ID:

dmo_450

 Coordinate:

scaffold_6308:3217082-3217145 +

 Confidence:

confident

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.8 -16.6 -16.0

Flybase annnotation

intron [Dmoj\GI11213-in]; CDS [Dmoj\GI11213-cds]; CDS [Dmoj\GI11213-cds]

No Repeatable elements found

Sense Strand Reads

CCACTGAGCAGGACATTGAAACCCATTTCGGAGCCATTGGCATAATAAAGGCAAGTGAAGACAGCATATGCTTAGCATTGTAAATAACTAATCATTGTTGGTTACCGCTTGCAGAAGGATAAGCGCACCATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGA

**************************************************(((((((..(((((((.(((.((((............)))).))))))).)))..)))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 V041

embryo

 M046

female body

 V110

male body		 V056

head

 V049

head
............................................................................................CATTGTTGGTTACCGCTTGCAGT................................................. 23 1 1 1089.00 1089 655 80 144 131 46 33
............................................................................................CATTGTTGGTTACCGCTTGCAG.................................................. 22 0 1 824.00 824 362 245 87 54 53 23
............................................................................................CATTGTTGGTTACCGCTTGCA................................................... 21 0 1 288.00 288 110 88 42 13 23 12
............................................................................................CATTGTTGGTTACCGCTTGCAGC................................................. 23 1 1 158.00 158 156 0 1 0 0 1
............................................................................................CATTGTTGGTTACCGCTTGC.................................................... 20 0 1 83.00 83 40 10 14 3 12 4
..................................................GCAAGTGAAGACAGCATATGCT............................................................................................ 22 0 1 68.00 68 59 2 4 1 1 1
............................................................................................CGTTGTTGGTTACCGCTTGCAGT................................................. 23 2 1 55.00 55 55 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCCG.................................................. 22 1 1 32.00 32 0 26 0 0 1 5
............................................................................................CGTTGTTGGTTACCGCTTGCAG.................................................. 22 1 1 32.00 32 31 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTCAG.................................................. 22 1 1 32.00 32 0 18 0 0 2 12
............................................................................................CATTGTTGGTTACCGCTTGCAGA................................................. 23 0 1 31.00 31 14 10 2 2 2 1
............................................................................................CATTGTTGGTTACCGCTTG..................................................... 19 0 1 28.00 28 1 1 17 1 2 6
............................................................................................CATTGTTGGTTACCGCTTGCAA.................................................. 22 1 1 26.00 26 19 3 4 0 0 0
.............................................................................................ATTGTTGGTTACCGCTTGCAG.................................................. 21 0 1 22.00 22 2 9 5 0 3 3
............................................................................................CATTGTTGGTTACCGCTTGCAGTT................................................ 24 2 1 21.00 21 13 0 7 0 1 0
.............................................................................................ATTGTTGGTTACCGCTTGCAGT................................................. 22 1 1 20.00 20 5 0 10 2 1 2
............................................................................................CGTTGTTGGTTACCGCTTGCAGC................................................. 23 2 1 14.00 14 14 0 0 0 0 0
..................................................GCAAGTGAAGACAGCATATGCC............................................................................................ 22 1 1 13.00 13 13 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCAC.................................................. 22 1 1 13.00 13 11 0 1 0 1 0
............................................................................................CGTTGTTGGTTACCGCTTGCA................................................... 21 1 1 13.00 13 13 0 0 0 0 0
............................................................................................CATCGTTGGTTACCGCTTGCAGT................................................. 23 2 1 12.00 12 12 0 0 0 0 0
............................................................................................CACTGTTGGTTACCGCTTGCAG.................................................. 22 1 1 12.00 12 10 2 0 0 0 0
............................................................................................CACTGTTGGTTACCGCTTGCAGT................................................. 23 2 1 12.00 12 12 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCAT.................................................. 22 1 1 12.00 12 4 0 4 0 1 3
............................................................................................CATTGTTGGTTACCGCTTGCCGT................................................. 23 2 1 12.00 12 0 6 0 0 1 5
..................................................GCAAGTGAAGACAGCATATGC............................................................................................. 21 0 1 11.00 11 7 1 0 2 0 1
...........................................................................................TCATTGTTGGTTACCGCTTGCAG.................................................. 23 0 1 10.00 10 7 2 1 0 0 0
.............................................................................................ATTGTTGGTTACCGCTTGCA................................................... 20 0 1 10.00 10 2 3 4 0 0 1
............................................................................................CTTTGTTGGTTACCGCTTGCAGT................................................. 23 2 1 8.00 8 8 0 0 0 0 0
............................................................................................CATGGTTGGTTACCGCTTGCAGT................................................. 23 2 1 8.00 8 8 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGT.................................................... 20 1 1 7.00 7 1 0 0 2 2 2
............................................................................................CATGGTTGGTTACCGCTTGCAG.................................................. 22 1 1 5.00 5 5 0 0 0 0 0
............................................................................................CACTGTTGGTTACCGCTTGCAGC................................................. 23 2 1 5.00 5 5 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTCAGT................................................. 23 2 1 5.00 5 0 0 0 0 0 5
