ID:

dmo_482

 Coordinate:

scaffold_6328:975986-976260 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.5 -12.8 -12.6 -12.5

Flybase annnotation

exon [dmoj_GLEANR_17048:3]; CDS [Dmoj\GI16327-cds]; exon [dmoj_GLEANR_17048:2]; CDS [Dmoj\GI16327-cds]; intron [Dmoj\GI16327-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCAGCAGTTGCGGCTCCATCAATACATGCAAAATTATGCGTGACTATAAGGTGAGCCAAGGGGGTCAAGGATGCGGTTACTGTCGTGAGCGGTGGGTGGGGGTGGCAAAGTAGCTGTACATCGAATTATGTGTACCTGGTGGCTAGTGCCCGGGCCATTGTCTATGTTTGTCCCTCTCACACATTGTTATATAGACATACACACACAAACACATGCATGCACTTCATTGCATACAACTTCCTCCCCCAGCCTCTCTCTTGCTCTATTTAAAAAAAAAAAAAAAAAGAAGAAGCTAATATGCATGGTTTCCATCTCTTTTTTACAGACGGGATACAGCTTTGGCTACGGCTTCGTTGACTACAACTCGGAGGTCGA
**************************************************.((..(((...............((.(((((((.....))))))).))....)))))**************************************************************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V056
head
 V110
male body		 M060
embryo
 V049
head
 M046
female body
 V041
embryo
........................................................................................GCGGTGGGTGGGGGTGGCA............................................................................................................................................................................................................................................................................ 19 0 1 2.00 2 1 0 0 1 0 0
..................................................GTGAGCCAAGGGGGTCAAGGATGCGGT.......................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................GCTTTGGCTACGGCTTCGTTGACT................ 24 0 1 1.00 1 0 0 0 0 1 0
.......................................................................................................................................CTGGTGGCTAGTGCCCAGGCCATTGT...................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................AGCGGTGGGTGGGGGTGGCA............................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................CAGCTTTGGCTACGGCTTCGTTGACT................ 26 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................AAAAAGCAGAAGCTCATATGCGT........................................................................ 23 3 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................ACAGCTTGGTGGACTACAACT.......... 21 3 3 0.33 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................AAAAAAAAAGAAGAAGCTCA............................................................................... 20 1 6 0.17 1 0 0 0 0 0 1
......................................................................................................................................................CGGGTCATTGTTAATGTTTG............................................................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 1 0 0
........................................................CGAGGGGGTTATGGATGCG............................................................................................................................................................................................................................................................................................................ 19 3 15 0.07 1 0 1 0 0 0 0

Anti-sense strand reads

AGTCGTCAACGCCGAGGTAGTTATGTACGTTTTAATACGCACTGATATTCCACTCGGTTCCCCCAGTTCCTACGCCAATGACAGCACTCGCCACCCACCCCCACCGTTTCATCGACATGTAGCTTAATACACATGGACCACCGATCACGGGCCCGGTAACAGATACAAACAGGGAGAGTGTGTAACAATATATCTGTATGTGTGTGTTTGTGTACGTACGTGAAGTAACGTATGTTGAAGGAGGGGGTCGGAGAGAGAACGAGATAAATTTTTTTTTTTTTTTTTCTTCTTCGATTATACGTACCAAAGGTAGAGAAAAAATGTCTGCCCTATGTCGAAACCGATGCCGAAGCAACTGATGTTGAGCCTCCAGCT
****************************************************************************************************************************************************************************************************************************************************************************.((..(((...............((.(((((((.....))))))).))....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V049
head
 V056
head
 V110
male body		 M046
female body
....................................................................................................................................................................................................................................GGTATGTTGGATGAGGGGGT............................................................................................................................... 20 3 5 1.60 8 7 1 0 0
.......................................................................................TCGCCACTCACACCCACTGTTT.......................................................................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................................ATGGTATGTTGGAGGAGGGGGT............................................................................................................................... 22 3 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................................TATGTTGGATGAGGGGGT............................................................................................................................... 18 2 5 0.80 4 2 2 0 0
................................................................................................................................................................................................................................................GAGGGGGTCGGTGAGAGA..................................................................................................................... 18 1 4 0.75 3 0 0 2 1
......................................................................................................................................................................................................................................TATGTTGGAGGAGGGAGT............................................................................................................................... 18 2 5 0.60 3 0 3 0 0
