ID:

dmo_456

 Coordinate:

scaffold_6327:94316-94383 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.7 -7.9

Flybase annnotation

CDS [Dmoj\GI14536-cds]; CDS [Dmoj\GI14536-cds]; exon [dmoj_GLEANR_15223:2]; exon [dmoj_GLEANR_15223:1]; intron [Dmoj\GI14536-in]

Repeatable elements

NameClassFamilyStrand
OSVALDO_I-intLTRGypsy+
mature
  1. scaffold_55:2373-2395 +
  2. scaffold_245:300-322 +
  3. scaffold_532:1653-1675 +
  4. scaffold_1698:5432-5454 +
  5. scaffold_2573:5366-5388 +
  6. scaffold_3025:18958-18980 +
  7. scaffold_3189:3544-3566 +
  8. scaffold_3966:7806-7828 +
  9. scaffold_4094:2818-2840 +
  10. scaffold_4234:16921-16943 +
  11. scaffold_5281:10-32 +
  12. scaffold_6100:32475-32497 +
  13. scaffold_6327:91556-91578 +
  14. dmo_456  scaffold_6327:94333-94355 +
  15. scaffold_6348:1563-1585 +
  16. scaffold_6496:26591547-26591569 +
  17. scaffold_6496:26593949-26593971 +
  18. scaffold_6500:30375648-30375670 -
  19. scaffold_6540:85415-85437 +
  20. scaffold_6541:552228-552250 +
star
  1. scaffold_55:2404-2423 +
  2. scaffold_245:331-350 +
  3. scaffold_413:6020-6039 +
  4. scaffold_2573:5397-5416 +
  5. scaffold_3025:18989-19008 +
  6. scaffold_3189:3575-3594 +
  7. scaffold_3306:2950-2969 +
  8. scaffold_6100:11238-11257 +
  9. scaffold_6100:32506-32525 +
  10. scaffold_6103:31891-31910 +
  11. scaffold_6294:4703-4722 +
  12. scaffold_6327:91587-91606 +
  13. dmo_456  scaffold_6327:94364-94383 +
  14. scaffold_6348:1594-1613 +
  15. scaffold_6473:16930779-16930798 +
  16. scaffold_6496:26591578-26591597 +
  17. scaffold_6496:26593980-26593999 +
  18. scaffold_6501:73120-73139 +
  19. scaffold_6540:85446-85465 +
  20. scaffold_6541:552259-552278 +

Sense Strand Reads

##################################################--------------------------------------------------------------------##################################################
CCATGGACGACGCTGAAGGCGATGTGGAGTATCGCCGCATGGAGGATGAGGTGAAGCCTTCTCCTGCGCCAAGGACAGGCGCAACCGGAGCAAGGACACACATCCCGAATCCAGCCAGGGCATGTCGAGTGTAAAGAACAGTCAGCGATGCGGCGAAGCTCTCTGGCG
*******************************************************************.....((............(((....((........))....)))..))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
 V041
embryo
 V049
head
..................................................................................................CACATCCCGAATCCAGCCAGGGC............................................... 23 0 20 14.00 280 150 129 1 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGC............................................................................................................... 24 0 20 3.60 72 48 15 6 1 2 0
..................................................................................................CACATCCCGAATCCAGCCAGGGCA.............................................. 24 0 20 3.55 71 71 0 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGCC.............................................................................................................. 25 0 20 3.20 64 44 16 4 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAG................................................................................................................ 23 0 20 0.95 19 19 0 0 0 0 0
...................................................................................................ACATCCCGAATCCAGCCAGGGCA.............................................. 23 0 20 0.90 18 18 0 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAGG................................................. 21 0 20 0.55 11 11 0 0 0 0 0
.....................................................................................................................................TAGAACAGACAGCGTTGCGGCG............. 22 3 2 0.50 1 0 0 0 1 0 0
..................................................................................................CACATCCCGAATCCAGCCAGGG................................................ 22 0 20 0.40 8 0 7 0 0 1 0
..................................CCGCATGGAGGATGAGGTGAAGCC.............................................................................................................. 24 0 20 0.35 7 7 0 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAGGAC............................................... 23 1 20 0.20 4 0 4 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAA................................................................................................................. 22 0 20 0.20 4 4 0 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGA.................................................................................................................. 21 0 20 0.20 4 0 1 0 0 3 0
..................................................................................................CACTTCCCGAATCCAGCCAGGGC............................................... 23 1 20 0.20 4 0 4 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGCCT............................................................................................................. 26 0 20 0.15 3 3 0 0 0 0 0
.......CGACGCTGAAGGCGATGTGGAGT.......................................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0
..................................................................................................CACATCCAGAATCCAGCCAGGGC............................................... 23 1 20 0.15 3 0 3 0 0 0 0
.................................GCCGCATGGAGGATGAGGTG................................................................................................................... 20 0 20 0.15 3 3 0 0 0 0 0
.................................GCCGCATGGAGGATGAGG..................................................................................................................... 18 0 20 0.15 3 0 3 0 0 0 0
...................................................................GCCAAGGACAGGCGCAACCGGAG.............................................................................. 23 0 20 0.15 3 3 0 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAGGGCATGT........................................... 27 0 9 0.11 1 1 0 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAGGGCATGTCG......................................... 29 0 9 0.11 1 1 0 0 0 0 0
..............................................................................................GATCCACATCCCGAATCCAGCCAGGGC............................................... 27 2 20 0.10 2 0 2 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAGGGCAT............................................. 25 0 20 0.10 2 0 2 0 0 0 0
.......................................................................................................CCCGAATCCAGCCAGGGCATGTCGA........................................ 25 0 10 0.10 1 1 0 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAGGGCATG............................................ 26 0 20 0.10 2 0 2 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGCCTTC........................................................................................................... 28 0 20 0.10 2 1 0 1 0 0 0
...................................................................GCCAAGGACAGGCGCAACCGGAGC............................................................................. 24 0 20 0.10 2 1 0 0 0 1 0
...................................................................GCCAAGGACAGGCGCAACCGGAGCAAG.......................................................................... 27 0 20 0.10 2 2 0 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGCCTT............................................................................................................ 27 0 20 0.10 2 2 0 0 0 0 0
...................................................................................................ACATCCCGAATCCAGCCAGGGCATG............................................ 25 0 20 0.10 2 0 2 0 0 0 0
....................................................................................................CATCCCGAATCCAGCCAGGGCAT............................................. 23 0 20 0.10 2 2 0 0 0 0 0
..................................CCGCATGGAGGATGAGGTGAAGC............................................................................................................... 23 0 20 0.10 2 1 1 0 0 0 0
..............................................................................................GCTGCACATCCCGAATCCAGCCAGGGC............................................... 27 3 20 0.05 1 1 0 0 0 0 0
.....................................................................................................ATCCCGAATCCAGCCAGGG................................................ 19 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAGGGCATC............................................ 26 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................CACATCCCGAAACCAGCCAGGGC............................................... 23 1 20 0.05 1 1 0 0 0 0 0
...................................................................GCCAAGGACAGGCGCAACCGGAGCA............................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................CAAATCCCGAATCCAGCCAGGGCAT............................................. 25 1 20 0.05 1 0 1 0 0 0 0
.....................................CATGGAGGATGAGGTGAAGCCT............................................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................TACATCCCGAATCCAGCCAGGG................................................ 22 1 20 0.05 1 0 1 0 0 0 0
........................TGGAGTATCGCCGCATGGAGGATGAGG..................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.................................GCCGCATGGAGGATGAGA..................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0 0
....................................GCATGGAGGATGAGGTGAAGCCTTC........................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.............................................................TCCTGCGCCAAGGACAGGCGCAACCGG................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
................................................................TGCGCCAAGGACAGGCGCAACCGGAG.............................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................GAGCAAGGACACACATCCCGA............................................................ 21 0 20 0.05 1 1 0 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGCCC............................................................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................TGCCCGAATCCAGCCAGGGCAT............................................. 22 2 20 0.05 1 0 1 0 0 0 0
................................CGCCGCATGGAGGATGAGGTGAAGCC.............................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................CAAATCCCGAATCCAGCCAGTA................................................ 22 3 20 0.05 1 0 1 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAGGGCATA............................................ 26 1 20 0.05 1 0 1 0 0 0 0
.................................GCCGCATGGAGAATGAGGTGAAGCCTTC........................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
....................................................................CCAAGGACAGGCGCAACCGGA............................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................ACATCCCGAATCCAGCCAGGGCT.............................................. 23 1 20 0.05 1 1 0 0 0 0 0
..................................CCGCATGGAGGATGAGGTGAAG................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................ACATCCCGAATCCAGCCAGGGC............................................... 22 0 20 0.05 1 0 1 0 0 0 0
.....................................CATGGAGGATGAGGTGAAGCC.............................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0
..................GCGATGTGGAGTATCGCCGCATGGAG............................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
.................................GCAGCATGGAGGATGAGGTGAAGCC.............................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
....................................GCATGGAGGATGAGGTGAA................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
.........................GGAGTATCGCCGCATGGAGG........................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
..........................................................................ACAGGCGCAACCGGAGCAAGGC........................................................................ 22 1 20 0.05 1 1 0 0 0 0 0
..................GCGATGTGGAGTATCGCCGCA................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGAC.............................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
.................................GCCGCATTGAGGATGAGGTGAAGCCT............................................................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................CACATCCCGAAGCCAGCCAGGGCA.............................................. 24 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................CACATCCCGAATCCCGCCAGGGC............................................... 23 1 20 0.05 1 0 1 0 0 0 0
.......CGACGCTGAAGGCGATGTGGAGTAA........................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................ACACATCCCGAATCCAGCCAGGG................................................ 23 0 20 0.05 1 1 0 0 0 0 0
..........................................................TTCTCCTGCGCCAAGGACAGGCG....................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGCA.............................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................CATCACATCCCGAATCCAGCCAGGGCA.............................................. 27 3 20 0.05 1 1 0 0 0 0 0
..................................................................................................CACATCCCGAATCGAGCCAGGGC............................................... 23 1 20 0.05 1 0 1 0 0 0 0
.......CGACGCTGAAGGCGATGTGGAGC.......................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
...................CGATGTGGAGTATCGCCGCA................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
.................................GCCGCATGGAGGATGAGGTGAAGCT.............................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.............................................................TCCTGCGCCAAGGACAGGCGCAACC.................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................ATCCCGAATCCAGCCAGGGC............................................... 20 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................ACACATCCCGAATCCAGCCAGGGCAT............................................. 26 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................CACATCCACAATCCAGCCAGGGC............................................... 23 2 20 0.05 1 0 1 0 0 0 0
............................................................................................................................TCGGGTGTAAAGAACTAT.......................... 18 3 20 0.05 1 0 0 0 0 0 1
.................................GCCGCATGGAGGATGAGGTGAAT................................................................................................................ 23 1 20 0.05 1 0 0 0 1 0 0
..................................................................CGCCAAGGACAGGCGCAACCGG................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................CACATCCCGAATCCAGCCAG.................................................. 20 0 20 0.05 1 0 0 1 0 0 0
.................................GCCTCATGGAGGATGAGGTGAAGCC.............................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

GGTACCTGCTGCGACTTCCGCTACACCTCATAGCGGCGTACCTCCTACTCCACTTCGGAAGAGGACGCGGTTCCTGTCCGCGTTGGCCTCGTTCCTGTGTGTAGGGCTTAGGTCGGTCCCGTACAGCTCACATTTCTTGTCAGTCGCTACGCCGCTTCGAGAGACCGC
**************************************************.....((............(((....((........))....)))..))..******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
 V049
head
....................................................................................GGCCTCGTTCCTGTGTGTAGGGCT............................................................ 24 0 20 45.05 901 895 0 6 0 0 0
..................................................................................TTGGCCTCGTTCCTGTGTGTAGGGCT............................................................ 26 0 20 10.55 211 172 38 1 0 0 0
...................GCTACACCTCATAGCGGCGTACCT............................................................................................................................. 24 0 20 6.05 121 121 0 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGTAGGGC............................................................. 23 0 20 5.50 110 110 0 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGTAGGGCTT........................................................... 25 0 20 2.80 56 56 0 0 0 0 0
......................................................................................................AGGGCTTAGGTCGGTCCCGTACAGCT........................................ 26 0 10 2.10 21 15 6 0 0 0 0
....................CTACACCTCATAGCGGCGTACCT............................................................................................................................. 23 0 20 1.10 22 0 22 0 0 0 0