............................................................................................CATCGTTGGTTACCGCTTGCAGC................................................. 23 2 1 5.00 5 5 0 0 0 0 0
..................................................GCAAGTGAAGACAGCATATGCTT........................................................................................... 23 0 1 5.00 5 0 0 2 3 0 0
............................................................................................CATTGTTGGTTACCGCTTTCA................................................... 21 1 1 5.00 5 0 0 0 0 2 3
...........................................................................................CCATTGTTGGTTACCGCTTGCAGT................................................. 24 2 1 5.00 5 5 0 0 0 0 0
................................................................................................GTTGGTTACCGCTTGCAGT................................................. 19 1 1 4.00 4 1 0 1 2 0 0
............................................................................................CTTTGTTGGTTACCGCTTGCAG.................................................. 22 1 1 4.00 4 3 1 0 0 0 0
.............................................................................................ATTGTTGGTTACCGCTTGCAGC................................................. 22 1 1 4.00 4 4 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTC.................................................... 20 1 1 4.00 4 0 0 0 0 0 4
............................................................................................CATGGTTGGTTACCGCTTGCAGC................................................. 23 2 1 4.00 4 4 0 0 0 0 0
........................................................................TAGCATTGTAAATAACTAAT........................................................................ 20 0 1 4.00 4 1 1 1 0 1 0
............................................................................................CATTGTTGGTTACCGCTTTCCG.................................................. 22 2 1 4.00 4 0 2 0 0 0 2
............................................................................................CATTGTTGGTTACCGCTTGCC................................................... 21 1 1 4.00 4 2 1 0 0 0 1
............................................................................................CATCGTTGGTTACCGCTTGCAG.................................................. 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TCATTGTTGGTTACCGCTTGCAGT................................................. 24 1 1 3.00 3 2 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTCAT.................................................. 22 2 1 3.00 3 0 0 0 0 0 3
............................................................................................CATTGTTGGTTACCGCTTGCAGG................................................. 23 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................CCATTGTTGGTTACCGCTTGCAG.................................................. 23 1 1 3.00 3 2 0 1 0 0 0
............................................................................................TATTGTTGGTTACCGCTTGCAG.................................................. 22 1 1 3.00 3 1 1 0 0 1 0
............................................................................................CATTGTTGGTTACCGATTGCAG.................................................. 22 1 1 3.00 3 0 3 0 0 0 0
..................................................GCAAGTGAAGACAGCATATG.............................................................................................. 20 0 1 3.00 3 2 0 1 0 0 0
............................................................................................CATTGTTGGTTACCGATTGCAGT................................................. 23 2 1 3.00 3 0 2 1 0 0 0
............................................................................................CATTGTTGGGTACCGCTTGCAGT................................................. 23 2 1 3.00 3 2 0 1 0 0 0
...........................................................................................TCATTGTTGGTTACCGCTTGC.................................................... 21 0 1 3.00 3 1 0 2 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCAGAAA............................................... 25 1 1 3.00 3 2 0 1 0 0 0
............................................................................................CATTGTTGGTTACCGCGTGCAGT................................................. 23 2 1 3.00 3 2 1 0 0 0 0
..............................................................................................TTGTTGGTTACCGCTTGCAG.................................................. 20 0 1 3.00 3 3 0 0 0 0 0
..........................................................................................ATCATTGTTGGTTACCGCTTG..................................................... 21 0 1 3.00 3 0 0 1 0 2 0
............................................................................................CATTGTTAGTTACCGCTTGCAGT................................................. 23 2 1 3.00 3 1 1 0 1 0 0
..................................................GCAAGTGAAGACAGCATATGCTTAGC........................................................................................ 26 0 1 3.00 3 3 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCAGTC................................................ 24 2 1 3.00 3 3 0 0 0 0 0
..................................................GGAAGTGAAGACAGCATATGCC............................................................................................ 22 2 1 3.00 3 3 0 0 0 0 0
............................................................................................CATTGTTGGTTACCCCTTGCAGT................................................. 23 2 1 3.00 3 2 0 0 0 0 1
............................................................................................CATTGGTGGTTACCGCTTGCAGC................................................. 23 2 1 3.00 3 3 0 0 0 0 0
............................................................................................CATGGTTGGTTACCGCTTGC.................................................... 20 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGCTTACCGCTTGCAGT................................................. 23 2 1 2.00 2 1 1 0 0 0 0
...........................................................................................CCATTGTTGGTTACCGCTTGCA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATAGTTGGTTACCGCTTGCAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CATGGTTGGTTACCGCTTGCAA.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCAGAT................................................ 24 1 1 2.00 2 1 1 0 0 0 0
............................................................................................TATTGTTGGTTACCGCTTGCAGC................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CACTGTTGGTTACCGCTTGCAGA................................................. 23 1 1 2.00 2 2 0 0 0 0 0