.....................................................................................................................................................................................................................................GTATGTTGGATGAGGGGGT............................................................................................................................... 19 2 2 0.50 1 0 1 0 0
....................................................................................................................................................................................................................................GGTATGTTGGAGGAGGGGGT............................................................................................................................... 20 2 2 0.50 1 0 1 0 0
..................................................................................................................................................................................................................................AGGGTATGTTGGAGGAGGGGGT............................................................................................................................... 22 3 3 0.33 1 0 1 0 0
....................................................................................................................................................................................................................................CATATGTTGGAGGAGGGAGT............................................................................................................................... 20 3 4 0.25 1 0 1 0 0
....................................................................................................................................................................................................................................CGTATGTTGGGTGAGGGGGT............................................................................................................................... 20 3 8 0.13 1 0 1 0 0
....................................................................................................................................................................................................................................CCTATGGTGGAGGAGGGGGT............................................................................................................................... 20 3 10 0.10 1 0 1 0 0
.....................................................................................................................................................................................................................................CTATGTTGGATGAGGGGGT............................................................................................................................... 19 3 11 0.09 1 0 1 0 0
.....................................................................................................................................................................................................................................TTATGTTGGAGGAGGGAGT............................................................................................................................... 19 3 16 0.06 1 0 1 0 0
....................................................................................................................................................................................................................................GGTATGTTGGAGGGGGGGGT............................................................................................................................... 20 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6328:975936-976310 + dmo_482 TCAGCAGTTGCGGCTCCATCAATACATGCAAAATTATGCGTGACTATAAGGTGAGCCAAGGGGGTCAAGGATG-----------CGGTTACTGTCG--TGA---GC----------------------------------------------------------------------------G--------------------GTGGGTGG-----------------------------GGGTGGCAAAGTAGCTGTACATCGAATTATGTGTACCTGGTGGCTAGTGCCCG-----------------------------------------------------------------------------------------------GGCCATTGTCTATG----TTTGTCCCTCTCACACATTGTTA---TATAGACATACA--CACACAAACACATGC-ATGCAC-----------TTC--------ATTGCATACA-----------------A-----------------CTT--C--------------------------------CTCCCC----------------------------CAGCCTCTCTCTTGC--------------TCTATT---T----------------AAAAAAAAAAAAAAAAAGAAGAAGCTAATATGCATGGTTTCCATCTCT--TTTTTACAGACGGGATACAGCTTTGGCTACGGCTTCGTTGACTACAACTCGGAGGTCGA
droVir3 scaffold_13042:2620484-2620778 - dvi_14425 TCAGCAGTTGTGGCTCCATCAATACATGCAAAATTATGCGAGACTACAAGGTAAGCAA---------------------------G-TAG------------------------------------------------------------------------------------------------------------------TGGGTGGCGCACGGGCAGGCGGACGGGGCGGGTGATGTGTGGGAGAGTA---------------------------------------------------------------------------------------------------GC---TCGC-------------------------ACGGATACCG------TGTGCCTGTCCCTGTCGCACATTGTAATTAAATAGATACACACACAC----------ATAATGCAA------------------------------------------------GCG-----CATGTTATCAGCAT--GCATC---TC------------------------------------------------------------------------GCTCTAT---TT-----------G----------------GCTAACG-------------------------CATG----TCATCTCT--TTTTCGCAGACCGGATACAGTTTTGGCTACGGTTTCGTCGACTACAACTCGGAGGCGGA
droGri2 scaffold_15203:5441593-5441920 - TCAGCAGTTGCGGCTCCATCAACACATGCAAAATAATGCGAGACTATAAGGTGAGTG---------------------------TGTCT----------------------------------------------------------------------------------------T------------A----TATTGGTCATGGGAGG----------------------------------G------------------------------------------------------------------------------------------------GAGAGGAGCAGCATCTCAC-------------------------CATGATAT-GTTTG--TGTGACTGTCCCTTTCGCACAGTGTAA---GACAGTTATACA--TAC----------AGAATGCAT-------------------------------------------------------------------GTT--AT------CCCTTTTC-----------------CTCACCGTGGGAGGAGGGCGGCCTATATTGGGATCAGCATCTGTGTTAT--------------TCAT--AAT-CCATG-TTGACGACCAACTATAT-----------------------------ATTTCCATCTCTGTTTATCGCAGACGGGATACAGTTTCGGCTACGGTTTCGTTGACTATAATGACGAGACGGA