..............................................................................................................GGTCGGTCCCGTACAGCTCACAT................................... 23 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................CAGGTCGGTCCCGTACAGCTCACAT................................... 25 1 1 1.00 1 0 1 0 0 0 0
...................................................................................CGGCCTCGTTCCTGTGTGTAGGGCT............................................................ 25 1 20 0.65 13 13 0 0 0 0 0
.........................................................................................CGTTCCTGTGTGTAGGGCT............................................................ 19 0 20 0.65 13 0 10 0 3 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGGGCTT........................................................... 26 0 20 0.60 12 0 12 0 0 0 0
................ACCGCTACACCTCATAGCGGCGTACCT............................................................................................................................. 27 1 20 0.50 10 1 9 0 0 0 0
.......................................................................................................GGGCTTAGGTCGGTCCCGTACAGCT........................................ 25 0 10 0.40 4 3 1 0 0 0 0
....................................................................................AGCCTCGTTCCTGTGTGTAGGGCT............................................................ 24 1 20 0.40 8 7 0 1 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGTAGGCCT............................................................ 24 1 20 0.40 8 0 8 0 0 0 0
....................................................................................CGCCTCGTTCCTGTGTGTAGGGCT............................................................ 24 1 20 0.35 7 1 6 0 0 0 0
....................................................................................................GTAGGGCTTAGGTCGGTCCCGTACAGCT........................................ 28 0 9 0.33 3 3 0 0 0 0 0
.....................................................................................................TAGGGCTTAGGTCGGTCCCGTACAGCT........................................ 27 0 9 0.33 3 3 0 0 0 0 0
.....................................................TTCGGAAGAGGACGCGGTTCCTGT........................................................................................... 24 0 20 0.30 6 4 2 0 0 0 0
........................................................................................TCGTTCCTGTGTGTAGGGCT............................................................ 20 0 20 0.30 6 0 6 0 0 0 0
................................................................................................GTGTGTAGGGCTTAGGTCGGTCCCGT.............................................. 26 0 20 0.30 6 4 0 0 2 0 0
.....................................................................................TCCTCGTTCCTGTGTGTAGGGCT............................................................ 23 1 20 0.25 5 0 5 0 0 0 0
.................CCGCTACACCTCATAGCGGCGTA................................................................................................................................ 23 0 20 0.25 5 0 5 0 0 0 0
.........................................................................................CGTTCCTGTGTGTAGGGCTTAGGT....................................................... 24 0 20 0.25 5 0 5 0 0 0 0
.................CCGCTACACCTCATAGCGGCGTAACT............................................................................................................................. 26 1 20 0.25 5 0 5 0 0 0 0
......................................................................................CCTCGTTCCTGTGTGTAGGGCG............................................................ 22 1 20 0.20 4 0 4 0 0 0 0
..................CGCTACACCTCATAGCGGCGTA................................................................................................................................ 22 0 20 0.20 4 0 4 0 0 0 0
...................................................................................TGGCCTCCTTCCTGTGTGTAGGGCT............................................................ 25 1 20 0.15 3 3 0 0 0 0 0
...................................................................................TGGCCTCGTTACTGTGTGTAGGGCT............................................................ 25 1 20 0.15 3 0 3 0 0 0 0
.....................................................................................GCCTCGTTCCTGTGTGTAGTGCT............................................................ 23 1 20 0.15 3 0 3 0 0 0 0
..................CGCTACACCTCATAGCGGCCTACCT............................................................................................................................. 25 1 20 0.15 3 0 3 0 0 0 0
...............TTCCGCTACACCTCATAGCGGCGTACCT............................................................................................................................. 28 0 20 0.15 3 3 0 0 0 0 0
......................................................................................CCTCGTTCCTGTGTGTAGTGCT............................................................ 22 1 20 0.15 3 0 3 0 0 0 0
.................................................................................TTTGGCCTCGTTCCTGTGTGTAGGGCT............................................................ 27 1 20 0.15 3 0 3 0 0 0 0
......................................................................................CCTCGTTCCTGTGTGTAGGGCGT........................................................... 23 1 20 0.15 3 0 3 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGGAGGGCT............................................................ 25 1 20 0.15 3 0 3 0 0 0 0
.................................................................................GTTGGCCTCGTTCCTGTGTGTAGGGC............................................................. 26 0 20 0.15 3 3 0 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGGGCC............................................................ 25 1 20 0.15 3 0 3 0 0 0 0
...................................................ACTTCGGAAGAGGACGCGGTTCCTGT........................................................................................... 26 0 20 0.15 3 1 2 0 0 0 0
..................................................................................................................................GATTTCTTGTCTGTCGCAAC.................. 20 3 9 0.11 1 0 0 0 0 1 0
.................................................CCACTTCGGAAGAGGACGCGGTTCCT............................................................................................. 26 0 20 0.10 2 0 2 0 0 0 0
..................CGCTACACCTCATAGCGGCGTACCTCTAG......................................................................................................................... 29 3 20 0.10 2 0 2 0 0 0 0
........................................................................................................GGCTTAGGTCGGTCCCGTACAGCT........................................ 24 0 10 0.10 1 1 0 0 0 0 0
..................................................................................ATGGCCTCGTTCCTGTGTGTAGGGC............................................................. 25 1 20 0.10 2 2 0 0 0 0 0
.................................................................................ATTGGCCTCGTTCCTGTGTGTAGGGCT............................................................ 27 1 20 0.10 2 2 0 0 0 0 0
........................................................................................TCGTTCCTGTGTGTAGGGCTTAGTT....................................................... 25 1 20 0.10 2 0 2 0 0 0 0
...................................................................................CGGCCTCGTTCCTGTGTGTAGGCCT............................................................ 25 2 20 0.10 2 0 2 0 0 0 0
...............................................................................................TGTGTGTAGGGCTTAGGTCGGTCCCGT.............................................. 27 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................CAGGGCTTAGGTCGGTCCCGTACAGCT........................................ 27 1 10 0.10 1 0 1 0 0 0 0
.....................................................................................GCCTCGTTCCTGTGTGTAGGGCT............................................................ 23 0 20 0.10 2 0 0 0 2 0 0
....................................................................................GGCCTCGTTCCTGTGTGTAGGGCTC........................................................... 25 1 20 0.10 2 1 1 0 0 0 0
.................CAGCTACACCTCATAGCGGCGTACCT............................................................................................................................. 26 1 20 0.10 2 0 2 0 0 0 0
..................CGCTACACCTCATAGCGGCGTACCGC............................................................................................................................ 26 1 20 0.10 2 0 2 0 0 0 0
......................................................................................TCTCGTTCCTGTGTGTAGGGCT............................................................ 22 1 20 0.10 2 0 2 0 0 0 0
................CCCGCTACACCTCATAGCGGCGTACCT............................................................................................................................. 27 1 20 0.10 2 2 0 0 0 0 0
..................CACTACACCTCATAGCGGCGTACCT............................................................................................................................. 25 1 20 0.10 2 0 2 0 0 0 0
.........TGCGACTTCCGCTACACCTCATAGC...................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0 0
......................................................................................CCTCGTTCCTGTGTGTAGGGCC............................................................ 22 1 20 0.10 2 0 2 0 0 0 0
.......................................................CGGAAGAGGACGCGGTTCCTGT........................................................................................... 22 0 20 0.10 2 0 2 0 0 0 0
...............................................CTCCACTTCGGAAGAGGACGCGGTT................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0
...................................................................................GGGCCTCGTTCCTGTGTGTAGGGCT............................................................ 25 1 20 0.10 2 2 0 0 0 0 0
.......................................................................................................GGGCTTAGGTCGGTCCCGTACAGC......................................... 24 0 10 0.10 1 1 0 0 0 0 0
............................................................................................................TAGGTCGGTCCCGTACAGCT........................................ 20 0 13 0.08 1 1 0 0 0 0 0
............................................................................................................TAGGTCGGTCCCGTACAGCTCACA.................................... 24 0 13 0.08 1 1 0 0 0 0 0
............................................................................................................TAGGTCGGTCCCGTACAG.......................................... 18 0 13 0.08 1 1 0 0 0 0 0
.........................................................................................................GCTTAGGATGGTCCCGGACA........................................... 20 3 14 0.07 1 0 0 0 0 0 1
..TACCTGCTGCGACTTCCGCTACACCT............................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
.......GCTGCGACTTCCGCTACACCTCATAGCG..................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
..................CGCTACACCTCATAACGGCGTACCT............................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
...........................................CCTACTCCACTTCGGAAGAGGAC...................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................TGTGTAGGGCTTAGGTCGGTCCCGT.............................................. 25 0 20 0.05 1 0 0 1 0 0 0
................................................................................CGTTGGCCTCGTTTCTGTGTGTA................................................................. 23 1 20 0.05 1 0 1 0 0 0 0
....................CTACACCTCATAGCGGCTTACCT............................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGTAGGGCA............................................................ 24 1 20 0.05 1 1 0 0 0 0 0
...................................................................................TGGCCTCGTTCCTGAGTGTAGGGCT............................................................ 25 1 20 0.05 1 0 1 0 0 0 0
.................................................................................CTTGGCCTCGTTCCTGTGTGTAGGGCT............................................................ 27 1 20 0.05 1 1 0 0 0 0 0
.................CCGCTACACCTCATAGCGGCGTATCGC............................................................................................................................ 27 2 20 0.05 1 0 1 0 0 0 0
................................................................................CGTTGGCCTCGTTCCTGTGTGTAGG............................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.....................................................TTCGGAAGAGGACGCGGTTCCTGTC.......................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGTAGGGCTG........................................................... 25 1 20 0.05 1 1 0 0 0 0 0
................TCCGCTACACCTCATAGCGGCGTACCTA............................................................................................................................ 28 1 20 0.05 1 1 0 0 0 0 0
.................................................CCACTTCGGAAGAGGACGCGGTTCCCGT........................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................GCCTCGTTCCTGTGTGTAGGGCTC........................................................... 24 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................TCCTCGTTCCTGTGTGTAGGGCTT........................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.................................................CCACTTCGGAAGAGGACGCGGTTCTTGT........................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
....................................................................................CGACTCGTTCCTGTGTGTAGGGCT............................................................ 24 2 20 0.05 1 0 1 0 0 0 0
.......................................................................................CTCGTTCCTGTGTGTAGGGCTTAGTT....................................................... 26 1 20 0.05 1 0 1 0 0 0 0
....................CTACACCTCAAAGCGGCGTACCTCCT.......................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGTAGGGCTTG.......................................................... 26 1 20 0.05 1 1 0 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGGGAT............................................................ 25 1 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTGGTTCCTGTGTGTAGGGCT............................................................ 24 1 20 0.05 1 1 0 0 0 0 0
......................................................................................CCTCGTTCCTGTGTGTAGGACT............................................................ 22 1 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGCGTAGTGCT............................................................ 24 2 20 0.05 1 0 1 0 0 0 0
.................ATGCTACACCTCAAAGCGGCGTACCT............................................................................................................................. 26 3 20 0.05 1 1 0 0 0 0 0
....................................................................................GGCCTCGTTCCTGCGCGGAGGGCT............................................................ 24 3 20 0.05 1 0 1 0 0 0 0
...................................................................................TGGCCTCGTTCCTTTGTGTAGGGCT............................................................ 25 1 20 0.05 1 0 1 0 0 0 0
................................................................................................CTGTGTAGGGCTTAGGTCGGTCCCGT.............................................. 26 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................GTTCCTGTGTGTAGGGCTTAGTT....................................................... 23 1 20 0.05 1 0 1 0 0 0 0
...........................................CCTACTCTACTTCGGAAGAGGAC...................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
..................................................................................TTTGCCTCGTTCCTGTGTGTAGGGCTT........................................................... 27 1 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTCGTTCCTGCGTGTAGGGCT............................................................ 24 1 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTAGTTCCTGTGTGTAGGGCT............................................................ 24 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................GGGTTTAGGTCGGTCCCGTACTGCT........................................ 25 2 20 0.05 1 0 1 0 0 0 0
..................................................CACTTCGGAAGAGGACGCGGTTCCTGTC.......................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................CTCTCGTTCCTGTCTGTAGGGCT............................................................ 23 3 20 0.05 1 1 0 0 0 0 0
