GCAGCAGC---------------------------------------AACAGCAG---------------------------------------------------------------------------CAG---CAACAGC---------------------------------------------AACA---------------GAAGC------------------AGCAGCAGCAGCAGC------------AACA------GCAACAGCAA-----CAGCAGCAG---CAGCAG------------------CTG--A-----GG-----------------------------------AAGAGC--------CTGAT--------------------------------------------C--------GG-GGG----GCCCAA--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................AGCA---GC------------------------------------------------AGCAGCA---G---CAACA-------GAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.061001000
....................................................................................................................................................................................................................................................................GCAGCA---------ACAGCAGCAACAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
......................................................................................................................................................................ACAGCA---GC------------------------------------------------AGCAGCA---G---CAACA-------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.............................................................................................................................................................................................................................................................AGCAGCAGCAGCA---------ACAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000
.................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------AACAGCAG---------------------------------------------------------------------------CAG---CAAC............................................................................................................................................................................................................................................................................................................................18200.051001000
..........................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCA---GCAGCAGC---------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------AGCAGCAGCAGCAGC------------AACA------GCAAC........................................................................................................................................................................................25200.051010000
.......................................................................................................................................................................................................................................................................................................................................CA---GCAGCAGC---------------------------------------AACAGCAG---------------------------------------------------------------------------C.....................................................................................................................................................................................................................................................................................................................................19200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-----CAGCAGCAG---CAGCAG------------------CT........................................................................................................................................20200.051001000
......................................................................AACAGCA-------------------------------------G----------------------CAGCAGC------------A---------ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
.......................................................................ACAGCA-------------------------------------G----------------------CAGCAGC------------A---------ACAGCA---GC------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
...........................................................................................................................................................................................................................................................................................................A---------CAGCAGCAGCAGCAACAGCA---GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
..............................................................................................................................................................................................................................................................................................................................CAGCAACAGCA---GCAGCAGC---------------------------------------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
..........................................................................................................................................................................CA---GC------------------------------------------------AGCAGCA---G---CAACA-------GA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
................................................................GC-AGCAACAGCA-------------------------------------G----------------------CAGCAGC------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
...................................................................................................................................................................................................................................................................................................................................ACAGCA---GCAGCAGC---------------------------------------AACAGCAG---------------------------------------------------------------------------C.....................................................................................................................................................................................................................................................................................................................................23200.051010000
..........................................................................................................................................................................................................................................................................................................AA---------CAGCAGCAGCAGCAACAGCA---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000
.................................................................................................................................................................................................................................................................GCAGCAGCA---------ACAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000
...................................................................AGCAACAGCA-------------------------------------G----------------------CAGCAGC------------A---------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
..................................................................................................................................................................................................................................................................................................................................AACAGCA---GCAGCAGC---------------------------------------AACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000
......................................................................AACAGCA-------------------------------------G----------------------CAGCAGC------------A---------ACAGCA---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000
......................G-----C----A------------------------------GC-AGCAACAGCA-------------------------------------G----------------------CAGCAGC------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
........................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAGCA---GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
...........................................................................CA-------------------------------------G----------------------CAGCAGC------------A---------ACAGCA---GC------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