droWil2 scf2_1100000004963:404337-404569 + TCAGCAGCTGCGGCTCCATTAATACCTGTAAAATAATGCGTGATTTCAAGGTAATTAA---------------------------ACTT----------------------------------------------------------------------------------------TG--------AA------TGTCCTTCGTGGGTGG-------------------------------------------------------------------------------------------------------------------------GATGGCC---------AA--TCACTAAACAG--------------------------------------G-----CTATCCTTGTCCCTCGATGAA-------------ATA--TAC----------AA-AACCAA-------------------------------------------------------------------ATA--ACCCT---TT----CATCTGTCTCACTC----TATTTGG---------------------------------------------------------------CTC-TCTCT----------------------------------------------------------------TTCTAGACCGGGTATAGTTTTGGTTACGGATTCGTTGATTACAATGCTGAAGCCGA
dp5 XL_group1a:4785122-4785431 - TTGCCAACTTCGGGGGCATCAACACCTGCAAAATCATGCGCGACTTCAAGGTAAGCCA---------------------------AA------------GCCAG----------------------------------------------------------------CC--------------------A----G-------GG------------------------------------------------------------------------------------------------------------AAG---------TAGGGT----AAGAGGCCACGCAGAATGCACGTCACAGGTCGTTGTTGTCAAGAGAGGCCTCCTGCTATTGCTCTTG-----TTGTCCTTGTCGCACCGTGCAA-----------TACATACAC----------AAACTGCAA------------------------------------------------CTC-----TAACCT--------GTGC---ATCC-TTTCTCTCTGGTTTATTT----CATCCCC---------------------------------------------------------------CAC-CCTCT-TTGGCAACGCGCCCGAC----------------------------------------------GCTCAGACTGGATATAGCTTCGGCTACGGCTTCGTCGACTACAGAACAGAGGCGGA
droPer2 scaffold_11:1372200-1372513 - TTGCCAACTTCGGGGGCATCAACACCTGCAAAATCATGCGCGACTTCAAGGTAAGCCA---------------------------AA------------GCCAG----------------------------------------------------------------CC--------------------AGCCGG-------GG------------------------------------------------------------------------------------------------------------AAG---------TAGGGT----AAGAGGCCACGCAGGATGCACGTCACAGGTCGTTGTTGTCAAGAGAGGCCTCCTGCTATTGCTCTTG-----TTGTCCTTGTCGCACCGTGCGA-----------TACATACAC----------AAACTGCAA------------------------------------------------CTC-----TAACCT--------GTGC---ATCC-TTTCTCTCTGGTTTATTT----CATCCCC---------------------------------------------------------------CAC-CCTCT-TTGGCAACGCGCCCGAC----------------------------------------------GCTCAGACTGGATATAGCTTCGGCTACGGCTTCGTCGACTACAGAACAGAGGCGGA
droAna3 scaffold_13117:1859107-1859523 - TCAGCGGATGTGGACCCATCAACACCTGTAAGATAATGCGCGACTTCAAGGTGAGCATAA------AAAATTGCGTT----------TTGCTCTTG--CTC---GTGGTGCG------A--CGCGTGTGTGTATATCAAAATATGCAAGAGCTGAGCTGAAGTGGGG--CAGCTGTGTGGGCAGCTG---------------------------------------------------------------------------------------------------GGGCCCGGATCCCTGTGTTTCCATGGAGAC---------CAGGGTA-CCAGGAATCCAGGTGCACTGCACGTCACAGGT------------------------------------G-----CCGTCCTTTTCACTCGTCGCAT---CACTG-CATACA--TAC-------------TTGCAAG-CTCCCACGCTCCACTGCTCCACTGCAG-------------------GAC-----TCATTC--------GCTC---ACTC-ACTCTCGCTCCTTTACTT---GCATCCCG---------------------------------------------------------------CCC-TCTAT-TCTGGA---CGCCCACC----------------------------------------------GCTCAGACCGGATACAGCTTCGGCTACGGGTTCGTGGACTACAAATCGGAGGCGGA
droBip1 scf7180000396425:204233-204635 + TCAGCGGATGTGGACCTATCAACACCTGTAAGATAATGCGCGACTTCAAGGTGAGCT---------------------------TAAAAATGGCATTTTGCC---AGGTGCGCCAGTGATGCGTGTGTGTGTATATCATAATATGCAGTAGCTGAGC--AAATGGGG--CAGCTGTGTGGGCAGCTG---------------------------------------------------------------------------------------------------GGGTCCGGATCCCTGTGTTTCCATGGGGAC---------CAGGGCA-CCAGGAACCCAGGTGCACTGCACGTCACAGGT------------------------------------G-----CCGTCCTTTTCTCTCGTCGCAC---T---G-CATACA--TAC-------------ATGCAAG-CTCCCACGCTCC--------ACTGCAG-------------------GTC-----TCGTTC--------GCTC---ACTC-ACTCTCGCTCCTTTATTT---GCATCCCG---------------------------------------------------------------CCC-TCTAC-TCTGGA---CGCCCACC----------------------------------------------GCTCAGACCGGATACAGCTTCGGCTACGGGTTCGTGGACTACAAATCAGAGTCGGA
droKik1 scf7180000302685:55214-55402 + TTTATGTTTATATACTTTAAA-CTATTTCGTATATATGTAAATAT-----------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------CA--------------------------------------------------------------------------------------------------------------------TACATATAT-----TT-AG------ATGTA--------TTTATAAAAAGCTTTTCTGT-------------------------GT-GGTT---TCTT-GTTGTTTGTTTTGTATAT--------------------------------------------TTTGCATTTTTCTATTTAAGTTTAAATTAT---T----------------ACA--AA----------------------------------------------AAACAAAAAAAAAAAAACGTCATATGCATATTTTTAATTT----------------
droFic1 scf7180000454072:1849278-1849552 - TTAGTGGCTGTGGACCCATCAACACCTGCAAGATCATGCGCGACTTCAAGGTGAGTC---------------------------TGATTGTGGTTTTTCGCG---A------------------------------------------------------A------------------------------------------GTGGGTGG--------------------------------------------------------------------------------------------------------C---------CATCTCA-TCTGGGACCCAGGTGAGCTGCACGTTACAGGT------------------------------------G-----CCATCCCTGTCGCACGCTGCA------------TACA--CAT----------AA-ATGCAT-------------------------------------------------------------------CAT--ACT-----C-ACACCCGCCCCC------------------------------------------------------------TCTCTTT---TTTCCATGCG---CGCGCCCTTGGGA---CGCCATCG----------------------------------------------AAACAGACCGGATATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGA
droEle1 scf7180000491193:3352056-3352180 + ACACAC-A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACA--CACACACACACGTAC-ATCCGA-GG------ATGCA--------CTGACTGACAGTGCGCCGGAAGTGGA-AGTGCAC-----------CCC--CCGCG---CC------------------------------------------------------------------------CATCT-C---CTTACCTGTG---C----------------ATAAAAA----------------------------------------------AAAAAAATAAAGAAAAACT-------------------------------------
