ID:

dmo_457

 Coordinate:

scaffold_6328:388314-388464 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dmoj_GLEANR_16985:6]; CDS [Dmoj\GI16263-cds]; intron [Dmoj\GI16263-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-
GA-richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACTCGCATTACACACAAACTCTATCCCTCCCTCTCTTTCTGTCACTCTCTCTCTCTCTCTCTCTCTCACTGTCTCTTGCTCTCTTTGTGTCTTTTTCACTCTTTCGCTGCCATGCTGGCGTACATTTTGTGTGTGTGTGTGTGTGTTTTCGTTTGATAATTTGTTGGCAACAATCAATAACATTACTTGCATTACTTGCAGAGCAACAGCAACAGGAACAGGAACAACAACAACAGCAGCAGCAGCAGCAG
**************************************************....................................(((.......)))((...((..(((((((..((((((((...))))))))..))))).))...))...))(((((((((((......))))))).)))).(((((.....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
................................................................................................................................................GTTTTCTTTTGATAATTTGTTGGCA.................................................................................. 25 1 1 1.00 1 1 0
.........................................................................................................................................................................................................................ACAGGAACAACAACAACAGCAGCAG......... 25 0 2 0.50 1 0 1
............................................................................................................................................................................................................AACAGCAACAGGAACAGGA............................ 19 0 2 0.50 1 0 1
...............................................................................................................................................................................................................................ACAACAACAACAGCAGCAGCAGCAGCA. 27 0 20 0.10 2 2 0
.............................................................................................................................................................................................................................GAACAACAACAACAGCAGC........... 19 0 20 0.05 1 1 0

Anti-sense strand reads

TGAGCGTAATGTGTGTTTGAGATAGGGAGGGAGAGAAAGACAGTGAGAGAGAGAGAGAGAGAGAGAGTGACAGAGAACGAGAGAAACACAGAAAAAGTGAGAAAGCGACGGTACGACCGCATGTAAAACACACACACACACACACAAAAGCAAACTATTAAACAACCGTTGTTAGTTATTGTAATGAACGTAATGAACGTCTCGTTGTCGTTGTCCTTGTCCTTGTTGTTGTTGTCGTCGTCGTCGTCGTC
**************************************************....................................(((.......)))((...((..(((((((..((((((((...))))))))..))))).))...))...))(((((((((((......))))))).)))).(((((.....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V056
head
 M046
female body
 V041
embryo
 V049
head
 V110
male body
..........GTATGCTTGAGATAGGGAGCGA........................................................................................................................................................................................................................... 22 3 4 1.50 6 5 0 0 1 0
..........GTTTGCTTTAGATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..........GTGTGCTTGAGATAGGGTGCGA........................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..........GTTTGCTTGAGATAGGGAGCGA........................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
.......................................................................................................................................ACACCCACGGAAAAGCAAACTAT............................................................................................. 23 3 1 1.00 1 0 1 0 0 0
..........GTATGCTTGAGATAGGGAGGGA........................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..........GTATGTTTGAGATAGGGAGCGA........................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..........GTCTCTTTGATATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..........GTTTCTTTGAGATAGGGAGGGA........................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..........GTATGCTTGTGATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 2 1.00 2 1 0 0 1 0
..........GTTTCTTTGAGATAGGGTGGGA........................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..........GTGGTGTTGAGATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0
..........GTATCTTTGAGATAAGGAGGGA........................................................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0
..........GTATGCTTGATATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0
............................................................................................................................................................CCTAAACAACCGTTGTTAGTTTT........................................................................ 23 3 2 0.50 1 1 0 0 0 0
..........GTATCTTTGAGATAGGGAGCGA........................................................................................................................................................................................................................... 22 3 6 0.50 3 2 0 0 1 0
..........GTGTTCTTGAGATAGGGAGCG............................................................................................................................................................................................................................ 21 3 2 0.50 1 0 0 1 0 0
..........GTGGGATTGTGATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 1 0 0
..........GTCTGCTTGAGATATGGAGGGA........................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0