...............................................................................................................................................................................................................................................................................................................................AGCAACAGCA---GCAGCAGC---------------------------------------AACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA-----CAGCAGCAG---CAGCA.............................................................................................................................................................19200.051001000
...................................................................AGCAACAGCA-------------------------------------G----------------------CAGCAGC------------A---------ACAGCA---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000
droAna3
TGGC--------------------GCCAC----CGCCGCAGTTCTGCGATTGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CACAGCCGCATCTGCCAACTAGCCAACAG------------TAT------CATACACA------------GCAGCAACAACAGCAACAGCAGCAG----------CAGCA---------TCA------------------------------------GCAG------CAGCAGCAACAGCAA------------------------CAGCAGC---------AACAACAACA---------------------------------------------------GC---------------------------A---------------------------------------------GCTGCAACA---------------GCAAC------------------TGCAACAACAACAGATG------------TT------GC--------------AGATGCAC---CAGCGGCTGTCCG----------GTGG--TGCTGG--C--C----------------------------------------------------------------------------------------CCGGGG------------------------C--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................AT------CATACACA------------GCAGCAACAACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002020000
.................................................................................................................................................................................................................ACACA------------GCAGCAACAACAGCAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
................................................................................................................................................................................AGCCAACAG------------TAT------CATACACA------------GCAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAC---CAGCGGCTGTCCG----------GT.........................................................................................................................................1911.001000001
................................................ATTGCAACGATGCCAAG-CAC---------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................CAACAACA---------------------------------------------------GC---------------------------A---------------------------------------------GCTGCAACA---------------GC.......................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................AACAG------------TAT------CATACACA------------GCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.................................................................................................................................................................................................................ACACA------------GCAGCAACAACAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCTGTCCG----------GTGG--TGCTGG--C--..........................................................................................................................2211.001100000
........................................................................................................................................................................................................................................ACAACAGCAACAGCAGCAG----------CAGCA---------TCA------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...................................................................................................................................................................GCATCTGCCAACTAGCCAACAG------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................TGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCTGTCCG----------GTGG--TGCTGG--C--C----------------------------------------------------------------------------------------CC...............................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------GCAAC------------------TGCAACAACAAC......................................................................................................................................................................................................................2220.501100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------GCAAC------------------TGCAACAACA........................................................................................................................................................................................................................2040.251010000
..........................................................................................................................................................................................................................................AACAGCAACAGCAGCAG----------CAGCA---------TC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.251000100
.....................................................................................................................................................................................................................................................................CAGCA---------TCA------------------------------------GCAG------CAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201100000
......................................................................................................................................................................................................................................................AGCAG----------CAGCA---------TCA------------------------------------GCAG------CAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131010000
.........................................................................................................................................................................................................................................................................A---------TCA------------------------------------GCAG------CAGCAGCAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
........................................................................................................................................................................................................................................................................................................................................AGCAACAGCAA------------------------CAGCAGC---------AAC......................................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
....................................................................................................................................................................................................................................AGCAACAACAGCAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000200
..........................................................................................................................................................................................................................................AACAGCAACAGCAGCAG----------CAGCA---------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102011000
...........................................................................................................................................................................................................................................................................................................................................AACAGCAA------------------------CAGCAGC---------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................19200.102100001
......................................................................................................................................................................................................................................CAACAACAGCAACAGCAGCAG----------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081010000
.......................................................................................................................................................................................................................................AACAACAGCAACAGCAGCAG----------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.081010000