..............................................................................................TTGTTGGTTACCGCTTGCA................................................... 19 0 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCAAAAA............................................... 25 2 1 2.00 2 0 0 2 0 0 0
..............................................................................................TTGTTGGTTACCGCTTGC.................................................... 18 0 1 2.00 2 1 0 1 0 0 0
............................................................................................CATTGTTGGTTATCGCTTGCAGT................................................. 23 2 1 2.00 2 1 0 0 0 0 1
..........................................................................................ATCATTGTTGGTTACCGCTTGCAG.................................................. 24 0 1 2.00 2 1 1 0 0 0 0
..................................................GCAAGTGAAGACAGCATATGCTTAGCA....................................................................................... 27 0 1 2.00 2 0 0 2 0 0 0
............................................................................................CATTGTTGGTTACCTCTTGCAG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCACC................................................. 23 2 1 2.00 2 2 0 0 0 0 0
...................................................CAAGTGAAGACAGCATATGCT............................................................................................ 21 0 1 2.00 2 1 0 1 0 0 0
.............................................................................................ATTGTTGGTTACCGCTTGCCG.................................................. 21 1 1 2.00 2 0 1 0 0 0 1
............................................................................................CATTGGTGGTTACCGCTTGCAG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGTTTGCAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
...........................................................................................CCATTGTTGGTTACCGCTTGCAGC................................................. 24 2 1 2.00 2 2 0 0 0 0 0
......................................................GTGAAGACAGCATATGCTT........................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCG................................................... 21 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGTAG.................................................. 22 1 1 2.00 2 1 1 0 0 0 0
............................................................................................TATTGTTGGTTACCGCTTGCAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CATAGTTGGTTACCGCTTGCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATAGTTGGTTACCGCTTGCAGC................................................. 23 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................ATCATTGTTGGTTACCGCTTGCAGC................................................. 25 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TCATTGTTGGTTACCGCTTGCAGC................................................. 24 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGATACCGCTTGCAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGCTGGTTACCGCTTGCA................................................... 21 1 1 2.00 2 1 0 0 0 1 0
............................................................................................CATTGTTGGTTACCGCCTGCAG.................................................. 22 1 1 2.00 2 0 1 0 0 1 0
.............................................................................................AGTGTTGGTTACCGCTTGCAGT................................................. 22 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CACTGTTGGTTACCGCTTGCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGTTACCACTTGCAGT................................................. 23 2 1 2.00 2 0 0 1 0 0 1
............................................................................................CGTTGTTGGTTACCGCTTGCAGA................................................. 23 1 1 2.00 2 2 0 0 0 0 0
..................................................GGAAGTGAAGACAGCATATGC............................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0
..................................................ACAAGTGAAGACAGCATATGCT............................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCATT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCCTGCAGT................................................. 23 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................ATCATTGTTGGTTACCGCTTGC.................................................... 22 0 1 2.00 2 2 0 0 0 0 0
..................................................GCAAGGGAAGACAGCATATGCT............................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
..............................................................................................TTGTTGGTTACCGCTTGCAGC................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................ATCATTGTTGGTTACCGCTTGCAC.................................................. 24 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CACTGTTGGTTACCGCTTGC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................ATTGTTGGCTACCGCTTGCAGC................................................. 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGGTGGTTACCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCGTTGAG.................................................. 22 3 1 1.00 1 0 1 0 0 0 0
..........................................................................................ATAATTGTTGGTTACCGCTTGCACC................................................. 25 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGATTGTTGGTTACCGCTTGCAGT................................................. 24 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CGTTGTTGGTTGCCGCTTGCAGT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................TCATTGTTGGTTACCGCTTGCAC.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TCATTGTTGGTTACCGCTTGCCG.................................................. 23 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTTTTGGTTACCGCTTGCAG.................................................. 22 1 1 1.00 1 0 0 0 1 0 0
............................................................................................CATTGTTGGTTACAGCTTTCAG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTCGCAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..ACTGAGCAGGACATTGAAACCCAT.......................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0
........................................................................................TAATCATTGTTGGTTACCGCTTGCAG.................................................. 26 0 1 1.00 1 1 0 0 0 0 0