droRho1 scf7180000778087:75286-75559 + TCAGCGGCTGCGGGCCCATCAACACCTGCAAGATTATGCGCGACTTCAAGGTGAGTTG---------------GGCACTGCCTTCGGTTTT--------GCA----------------------------------------------------------AGTGTGGCCC--------------------A----G-------TTGGGTGG-------------------------------------------------------------------------------------------------------------------------CCCAGGGAACCAGGTGAACTGCACGTCACAGGT------------------------------------G-----CTGTCCCTTTCGCACGCTGCA------------TACA--CAC----------GA-ATGCAT-------------------------------------------------------------------CTC--AACCT---CG--TCTCGA----------------------------------------------------------------CCTCTTC---TTTTCATGCC---CGCTCC-CTGGGA---CGCCA--------------------------------------------------AACAGACCGGATACAGCTTCGGCTACGGCTTCGTGGACTACAAAATGGAGTCGGA
droBia1 scf7180000301760:3835286-3835596 + TCAGCGGCTGCGGCCCCATCAACACCTGCAAGATAATGCGCGACTTTAAGGTAAGCACTCGGGG--------------------------TC---AC---------------------------------------------------------------------------C----TGGGCAGCTGGCCA--------------------------------------------------------------------------------------------------CCTGGAGACCTGGATTTCCAGGTGGGCTGGTTGCCATGGGCTA-CCAGG--CCCGGGTGAACTGCACGTCACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------GA-ATCTGG-------------------------------------------------------------------CT-GCTC---ACCC-ACGCCTCCTCTTTCACCTCTTCCACCTC--------------------------------------------CCTCCTC----TTCCATGGA---C----------------GCCCACG----------------------------------------------GAGCAGACGGGATATAGTTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGA
droTak1 scf7180000415289:445131-445191 + CTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----------------------------------------------TTTCAGACCGGTTATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGA
droEug1 scf7180000408973:101580-101823 - TTAGCGGCTGCGGGCCCATTAACACATGCAAGATAATGCGTGACTTCAAGGTAAGCT---------------------------CGATTGTCGTTT--TGAC--------------------------------------------------------------------------------AGTTG----------------GTGGGTGG-------------------------------------------------------------------------------------------------------------------------CCTAGGAAACCTGATGAGCTGCACGTCACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------AA-ACTGAT-------------------------------------------------------------------TTC--AT------CC------------------------------------------------------------------------TTTCTCC---TTTATATGCC---T----------------GCAAATG----------------------------------------------GAATAGACGGGATATAGCTTCGGCTACGGCTTCGTGGATTACAAAACAGAGATGGA
dm3 chrX:1265758-1265997 + TTAGCGGCTGCGGGCCCATCAACACCTGCAAGATAATGCGCGACTTCAAGGTAAGTT---------------------------CGGTTGTGGCCGC---------------------------------------------------------------------------C----TG--------AG---------------------------------------------------------------------------------------------------------------------------------------------CGCCCAGAATACCTGCTGAACTGCACGTAACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCAT-------G---TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACACT---CC------------------------------------------------------------------------CCTCTGC---TTTGTATGCC---C----------------GCCAACG----------------------------------------------GAACAGACCGGATATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGA
droSim2 x:1144831-1145068 + dsi_24443 TCAGCGGCTGCGGGCCCATCAACACCTGCAAGATAATGCGCGACTTCAAGGTAAGTT---------------------------CGGTTGTGGGCGC---------------------------------------------------------------------------C----TG--------AG---------------------------------------------------------------------------------------------------------------------------------------------TGCCCAGAATACCTGGTGAACTGCACGTAACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACACT---CC------------------------------------------------------------------------CCTCTGC---TTTGTATGCC---C----------------GCCAACG----------------------------------------------GAACAGACCGGATATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGA
droSec2 scaffold_10:1089199-1089436 + TCAGCGGCTGCGGGCCCATCAACACCTGCAAGATAATGCGCGACTTCAAGGTAAGTT---------------------------CGGTTGTTGGCGC---------------------------------------------------------------------------C----TG--------AG---------------------------------------------------------------------------------------------------------------------------------------------TGCCCAGAATACCTGGTGAACTGCACGTAACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACACT---CC------------------------------------------------------------------------CCTCTGC---TTTGTATGCC---C----------------GCCAACG----------------------------------------------GAACAGACCGGATATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGA
droYak3 X:1173448-1173701 + TCAGTGGCTGCGGGCCCATCAACACCTGCAAGATAATGCGCGACTTCAAGGTAAGTT---------------------------CGGTTGTGGGTGC---------------------------------------------------------------------------C----TG--------GATG----------------------CATAGACAC-------------------------------------------------------------------------------------------------------CTGGATGCCCAGGGTACCTGGTGAACTGCACGTCACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACGCT---CC------------------------------------------------------------------------CCTCTTC---TCCGCATGCC---C----------------GCCAACG----------------------------------------------GTACAGACCGGATATAGCTTCGGTTACGGCTTCGTGGACTACAAAACGGAGTCGGA