...............................................................................................................................................................................................................................................CAACAGCAGCAG----------CAGCA---------TCA------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.081100000
....................................................................................................................................................................................................................................AGCAACAACAGCAACAGCAGCAG----------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24130.081000001
..................................................................................................................................................................................................................................GCAGCAACAACAGCAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.071010000
........................................................................................................................................................................................................................................................CAG----------CAGCA---------TCA------------------------------------GCAG------CAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.061010000
............................................................................................................................................................................................................................................CAGCAACAGCAGCAG----------CAGCA---------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
.......................................................................................................................................................................................................................................................GCAG----------CAGCA---------TCA------------------------------------GCAG------CAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
.....................................................................................................................................................................................................................A------------GCAGCAACAACAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
.........................................................................................................................................................................................................................................CAACAGCAACAGCAGCAG----------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
..................................................................................................................................................................................................................................GCAGCAACAACAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................CA------------------------------------GCAG------CAGCAGCAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
............................................................................................................................................................................................................................................................................................................................................ACAGCAA------------------------CAGCAGC---------AACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
............................................................................................................................................................................................................................................................................................................................AG------CAGCAGCAACAGCAA------------------------CAGCAGC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000
.......................................................................................................................................................................................................................................AACAACAGCAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
............................................................................................................................................................................................................................................................................................................................AG------CAGCAGCAACAGCAA------------------------CA.......................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..........................................................................................................................................................................................................................................................................................................................GCAG------CAGCAGCAACAGCAA------------------------CAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000001
...........................................................................................................................................................................................................................................ACAGCAACAGCAGCAG----------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................GCAGC---------AACAACAACA---------------------------------------------------GC---------------------------A---------------------------------------------.................................................................................................................................................................................................................................................................................18200.051010000
.....................................................................................................................................................................................................................A------------GCAGCAACAACAGCAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
....................................................................................................................................................................................................................................................GCAGCAG----------CAGCA---------TCA------------------------------------GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
.................................................................................................................................................................................................................................................................................................................................................AA------------------------CAGCAGC---------AACAACAACA---------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................19200.051001000
.....................................................................................................................................................................................................................................................................CAGCA---------TCA------------------------------------GCAG------CAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
........................................................................................................................................................................................................................................ACAACAGCAACAGCAGCAG----------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
droBip1
CCGCCT--------------------CAAA---A------------------------------A-------AGGCA------------GCTGCCGTCGCCGGTGGT-------------------------------------GGTCT--------------------------------G---------------AAT------CCTCTCCAGCAGCA------GCAGCAACAACAGCAACAGCAGCAG----------CAACA---------ACA------------------------------------------GCAGCAACAACAACAGCAA------------------------CAGCAGC---------AACAACAGCA---------------------------------------------------GC---------------------------A---------------------------------------------ACAACAACA---------------ACAAC------------------AGCAGCAACAACAGCTAGCCGGAGGGGTACAAATGGGAG-------------------------------TACAT----------TCGGGACCCGGTGG--CATGCTGGACGGTTCACCGCAAA-------------TCC-----------A---TAGTATG-----------------------------------------------CCCAG-TCCCTATGA--SizeHit CountTotal NormTotal