..................................................GCAACTGAAGACAGCATATGC............................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0
............................................................................................CATTGTTGGTTACCCCTTTCAG.................................................. 22 2 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTACCGCTTGCGGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGGTACCGCCTGCAGT................................................. 23 3 1 1.00 1 0 0 0 0 0 1
..................................................GCATGTGAAGACAGCATATGC............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................ATTGTTGGTTACCGCTTTCCG.................................................. 21 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................AGCATTGTTGGTTACCGCTTGCAG.................................................. 24 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTAGGTTACGGCTTGCAGT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................TATTGTTGGTTACCGCTTGCAGAT................................................ 24 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACTGCTTGCAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTCTTGGTTACCGCTTGCAC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTCCCGCTTGCAGA................................................. 23 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCTCGTGCAG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGA.................................................... 20 1 1 1.00 1 0 0 0 1 0 0
............................................................................................CATTGCTGGTTACCGCCTGCCG.................................................. 22 3 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTCCAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCTGT................................................. 23 2 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTACCGCTTGCGG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGGTACCTCTTGCAGT................................................. 23 3 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTAGCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTATTGGTTACCGCTTGCAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACAGCTTGCAGT................................................. 23 2 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTGCCGCTTGCAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCACTTGCAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGATTACCGCTTGCAGT................................................. 23 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CGCTGTTGGTTACCGCTTGCAGT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..................................................GCAAGTGAAGCCAGCATATGCT............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................GCAAGTGAAGACAGCATATGCTTA.......................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0
..........................................TAATAATGGCAGGTGAAGACGGC................................................................................................... 23 3 1 1.00 1 0 0 0 0 1 0
............................................................................................CGCTGTTGGTTACCGCTTGCAG.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTAACGCTTGCAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTGGCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATCGTTGGTTACCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CGTTGTTGGTTACCGCGTGCA................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TATTGTTGGTTACCGCTTGCAGTT................................................ 24 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGCTGGTTACCGCTTGCAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0
................................................................................................GTTGGTTACCGCTTGCAG.................................................. 18 0 1 1.00 1 0 1 0 0 0 0
............................................................................................ACTTGTTGGTTACCGCTTGCAG.................................................. 22 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTGGTTACCGCTTGCAGCT................................................ 24 2 1 1.00 1 0 0 1 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTCAGTA................................................ 24 2 1 1.00 1 0 0 1 0 0 0
.........................................................................................AATCATTGTTGGTTACCGCTT...................................................... 21 0 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTTTTGGTTACCGCTTGCAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..................................................GTAAGTGAAGACAGCATATGCT............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGTTTGGA................................................... 21 2 1 1.00 1 0 1 0 0 0 0
.......................................................TTAAGACAGCATATGCTTAGCATT..................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TAATCATTGTTGGTTACCGCTTGCAGT................................................. 27 1 1 1.00 1 0 0 0 1 0 0
.................................................................................AAATAACTAATCATTGTTGGTTACCGCTT...................................................... 29 0 1 1.00 1 0 0 1 0 0 0
............................................................................................CATTGTGGGTTACCGCGTGCA................................................... 21 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTGGTTACCGCTTGCAGTTT............................................... 25 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGGTACCGCTTGCAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGATGGTTACCGCTTGCG................................................... 21 2 1 1.00 1 0 1 0 0 0 0
.......................................................................................CTAATCATTGTTGGTTACCGCTTGC.................................................... 25 0 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTATTGGTTACCGCTTGCAG.................................................. 22 1 1 1.00 1 0 0 0 0 1 0
............................................................................................CATGGTTGGTTACCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCTGC................................................. 23 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTCGTTACCGCTTGCAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CGTTGTTGGTTACCGCTTCCAG.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
................................................................................................GTTGGTTACCGCTTGCAGC................................................. 19 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTAACGCTTGCGG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................AATTGTTGGTTACCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGTTTACCGCTTGCAGT................................................. 23 2 1 1.00 1 0 0 0 1 0 0