.........................................................................................CGTTCCTGTGTGTAGGGCTTAGGTC...................................................... 25 0 20 0.05 1 1 0 0 0 0 0
....................................................TTTCGGAAGAGGACGCGGTTCCTGT........................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...ACCTGCTGCGACTTCCGCTACACCT............................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................GCCTCGTTCCTGTGTGTAGGGCA............................................................ 23 1 20 0.05 1 1 0 0 0 0 0
.GTACCTGCTGCGACTTCCGCTACACCT............................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
........................ACCTCATAGCGGCGTACCTCCTACT....................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGAGTAGGGCT............................................................ 24 1 20 0.05 1 0 1 0 0 0 0
....................CTAGACCTCATAGCGGCGCACCT............................................................................................................................. 23 2 20 0.05 1 0 0 0 1 0 0
.........................CCTCATAGCGGCGTACCTCCTACT....................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
..................................................................................CTGGCCTCGTGCCTGTGTGTAGGGCT............................................................ 26 2 20 0.05 1 0 1 0 0 0 0
.......................................................................................................GGGCTTAGGTCGGTCCCGTA............................................. 20 0 20 0.05 1 1 0 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGCAGGGCT............................................................ 24 1 20 0.05 1 0 1 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGGGCG............................................................ 25 1 20 0.05 1 0 1 0 0 0 0
...................................................................................CGGCCTCGTTCCTGTGTGTAGGGCTC........................................................... 26 2 20 0.05 1 1 0 0 0 0 0
.....................................................................................ACCTCGTTCCTGTGTGTAGGGCT............................................................ 23 1 20 0.05 1 1 0 0 0 0 0
.................................................CCACTTCGGAAGACGACGCGGT................................................................................................. 22 1 20 0.05 1 0 1 0 0 0 0
........................CCCCCCTAGCGGCGTACCT............................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0
.......................................................................................CTCGTTCCTGTGTGTAGGCCT............................................................ 21 1 20 0.05 1 0 1 0 0 0 0
.............................................................................CCGCGTTGGCCTCGTTCCTGTGTGTC................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
...............TTCCGCTACACCTCATAGCGGCGTACC.............................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGGGGT............................................................ 25 1 20 0.05 1 1 0 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTATAGGGCT............................................................ 25 1 20 0.05 1 0 0 0 1 0 0
...................................................................................CGGCCTCGTTCCTGTGTGTAGGGCGT........................................................... 26 2 20 0.05 1 0 1 0 0 0 0
.......................................................................TCCTGTCCGCGTTGGCCTCGTTACT........................................................................ 25 1 20 0.05 1 0 1 0 0 0 0
..................................................................................TTGGCCTCGTTCCTGTGTGTAGGACT............................................................ 26 1 20 0.05 1 1 0 0 0 0 0
....................CTACACCTCATAGCGGCGTACCTCC........................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTTTAGGGCT............................................................ 24 1 20 0.05 1 0 1 0 0 0 0
GGTACCTGCTGCGACTTCCG.................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
.........................CCTCATAGCGGCGTAACTCCTACT....................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGTAGGGCC............................................................ 24 1 20 0.05 1 0 1 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGT.................................................................. 19 0 20 0.05 1 0 0 0 1 0 0
...............................................................................AAATTGGCCTCGTTCCTGTGTGTAGGGCT............................................................ 29 3 20 0.05 1 0 1 0 0 0 0
..................................................................................TTGGCCTCGTTCCTGCGTGTAGGCCT............................................................ 26 2 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTCGTTCCCGTGTGTAGGGCTT........................................................... 25 1 20 0.05 1 1 0 0 0 0 0
......................................................................................CCTCGTTTCTGTGTGTAGGGCT............................................................ 22 1 20 0.05 1 0 1 0 0 0 0
...................................................................................TGGCCTCGTTCATGTGTGTAGGGCT............................................................ 25 1 20 0.05 1 0 1 0 0 0 0
......CGCTGCGACTTCCGCTACACCTCATA........................................................................................................................................ 26 1 20 0.05 1 0 1 0 0 0 0
...................................................................................TTGCCTCGTTCCTGTGTGTAGGGCT............................................................ 25 1 20 0.05 1 1 0 0 0 0 0
....................................................................................GGCCTCGTTCCTGGGTGTAGGGCTT........................................................... 25 1 20 0.05 1 1 0 0 0 0 0
..................GTCTACACCTCCTAGCGGCGTA................................................................................................................................ 22 3 20 0.05 1 0 1 0 0 0 0
.......GCTGCGACTTCCGCTACACCTCATA........................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................CGTTCCTGTGCGTAGGGCTTAGGT....................................................... 24 1 20 0.05 1 1 0 0 0 0 0
...........................TCATAGCGGCGTACCTCCTACTTCAC................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
...................................................................................TGTCCTCGTTCCTGTGTGTAGGGCT............................................................ 25 1 20 0.05 1 0 1 0 0 0 0
..................................................................................TTGGCCTCGTTCCTGTGTGGAGGGCT............................................................ 26 1 20 0.05 1 0 1 0 0 0 0
......................................................................................CCTCGTTCCTGTGTGTAGGGCTG........................................................... 23 1 20 0.05 1 1 0 0 0 0 0
..............................................ACTCCACTTCGGAAGAGGACGCGGTT................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
......................................................................................CCTCGTTCCTGTGTGTAGGGCTTTGGT....................................................... 27 1 20 0.05 1 0 1 0 0 0 0
............................CATAGCGGCGTACCTCCTACTCCACTTC................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0
.................................................CCACTTCGGAAGAGGACTCGGTTCCTGT........................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
...................................................................................GGGCCTCGTTACTCTGTGTAGGGCT............................................................ 25 3 20 0.05 1 0 1 0 0 0 0
......................................................................................GCTCGTTCCTGTGTGTAGGGGT............................................................ 22 2 20 0.05 1 0 1 0 0 0 0
....................................................................................GGCCTCGTTCCGGTGCGTAGGGC............................................................. 23 2 20 0.05 1 1 0 0 0 0 0
.....................................................................................GCCTCGTTCCTGTGTTTAGGGCT............................................................ 23 1 20 0.05 1 1 0 0 0 0 0
.................................................TCACTTCGGAAGAGGACGCGGTTCCTGT........................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGTGCTC........................................................... 26 2 20 0.05 1 0 1 0 0 0 0
..................................................................................TTGGAATCGTTCCTGTGTGTAGGG.............................................................. 24 2 20 0.05 1 1 0 0 0 0 0
.......................CACCTCATAGCGGCGTACCT............................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
....................................................................................GGCCTCGTGCCTGTGTGTAGGGCT............................................................ 24 1 20 0.05 1 1 0 0 0 0 0
.................CCGCTACACCTCATAGCGGCGTACCTC............................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
........................................................................CCTGTCCGCGTTGGCCTCGTTCCTGT...................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.......GCTGCGACTTCCGCTACACCTCATAG....................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.................CCGCTACACCTCATAGCGGCGTACCTGAA.......................................................................................................................... 29 3 20 0.05 1 1 0 0 0 0 0
..................CGCTACACCTCATAGCGGCGCAC............................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
.................CCGCTACACCTCATAGCGGCGTTCCT............................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
.............................................................................CCGCGTTGGCCTCGTTCCTGTGTGTAGG............................................................... 28 0 20 0.05 1 1 0 0 0 0 0
...................................................................................TGGCCTCTTTCCTGTGTGTAGGGCT............................................................ 25 1 20 0.05 1 1 0 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGGGCTG........................................................... 26 1 20 0.05 1 1 0 0 0 0 0
....................................................................................GGCCTCGTTCCTGTGTGTCGGGCT............................................................ 24 1 20 0.05 1 1 0 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGGAGGGGT............................................................ 25 2 20 0.05 1 0 1 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGGGCTGTGC........................................................ 29 3 20 0.05 1 1 0 0 0 0 0
..................................................................................TTGGCCTCGTGCCTGTGTGTAGGGCT............................................................ 26 1 20 0.05 1 0 1 0 0 0 0
...................................................................................CAGCCTCGTTCCTGTGTGTGGGGCT............................................................ 25 3 20 0.05 1 0 1 0 0 0 0
.......................AACCTCATAGCGGCGTACCTCCTACT....................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.........................................................GAAGAGGACGCGGTTCCTGTCCGCG...................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..............................................................GGACGCGGTTCCTGTCCGCGTTGGCC................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
....................................................................................AGCCTCGTTCCTGTGTGTAGGGCTT........................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.................CCGATACACCTCATAGCGGCGTACCT............................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................GCCTCGTTCCTGTGTGTGGGGCT............................................................ 23 1 20 0.05 1 0 1 0 0 0 0
..................CGCTACACCTCATAGCGGCGTACCT............................................................................................................................. 25 0 20 0.05 1 0 0 1 0 0 0
..................CGCTACACCTCATAGCGGCCTAACT............................................................................................................................. 25 2 20 0.05 1 0 1 0 0 0 0
..................CGCTACACCTCATAGCGGCGTACCTATA.......................................................................................................................... 28 3 20 0.05 1 0 1 0 0 0 0
..................CGCTACACCTCATAGCGGCGGACCTC............................................................................................................................ 26 1 20 0.05 1 0 1 0 0 0 0
..................CGCTACACCTCATAGCGGCGTACCTTA........................................................................................................................... 27 2 20 0.05 1 0 1 0 0 0 0
...................................................................................TGGACTCGTTCCTGTGTGTAGTGCT............................................................ 25 2 20 0.05 1 0 1 0 0 0 0
...................................................................................TGGCCTCGTTCCTGTGTGTAGGGCTGA.......................................................... 27 1 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6327:94266-94433 + dmo_456 CCATGGACG--ACGCT--G-AAGGCGATGTGGAGT------------ATCG---CCGCATGGAGGATGAGGTG---AAGCCTTCTCCTGCGCCAAGGACAGGCGCAACCGGAGCAAGGACACACATCCCGAATCCAGCCAGGGCATGTCGAGTGTAAAGAACAGTCAGCGATGCGGCGAAG-CTCTCTGG----------------------------------------------------------------------------------------------------------CG
droVir3 scaffold_12855:9974176-9974221 - ATGTTG---------------------TGTATC----------------------------------------------------------------------------------------------------------------------------AGAATAGTCAACGATGTGGAGATG-CACTCTTG----------------------------------------------------------------------------------------------------------CG
droGri2 scaffold_3324:985-1121 + CAATGACGGACAATCA--AAACACATACAACCAGGCG-TATC--------AGGAGCGGACAGAATTCGACACG---AGACCCAGACCTGCCCCGAGGACGAGACGAAACAACATACAAACACAT---------------------------------------ATAAGCAACCCAGCGAGG-GCATGCAG----------------------------------------------------------------------------------------------------------A-
droWil2 scf2_1100000004921:4676855-4676888 + -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATAGCCAACAATGTGGTGCGG-CTCTTTGG----------------------------------------------------------------------------------------------------------CG
dp5 Unknown_group_66:7197-7334 + -------------------------------------------------------------------------------------------------------------------------------------------------------------CAT---GTCGACGATGCAAAGACGGCCCGCTGGAGGATGCAGCACGGGAGGAAAGGGGAGCGCATGGCCGCTTGCCGACACCGACCAACGGCAATATCGAGGACGGATATGTCAAGAATCCGGCCCAGGCGTGCCGAAGGT
droPer2 scaffold_1286:3250-3387 + -------------------------------------------------------------------------------------------------------------------------------------------------------------CAT---GTCGACGATGCAAAGACGGCCCGCTGGAGGAGGCAGCACGGGAGGAAAGGGGAGCGCATGGCCGCTTGCCGACACCGACCAACGGCAATATCGAGGACGGATATGTCAAGAATCCGGCCCAGGCATGCCGAAGGT
droAna3 scaffold_9461:1716-1775 + CCAAAAGAA--GAACGTCA-C----------CAGAAGCCACCGGAGCAACA---GCGCCCCCAGGACAG--------------------------------------------------------------------------------------------------------------------GGTTA----------------------------------------------------------------------------------------------------------AG
droBip1 scf7180000396570:545701-545734 - -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATAGTCAGCGATGTGGCGAGG-CCCTCTGG----------------------------------------------------------------------------------------------------------AG
droKik1 scf7180000302461:645482-645515 - -------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAGCCAGCGATGTGGCGAGG-CCCTGTGG----------------------------------------------------------------------------------------------------------CG
droFic1 scf7180000454044:96195-96297 + CCATGAGAA--GGGAACCA-GCAGTAACGTGCAGGCGCTGTC--------AGGAG---------GAGCCAGACG----------------------------------------------------------------------------------------------------------------------------------------AGCGTAACGCACGGCC----------------------------------CGGATATGTGAACAATCCATCCCAGGCATGT-----CG
droEle1 scf7180000490316:9195-9330 - CCAAGGGCA--GAGCA--G-GGTGCGGTGTGTAGGCGGGGCC--------AGGAG---------GACACGGACGCGACA-------------CAGAGGCATACGCCGCAGG--------------------------------------------------------------------------------------------------------------------------GACAAGACCCACCAG-CCGGTCGCAG-TGAATTCATACAGAATCCAGCCGACGCTTGCCG---GG