No Reads
droKik1
TGGC--------------------GCCAC----CGCCGCAGTTCTGCGATTGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CGCAGCCGCATCTGCCAACGAGCCAA---------------TAC------CATCCCCAGCAGCAGCAGCAGCAGCA---A---CAACAGCAGCAG----------CAGCA---------ACA------------------------------------------GCAGCAACTGCAGCAGCAT------------------------CAGCAGC---------TACAGCAGCA---------------------------------------------------GC---AACA------GCTGCAGCAG---CAACTGC---------------------------------------------AACA---------------GCAGC---------------------AGCAGCAGCAGATG---------CAACT------GC--------------AGATGCAC---CAACGGCTGTCGG----------GTGG--CGCCGG--T--C----------------------------------------------------------------------------------------CCGGCTC--------GG-TGGGCACCTTGGG--SizeHit CountTotal NormTotal
No Reads
droFic1
AGCA--------GCA-------A-----C----A------------------------------GG-AGCATAATCA------------GCAA-----------------------------------CAACAGCATC------------------AA------------------------------CAGCAA------------C------A------------GCATCA---AC---AGCAA-------------------CAACAGCAGCATCAACAG---------CAA---CAACAGCATCAACAGCAACAACAGCAACAACA---------------------------------------------------------GCA---------------------------------------------------A---------------------CA------ACAGCATCAACA---------------------------------ACAACAACA---------------ACAACACC------ACC------AGCAACAGCAACAG--------------------------------------------------------CAATCAAAACGTTGTGATCA---------AG-----------------------------------AGAA--------TCAGG---GG-----------------------------------CAGGCGGAGTT-----G-GGTAAACATCCAA--SizeHit CountTotal NormTotal
No Reads
droEle1
TGGC--------------------ACCAC----CGCCGCAGTTCTGCGATTGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CGCAGCCGCATCTCCCAACGAACCAA---------------TAT------CATCCACAGCAGCAACAG------------C---AACAGCAGCAA----------CAGCA---------ACA---------------------------------CCAGCAACTGCAGCAACAGCAGCAGCAA------------------------CAGCAGC---------AGCAGCAA------------------------------------------------------C---------------------------A---------------------------------------------ACTGCAACA---------------GCAAC------------------TGCAGCAGCAACAGATG------------CT------GC--------------AGATGCAC---CAGCGGCTGTCCG----------GCGG--TGCTGG--C--G----------------------------------------------------------------------------------------CTGGAGC--------TG-TGGGCACCTTGGG--SizeHit CountTotal NormTotal
No Reads
droRho1
TGGC--------------------GCCAC----CGCCGCAGTTCTGCGATTGCAACGATGCCAAG-CAC---------------------------------------GCGC--------------------------------------------CGCAGCCGCATCTGCCAACGAGCCAA---------------TAT------CATCCACAGCAGCAACAG------------C---AACAGCAGCAG----------CAGCA---------ACA---------------------------------GCAGCAGCAGCAGCAACTGCAGCAGC------------------------------------------AACAGCAGCA---------------------------------------------------AC---------------------------A---------------------------------------------ACTGCAACA---------------GCAAC------------------TGCAGCAGCAACAGATG------------CT------GC--------------AGATGCAC---CAGCGGCTGTCCG----------GCGG--TGCTGG--C--G----------------------------------------------------------------------------------------CTGGAGC--------TG-TGGGCACCTTGGG--SizeHit CountTotal NormTotal
No Reads
droBia1
TGATCT--------------------CAGCAATG-----------------------AGA----------ATG-----GACTAT---CAAATGCCACCGCCAGCACTGGCGC--------------------------------------------TACAG------------------------------------------------------CAGC------AGCAGCA---A---CAGCAGCAGCAG----------CAGCA---------TGGCCTG---------------CAACACCA---GCA---------GCAGCAATTGCAATTGCTG------------------------------CAGAATGTGCAACAGCAGCA---------------------------------------------------GC---------------------------A---------------------------------------------GCAGCAGCA---------------GCAAC------------------ACCAGCAGCAACAGTTG------------CT--------------------------------------------GG----------GCAACATGTCGC--A--G---A---------------CG-----------------------GCGGCC--------------------------------------TTGCCACCGCTGAGCAGCCT-GCCACTGCAA--SizeHit CountTotal NormTotal
No Reads
droTak1
AGCA--------ACA-------G-----C----A------------------------------AC-AGCAGCA--------------------------------------------------------------------------------------GCAGCAACATCTCATGGAGCAG---------------CAA------CACCTGCAACAGCAACAA------------C---AACAGCAGCAG----------CAGCA---------GCG---------------------------------ATTGCAGACGCAACAACAGCAGCAGCAA------------------------CACCAGC---------AATATCA---------------------------------------------------------------------------------------CT---------------ATGCAATGC------------------CCCACCA---------------GCAACAGCAGCAGCAAC------AGCAGCAACATCAGA----------------------GA-----------------------------------------GTTGTTAGCG-------------------------------------------------------------------------------------------------------ATTTTGC------------CGAGAGTTTCAA--SizeHit CountTotal NormTotal
No Reads
droEug1
GAA-------------------GTACCA-----------------GCAATTGC-----------------AATAT------------CAAATG--------------------------------------------CAGCAGCAATAT---------------------------------------GAATACCAGC---------------A------------GCAGCA---G---CACTAC---CAA----------CAGCA---------GTTCCAG---------------CAGCAGCA---ACA---------GCAGCAGCAGCAGCAGCAG------------------------------C---------AAAAGCAG---------------------------------------------------------------------------CA------GCAGCAGCAACA---------------------------------GCAGCAACA---------------GC---------AACATCTGA--------CACCTACGGC------------AACA------------CTTGTCCACCAG---CAGCAACATGA------------------------------GG-----------------------------------AACAAA--------TCGACT----------TGCTGTCCACTCAAC--------------------------------------CAACT--SizeHit CountTotal NormTotal
No Reads
dm3
GCCCGA------GG-------------------A------------------------------GC-AGCACCATCA-----------------------------------------------------------------------------------GCAGCAACTGCAGGCGGAGCACCACCATCAGCAA------------------CA------------GCACCA---AC---AACAA-------------------CAACAGCAGCAGCAGCAG---------------------------------CA---GCAGGAACTGCTGGAGCAG------------------------CAGCAGCGTG------AAATGCAG---------------------------------------------------------------------------GA------GCAGGCGCAACA---------------------------------GCAGCAGGT---------------GC---------ACCATC------ACCAGCAGGATCAGG----------------------AT-------------------------------CTCGC----------CGGCGACCAGGTGG--C--GCTGAAGGTGCCAC---------------------------------------------------------------------------------------------CACTCACCGTCAA--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC------ACCAGCAGGATCAGG----------------------AT-------------------------------CTCG........................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG----------------------AT-------------------------------CTCGC----------CGGCGACCAGGTGG--C--..........................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GCAG------------------------CAGCAGCGTG------AAATGCAG---------------------------------------------------------------------------GA------GC............................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGCAG---------------------------------------------------------------------------GA------GCAGGCGCAACA---------------------------------GCAG.............................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
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CCCA--------------------------------------------------AGAAGCTG-----GGGATG-----ACCCAG---CAGCTGCAACAG-------------CAAC----------------AG------CAGC------------AGCAG------------GTGC------------------------------------------------AACAGCA---A---CAACATCAGCAC----------CAGCA---------CCAGGTG---------------CAACAGCA---ACAGCAGCATCAGCAGCAACAGCAGCAGCAGC---------------------------------------AACAACAA---------------------------------------------------------------------------CAA---CAGGTGCAGCACCAACAGCAGCAGCAAA------------------------------------------------------------------AGCTTCAGTTGCAGC------------AACA------------ACAG-----CAG---CATCAACACAA---------------------------CTC--G----------------------------------AACAATTTGATT------------------GTCGG-CCATCGGGG-------------------------------------CAGCTC--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
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droSec2