droEre2 scaffold_4644:1249446-1249691 + TTAGCGGCTGCGGGCCCATCAACACCTGCAAGATTATGCGGGACTTCAAGGTAAGTT---------------------------CGGTTGTTGGTGC---------------------------------------------------------------------------C----TG--------GGT------------------------------AC-------------------------------------------------------------------------------------------------------CTGGCTGCCCGGGATACCAGGTGAATTGCACGTCACAGGT------------------------------------G-----CCATCCCTGTCGCACATTGCA------------TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACAAT---CC------------------------------------------------------------------------CCTCTTC---TTCGCATGCC---C----------------GCCAACG----------------------------------------------GAACAGACCGGATATAGCTTCGGTTACGGCTTCGTGGACTACAAAACGGAGTCGGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCAGCAGTTGCGGCTCCATCAATACATGCAAAATTATGCGTGACTATAAGGTGAGCCAAGGGGGTCAAGGATG-----------CGGTTACTGTCG--TGA---GC----------------------------------------------------------------------------G--------------------GTGGGTGG-----------------------------GGGTGGCAAAGTAGCTGTACATCGAATTATGTGTACCTGGTGGCTAGTGCCCG-----------------------------------------------------------------------------------------------GGCCATTGTCTATG----TTTGTCCCTCTCACACATTGTTA---TATAGACATACA--CACACAAACACATGC-ATGCAC-----------TTC--------ATTGCATACA-----------------A-----------------CTT--C--------------------------------CTCCCC----------------------------CAGCCTCTCTCTTGC--------------TCTATT---T----------------AAAAAAAAAAAAAAAAAGAAGAAGCTAATATGCATGGTTTCCATCTCT--TTTTTACAGACGGGATACAGCTTTGGCTACGGCTTCGTTGACTACAACTCGGAGGTCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................GC----------------------------------------------------------------------------G--------------------GTGGGTGG-----------------------------GGGTGGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002001100
..................................................GTGAGCCAAGGGGGTCAAGGATG-----------CGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGCTACGGCTTCGTTGACT................2411.001100000
....................................................................................................A---GC----------------------------------------------------------------------------G--------------------GTGGGTGG-----------------------------GGGTGGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTTGGCTACGGCTTCGTTGACT................2611.001000010
droVir3
TCAGCAGTTGTGGCTCCATCAATACATGCAAAATTATGCGAGACTACAAGGTAAGCAA---------------------------G-TAG------------------------------------------------------------------------------------------------------------------TGGGTGGCGCACGGGCAGGCGGACGGGGCGGGTGATGTGTGGGAGAGTA---------------------------------------------------------------------------------------------------GC---TCGC-------------------------ACGGATACCG------TGTGCCTGTCCCTGTCGCACATTGTAATTAAATAGATACACACACAC----------ATAATGCAA------------------------------------------------GCG-----CATGTTATCAGCAT--GCATC---TC------------------------------------------------------------------------GCTCTAT---TT-----------G----------------GCTAACG-------------------------CATG----TCATCTCT--TTTTCGCAGACCGGATACAGTTTTGGCTACGGTTTCGTCGACTACAACTCGGAGGCGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGGATACAGTTTTGGCTAC.............................2212.002001000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCGTCGACTACAACTCGGA......2212.002000000000001000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGCTACGGTTTCGTCGA..................2112.002000000000000000000000000000000000000000000000000000000000000002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGCTACGGTTTCGT.....................1912.002000000000000000000000000000000000000100000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTTTTGGCTACGGTTT........................2011.001001000000000000000000000000000000000000000000000000000000000000
..............TCCATCAATACATGCAAAATTATGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGCTACGGTTTCGTCGACTA...............2511.001000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTTGGCTACGGTTTCGTCGACTACA.............2811.001000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGATACAGTTTTGGCT...............................1811.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCTACGGTTTCGT.....................1711.001000000000000000000000000000000000000000000000000000000000000001
.......................ACATGCAAAATTATGCGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTTTGGCTACGGTTTCGT.....................2111.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGGATACAGTTTTGGCT...............................2011.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGGATACAGTTTTGGCTACG............................2311.001000000000000000000000000000000000000010000000000000000000000000
................................ATTATGCGAGACTACAAGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGTTTTGGCTACGGTTTCGTC....................2511.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTACGGTTTCGTCGA..................1811.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTTTGGCTACGGTTTCGTCGACT................2711.001000000000000000000000000000000000000000000000000000000000010000
droGri2
TCAGCAGTTGCGGCTCCATCAACACATGCAAAATAATGCGAGACTATAAGGTGAGTG---------------------------TGTCT----------------------------------------------------------------------------------------T------------A----TATTGGTCATGGGAGG----------------------------------G------------------------------------------------------------------------------------------------GAGAGGAGCAGCATCTCAC-------------------------CATGATAT-GTTTG--TGTGACTGTCCCTTTCGCACAGTGTAA---GACAGTTATACA--TAC----------AGAATGCAT-------------------------------------------------------------------GTT--AT------CCCTTTTC-----------------CTCACCGTGGGAGGAGGGCGGCCTATATTGGGATCAGCATCTGTGTTAT--------------TCAT--AAT-CCATG-TTGACGACCAACTATAT-----------------------------ATTTCCATCTCTGTTTATCGCAGACGGGATACAGTTTCGGCTACGGTTTCGTTGACTATAATGACGAGACGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCGGCTACGGTTTCGTTG...................2111.00101
droWil2
TCAGCAGCTGCGGCTCCATTAATACCTGTAAAATAATGCGTGATTTCAAGGTAATTAA---------------------------ACTT----------------------------------------------------------------------------------------TG--------AA------TGTCCTTCGTGGGTGG-------------------------------------------------------------------------------------------------------------------------GATGGCC---------AA--TCACTAAACAG--------------------------------------G-----CTATCCTTGTCCCTCGATGAA-------------ATA--TAC----------AA-AACCAA-------------------------------------------------------------------ATA--ACCCT---TT----CATCTGTCTCACTC----TATTTGG---------------------------------------------------------------CTC-TCTCT----------------------------------------------------------------TTCTAGACCGGGTATAGTTTTGGTTACGGATTCGTTGATTACAATGCTGAAGCCGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTTGGTTACGGATTCGTT....................2211.00100100
.................ATTAATACCTGTAAAATAATGCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACAATGCTGAAGCCGA2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAGTTTTGGTTACGGATTCGTT....................2511.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTACGGATTCGTTGATTACA.............2311.00100001
dp5
TTGCCAACTTCGGGGGCATCAACACCTGCAAAATCATGCGCGACTTCAAGGTAAGCCA---------------------------AA------------GCCAG----------------------------------------------------------------CC--------------------A----G-------GG------------------------------------------------------------------------------------------------------------AAG---------TAGGGT----AAGAGGCCACGCAGAATGCACGTCACAGGTCGTTGTTGTCAAGAGAGGCCTCCTGCTATTGCTCTTG-----TTGTCCTTGTCGCACCGTGCAA-----------TACATACAC----------AAACTGCAA------------------------------------------------CTC-----TAACCT--------GTGC---ATCC-TTTCTCTCTGGTTTATTT----CATCCCC---------------------------------------------------------------CAC-CCTCT-TTGGCAACGCGCCCGAC----------------------------------------------GCTCAGACTGGATATAGCTTCGGCTACGGCTTCGTCGACTACAGAACAGAGGCGGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACAGAACAGAGGCG..1911.0010000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACAGAACAGAGGC...1811.0010000000001
droPer2
TTGCCAACTTCGGGGGCATCAACACCTGCAAAATCATGCGCGACTTCAAGGTAAGCCA---------------------------AA------------GCCAG----------------------------------------------------------------CC--------------------AGCCGG-------GG------------------------------------------------------------------------------------------------------------AAG---------TAGGGT----AAGAGGCCACGCAGGATGCACGTCACAGGTCGTTGTTGTCAAGAGAGGCCTCCTGCTATTGCTCTTG-----TTGTCCTTGTCGCACCGTGCGA-----------TACATACAC----------AAACTGCAA------------------------------------------------CTC-----TAACCT--------GTGC---ATCC-TTTCTCTCTGGTTTATTT----CATCCCC---------------------------------------------------------------CAC-CCTCT-TTGGCAACGCGCCCGAC----------------------------------------------GCTCAGACTGGATATAGCTTCGGCTACGGCTTCGTCGACTACAGAACAGAGGCGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TCAGCGGATGTGGACCCATCAACACCTGTAAGATAATGCGCGACTTCAAGGTGAGCATAA------AAAATTGCGTT----------TTGCTCTTG--CTC---GTGGTGCG------A--CGCGTGTGTGTATATCAAAATATGCAAGAGCTGAGCTGAAGTGGGG--CAGCTGTGTGGGCAGCTG---------------------------------------------------------------------------------------------------GGGCCCGGATCCCTGTGTTTCCATGGAGAC---------CAGGGTA-CCAGGAATCCAGGTGCACTGCACGTCACAGGT------------------------------------G-----CCGTCCTTTTCACTCGTCGCAT---CACTG-CATACA--TAC-------------TTGCAAG-CTCCCACGCTCCACTGCTCCACTGCAG-------------------GAC-----TCATTC--------GCTC---ACTC-ACTCTCGCTCCTTTACTT---GCATCCCG---------------------------------------------------------------CCC-TCTAT-TCTGGA---CGCCCACC----------------------------------------------GCTCAGACCGGATACAGCTTCGGCTACGGGTTCGTGGACTACAAATCGGAGGCGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATACAGCTTCGGCTACGGGTT........................2311.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGACTACAAATCGGAGGC...2111.001000010
..................................................................................................................................................................TGGGG--CAGCTGTGTGGGCAGCTG---------------------------------------------------------------------------------------------------GGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...GCGGATGTGGACCCATCAACACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
........TGTGGACCCATCAACACCTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................................TCCATGGAGAC---------CAGGGTA-CCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCACTGCTCCACTGCAG-------------------...............................................................................................................................................................................................................................................................1920.501100000
droBip1
TCAGCGGATGTGGACCTATCAACACCTGTAAGATAATGCGCGACTTCAAGGTGAGCT---------------------------TAAAAATGGCATTTTGCC---AGGTGCGCCAGTGATGCGTGTGTGTGTATATCATAATATGCAGTAGCTGAGC--AAATGGGG--CAGCTGTGTGGGCAGCTG---------------------------------------------------------------------------------------------------GGGTCCGGATCCCTGTGTTTCCATGGGGAC---------CAGGGCA-CCAGGAACCCAGGTGCACTGCACGTCACAGGT------------------------------------G-----CCGTCCTTTTCTCTCGTCGCAC---T---G-CATACA--TAC-------------ATGCAAG-CTCCCACGCTCC--------ACTGCAG-------------------GTC-----TCGTTC--------GCTC---ACTC-ACTCTCGCTCCTTTATTT---GCATCCCG---------------------------------------------------------------CCC-TCTAC-TCTGGA---CGCCCACC----------------------------------------------GCTCAGACCGGATACAGCTTCGGCTACGGGTTCGTGGACTACAAATCAGAGTCGGASizeHit CountTotal NormTotal
No Reads
droKik1
TTTATGTTTATATACTTTAAA-CTATTTCGTATATATGTAAATAT-----------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------CA--------------------------------------------------------------------------------------------------------------------TACATATAT-----TT-AG------ATGTA--------TTTATAAAAAGCTTTTCTGT-------------------------GT-GGTT---TCTT-GTTGTTTGTTTTGTATAT--------------------------------------------TTTGCATTTTTCTATTTAAGTTTAAATTAT---T----------------ACA--AA----------------------------------------------AAACAAAAAAAAAAAAACGTCATATGCATATTTTTAATTT----------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTAGTGGCTGTGGACCCATCAACACCTGCAAGATCATGCGCGACTTCAAGGTGAGTC---------------------------TGATTGTGGTTTTTCGCG---A------------------------------------------------------A------------------------------------------GTGGGTGG--------------------------------------------------------------------------------------------------------C---------CATCTCA-TCTGGGACCCAGGTGAGCTGCACGTTACAGGT------------------------------------G-----CCATCCCTGTCGCACGCTGCA------------TACA--CAT----------AA-ATGCAT-------------------------------------------------------------------CAT--ACT-----C-ACACCCGCCCCC------------------------------------------------------------TCTCTTT---TTTCCATGCG---CGCGCCCTTGGGA---CGCCATCG----------------------------------------------AAACAGACCGGATATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGASizeHit CountTotal NormTotal