droRho1 scf7180000776610:33085-33218 - CCAAGAACA--GACCA--G-GGTGCGGTGTGCAGACGGTGCC--------AGGAG---------GACCCGGACGCACAA-------------CCAAGAAACACGCCGCGCG--------------------------------------------------------------------------------------------------------------------------GCCACGAACCAGCAA-ACAATCGAGG-CGGATACGTAGCGAATCCTACCCAGGCCTGC-----CG
droBia1 scf7180000301786:143515-143548 + -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGTCAACGATGTGGTGAGG-CCCTGTGG----------------------------------------------------------------------------------------------------------CG
droTak1 scf7180000415789:144990-145023 + -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATAGTCAGCGATGCGGTGAGG-CCCTGTGG----------------------------------------------------------------------------------------------------------CG
droEug1 scf7180000409766:166511-166544 - -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGTCAACGATGTGGCGAGG-CCTTGTGG----------------------------------------------------------------------------------------------------------CG
dm3 chr3R:1223623-1223656 - -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGCCAGCGGTGCGGTGAAG-CCCTCTGG----------------------------------------------------------------------------------------------------------CG
droSim2 3r:1122997-1123030 - -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGCCAACGGTGTGGTGAAG-CCCTCTGG----------------------------------------------------------------------------------------------------------CG
droSec2 scaffold_6:1340969-1341002 - -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGCCAACGGTGTGGTGAAG-CCCTCTGG----------------------------------------------------------------------------------------------------------CG
droYak3 3R:1615500-1615533 - -------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGTCAACGGTGTGGTGAAG-CCCTGTGG----------------------------------------------------------------------------------------------------------AG
droEre2 scaffold_4760:122304-122377 + CCAAGAGAG--GAGCA--G-AACGTGGTGTGCAGGAGCTGCC--------TAGAG---------GACACCACG---GGTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGGGTGCGGCGGGGGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCATGGACG--ACGCT--G-AAGGCGATGTGGAGT------------ATCG---CCGCATGGAGGATGAGGTG---AAGCCTTCTCCTGCGCCAAGGACAGGCGCAACCGGAGCAAGGACACACATCCCGAATCCAGCCAGGGCATGTCGAGTGTAAAGAACAGTCAGCGATGCGGCGAAG-CTCTCTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................CACATCCCGAATCCAGCCAGGGC..........................................................................................................................................................232014.002801500001291
..................................................G---CCGCATGGAGGATGAGGTG---AAGC..........................................................................................................................................................................................................................24203.607248201156
.........................................................................................................................CACATCCCGAATCCAGCCAGGGCA.........................................................................................................................................................24203.55717100000
..................................................G---CCGCATGGAGGATGAGGTG---AAGCC.........................................................................................................................................................................................................................25203.206444000164
..................................................G---CCGCATGGAGGATGAGGTG---AAG...........................................................................................................................................................................................................................23200.95191900000
..........................................................................................................................ACATCCCGAATCCAGCCAGGGCA.........................................................................................................................................................23200.90181800000
.........................................................................................................................CACATCCCGAATCCAGCCAGG............................................................................................................................................................21200.55111100000
.........................................................................................................................CACATCCCGAATCCAGCCAGGG...........................................................................................................................................................22200.408010070
......................................................CCGCATGGAGGATGAGGTG---AAGCC.........................................................................................................................................................................................................................24200.357700000
..................................................G---CCGCATGGAGGATGAGGTG---AA............................................................................................................................................................................................................................22200.204400000
..................................................G---CCGCATGGAGGATGAGGTG---A.............................................................................................................................................................................................................................21200.204030010
..................................................G---CCGCATGGAGGATGAGGTG---AAGCCT........................................................................................................................................................................................................................26200.153300000
.......CG--ACGCT--G-AAGGCGATGTGGAGT------------...........................................................................................................................................................................................................................................................23200.153300000
..................................................G---CCGCATGGAGGATGAGGTG---..............................................................................................................................................................................................................................20200.153300000
..................................................G---CCGCATGGAGGATGAGG...................................................................................................................................................................................................................................18200.153000030
..........................................................................................GCCAAGGACAGGCGCAACCGGAG.........................................................................................................................................................................................23200.153300000
.........................................................................................................................CACATCCCGAATCCAGCCAGGGCATGT......................................................................................................................................................2790.111100000
.........................................................................................................................CACATCCCGAATCCAGCCAGGGCATGTCG....................................................................................................................................................2990.111100000
.........................................................................................................................CACATCCCGAATCCAGCCAGGGCAT........................................................................................................................................................25200.102000020
..............................................................................................................................CCCGAATCCAGCCAGGGCATGTCGA...................................................................................................................................................25100.101100000
.........................................................................................................................CACATCCCGAATCCAGCCAGGGCATG.......................................................................................................................................................26200.102000020
..................................................G---CCGCATGGAGGATGAGGTG---AAGCCTTC......................................................................................................................................................................................................................28200.102100001
..........................................................................................GCCAAGGACAGGCGCAACCGGAGC........................................................................................................................................................................................24200.102110000
..........................................................................................GCCAAGGACAGGCGCAACCGGAGCAAG.....................................................................................................................................................................................27200.102200000
..................................................G---CCGCATGGAGGATGAGGTG---AAGCCTT.......................................................................................................................................................................................................................27200.102200000
..........................................................................................................................ACATCCCGAATCCAGCCAGGGCATG.......................................................................................................................................................25200.102000020
...........................................................................................................................CATCCCGAATCCAGCCAGGGCAT........................................................................................................................................................23200.102200000
......................................................CCGCATGGAGGATGAGGTG---AAGC..........................................................................................................................................................................................................................23200.102100010
............................................................................................................................ATCCCGAATCCAGCCAGGG...........................................................................................................................................................19200.051100000
.........................................................................................................................CACATCCCGAATCCAGCCAGGGCATC.......................................................................................................................................................26200.051100000
..........................................................................................GCCAAGGACAGGCGCAACCGGAGCA.......................................................................................................................................................................................25200.051100000
.........................................................CATGGAGGATGAGGTG---AAGCCT........................................................................................................................................................................................................................22200.051000010
.............................TGGAGT------------ATCG---CCGCATGGAGGATGAGG...................................................................................................................................................................................................................................27200.051100000
..................................................G---CCGCATGGAGGATGAGA...................................................................................................................................................................................................................................18200.051100000
........................................................GCATGGAGGATGAGGTG---AAGCCTTC......................................................................................................................................................................................................................25200.051100000
....................................................................................TCCTGCGCCAAGGACAGGCGCAACCGG...........................................................................................................................................................................................27200.051100000
.......................................................................................TGCGCCAAGGACAGGCGCAACCGGAG.........................................................................................................................................................................................26200.051100000
..............................................................................................................GAGCAAGGACACACATCCCGA.......................................................................................................................................................................21200.051100000
..................................................G---CCGCATGGAGGATGAGGTG---AAGCCC........................................................................................................................................................................................................................26200.051000010
.................................................CG---CCGCATGGAGGATGAGGTG---AAGCC.........................................................................................................................................................................................................................26200.051100000
.........................................................................................................................CACATCCCGAATCCAGCCAGGGCATA.......................................................................................................................................................26200.051000010
...........................................................................................CCAAGGACAGGCGCAACCGGA..........................................................................................................................................................................................21200.051100000
..........................................................................................................................ACATCCCGAATCCAGCCAGGGCT.........................................................................................................................................................23200.051100000
......................................................CCGCATGGAGGATGAGGTG---AAG...........................................................................................................................................................................................................................22200.051100000
..........................................................................................................................ACATCCCGAATCCAGCCAGGGC..........................................................................................................................................................22200.051000010
.........................................................CATGGAGGATGAGGTG---AAGCC.........................................................................................................................................................................................................................21200.051000010
.......................GCGATGTGGAGT------------ATCG---CCGCATGGAG..........................................................................................................................................................................................................................................26200.051100000