..........GCATGCTTGAGATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0
..........GTATGTTTGAGATATGGAGCGA........................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0
..........GTATCTTTGTGATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0
..........GTATGCTTGAGATATGGAGGGA........................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0
..........GTATCCTTGAGATAGGGAGGGA........................................................................................................................................................................................................................... 22 3 4 0.25 1 1 0 0 0 0
..........GTATGTTTGTGATAGGGAGCGA........................................................................................................................................................................................................................... 22 3 9 0.11 1 1 0 0 0 0
.............TGCTTGAGATAGGGAGAGA........................................................................................................................................................................................................................... 19 2 14 0.07 1 1 0 0 0 0
............ATGTTTGAGGTATGGAGGGA........................................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0
.......................................................AGAGAGAGAGAGTGACAG.................................................................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6328:388264-388514 - dmo_457 ACTC----GCATTACACACAAACTCTATCCCTCCCTC----TCTTTCTGTCA--CTCTCTCTCTCTC--TCTCTCTCTCACTGTCTC----------------TTGCT-------------------------------------------------------------------------------------CTCTTTGTGTCTTTTTC----ACTCTTTCGCTGCCATG-CTGG-CGTACATTTTGTGTGTGT---GTGTGTGT----------------------------------------------------------------------GTT----------------------TTCGTTTGATAATTTGTTG------GCAACAATCA-------------------------------------------------------------------------A-------------------------------TA------ACATTACT-------------------------TGCATTACTTGCAG------------------AG---------CAACAGCAACAGGAA-CA------------------------G---------GAAC------AACAACAACAGCAGCAGCAGCAGCAG
droVir3 scaffold_12928:4238002-4238252 + dvi_8869 GCTC----GC---GCCGCATAGCACTG-AT----CTC----TATTTCCTTCT--CTCTCTCTC--------TCTCTCTCTCTCTCTC----------------TCTCT-------------------------------------------------------------------------------------TTGTGTCTGTTTCACTC----TAACGCTGTCATGCTGG------CGTACATTTTATGTGTGT---GTGTTTTTT--------------------------------------------------------------------------TTTTTGCACATAACGGG--------------CTCAACAAGCAGCTGCAAATATTA-A-------------------------------------------------------------------------------------------------------TA------A--------------------------AAACTATGCGTTAATTGCAG------------------AGCGACGACAACAACAGCAGCAGCCG-CA------------------------G---------CAGC------CGCAGCAGCCGCAGCAGCCGCAGCAG
droGri2 scaffold_14853:961188-961415 + CGCA----TC---ACACAGAAACTCCCTACATATCTC----TCTCTCTCTCT--CTCTCACTCTCTCTCTAACTCTCTGTTTATCTC----------------TTACT-------------------------------------------------------------------------------------CTGTGTG----TCTCTT----TCTCTTTCGCTGCCGTA----------CATTTTGTGTGTG-----TTTTTTTT----TG-------------------------------------------------------------------------GCACATAACGGGCTTCGTAT-------TTAAGTG------GCAACTACTA-A-------------------------------------------------------------------------------------------------------TA------A--------------------------CAATTATGCATTAATTGCAG------------------AGC-------------------------A------------------------A---------CAAC------AACAACAGCAGCAGCAACAGCAGCAG
droWil2 scf2_1100000004577:538080-538321 - TCTC----TT---CCTCTCTTCCTCTCTCCCTCCCTC----TCTCTCTCTCT--TTCTCTCTCTC----TC--TCTCTCTCTCTCTC--------------TCTCTCT-----------------------------------------------------------------------------------CTGTCTATACATCCTTTTT----TATCTTTCTC-----TGTCC--TCCAGTAATTGTAATTTCT---GT-TGTTTAAAAATT------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------ATGGCCATCAATGGAAAGTGAA-TGAGACCCCAGAGCTGAAGCC--------------------------AGA-------------------------------------------GGAGA----AATACTGCAAAACCAA-CT------------------------G---------AAG-------GAGAGCCTCAGAGGCAGCAGCAGCAG
dp5 XR_group6:7363778-7364005 - ATCC----T------TTTAT--------------CTC----TCTCTCGCTCT--CTCTCTCTTTG------------------TA----------------------T-------------------------------------------------------------------------------------CTGTGTCTGTGTCTGTC------------TCTCCT------------------------------------------TTT------GGCCAGTTTTCCAGCTGCACCTGGCACCATCGTGGCTTTATCTTTCAGGGTTTTTTTGTT----------------------GTTGTTGCAAGGACAACAGGCGGCAGCAGGTA-------------------------------------------------------------------------------------G-----------------------------------------------------------------TATTGCTTGCCA------------------CACAACAGCAACAGCAACGGCAACAA-CA------------------------A---------CAAC------AACAACGAAAGCAGCAGCAGCTGGAG
droPer2 scaffold_26:328759-328973 - TCTC----TC---TTTCTCT--------------CTC----TCTCTCTCTCT--CTCTCTCTCTC----TCTCTCTCTCCCTCTCTC----------------TCTCT-------------------------------------------------------------------------------------ATCTCTCTCTATCTCTC----TGTCTGTCTCCGGCTAACCT---C-----------------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------------------------------------------------------------------ATTGCGTTTGCCACATTTTAACA---ACT---TCACCCACATTCAAAATTCGTTT---------------------TGGCTTTG--GCCC---CAGCGA------CAACGACAACAACAA-CG------------------------A---------GAAC------AGCAACAACAACAACGACAGCAACAA