CCGA--------GCG-------G-----G----A------------------------------CC-AGCAGAAGCTG---CTCCACCAATAT--------------------------------------------CCACAGCAATAC------------------------------------------------------------AGTC------------AGCAGCA---G---CAACAGCAGCAG----------CTGTA---------TCAGCAG------------------------------------------CAACAGCAGCAGCAT------------------------CAGCAGC---------AACAGCAGCA---------------------------------------------------GC---ATCA------GCAACCGCAG---CAACCGCAGCACCA---------------------------------GCAGCCGCA---------------GC------------AAC------ATCAGCCGCAGCATC------------ATCA------------AGAG-----CTG---CAGCAACATGT---------------------------TCC--C--TATAAA---------------------------ACT--------GCTGGCCTAGACAA-----------------------------------------------CTCAG-TCTCCTCCA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
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.....................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAT------------------------CAGCAGC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
droYak3
TGGCCATGCAGA-------------CCAC----CAGCATGCAGCAGCC----CATG------GAGC-AGTCGCTTCA-------------------------------------G-GACAACCACAATCTCT---ACCA---G------------------------------------------------------CAGCAGGAGC------A------------GCAGCA---A---CAGCATCCGCAG----------CAGCA---------GCAAGAG---------------CCACACCA---GCA---------GCAACAATCCCAGCAGGAG------------------------------C------------------------------------------------AGACGTCGCAGCAGGAACAACAGCAGCAGCAGCAGCAG------C------------------------------------------------------------A---GCAGCATCAACA------------------GTTGTTGCTG------CCG--------------------------------------------CAG---CAGGCA---------------------------CT------------------------------------------------------------------------------CAATCAAGCGGAATCCCTGCCGGCGGT-------GGGTCAGCAGCAG--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................GCAGGAGC------A------------GCAGCA---A---CAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCAGCAG------C------------------------------------------------------------A---GC...................................................................................................................................................................................................................................................................27120.08100100000000
......................................................................................................................................................................................................AGCAGGAGC------A------------GCAGCA---A---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.07100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG------C------------------------------------------------------------A---GCAGCATCAAC..........................................................................................................................................................................................................................................................20190.05100000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCAGCAG------C------------------------------------------------------------.........................................................................................................................................................................................................................................................................24200.05101000000000
droEre2
CTGA--------GCGCTGCGCAG---------GA------GT------------------A---CC-AACAGCATCAG---CA------GCAC-------------------CAGC----------------AACACCA---G---------------CA------------------------------GCAC---------------CAACA------------GCATCA---A---CAACAT---CAG----------CAACA---------TCAGCAG---------------CATCAGCA---ACA---------GCAGCATCAACAGCATCAGC---------AA------------CATCAGC---------AGCATCAGCA---------------------------------------------------GC---------------------------ACCAGCAACATCA---------------------------------ACAGCACCA---------------AC------------AAC------ATCAGCAGCATCAG--------------------------------------------CAG---CA---------GGGAG-------G------------------------------------CGGTGGGCCTGT-CTC--------CCAGC---AGCAAATGGTGCCGG-TCAGTGTCG----------------------------------CAGCTG--C--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................ATCAGCA---ACA---------GCAGCATCAACAGCATCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-CTC--------CCAGC---AGCAAATGGTGCCGG-TCAGT.................................................3111.0010000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CTC--------CCAGC---AGCAAATGGTGCCGG-TCAA..................................................2811.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGG-TCAGTGTCG----------------------------------CAGCT......1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCA---------------------------------ACAGCACCA---------------AC------------AAC------ATCAGC............................................................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAG--------------------------------------------CAG---CA---------GGGAG-------G------------------------------------C.....................................................................................................2011.0010000100
.......................................................................................................................................................................................................................................................................................................................................CAACAGCATCAGC---------AA------------CATCAGC---------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
........................................................................................................................................................................................................................................................................CA---------TCAGCAG---------------CATCAGCA---ACA---------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..................................................................................................................................................................................................................................................................................................................................................GC---------AA------------CATCAGC---------AGCATCAGCA---------------------------------------------------G...........................................................................................................................................................................................................................................................................................................................................................2220.5011000000
................................................................................................................................................................................................................................................AACAT---CAG----------CAACA---------TCAGCAG---------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310100000
...................................................................AACAGCATCAG---CA------GCAC-------------------CAGC----------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000100
..................................................................................................................................................................................................................................................CAT---CAG----------CAACA---------TCAGCAG---------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010010000
.............................................................................................................................................................................................................................................................................................................................................CATCAGC---------AA------------CATCAGC---------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010010000
......................................................................................................................................................................................................................................................................................GCAG---------------CATCAGCA---ACA---------GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.0911000000

Generated: 05/17/2015 at 10:24 PM