........................................................GCATGGAGGATGAGGTG---AA............................................................................................................................................................................................................................19200.051100000
..............................GGAGT------------ATCG---CCGCATGGAGG.........................................................................................................................................................................................................................................20200.051100000
.................................................................................................ACAGGCGCAACCGGAGCAAGGC...................................................................................................................................................................................22200.051100000
.......................GCGATGTGGAGT------------ATCG---CCGCA...............................................................................................................................................................................................................................................21200.051100000
.......CG--ACGCT--G-AAGGCGATGTGGAGT------------AA.........................................................................................................................................................................................................................................................25200.051100000
........................................................................................................................ACACATCCCGAATCCAGCCAGGG...........................................................................................................................................................23200.051100000
.................................................................................TTCTCCTGCGCCAAGGACAGGCG..................................................................................................................................................................................................23200.051100000
..................................................G---CCGCATGGAGGATGAGGTG---AAGCA.........................................................................................................................................................................................................................25200.051000010
.......CG--ACGCT--G-AAGGCGATGTGGAGC------------...........................................................................................................................................................................................................................................................23200.051000010
........................CGATGTGGAGT------------ATCG---CCGCA...............................................................................................................................................................................................................................................20200.051100000
..................................................G---CCGCATGGAGGATGAGGTG---AAGCT.........................................................................................................................................................................................................................25200.051100000
....................................................................................TCCTGCGCCAAGGACAGGCGCAACC.............................................................................................................................................................................................25200.051100000
............................................................................................................................ATCCCGAATCCAGCCAGGGC..........................................................................................................................................................20200.051000010
........................................................................................................................ACACATCCCGAATCCAGCCAGGGCAT........................................................................................................................................................26200.051100000
..................................................G---CCGCATGGAGGATGAGGTG---AAT...........................................................................................................................................................................................................................23200.051000100
.........................................................................................CGCCAAGGACAGGCGCAACCGG...........................................................................................................................................................................................22200.051100000
.........................................................................................................................CACATCCCGAATCCAGCCAG.............................................................................................................................................................20200.051000001
droVir3
ATGTTG---------------------TGTATC----------------------------------------------------------------------------------------------------------------------------AGAATAGTCAACGATGTGGAGATG-CACTCTTG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
CAATGACGGACAATCA--AAACACATACAACCAGGCG-TATC--------AGGAGCGGACAGAATTCGACACG---AGACCCAGACCTGCCCCGAGGACGAGACGAAACAACATACAAACACAT---------------------------------------ATAAGCAACCCAGCGAGG-GCATGCAG----------------------------------------------------------------------------------------------------------A-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATAGCCAACAATGTGGTGCGG-CTCTTTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
-------------------------------------------------------------------------------------------------------------------------------------------------------------CAT---GTCGACGATGCAAAGACGGCCCGCTGGAGGATGCAGCACGGGAGGAAAGGGGAGCGCATGGCCGCTTGCCGACACCGACCAACGGCAATATCGAGGACGGATATGTCAAGAATCCGGCCCAGGCGTGCCGAAGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTG.............................................................................................................22811.759409100000300
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGG............................................................................................................2389.757807430000100
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCC................21138.46110081280000100
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGC.................20138.46110010350100100
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGC...............................................................................................................2086.755404910002200
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGG..................19145.868208020000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCC...............22135.697406281100200
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCT..............................................................................................................2185.634504300000200
.......................................................................................................................................................................ACGATGCAAAGACGGCCCG................................................................................................................1985.384304200001000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGG.........................................................................................................21144.215905800100000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGGA...........................................................................................................2482.381901800000100
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGA........................................................................................................22142.293203010100000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGGAG..........................................................................................................2582.001601200000400
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAG..........................................................................................................20141.712402200100100
........................................................................................................................................................................CGATGCAAAGACGGCCCGCTG.............................................................................................................21141.361901700100100
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCA..............23131.311701500000200
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGGC.................19131.231601600000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCC.................................................................................................................1881.0080800000000
...............................................................................................................................................................T---GTCGACGATGCAAAGACGGCCCGC...............................................................................................................2571.0070600000100
.....................................................................................................................................................................CGACGATGCAAAGACGGCCCG................................................................................................................2181.0080600000200
...................................................................................................................................................................................................................................................AACGGCAATATCGAGGAC.....................................1880.8871400000200
........................................................................................................................................................................CGATGCAAAGACGGCCCGCTGG............................................................................................................22140.711001000000000
...........................................................................................................................................................................TGCAAAGACGGCCCGCTGGAGG.........................................................................................................22140.711001000000000
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGGCC................20130.6990900000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGAT.......................................................................................................2330.6720200000000
..............................................................................................................................................................AT---GTCGACGATGCAAAGACGG....................................................................................................................2160.6740100000300
.................................................................................................................................................................................................................................CGCTTGCCGACACCGACCAACGG..................................................2390.5650500000000
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGGCCC...............21130.5470700000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCAGG............25130.5470700000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGA...........................................................................................................19150.5380800000000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGGGAGC................................................................................22150.5380700000100
............................................................................................................................................................................GCAAAGACGGCCCGCTGG............................................................................................................18150.5380800000000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGGGA..................................................................................20150.5380800000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTA.............................................................................................................2280.5040400000000
.....................................................................................................................................................................CGACGATGCAAAGACGGCCCGCT..............................................................................................................2380.5040400000000
.............................................................................................................................................................CAT---GTCGACGATGCAAAGACGG....................................................................................................................2260.5030000000030
.............................................................................................................................................................CAT---GTCGACGATGCAAAGACGGCC..................................................................................................................2460.5030010000200
..................................................................................................................................................................................................TGCAGCACGGGAGGAAAGGGGAGCGC..............................................................................2620.5010100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCAG.............24130.4660600000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCAGGC...........26130.4660600000000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGGGAG.................................................................................21150.4060600000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGGT...........................................................................................................2480.3830300000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGT............................................................................................................2380.3830300000000
......................................................................................................................................................................GACGATGCAAAGACGGCCCGCT..............................................................................................................2280.3830300000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGGAGA.........................................................................................................2680.3830300000000
......................................................................................................................................................................GACGATGCAAAGACGGCCCG................................................................................................................2080.3830300000000
......................................................................................................................................................................GACGATGCAAAGACGGCCCGCTGG............................................................................................................2480.3830300000000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGG....................................................................................18160.3860600000000
.............................................................................................................................................................................CAAAGACGGCCCGCTGGAGGA........................................................................................................21140.3650500000000
........................................................................................................................................................................CGATGCAAAGACGGCCCGCTGGA...........................................................................................................23140.3650500000000
...........................................................................................................................................................................TGCAAAGACGGCCCGCTGGAG..........................................................................................................21140.3650200000300