..........................................................................................ATCATTGTTGGTTACCGCTTGCA................................................... 23 0 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTCT................................................... 21 2 1 1.00 1 0 0 0 0 0 1
............................................................................................CACTGTTGGTTACCGCTTGCCG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTGACCGCTTGCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGGTGGTTACCGCTTGCAGTC................................................ 24 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTATCGCTTGCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CTTTGTTGGTTACCGCTTGCAGA................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................AGTGAAGACAGCATATGCTTAGC........................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................ATTGTTGGTTACCGCTTGCAC.................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGCTACCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GCATTGTTGGTTACCGCTTGCA................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................CATAGTTGGTTACCGCTTCCAGT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACTGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................CGCAAGTGAAGACAGCATATGCC............................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
........................................................................CAGCATTGTAAATAACTAAT........................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCATG................................................. 23 2 1 1.00 1 0 0 0 0 0 1
.............................................................................................ATTGTTGGTTACCGCTTGGCG.................................................. 21 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTGGATACCGCTTTCTG.................................................. 22 3 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGCTTACCGCTTGCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................TGAAGACAGCATATGCTTAGC........................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
..................................................GTAAGTGAAGACAGCATATGC............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTCGG.................................................. 22 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTGGCTACCGCTTGCAGCG................................................ 24 3 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTAACGCTTGCAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTA..................................................... 19 1 1 1.00 1 0 0 0 0 1 0
...............................................................................................TGTTGGTTACCGCTTGCAGT................................................. 20 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCTCTTGCAGT................................................. 23 2 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGATGGTTACCGCTTTCA................................................... 21 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTGGTTACCGCTTTCC................................................... 21 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGATTGCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTT.................................................... 20 2 1 1.00 1 0 0 0 0 0 1
.............................................................................................ATTGTTGGTTACCGCTTTCA................................................... 20 1 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTGCCGCTTGC.................................................... 20 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCGTGCACG................................................. 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGGTACCGCTTGCTGT................................................. 23 3 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTGGTCACCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................GCAAGTGCAGACAGCATATGC............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGTA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGCTACCGCTCGC.................................................... 20 2 1 1.00 1 0 0 0 0 1 0
.........................................................................................GATCAGTGTTGGTTACCGCTTGCAG.................................................. 25 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CTTTGTTGGTTACCGCTTGC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTTGTTACCGCTTGCAG.................................................. 22 1 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTCGGTTATCGCTTGCCG.................................................. 22 3 1 1.00 1 0 1 0 0 0 0
............................................................................................CAGTGTTGGTTACCGCATGCAGT................................................. 23 3 1 1.00 1 0 0 0 0 1 0
..................................................GGAAGTGAAGACAGCATATGCT............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTGCCGCTTGCAG.................................................. 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................CATTTTTGGTTACCGCTTGCAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTGGGTTACCGCTTGCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACTGCTTTCAC.................................................. 22 3 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACTGCTTGCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCACT................................................. 23 2 1 1.00 1 0 0 0 1 0 0
............................................................................................CATTGTTGGTTACCGCTTGTAT.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTCATT................................................. 23 3 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTACCGCTTGCAGAA................................................ 24 0 1 1.00 1 1 0 0 0 0 0