droAna3 scaffold_13117:3452983-3453251 + CTT-----TC---TATCTCT--------------CTC----TCTCTCTGTCTGTTTCTTTCTATC--------TCTATCTCTCTCTA----------------TGA-T--------------------------------------------------------------------GTGTGTGTTCTCTCTCTATCTATCTATCTCTCTT--------TCTCTCTCCCTTGTCT---CCCAAAATTATTGTTTATTGTATATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCAACTGCACCGCAGCAACA---GTC---------GCA---------------------------------------------GTCG---CAGCAGCAA------CAGCAACAGCAG-CA------------GCA---------ACAGCAATCGCAGCTAGTAGGGCAGCAGCAGCAGCAGCAGCAACAA
droBip1 scf7180000395529:19666-19892 - CCCT----AC------------------------CCCCCTCTCTCTCTACT--------------------------------------------------------------------------GACACCCACACA---TACGTGGGAAATTTTCATTTTCATTTTCATTTTGTGCT---------------TTTGGTT----TCATTTTTTTTTTCGTTGTTATTTGTG-------------TTGTTGTT---------------------------------------------------------------------------------------------GGTGTGTGGCAGGTT-TT------------C-------------------AT-GAAAATATTTTGCATT-------------------------------------T-------GCAGCATCCGGC------------GCGACTAAAATAAAG---------------------------------------------------------------------------------------AAACAGCAACAACAA-CA------------------------G---------CAAC------AACAACAGCAACAACAACAGCGACAG
droKik1 scf7180000299277:115303-115522 - CCCA----TC---CCGGACA--------------CGC----TCTCTCTCTCT--TTCTCTTTGC---------------------------------------------------------------------------------------------------------------ACTGTCTGTTCTCTTCCTATCGCTCCATGTTTCC-----TTTTGCTCTCTTTTGCACCC---T--------------------------------TTA-------GC---------------------------------------------------------------CGAGCTG-----------------------G-------------ACAAGCA-------------------------------------------------------------------------T--GAAAAGGAGCTGCATCCGCTGGACAAGCTG----------------------AAGATCGCCTC---------------------GAGCCATT--ATCT---CAACAA------CAACAACAGTAGCTG-CA------------------------T---------CAAC------AACAACAATAACAACAACAGCAGCAG
droFic1 scf7180000453882:297805-298055 + TTTA----TC---TCTCTGT--------------CTC----TCTCTCTGTCT--CTCTCTCTATT----TCTCAATCTCTCTATCTT----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGCTGCAACAGCAGCACCGCAACA---GCA---------ACA------------------------------------------------G---CAGCAGCAA------CAGTTGCAG----------TTACAGCAGCAACAGCAGCAG---------CAGC------AGCAACAACAGCAGCAGCAGCAGCAG
droEle1 scf7180000491023:222716-222931 + TTTA----TC---TCTCTGT--------------CTC----TTTCTCTGTCT--TTCTCTCTTTC------TCCCTATCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCGACAGCAGCACCGCA---------------------------------------------------------------------------------------GCAGCAGCAACAA-TC------------------------G---------CAGC------AACAGTTGCAGTTACAGCAGCAACAG
droRho1 scf7180000779985:139790-139992 - TTTA----TC---TCTCTGT--------------CTC------TCTCTGTCT--TTCTCTCTATC--------TCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCAACAGCAGCACCGCA------------------------------------------------------------------------------------------------GCAG-CT------------------------A---------CAGC------AACAGCAGCAGCTATCGCAGCAGCAG
droBia1 scf7180000298389:113024-113234 + TTTA----TC---TCTCTGT--------------CTC----TCTCTCTGTCT--TTCTCTCTATC--------TCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCAACTGCAACGCCGCA------------------------------------------------------------------------------------------GCAGCAGCAA-CA------------------------G---------CAAC------AGCAGCAGGTGTCGCAGCAGCAGCAG
droTak1 scf7180000414425:215374-215625 + C--------------TCTGT--------------CTC------TCTCTGTCT--TTCTCTCTATC------TCTCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCAACTGCAGCACCGCAACA---GCA---------GCA---------------------------------------------ATCG---CAGCAGCAA------CAGCAGCAGCAG-CAGCTATCGCAGCAGCAACAGCAACAG---------CAGC------AGCAGCTACAACAGCAACAGCAGCAG
droEug1 scf7180000409110:928909-929128 + TTTA----TC---TCTCTGT--------------CTC----TCTTTCTGTCT--TTCTTTCTATCTC--TCTCTCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAGATCAACGGCAGCGGAGTTGCAACTGCAGCACCGCA---------------------------------------------------------------------------------------ACAGCAACAGCAG-CA------------------------G---------CTAT------CGCAGCAGCAGCAGCAACAGCAACAG
dm3 chrU:8366544-8366796 - TTTC----TC---TTTCCCTTACTCTTTCTCTTTCTC----TTTTTCTTTC----------------------TCTTTCTCTTTCTC----------------TTTCT-------------------------------------------------------------------------------------CTTTCTCTTTCTCTTTC----TCTTTCTCTTTCTC-TTTCT---CTTTCTCTTTCTCTTTCT---CTTTCTCTTTCTATTTCTGTGAACGA-------------GTGAACTGGCAACATGTCG-----AGCCCGT--AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACTA----------------------GGTTTTTCCTA---------------------TAGAAATTTATAGCAAGTCA---------CAGTAAAATCTTGAACCC------------------------A---------GAAC------AACAACAACAACAGCAGCTGGATCA-
droSim2 x:11898675-11898859 + TTTA----TC---TCTCTGT--------------CTC----TCTCTCTGTCT--TTCTCTCTATC----TATCTCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGAATCTCTC----TATCTCTCTCTCCCATGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAGATCAACGGCAGCGGAGTTGCAACTGCAGCACCG----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAGCAGCAG
droSec2 scaffold_21:296860-297113 + TTTA----TC---TCTCTGT--------------CTC----TCTCTCTGTCT--TTCTCTCTATC----TATCTCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGAATCTCTC----TATCTCTCTCTCCCATGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAGATCAACGGCAGCGGAGTTGCAACTGCAGCACCGCAGCAACAGTT------GCAGCA----------------------------GTCA--------------------CAGCAACAA------CAGCAGCAGCAG-CT---------------ACAGCAGCAA---------CAGC------AGCAGCAACAACAGCAGCAGCAGCAA