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGG..................18140.3650500000000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGGGAGCGC..............................................................................24150.3350300002000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGATGC.....................................................................................................2530.3310100000000
....................................................................................................................................................................................................................................................................CGGATATGTCAAGAATCCGGCC................2290.3330300000000
.............................................................................................................................................................................CAAAGACGGCCCGCTGGAGGATG......................................................................................................2330.3310100000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGATG......................................................................................................2430.3310100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCA...............22130.3140400000000
...............................................................................................................................................................T---GTCGACGATGCAAAGACGGC...................................................................................................................2170.2920200000000
...............................................................................................................................................................T---GTCGACGATGCAAAGACGG....................................................................................................................2070.2920200000000
....................................................................................................................................................................TCGACGATGCAAAGACGGCCCGCTG.............................................................................................................2570.2920000000020
...........................................................................................................................................................................TGCAAAGACGGCCCGCTGGAGGA........................................................................................................23140.2940400000000
.....................................................................................................................................................................CGACGATGCAAAGACGGCCCGCTG.............................................................................................................2480.2520200000000
...........................................................................................................................................................................................................................................CACCGACCAACGGCAATATCGAGGAC.....................................2680.2520110000000
..................................................................................................................................................................................................................................................CAACGGCAATATCGAGGAC.....................................1980.2520200000000
.....................................................................................................................................................................CGACGATGCAAAGACGGCCC.................................................................................................................2080.2520100100000
.....................................................................................................................................................................CGACGATGCAAAGACGGCCCGC...............................................................................................................2280.2520100000100
..............................................................................................................................................................................................................GGAAAGGGGAGCGCATGGCCG.......................................................................2180.2520200000000
...................................................................................................................................................................................................................................................AACGGCAATATCGAGGACGGATATG..............................2580.2520100001000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGT...............................................................................................................2080.2520100001000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGGAGG.........................................................................................................2680.2520200000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCAC..............23130.2330210000000
....................................................................................................................................................................................................................................................................CGGATATGTCAAGAATCCGGCCC...............2390.2220200000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGGAAA.........................................................................................................2690.2220200000000
.................................................................................................................................................................................................................................CGCTTGCCGACACCGACCAACG...................................................2290.2220200000000
........................................................................................................................................................................CGATGCAAAGACGGCCCGCTGGAG..........................................................................................................24140.2130300000000
.............................................................................................................................................................................CAAAGACGGCCCGCTGGAGG.........................................................................................................20140.2130300000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCAC................................................................................................................19100.2020200000000
...........................................................................................................................................................................TGCAAAGACGGCCCGCTGGA...........................................................................................................20150.2030300000000
.............................................................................................................................................................CAT---GTCGACGATGCAAAGACGGCCCGC...............................................................................................................2760.1710000000010
.............................................................................................................................................................CAT---GTCGACGATGCAAAGACGGCCCG................................................................................................................2660.1710000000010
.............................................................................................................................................................CAT---GTCGACGATGCAAAGACGGCCC.................................................................................................................2560.1710000000010
.........................................................................................................................................................................................................CGGGAGGAAAGGGGAGCGCATGG..........................................................................23130.1520100000100
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCT...............22130.1520200000000
.........................................................................................................................................................................................................CGGGAGGAAAGGGGAGCGCATG...........................................................................22130.1520200000000
...............................................................................................................................................................................................................................................................GAGGACGGATATGTCAAGAATCCGGCC................2770.1410100000000
........................................................................................................................................................................CGATGCAAAGACGGCCCC................................................................................................................18140.1420200000000
.........................................................................................................................................................................................................................................................................ATGTCAAGAATCCGGCCC...............18140.1420200000000
........................................................................................................................................................................CGATGCAAAGACGGCCCGCTGA............................................................................................................22140.1420200000000
...............................................................................................................................................................T---GTCGACGATGCAAAGACGGCCAC................................................................................................................2470.1410100000000
...................................................................................................................................................................GTCGACGATGCAAAGACGT....................................................................................................................1970.1410100000000
...............................................................................................................................................................T---GTCGACGATGCAAAGACGGCCC.................................................................................................................2370.1410100000000
...............................................................................................................................................................T---GTCGACGATGCAAAGACG.....................................................................................................................1970.1410100000000
...............................................................................................................................................................T---GTCGACGATGCAAAGACGGCCCG................................................................................................................2470.1410100000000
........................................................................................................................................................................CGATGCAAAGACGGCCCG................................................................................................................18140.1420200000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGAAAA.....................................................................................................25140.1420200000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGAC.......................................................................................................23140.1420010100000
....................................................................................................................................................................TCGACGATGCAAAGACGGCCCGCTGGAG..........................................................................................................2870.1410100000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGAA.......................................................................................................23140.1420200000000
...........................................................................................................................................................................TGCAAAGACGGCCCGCTG.............................................................................................................18150.1320200000000
.........................................................................................................................................................................................................CGGGAGGAAAGGGGAGCG...............................................................................18150.1320200000000
......................................................................................................................................................................GACGATGCAAAGACGGCCCGCTGGAG..........................................................................................................2680.1310100000000
......................................................................................................................................................................................................................................................GGCAATATCGAGGACGGATATG..............................2280.1310100000000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGGG...................................................................................19160.1320200000000
..........................................................................................................................................................................................................................................ACACCGACCAACGGCAATATCGAGGAC.....................................2780.1310100000000
......................................................................................................................................................................GACGATGCAAAGACGGCCCGCTG.............................................................................................................2380.1310100000000
.........................................................................................................................................................................................................................................................AATATCGAGGACGGATATGTC............................2180.1310100000000
...............................................................................................................................................................................................................................................GACCAACGGCAATATCGAGGACGG...................................2480.1310100000000
...................................................................................................................................................................................................................................................AACGGCAATATCGAGGACGGA..................................2180.1310100000000
..................................................................................................................................................................................................................................................CAACGGCAATATCGAGGACGGATATG..............................2680.1310100000000
...................................................................................................................................................................................................................................................AACGGCAATATCGAGGACGGAT.................................2280.1310100000000
...............................................................................................................................................................................................................GAAAGGGGAGCGCATGGCCG.......................................................................2080.1310100000000
....................................................................................................................................................................................................................................................ACGGCAATATCGAGGACGGATATGTC............................2680.1310100000000