No Reads
droEle1
ACACAC-A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACA--CACACACACACGTAC-ATCCGA-GG------ATGCA--------CTGACTGACAGTGCGCCGGAAGTGGA-AGTGCAC-----------CCC--CCGCG---CC------------------------------------------------------------------------CATCT-C---CTTACCTGTG---C----------------ATAAAAA----------------------------------------------AAAAAAATAAAGAAAAACT-------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCAGCGGCTGCGGGCCCATCAACACCTGCAAGATTATGCGCGACTTCAAGGTGAGTTG---------------GGCACTGCCTTCGGTTTT--------GCA----------------------------------------------------------AGTGTGGCCC--------------------A----G-------TTGGGTGG-------------------------------------------------------------------------------------------------------------------------CCCAGGGAACCAGGTGAACTGCACGTCACAGGT------------------------------------G-----CTGTCCCTTTCGCACGCTGCA------------TACA--CAC----------GA-ATGCAT-------------------------------------------------------------------CTC--AACCT---CG--TCTCGA----------------------------------------------------------------CCTCTTC---TTTTCATGCC---CGCTCC-CTGGGA---CGCCA--------------------------------------------------AACAGACCGGATACAGCTTCGGCTACGGCTTCGTGGACTACAAAATGGAGTCGGASizeHit CountTotal NormTotal
No Reads
droBia1
TCAGCGGCTGCGGCCCCATCAACACCTGCAAGATAATGCGCGACTTTAAGGTAAGCACTCGGGG--------------------------TC---AC---------------------------------------------------------------------------C----TGGGCAGCTGGCCA--------------------------------------------------------------------------------------------------CCTGGAGACCTGGATTTCCAGGTGGGCTGGTTGCCATGGGCTA-CCAGG--CCCGGGTGAACTGCACGTCACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------GA-ATCTGG-------------------------------------------------------------------CT-GCTC---ACCC-ACGCCTCCTCTTTCACCTCTTCCACCTC--------------------------------------------CCTCCTC----TTCCATGGA---C----------------GCCCACG----------------------------------------------GAGCAGACGGGATATAGTTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGASizeHit CountTotal NormTotal
No Reads
droTak1
CTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----------------------------------------------TTTCAGACCGGTTATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGASizeHit CountTotal NormTotal
No Reads
droEug1
TTAGCGGCTGCGGGCCCATTAACACATGCAAGATAATGCGTGACTTCAAGGTAAGCT---------------------------CGATTGTCGTTT--TGAC--------------------------------------------------------------------------------AGTTG----------------GTGGGTGG-------------------------------------------------------------------------------------------------------------------------CCTAGGAAACCTGATGAGCTGCACGTCACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------AA-ACTGAT-------------------------------------------------------------------TTC--AT------CC------------------------------------------------------------------------TTTCTCC---TTTATATGCC---T----------------GCAAATG----------------------------------------------GAATAGACGGGATATAGCTTCGGCTACGGCTTCGTGGATTACAAAACAGAGATGGASizeHit CountTotal NormTotal
No Reads
dm3
TTAGCGGCTGCGGGCCCATCAACACCTGCAAGATAATGCGCGACTTCAAGGTAAGTT---------------------------CGGTTGTGGCCGC---------------------------------------------------------------------------C----TG--------AG---------------------------------------------------------------------------------------------------------------------------------------------CGCCCAGAATACCTGCTGAACTGCACGTAACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCAT-------G---TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACACT---CC------------------------------------------------------------------------CCTCTGC---TTTGTATGCC---C----------------GCCAACG----------------------------------------------GAACAGACCGGATATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............GGCCCATCAACACCTGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CGGTTGTGGCCGC---------------------------------------------------------------------------C----TG--------AG---------------------------------------------------------------------------------------------------------------------------------------------CGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACCTGCAAGATAATGCGCGACTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACTACAAAACGGAGTCG..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTGGACTACAAAAC.........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGCTTCGGCTACGGCTTCGTG....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTTCGGCTACGGCTTCGTGGACT................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAACACCTGCAAGATAATGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGATATAGCTTCGGCTAC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--AC.....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGCTTCGTGGACTACAAAACGGAG.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTGGACTACAAAACGGG......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATATAGCTTCGGCTACGGCTTCGTGG...................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGCC---C----------------GCCAACG----------------------------------------------GAACA...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTTCGGCTACGGCTTCGTGGACA................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CCATCAACACCTGCAAGATAATGCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCTTCGGCTACGGCTTCGTGGAC.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GT------------------------------------G-----CCATCCCTGTCGCACGTTG.........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
............................CAAGATAATGCGCGACTTCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTCGGCTACGGCTTCGTGGACTAC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTTCGTGGACTACAAAAC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTGGACTACAAAACG........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACCTGCAAGATAATGCGCGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................CACCTGCAAGATAATGCGCGACTTCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCC---C----------------GCCAACG----------------------------------------------GAACAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCGGCTACGGCTTCGTGGAC.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................GCAAGATAATGCGCGACTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCTTCGGCTACGGCTTCGTGGA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACTACAAAACGGAGT....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTCGGCTACGGCTTCGTGGAC.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCTTCGTGGACTACAAAACGGAGT....2711.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTTCGGCTACGGCTTCGTGGA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCGGCTACGGCTTCGTGGACT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACACCTGCAAGATAATGCGCGACTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACG----------------------------------------------GAACAGACCGGATATAGCTTC...................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTGGACTACAAAACGGA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTT---------------------------CGGTTGTGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGGCTACGGCTTCGTGGA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------------CCTCTGC---TTTGTATGCC---C----------------G............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCTTCGGCTACGGCTTCGTG....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGATATAGCTTCGGCTACG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCC---C----------------GCCAACG----------------------------------------------GAACAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................AACACCTGCAAGATAATGCGCGACTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCAGCGGCTGCGGGCCCATCAACACCTGCAAGATAATGCGCGACTTCAAGGTAAGTT---------------------------CGGTTGTGGGCGC---------------------------------------------------------------------------C----TG--------AG---------------------------------------------------------------------------------------------------------------------------------------------TGCCCAGAATACCTGGTGAACTGCACGTAACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACACT---CC------------------------------------------------------------------------CCTCTGC---TTTGTATGCC---C----------------GCCAACG----------------------------------------------GAACAGACCGGATATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................CGGTTGTGGGCGC---------------------------------------------------------------------------C----TG--------AG---------------------------------------------------------------------------------------------------------------------------------------------TGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000002000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGC---TTTGTATGCC---C----------------GCC..........................................................................................................2011.00100001000000000000
.........................CTGCAAGATAATGCGCGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTGGACTACAAAACGG.......2020.50100000000000001000
droSec2
TCAGCGGCTGCGGGCCCATCAACACCTGCAAGATAATGCGCGACTTCAAGGTAAGTT---------------------------CGGTTGTTGGCGC---------------------------------------------------------------------------C----TG--------AG---------------------------------------------------------------------------------------------------------------------------------------------TGCCCAGAATACCTGGTGAACTGCACGTAACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACACT---CC------------------------------------------------------------------------CCTCTGC---TTTGTATGCC---C----------------GCCAACG----------------------------------------------GAACAGACCGGATATAGCTTCGGCTACGGCTTCGTGGACTACAAAACGGAGTCGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TCAGTGGCTGCGGGCCCATCAACACCTGCAAGATAATGCGCGACTTCAAGGTAAGTT---------------------------CGGTTGTGGGTGC---------------------------------------------------------------------------C----TG--------GATG----------------------CATAGACAC-------------------------------------------------------------------------------------------------------CTGGATGCCCAGGGTACCTGGTGAACTGCACGTCACAGGT------------------------------------G-----CCATCCCTGTCGCACGTTGCA------------TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACGCT---CC------------------------------------------------------------------------CCTCTTC---TCCGCATGCC---C----------------GCCAACG----------------------------------------------GTACAGACCGGATATAGCTTCGGTTACGGCTTCGTGGACTACAAAACGGAGTCGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTTCGGTTACGGCTTCGTG....................2311.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGACTACAAAACGGAGT....2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACTACAAAACGGAGTC...2011.00110000000000
droEre2
TTAGCGGCTGCGGGCCCATCAACACCTGCAAGATTATGCGGGACTTCAAGGTAAGTT---------------------------CGGTTGTTGGTGC---------------------------------------------------------------------------C----TG--------GGT------------------------------AC-------------------------------------------------------------------------------------------------------CTGGCTGCCCGGGATACCAGGTGAATTGCACGTCACAGGT------------------------------------G-----CCATCCCTGTCGCACATTGCA------------TACA--CAC----------GA-ATGCAG-------------------------------------------------------------------CTT--ACAAT---CC------------------------------------------------------------------------CCTCTTC---TTCGCATGCC---C----------------GCCAACG----------------------------------------------GAACAGACCGGATATAGCTTCGGTTACGGCTTCGTGGACTACAAAACGGAGTCGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTC---TTCGCATGCC---C----------------GCCAACG----------------------------------------------GAA.....................................................2711.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGCTTCGGTTACGGC..........................1911.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACTACAAAACGGAGT....1911.0010000010

Generated: 05/17/2015 at 10:24 PM