droYak3 X:16507984-16508207 - TTTC----CG---TC--------------------TT----TTTTTTTATCA--CTCTGCGACTT------TGTCACTGTGTGTCTC----------------TGTGT-------------------------------------------------------------------------------------GTGTGTGTG--TGGCTT----TG-----CTCTTGGGAATC------------------------------------------------------------------GTGGCGTCACCATGGCG-----TATGCGT--AAT----ATTTTGTTTTGTAATTATATG--------------CGCGGCGAGCAAACGAAAAT----------------------------------------------------------------------------------------------------------------------------------------TTGTGTTTA----ATTAATTAATTGAAG------------------CG---------CAGCAGCACCAACAG-CA------------------------G---------CAGC------AACAGCAACAGCAGCAGCAGCAGCAG
droEre2 scaffold_4690:1261167-1261430 + ATTTTCATTC---GCTCTGT--CTCT--------CTC----ACTCTCTCTCT--CTCTCTCTCTC----TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCAGCCTGCTAAGAGCAGCAAAGATTAGCTGGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAGGTTTTTCATTCCAGCTTTTGTGGCTGCTGCTGATGTCCTGCGACATTTTCGCCATGCTCCACTCAACA-------AGTTCCATTTGCAGCCC--------------------------------------------------------------------------------------------CACCAACAACAA-TA------------------------C---------CAAC------GACAGCAACAGCAGCAACAAAAACAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACTC----GCATTACACACAAACTCTATCCCTCCCTC----TCTTTCTGTCA--CTCTCTCTCTCTC--TCTCTCTCTCACTGTCTC----------------TTGCT-------------------------------------------------------------------------------------CTCTTTGTGTCTTTTTC----ACTCTTTCGCTGCCATG-CTGG-CGTACATTTTGTGTGTGT---GTGTGTGT----------------------------------------------------------------------GTT----------------------TTCGTTTGATAATTTGTTG------GCAACAATCA-------------------------------------------------------------------------A-------------------------------TA------ACATTACT-------------------------TGCATTACTTGCAG------------------AG---------CAACAGCAACAGGAA-CA------------------------G---------GAAC------AACAACAACAGCAGCAGCAGCAGCAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CA------------------------G---------GAAC------AACAACAACAGCAGCAG.........2520.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGGAA-CA------------------------G---------GA..................................1920.501100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------AACAACAACAGCAGCAGCAGCAGCA.27200.102000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAC------AACAACAACAGCAGC...........19200.051000010
droVir3
GCTC----GC---GCCGCATAGCACTG-AT----CTC----TATTTCCTTCT--CTCTCTCTC--------TCTCTCTCTCTCTCTC----------------TCTCT-------------------------------------------------------------------------------------TTGTGTCTGTTTCACTC----TAACGCTGTCATGCTGG------CGTACATTTTATGTGTGT---GTGTTTTTT--------------------------------------------------------------------------TTTTTGCACATAACGGG--------------CTCAACAAGCAGCTGCAAATATTA-A-------------------------------------------------------------------------------------------------------TA------A--------------------------AAACTATGCGTTAATTGCAG------------------AGCGACGACAACAACAGCAGCAGCCG-CA------------------------G---------CAGC------CGCAGCAGCCGCAGCAGCCGCAGCAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCG-CA------------------------G---------CAGC------CGCAGCAGCCGCAGC...........2730.331001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------CGCAGCAGCCGCAGCAGCCGCAGC..2730.331001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCAGCCGCAGCAGCCGCAGC..2440.251001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-CA------------------------G---------CAGC------CGCAGCAGCCGCAGC...........2440.251001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCCG-CA------------------------G---------CAGC------CGCAGCA...................2590.111001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCCG-CA------------------------..............................................19100.101000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCCG-CA------------------------..............................................20100.101001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCCG-CA------------------------..............................................18110.091001000000000000000000000000000000000000000000000000000000000000
...............................................................................TCTCTCTC----------------TCTCT-------------------------------------------------------------------------------------TTGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.081000000000000000000000000000000000000000000000000000000000000010
............................................................................CTCTCTCTCTC----------------TCTCT-------------------------------------------------------------------------------------TTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCCGCAGCAGCCGCAG...21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------CGCAGCAGCCGCAGCA..........20200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCCGCAGCAGCCGCA....21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCCG-CA------------------------G---------CA..................................20200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCG-CA------------------------G---------CAGC------CGCAGCAGC.................23200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCAGCAGCCGCAGCAG21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------CGCAGCAGCCGCAGCAG.........21200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------CGCAGCAGCCGCAGCAGC........21200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCG-CA------------------