..........................................TAATAATGGCAGGTGAAGAC...................................................................................................... 20 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTGGTTACCACTTGCAGC................................................. 23 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CATTGTTGGTTACCGCTGGCAGT................................................. 23 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CGTTGTTGGTTACCGCTTCCAGA................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TCATTGTTGGTTACCGCTTTCCG.................................................. 23 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGGTACCGCTTGCAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................ATTGTTAGTTACCGCTTGCA................................................... 20 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCGTGCAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTTTTGGTTACCGCCTGCCG.................................................. 22 3 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTGGGTTATCGCTTGCAG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGTTTGCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CACTGTTGGTTACCGCTTTCAG.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGATTGTTGGTTACCGCTTGCAGC................................................. 24 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CGTTGGTGGTTACCGCTTGCA................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGATTTCAG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................TGTTGTTGGTTACCGCTTGCAGT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGGTACCGCTTGC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................TGGTTACCGCTTGCAGAAG............................................... 19 0 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGAGTGCAG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTCC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CGTTGTTGGTTACCGCTTGC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...................................................................................ATAACTAATCATTGTTGGTTACCGC........................................................ 25 0 1 1.00 1 1 0 0 0 0 0
............................................................................................CAGTGTTGGTTGCCGCTTGCAG.................................................. 22 2 1 1.00 1 0 0 0 0 0 1
..................................................GGAAGTGAAGACAGCATATGCTTAGC........................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CACTGTTGATTACCGCTTGCAGT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCCTGCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGGTACCGCTTGCAC.................................................. 22 2 1 1.00 1 0 0 0 0 0 1
..............................................................................................TTGTTGGTTACCCCTTGCA................................................... 19 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TAACTAATCATTGTTGGTTACCGCT....................................................... 25 0 1 1.00 1 0 0 1 0 0 0
............................................................................................CATTGTTGGTTACCCCTTGCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTGCT................................................... 21 1 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTACTGCTTGCAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCCCTTGCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................ATAATTGTTGGTTACCGCTTGC.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGCGTACCGCTTGCA................................................... 21 2 1 1.00 1 0 0 0 0 0 1
............................................................................................CATTGTTGGATGACGCTTGCAG.................................................. 22 3 1 1.00 1 0 0 0 0 1 0
.....GAGCAGGACATTGAAACCC............................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACCGCATGGAG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTGCCGCTTGCA................................................... 21 1 1 1.00 1 0 0 1 0 0 0
............................................................................................CATTGTTGGCTACCGCTTTCA................................................... 21 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTACCGCTTACAGT................................................. 23 2 1 1.00 1 0 1 0 0 0 0
...............................................TCCGCAAGTGAAGACAGCATATGCT............................................................................................ 25 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CTTTGTTGGTTACCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTAACCGCTTGCAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTTGTTACCGCTTGCAC.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTTGGTTAACGCTTGCAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTCGGTTACCGCTTGCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTACTGCTGTCAG.................................................. 22 3 2 0.50 1 0 1 0 0 0 0
.............................................................................................ATGGTTGGTTACCGCTTGCAA.................................................. 21 2 2 0.50 1 1 0 0 0 0 0
............................................................................................CATTGTTGGTTATAGATTGCAG.................................................. 22 3 2 0.50 1 0 0 0 0 0 1
.............................................................................................ATTGTTGGTTACCGCTTTT.................................................... 19 2 2 0.50 1 0 0 1 0 0 0
............................................................................................TATTGTTGGTTACCGCTTGC.................................................... 20 1 2 0.50 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTAGCGCTTTCAT.................................................. 22 3 2 0.50 1 0 1 0 0 0 0
............................................................................................CATTGTTGTTTACCGCTTTCA................................................... 21 2 2 0.50 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTACCGCTTTCGGT................................................. 23 3 2 0.50 1 0 0 0 0 0 1
............................................................................................CATATTTGGTTACCGCTTGCAGT................................................. 23 3 2 0.50 1 1 0 0 0 0 0
............................................................................................CACTGTTGGTTACCGCTTTCAGT................................................. 23 3 2 0.50 1 1 0 0 0 0 0
.............................................................................................ATTGTTGGTTACCGCTTCCAGTT................................................ 23 3 2 0.50 1 0 0 1 0 0 0
............................................................................................CATTGTTGGTTACCGCTTTCG................................................... 21 2 2 0.50 1 0 1 0 0 0 0
............................................................................................CATTGATGGTTACCGCTTTCC................................................... 21 3 2 0.50 1 0 0 0 0 0 1
............................................................................................CATTGTTGGTTCCCCCTTGC.................................................... 20 2 2 0.50 1 0 1 0 0 0 0