....................................................................................................................................................................................................................................................ACGGCAATATCGAGGACG....................................1880.1310100000000
......................................................................................................................................................................................................................GAGCGCATGGCCGCTTGCCGACA.............................................................2380.1310100000000
.................................................................................................................................................................................................................................................CCAACGGCAATATCGAGGAC.....................................2080.1310100000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGGAGT.........................................................................................................2680.1310100000000
.....................................................................................................................................................................CGACGATGCAAAGACGGC...................................................................................................................1880.1310100000000
...................................................................................................................................................................................................................................................AACGGCAATATCGAGGACGGATAT...............................2480.1310100000000
...................................................................................................................................................................................................................GGGGAGCGCATGGCCGCTTG...................................................................2080.1310100000000
......................................................................................................................................................................GACGATGCAAAGACGGCCCGT...............................................................................................................2180.1310100000000
..............................................................................................................................................................................................................................................CGACCAACGGCAATATCGAGGACG....................................2480.1310100000000
..............................................................................................................................................................................................................GGAAAGGGGAGCGCATGGCCGCTTG...................................................................2580.1310100000000
.....................................................................................................................................................................................................................................................CGGCAATATCGAGGACGGATATGTC............................2580.1310100000000
......................................................................................................................................................................GACGATGCAAAGACGGCCC.................................................................................................................1980.1310100000000
.......................................................................................................................................................................................................................................................GCAATATCGAGGACGGATATGT.............................2280.1310100000000
...................................................................................................................................................................................................................................................AACGGCAATATCGAGGACGGATA................................2380.1310100000000
......................................................................................................................................................................GACGATGCAAAGACGGCCAA................................................................................................................2080.1310000100000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTC.............................................................................................................2280.1310100000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCC................................................................................................................1980.1310100000000
.......................................................................................................................................................................................................................................CCGACACCGACCAACGGCAATAT............................................23170.1220200000000
.......................................................................................................................................................................................................................................CCGACACCGACCAACGGCAATATCGA.........................................26170.1220000000200
.......................................................................................................................................................................................................................................CCGACACCGACCAACGGCAATATC...........................................24170.1220200000000
.................................................................................................................................................................................................................................CGCTTGCCGACACCGACCAACGGCA................................................2590.1110100000000
.................................................................................................................................................................................................................................CGCTTGCCGACACCGACCAA.....................................................2090.1110100000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCA.................................................................................................................1890.1110100000000
.............................................................................................................................................................................................................................TGGCCGCTTGCCGACACCGACCAAC....................................................2590.1110100000000
....................................................................................................................................................................................................................................................................CGGATATGTCAAGAATCCGGCCCA..............2490.1110100000000
.............................................................................................................................................................................................................................TGGCCGCTTGCCGACACCGACCAACGA..................................................2790.1110100000000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCCA...............................................................................................................2090.1110100000000
.................................................................................................................................................................................................................................CGCTTGCCGACACCGACCAAC....................................................2190.1110100000000
.................................................................................................................................................................................................................................CGCTTGCCGACACCGACCAACGGC.................................................2490.1110100000000
.................................................................................................................................................................................................................................CGCTTGCCGACACCGACCAACGGCAATAA............................................2990.1110100000000
.......................................................................................................................................................................................................................................CCGACACCGACCAACGGCAATATCGAGG.......................................28110.0910100000000
...........................................................................................................................................................................................................................................CACCGACCAACGGCAATATCGAGGT......................................25110.0910100000000
.........................................................................................................................................................................................................CGGGAGGAAAGGGGAGCGCATGGC.........................................................................24110.0910100000000
..............................................................................................................................................................................................................GGAAAGGGGAGCGCATGGC.........................................................................19110.0910100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCAGGCG..........27130.0810100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCC..............23130.0810100000000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGGGAGCGCA.............................................................................25130.0810000010000
........................................................................................................................................................................................................ACGGGAGGAAAGGGGAGCGCAT............................................................................22130.0810100000000
.......................................................................................................................................................................................................................................................................ATATGTCAAGAATCCGGCCC...............20130.0810100000000
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGGCCCC..............22130.0810100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCT..............23130.0810010000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCG...............22130.0810100000000
....................................................................................................................................................................................................................................TTGCCGACACCGACCAACGGCAA...............................................23130.0810100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCT................21130.0810100000000
.......................................................................................................................................................................................................................................................................ATATGTCAAGAATCCGGCC................19130.0810100000000
.......................................................................................................................................................................................................CACGGGAGGAAAGGGGAGCGCATG...........................................................................24130.0810100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCA................21130.0810100000000
...............................................................................................................................................................................AAGACGGCCCGCTGGAGG.........................................................................................................18140.0710100000000
..........................................................................................................................................................................................................................................................................TGTCAAGAATCCGGCCCAGGC...........21140.0710100000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGT........................................................................................................22140.0710000100000
..........................................................................................................................................................................................................................................................................TGTCAAGAATCCGGCCCAGGCGT.........23140.0710100000000
.........................................................................................................................................................................GATGCAAAGACGGCCCGC...............................................................................................................18140.0710100000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGC........................................................................................................22140.0710000001000
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGGTA................20140.0710100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGT..................19140.0710100000000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCG...................18140.0710100000000
..............................................................................................................................................................................AAAGACGGCCCGCTGGAGGA........................................................................................................20140.0710100000000
.........................................................................................................................................................................GATGCAAAGACGGCCCGCT..............................................................................................................19140.0710100000000
.........................................................................................................................................................................GATGCAAAGACGGCCCGCTGG............................................................................................................21140.0710100000000
........................................................................................................................................................................CGATGCAAAGACGGCCCGCTGTT...........................................................................................................23140.0710100000000
..............................................................................................................................................................................AAAGACGGCCCGCTGGAGG.........................................................................................................19140.0710100000000
.............................................................................................................................................................................CAAAGACGGCCCGCTGGAG..........................................................................................................19140.0710100000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGA.........................................................................................................21140.0710000100000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGGAAA......................................................................................................24140.0710100000000
..........................................................................................................................................................................ATGCAAAGACGGCCCGCT..............................................................................................................18140.0710100000000
............................................................................................................................................................................GCAAAGACGGCCCGCTGGAGT.........................................................................................................21140.0710100000000