------G---------CAGC------CGCAGCAG..................21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCCG-CA------------------------G---------C...................................19200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCCG-CA------------------------G---------CAGC------CGCAG.....................21200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCCG-CA------------------------G---------CAGC------CGCA......................21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------G---------CAGC------CGCAGCAGCCGCAG............21200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------CAGC------CGCAGCAGCCGCAGCAGC........23200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CA------------------------G---------CAGC------CGCAGCAGCCGCA.............21200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCG-CA------------------------G---------CAGC------CGCAGCAGC.................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................TTCT--CTCTCTCTC--------TCTCTCTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCCG-CA------------------------G---------CAGC------..........................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCG-CA------------------------G---------CAGC------CGCAGCA...................20200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCAGCAGCCGCAGCA.20200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
CGCA----TC---ACACAGAAACTCCCTACATATCTC----TCTCTCTCTCT--CTCTCACTCTCTCTCTAACTCTCTGTTTATCTC----------------TTACT-------------------------------------------------------------------------------------CTGTGTG----TCTCTT----TCTCTTTCGCTGCCGTA----------CATTTTGTGTGTG-----TTTTTTTT----TG-------------------------------------------------------------------------GCACATAACGGGCTTCGTAT-------TTAAGTG------GCAACTACTA-A-------------------------------------------------------------------------------------------------------TA------A--------------------------CAATTATGCATTAATTGCAG------------------AGC-------------------------A------------------------A---------CAAC------AACAACAGCAGCAGCAACAGCAGCAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TCTC----TT---CCTCTCTTCCTCTCTCCCTCCCTC----TCTCTCTCTCT--TTCTCTCTCTC----TC--TCTCTCTCTCTCTC--------------TCTCTCT-----------------------------------------------------------------------------------CTGTCTATACATCCTTTTT----TATCTTTCTC-----TGTCC--TCCAGTAATTGTAATTTCT---GT-TGTTTAAAAATT------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------ATGGCCATCAATGGAAAGTGAA-TGAGACCCCAGAGCTGAAGCC--------------------------AGA-------------------------------------------GGAGA----AATACTGCAAAACCAA-CT------------------------G---------AAG-------GAGAGCCTCAGAGGCAGCAGCAGCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
ATCC----T------TTTAT--------------CTC----TCTCTCGCTCT--CTCTCTCTTTG------------------TA----------------------T-------------------------------------------------------------------------------------CTGTGTCTGTGTCTGTC------------TCTCCT------------------------------------------TTT------GGCCAGTTTTCCAGCTGCACCTGGCACCATCGTGGCTTTATCTTTCAGGGTTTTTTTGTT----------------------GTTGTTGCAAGGACAACAGGCGGCAGCAGGTA-------------------------------------------------------------------------------------G-----------------------------------------------------------------TATTGCTTGCCA------------------CACAACAGCAACAGCAACGGCAACAA-CA------------------------A---------CAAC------AACAACGAAAGCAGCAGCAGCTGGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TCTC----TC---TTTCTCT--------------CTC----TCTCTCTCTCT--CTCTCTCTCTC----TCTCTCTCTCCCTCTCTC----------------TCTCT-------------------------------------------------------------------------------------ATCTCTCTCTATCTCTC----TGTCTGTCTCCGGCTAACCT---C-----------------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------------------------------------------------------------------ATTGCGTTTGCCACATTTTAACA---ACT---TCACCCACATTCAAAATTCGTTT---------------------TGGCTTTG--GCCC---CAGCGA------CAACGACAACAACAA-CG------------------------A---------GAAC------AGCAACAACAACAACGACAGCAACAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CTT-----TC---TATCTCT--------------CTC----TCTCTCTGTCTGTTTCTTTCTATC--------TCTATCTCTCTCTA----------------TGA-T--------------------------------------------------------------------GTGTGTGTTCTCTCTCTATCTATCTATCTCTCTT--------TCTCTCTCCCTTGTCT---CCCAAAATTATTGTTTATTGTATATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCAACTGCACCGCAGCAACA---GTC---------GCA---------------------------------------------GTCG---CAGCAGCAA------CAGCAACAGCAG-CA------------GCA---------ACAGCAATCGCAGCTAGTAGGGCAGCAGCAGCAGCAGCAGCAACAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGGCAGCAGCAGCAGCAGCAGC.....2511.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGTAGGGCAGCAGCAGCAGC...........2311.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------GCA---------------------------------------------GTCG---CAGCAGCAA------C....................................................................................1840.251010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG-CA------------GCA---------ACAGCAAT......................................2250.201000001
CTT-----TC---TATCTCT--------------CTC----TCTCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCA....19200.102200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAAC..21200.102020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGCAGCAGCAGCAGCAGCA....23110.091100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA------CAGCAACAGCAG-CA------------GCA---------ACAGC.........................................26140.071010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGCAGCAGCAGCAGCAG......21150.071100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAGCAACAGCAG-CA------------GCA---------ACAGC.........................................24200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG-CA------------GCA---------ACAGC.........................................21200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGCAACAGCAG-CA------------GC........................................................21200.051000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGC.....20200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA------CAGCAACAGCAG-CA------------GCA---------AC............................................26200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAACAA20200.051000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAACA.21200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG-CA------------GCA---------ACAG..........................................20200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGCAACA.23200.051000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAG-CA------------GCA---------ACAGC.........................................20200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA------CAGCAACAGCAG-CA------------GCA---------..............................................24200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG-CA------------GCA---------ACAGCA........................................20200.051001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAGCAACAGCAG-CA------------GCA---------AC............................................20200.051010000
droBip1
CCCT----AC------------------------CCCCCTCTCTCTCTACT--------------------------------------------------------------------------GACACCCACACA---TACGTGGGAAATTTTCATTTTCATTTTCATTTTGTGCT---------------TTTGGTT----TCATTTTTTTTTTCGTTGTTATTTGTG-------------TTGTTGTT---------------------------------------------------------------------------------------------GGTGTGTGGCAGGTT-TT------------C-------------------AT-GAAAATATTTTGCATT-------------------------------------T-------GCAGCATCCGGC------------GCGACTAAAATAAAG---------------------------------------------------------------------------------------AAACAGCAACAACAA-CA------------------------G---------CAAC------AACAACAGCAACAACAACAGCGACAGSizeHit CountTotal NormTotal
No Reads
droKik1
CCCA----TC---CCGGACA--------------CGC----TCTCTCTCTCT--TTCTCTTTGC---------------------------------------------------------------------------------------------------------------ACTGTCTGTTCTCTTCCTATCGCTCCATGTTTCC-----TTTTGCTCTCTTTTGCACCC---T--------------------------------TTA-------GC---------------------------------------------------------------CGAGCTG-----------------------G-------------ACAAGCA-------------------------------------------------------------------------T--GAAAAGGAGCTGCATCCGCTGGACAAGCTG----------------------AAGATCGCCTC---------------------GAGCCATT--ATCT---CAACAA------CAACAACAGTAGCTG-CA------------------------T---------CAAC------AACAACAATAACAACAACAGCAGCAGSizeHit CountTotal NormTotal
No Reads
droFic1
TTTA----TC---TCTCTGT--------------CTC----TCTCTCTGTCT--CTCTCTCTATT----TCTCAATCTCTCTATCTT----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGCTGCAACAGCAGCACCGCAACA---GCA---------ACA------------------------------------------------G---CAGCAGCAA------CAGTTGCAG----------TTACAGCAGCAACAGCAGCAG---------CAGC------AGCAACAACAGCAGCAGCAGCAGCAGSizeHit CountTotal NormTotal
No Reads
droEle1
TTTA----TC---TCTCTGT--------------CTC----TTTCTCTGTCT--TTCTCTCTTTC------TCCCTATCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCGACAGCAGCACCGCA---------------------------------------------------------------------------------------GCAGCAGCAACAA-TC------------------------G---------CAGC------AACAGTTGCAGTTACAGCAGCAACAGSizeHit CountTotal NormTotal
No Reads
droRho1
TTTA----TC---TCTCTGT--------------CTC------TCTCTGTCT--TTCTCTCTATC--------TCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCAACAGCAGCACCGCA------------------------------------------------------------------------------------------------GCAG-CT------------------------A---------CAGC------AACAGCAGCAGCTATCGCAGCAGCAGSizeHit CountTotal NormTotal
No Reads
droBia1
TTTA----TC---TCTCTGT--------------CTC----TCTCTCTGTCT--TTCTCTCTATC--------TCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCAACTGCAACGCCGCA------------------------------------------------------------------------------------------GCAGCAGCAA-CA------------------------G---------CAAC------AGCAGCAGGTGTCGCAGCAGCAGCAGSizeHit CountTotal NormTotal
No Reads
droTak1
C--------------TCTGT--------------CTC------TCTCTGTCT--TTCTCTCTATC------TCTCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGATCAACGGCAGCGGAGTTGCAACTGCAGCACCGCAACA---GCA---------GCA---------------------------------------------ATCG---CAGCAGCAA------CAGCAGCAGCAG-CAGCTATCGCAGCAGCAACAGCAACAG---------CAGC------AGCAGCTACAACAGCAACAGCAGCAGSizeHit CountTotal NormTotal
No Reads
droEug1
TTTA----TC---TCTCTGT--------------CTC----TCTTTCTGTCT--TTCTTTCTATCTC--TCTCTCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGTATCTCTC----TATCTCTCTCTCCCGTGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAGATCAACGGCAGCGGAGTTGCAACTGCAGCACCGCA---------------------------------------------------------------------------------------ACAGCAACAGCAG-CA------------------------G---------CTAT------CGCAGCAGCAGCAGCAACAGCAACAGSizeHit CountTotal NormTotal
No Reads
dm3