.......................................................................................................................................................................................................CACGGGAGGAAAGGGGAGC................................................................................19150.0710100000000
.............................................................................................................................................................................CAAAGACGGCCCGCTGGT...........................................................................................................18150.0710100000000
.........................................................................................................................................................................................................CGGGAGGAAAGGGGAGCGC..............................................................................19150.0710000000100
.......................................................................................................................................................................................................CACGGGAGGAAAGGGGAGCGC..............................................................................21150.0710100000000
...................................................................................................................................................................................................GCAGCACGGGAGGAAAGG.....................................................................................18160.0610100000000
.......................................................................................................................................................................................................................................CCGACACCGACCAACGGCAATATCGAG........................................27160.0610100000000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGGGT..................................................................................20160.0610100000000
.......................................................................................................................................................................................................................................CCGACACCGACCAACGGCAATAAA...........................................24170.0610100000000
.....................................................................................................................................................................................................................................TGCCGACACCGACCAACGGCAATA.............................................24170.0610100000000
.......................................................................................................................................................................................................................................CCGACACCGACCAACGGCAATATCG..........................................25170.0610100000000
...........................................................................................................................................................................................................................................CACCGACCAACGGCAATATCGA.........................................22180.0610100000000
droPer2
-------------------------------------------------------------------------------------------------------------------------------------------------------------CAT---GTCGACGATGCAAAGACGGCCCGCTGGAGGAGGCAGCACGGGAGGAAAGGGGAGCGCATGGCCGCTTGCCGACACCGACCAACGGCAATATCGAGGACGGATATGTCAAGAATCCGGCCCAGGCATGCCGAAGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTG.............................................................................................................2270.715040001
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGG............................................................................................................2370.292020000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCC...............22200.153030000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGT............................................................................................................2370.141010000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCG................................................................................................................1970.141001000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCT..............................................................................................................2170.141010000
.......................................................................................................................................................................ACGATGCAAAGACGGCCCGCTGGA...........................................................................................................2470.141010000
........................................................................................................................................................................................CGCTGGAGGAGGCAGCACGG..............................................................................................20190.112020000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGC.................20200.102002000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCC................21200.102020000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCG...................18200.102020000
..............................................................................................................................................................................................................GGAAAGGGGAGCGCATGGCCGCTTGC..................................................................26110.091010000
.............................................................................................................................................................................................................................TGGCCGCTTGCCGACACCGACC.......................................................22110.091010000
.......................................................................................................................................................................................................CACGGGAGGAAAGGGGAGCGCATG...........................................................................24150.071010000
.........................................................................................................................................................................................................CGGGAGGAAAGGGGAGCGCAA............................................................................21150.071010000
.........................................................................................................................................................................................................CGGGAGGAAAGGGGAGCGCATGGCC........................................................................25150.071010000
.........................................................................................................................................................................................................CGGGAGGAAAGGGGAGCGCATG...........................................................................22150.071010000
...........................................................................................................................................................................................................GGAGGAAAGGGGAGCGCATG...........................................................................20150.071010000
................................................................................................................................................................................................GAGGCAGCACGGGAGGAAAGG.....................................................................................21180.061000001
................................................................................................................................................................................................GAGGCAGCACGGGAGGAAAGGGGA..................................................................................24180.061000001
................................................................................................................................................................................................GAGGCAGCACGGGAGGAAAGGG....................................................................................22180.061000001
.............................................................................................................................................................................................GAGGAGGCAGCACGGGAGGAAA.......................................................................................22180.061010000
....................................................................................................................................................................................................CAGCACGGGAGGAAAGGGA...................................................................................19200.051010000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCC..............23200.051010000
........................................................................................................................................................................CGATGCAAAGACGGCCCGCTGG............................................................................................................22200.051010000
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGG..................18200.051010000
...................................................................................................................................................................................................GCAGCACGGGAGGAAAGGGGAGCGC..............................................................................25200.051010000
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGGCC................20200.051010000
..........................................................................................................................................................................ATGCAAAGACGGCCCGCTGG............................................................................................................20200.051010000
......................................................................................................................................................................................................................................................................GATATGTCAAGAATCCGGCA................20200.051010000
.....................................................................................................................................................................................................AGCACGGGAGGAAAGGGGAGC................................................................................21200.051000001
...........................................................................................................................................................................TGCAAAGACGGCCCGCTGGAGGAG.......................................................................................................24200.051010000
...........................................................................................................................................................................TGCAAAGACGGCCCGCTGGAGA.........................................................................................................22200.051010000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCA..............23200.051010000
.......................................................................................................................................................................................................................................CCGACACCGACCAACGGCAATATCG..........................................25200.051010000
........................................................................................................................................................................CGATGCAAAGACGGCCCG................................................................................................................18200.051010000
.....................................................................................................................................................................................................................................................................GGATATGTCAAGAATCCGGCCCAG.............24200.051010000
........................................................................................................................................................................CGATGCAAAGACGGCCCGC...............................................................................................................19200.051010000
...........................................................................................................................................................................TGCAAAGACGGCCCGCTGGAGG.........................................................................................................22200.051010000
......................................................................................................................................................................................................GCACGGGAGGAAAGGGGAGC................................................................................20200.051000001
.....................................................................................................................................................................................GCCCGCTGGAGGAGGCAGCACG...............................................................................................22200.051010000
........................................................................................................................................................................................................................................CGACACCGACCAACGGCAATTGA...........................................23200.051010000
........................................................................................................................................................................CGATGCAAAGACGGCCCGCTGGA...........................................................................................................23200.051010000
droAna3
CCAAAAGAA--GAACGTCA-C----------CAGAAGCCACCGGAGCAACA---GCGCCCCCAGGACAG--------------------------------------------------------------------------------------------------------------------GGTTA----------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATAGTCAGCGATGTGGCGAGG-CCCTCTGG----------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAGCCAGCGATGTGGCGAGG-CCCTGTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droFic1
CCATGAGAA--GGGAACCA-GCAGTAACGTGCAGGCGCTGTC--------AGGAG---------GAGCCAGACG----------------------------------------------------------------------------------------------------------------------------------------AGCGTAACGCACGGCC----------------------------------CGGATATGTGAACAATCCATCCCAGGCATGT-----CGSizeHit CountTotal NormTotal
No Reads
droEle1
CCAAGGGCA--GAGCA--G-GGTGCGGTGTGTAGGCGGGGCC--------AGGAG---------GACACGGACGCGACA-------------CAGAGGCATACGCCGCAGG--------------------------------------------------------------------------------------------------------------------------GACAAGACCCACCAG-CCGGTCGCAG-TGAATTCATACAGAATCCAGCCGACGCTTGCCG---GGSizeHit CountTotal NormTotal
No Reads
droRho1
CCAAGAACA--GACCA--G-GGTGCGGTGTGCAGACGGTGCC--------AGGAG---------GACCCGGACGCACAA-------------CCAAGAAACACGCCGCGCG--------------------------------------------------------------------------------------------------------------------------GCCACGAACCAGCAA-ACAATCGAGG-CGGATACGTAGCGAATCCTACCCAGGCCTGC-----CGSizeHit CountTotal NormTotal
No Reads
droBia1
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGTCAACGATGTGGTGAGG-CCCTGTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATAGTCAGCGATGCGGTGAGG-CCCTGTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droEug1
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGTCAACGATGTGGCGAGG-CCTTGTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
dm3
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGCCAGCGGTGCGGTGAAG-CCCTCTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................ACAGCCAGCGGTGCGGTGAA......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGCCAACGGTGTGGTGAAG-CCCTCTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGCCAACGGTGTGGTGAAG-CCCTCTGG----------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
-------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACAGTCAACGGTGTGGTGAAG-CCCTGTGG----------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CCAAGAGAG--GAGCA--G-AACGTGGTGTGCAGGAGCTGCC--------TAGAG---------GACACCACG---GGTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGGGTGCGGCGGGGGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:23 PM