TTTC----TC---TTTCCCTTACTCTTTCTCTTTCTC----TTTTTCTTTC----------------------TCTTTCTCTTTCTC----------------TTTCT-------------------------------------------------------------------------------------CTTTCTCTTTCTCTTTC----TCTTTCTCTTTCTC-TTTCT---CTTTCTCTTTCTCTTTCT---CTTTCTCTTTCTATTTCTGTGAACGA-------------GTGAACTGGCAACATGTCG-----AGCCCGT--AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACTA----------------------GGTTTTTCCTA---------------------TAGAAATTTATAGCAAGTCA---------CAGTAAAATCTTGAACCC------------------------A---------GAAC------AACAACAACAACAGCAGCTGGATCA-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................CTGTGAACGA-------------GTGAACTGGC..............................................................................................................................................................................................................................................................................................................................................................................20201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATTTCTGTGAACGA-------------GTGAACTGGCA.............................................................................................................................................................................................................................................................................................................................................................................25200.901800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001600000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................TTTCTC----TTTTTCTTTC----------------------TCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTCTGTGAACGA-------------GTGAACTGGCAACA..........................................................................................................................................................................................................................................................................................................................................................................27200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TATTTCTGTGAACGA-------------GTGA....................................................................................................................................................................................................................................................................................................................................................................................19200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTCTGTGAACGA-------------GTGAAC..................................................................................................................................................................................................................................................................................................................................................................................19200.2040000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATTTCTGTGAACGA-------------GTGAACT.................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TC----TTTTTCTTTC----------------------TCTTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCTGGAT...21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000
...............................................................................................................................................................................................................................................................................TTTCTGTGAACGA-------------GTGAAA..................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GTGAACTGGCAACATGTCG-----................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TATTTCTGTGAACGA-------------GTGAA...................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AACGA-------------GTGAACTGGCAACATGT.......................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AACGA-------------GTGAACTGGCAACATGTCG-----................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTCTGTGAACGA-------------GTGAAC..................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCTGGA....20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATTTCTGTGAACGA-------------GTGAA...................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------CAGTAAAATCTTGAACCC------------------------A---------GA..................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TCTGTGAACGA-------------GTGAACTGGCAACATG........................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CGA-------------GTGAACTGGCAACATGTCG-----................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TGAACTGGCAACATGTCG-----AGC.............................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CTGTGAACGA-------------GTGAACTGGCA.............................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------AACAACAACAACAGCA..........18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AACGA-------------GTGAACTGGCAACATG........................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TCTGTGAACGA-------------GTGAACTGGCC.............................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TGAACTGGCAACATGTCG-----AT..............................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GA-------------GTGAACTGGCAACATGTCG-----................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA----------------------GGTTTTTCCTA---------------------TAGAAATT.............................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTCTGTGAACGA-------------GTGAACTGG...............................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTGAACGA-------------GTGAACTGGCAAC...........................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCTGG.....19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................CG-----AGCCCGT--AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACTA----------------------GGTT.................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GAACGA-------------GTGAACTGGCAACATGTCG-----AGC.............................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTCTGTGAACGA-------------GTGAACTTT...............................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TCG-----AGCCCGT--AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACTA----------------------GG...................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................TTCTGTGAACGA-------------GTGAACTGGC..............................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ACGA-------------GTGAACTGGCAACATGTCG-----................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGTGAACGA-------------GTGAACTGGCAACA..........................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTTA----TC---TCTCTGT--------------CTC----TCTCTCTGTCT--TTCTCTCTATC----TATCTCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGAATCTCTC----TATCTCTCTCTCCCATGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAGATCAACGGCAGCGGAGTTGCAACTGCAGCACCG----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAGCAGCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGGCAGCGGAGTTGCAACTGCAGCA..................................................................................................................................................................................2911.00100000010000000000
droSec2
TTTA----TC---TCTCTGT--------------CTC----TCTCTCTGTCT--TTCTCTCTATC----TATCTCTCTCTCTATCTC----------------TGACT-------------------------------------------------------------------------------------ATGTGTGTGAATCTCTC----TATCTCTCTCTCCCATGTCT---CCCACAATTATTGTTTAT---GTATATTTTGCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAGATCAACGGCAGCGGAGTTGCAACTGCAGCACCGCAGCAACAGTT------GCAGCA----------------------------GTCA--------------------CAGCAACAA------CAGCAGCAGCAG-CT---------------ACAGCAGCAA---------CAGC------AGCAGCAACAACAGCAGCAGCAGCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGCAG...21200.1530003
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAA---------CAGC------AGCAGCAACA................24200.1530030
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAA---------CAGC------AGCAGCA...................21200.1020020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCA.18200.1020020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---------CAGC------AGCAGCAACAA...............20200.1020020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAG......18200.1020020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAGC..19200.1020020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAA------CAGCAGCAGCAG-........................................................................21200.1020200
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAA---------CAGC------AGCAGCAACAA...............25200.0511000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAG...20200.0510010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAA---------CAGC------AGCAGC....................20200.0510010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------CAGCAGCAGCAG-C.......................................................................18200.0510010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAGCAGCA.......19200.0510010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCAGC..20200.0510001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAA---------CAGC------AGCA......................18200.0510001
droYak3
TTTC----CG---TC--------------------TT----TTTTTTTATCA--CTCTGCGACTT------TGTCACTGTGTGTCTC----------------TGTGT-------------------------------------------------------------------------------------GTGTGTGTG--TGGCTT----TG-----CTCTTGGGAATC------------------------------------------------------------------GTGGCGTCACCATGGCG-----TATGCGT--AAT----ATTTTGTTTTGTAATTATATG--------------CGCGGCGAGCAAACGAAAAT----------------------------------------------------------------------------------------------------------------------------------------TTGTGTTTA----ATTAATTAATTGAAG------------------CG---------CAGCAGCACCAACAG-CA------------------------G---------CAGC------AACAGCAACAGCAGCAGCAGCAGCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAGCAGCAGCAGCAG26200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CA------------------------G---------CAGC------AACAGCAACAGCAGCAGCA.......27200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAGCAGCAGCAGCA.24200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AACAGCAACAGCAGCAGCAGCAGCA.27200.05101000000000
droEre2
ATTTTCATTC---GCTCTGT--CTCT--------CTC----ACTCTCTCTCT--CTCTCTCTCTC----TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCAGCCTGCTAAGAGCAGCAAAGATTAGCTGGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAGGTTTTTCATTCCAGCTTTTGTGGCTGCTGCTGATGTCCTGCGACATTTTCGCCATGCTCCACTCAACA-------AGTTCCATTTGCAGCCC--------------------------------------------------------------------------------------------CACCAACAACAA-TA------------------------C---------CAAC------GACAGCAACAGCAGCAACAAAAACATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/17/2015 at 10:20 PM