Anti-sense strand reads

GGTGACTCGTCCTGTAACTTTGGGTAAAGCCTCGGTAACCGTATTATTTCCGTTCACTTCTGTCGTATACGAATCGTAACATTTATTGATTAGTAACAACCAATGGCGAACGTCTTCCTATTCGCGTGGTACTTCGGTTTCTAAACCGACATGTTCTTGTTCCT

**************************************************(((((((..(((((((.(((.((((............)))).))))))).)))..)))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 V049

head

 V110

male body
.....................................................................CGATTCGTACCATTTATTGATAAG....................................................................... 24 3 2 0.50 1 1 0 0
........................................................................................................GGCGAACGCCTTCCTCTCC......................................... 19 3 6 0.17 1 0 1 0
..............................................................................ACATTTATTTAGTAGTAAC................................................................... 19 2 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6308:3217032-3217195 + dmo_450 confident CCACTGAGCAGGACATTGAAACCCATTTCGGAGCCATTGGCATAATAAAGGCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTTAGCATTGTAAATAACTAATCATTGTTGGTTA---------C------C---GCTTGCAGAAGGATAAGCGCACCATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGA
droVir3 scaffold_12472:263764-263941 - CCACAGAGCAGGACATTGAGACTCACTTCGGTGCCATTGGCATTATAAAGGCAAGTGT-----------------------------A-------CCA------T---------------------------------------------------------------------------------TTACCATCATGATTCATTTTCGTGCATTGTGCCTAAT-------------------------AT-AGATTATTATTTTTTG---------C------A---TATTATAGAAGGACAAGCGCACCATGAAACCAAAGATTTGGTTGTATAAGAATAAGGA
droGri2 scaffold_15203:4719893-4720067 + CAACCGAGCAGGACATCGAGACTCACTTCGGGGCCATTGGCATCATCAAGGTAACGTA-----------------------------A-------CCA------AAT----TCGTTATTC--AAA---TC-----------------------------------------------------------------------AATTTCGTGCAT-GTTTGTAATATGGTAAATGT-----------------------------TTGG---------C------ATT---TTATAGAAAGACAAGCGCACCATGAAACCAAAGATTTGGTTGTACAAGAATAAGGA
droWil2 scf2_1100000004909:6538393-6538561 + CCACAGAGCAAGAGATTGAAACTCATTTTGGTGCCATTGGTATAATAAAGGTTTGTAT-----------------------------A-------------------------TTCGTAGATGGA-CAACCAATTTGGATTCTTTTT------------------------------------------------------------GGTAATAATTTATA-------------------------------------------ATA---------A------ATT---TTACAGAAAGATAAGCGTACTATGAAACCAAAGATTTGGTTATATAAGAATAAAGA
dp5 XL_group1e:10412167-10412359 - CCACAGAGCAAGACATTGAGACGCATTTCGGTGCCATTGGCATCATCAAGGCAAGTAT-----------------------------ATGT-CC---------G------GA-------TATCGA--------------------------------------------TGGAATCCCGA--------A---TCGTCAAA--AGTCTGGGCAGGAGTTCTAAT-------------------------ATCAAATCAATCAAACTCT---------C------A---AATTGCAGAAGGATAAGCGTACAATGAAGCCAAAGATTTGGCTATACAAGAACAAGGA
droPer2 scaffold_69:107321-107524 + CCACAGAGCAAGACATTGAGACGCATTTCGGTGCCATTGGCATCATCAAGGCAAGTAT-----------------------------ATGT-CC---------G------GA-------TATGGA--------------------------------------------TGGAATCCCGAAGCCCATCCCCATCGTCACA--AGTCTGGACAGGAGTTCTAAT-------------------------ATCAAATCAATCAAACTCT---------C------A---AATTGCAGAAGGATAAGCGTACAATGAAGCCAAAGATTTGGCTCTACAAGAACAAGGA
droAna3 scaffold_13137:1193212-1193376 - CAACAGAGCAGGATATTGAGACTCATTTTGGAGCTATTGGAATCATAAAGGCAAGTAT------------------------------TAT-TT---------G------GTTTTTATG----------------------------------------------------GAATT---------------------------------------------AT-------------------------ATTTCATAATGCAAAATAT---------TACACCGT---TATTTTAGAAAGACAAACGCACAATGAAGCCAAAGATTTGGCTCTATAAGAATAAAGA
droBip1 scf7180000394930:2399-2596 + CAACAGAGCAGGATATTGAGACTCATTTCGGAGCTATTGGAATAATAAAGGCAAGTCTTTTTTTTTTTTTTTTTTTTTTTTGGTATAA-GATTAGTCATA---GTA--------------------------------------------------------GCAT--------------------TTTTTTTT----------------------------------------------------------------ACAAAATATTTTCTTTTGTATTCCCA---AATTTCAGAAAGACAAACGCACAATGAAGCCAAAGATTTGGCTGTATAAGAACAAGGA
droKik1 scf7180000302696:1025750-1025827 + TAACCCAACAT-------------------------------------------------------------------------------------------------------------------------------------------------C-----TT---------------------------------------------------------------------------------------------------TTGT---------G------GCT---TTGCAGAAGGACAAGCGCACCATGAAGCCCAAAATTTGGCTGTACAAGAATAAGGA
droFic1 scf7180000453495:459264-459427 + CCACAGAGCAGGATATTGAGACTCACTTTGGAGCTATTGGAATTATCAAGGTAAGTTG-----------------------------A-CT-CT---------G-----------CAAGG--AAA---ATC-A--------------------------------------------------------------------------------------------------TGTTTAGAATT--AAATTTCAAATTTA------TTA---------A------ACT---TTGTAGAAGGACAAGCGTACCATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGA
droEle1 scf7180000491182:94869-95050 - CCACAGAGCAGGACATTGAAACTCACTTCGGAGCCATCGGTATAATCAAGGCAAGTCA-------------------------------------TCATC---GGACT--CTCCCAACAGGC-GACAAGCC-GTTTTGACCATTCCTTTTTCCTACC---TTGTA--------------------------------------------------------------------------------------------------TTTT---------G------ACT---CAACAGAAGGACAAGCGCACTATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGA
droRho1 scf7180000778073:9795-9972 - CCACAGAGCAGGATATTGAGACTCACTTCGGAGCTATTGGCATAATCAAGGCAAGTAA-------------------------------------TCATA---GGACT--GTCCTCACAGGCGGC-CAGCTCTTTTGACCACTGGTTTCTTTTTGTAC----------------------------------------------------------------------------------------------------------TTT---------G------GCT---CAACAGAAGGACAAGCGTACAATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGA
droBia1 scf7180000302126:820398-820570 - CCACAGAGCAGGATATTGAGACCCACTTTGGAGCCATTGGTATTATTAAGGTATGTTT-------------------------------------TCGG----GGAAT--GTCTTTATG--TAGA---TAT-ATTTGAACCCTTCTTTCTCT-TCCT-----CCA---------------------------------------------------------------------------------------------------TTG---------C------GCT---TAACAGAAGGACAAACGCACCATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGA
droTak1 scf7180000415289:248363-248415 + C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGGACAAGCGTACGATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGA
droEug1 scf7180000409008:1423766-1423935 - CCACCGAGCAGGATATTGAAACACACTTCGGAGCTATTGGAATTATCAAGGCAAGTCA----------------------------------------TA---GGATT--GTCTTCCTAG--AAA---TCC-ATTTTAATCTT-CTT-CCTTTTATT-----TTA---------------------------------------------------------------------------------------------------TTT---------G------AAT---TTATAGAAAGACAAGCGTACGATGAAGCCTAAGATTTGGCTGTACAAGAACAAGGA
dm3 chrX:16186094-16186277 + CCACCGAGCAGGACATTGAGACACACTTTGGAGCAATTGGCATCATCAAGGCAAGTAG-------------------------------------TA---ATG-TATTTTATGTATCTG--TAGC---TAC-GTTTTAACCTTTGTATCTTTCTATTCCTTTGCA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAACAACAGAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGA
droSim2 x:15305970-15306158 + CCACCGAGCAGGACATTGAGACTCACTTTGGAGCCATTGGCATCATCAAGGCAAGTAG-------------------------------------TA---ATG-CATTTTAGGTCTCTG--TAGC---TAC-GTTTTAACCATTGTATCTTTGTATCCCTTTGCAACTTTGGAATC-------------------------------------------------------------------------------------------------------------CCAACAACAGAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGA
droSec2 scaffold_17:12974-13157 + CCACCGAGCAGGACATTGAGACTCACTTTGGAGCCATTGGCATCATCAAGGCAAGTAG-------------------------------------TA---ATG-TATTTTAGGTCTCTG--TAGC---TAC-GTTTTAACCTTTGTATCTTTGTATCCCATTGCA---------------------------------------------------------------------------------------------------ACT---------G------ACCCAACAACAGAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGA
droYak3 X:10331751-10331930 + CCACCGAGCAGGATATTGAAACTCACTTTGGAGCGATTGGAATCATCAAGGCAAGTAG-------------------------------------TCATC---ACATT--ATCCGTCTG--TAGA---CAC-GTTTTAACATTTGAATCGTTCTATCCTTTTTCA---------------------------------------------------------------------------------------------------TCT---------G------ACT---TAACAGAAAGATAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGCACAAGGA
droEre2 scaffold_4690:10901501-10901682 - CCACCGAGCAGGATATTGAGACTCACTTTGGAGCAATTGGAATCATCAAGGCAAGTAA-------------------------------------ACATGATG-CATG--ATGTGTATG--TCGA---AAC-GTTTTAACCTTTGTATCTTTGTATCCCATTGCA---------------------------------------------------------------------------------------------------TCT---------G------ATT---TAACAGAAAGACAAGCGTACTATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCACTGAGCAGGACATTGAAACCCATTTCGGAGCCATTGGCATAATAAAGGCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTTAGCATTGTAAATAACTAATCATTGTTGGTTA---------C------C---GCTTGCAGAAGGATAAGCGCACCATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGT.................................................2311089.001089144803346655131
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAG..................................................221824.0082487245235336254
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCA...................................................211288.002884288122311013
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGC.................................................231158.0015810101560
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGC....................................................20183.00831410412403
..................................................GCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCT..............................................................................................................22168.00684211591
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGA.................................................23131.003121012142
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTG.....................................................19128.00281716211
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAA..................................................22126.00264300190
................................................................................................................................................................................................................................................................ATTGTTGGTTA---------C------C---GCTTGCAG..................................................21122.0022593320
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGTT................................................24121.00217001130
................................................................................................................................................................................................................................................................ATTGTTGGTTA---------C------C---GCTTGCAGT.................................................22120.00201002152
..................................................GCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCC..............................................................................................................22113.00130000130
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAC..................................................22113.00131001110
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAT..................................................22112.0012403140
..................................................GCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGC...............................................................................................................21111.0011011072
..............................................................................................................................................................................................................................................................TCATTGTTGGTTA---------C------C---GCTTGCAG..................................................23110.0010120070
................................................................................................................................................................................................................................................................ATTGTTGGTTA---------C------C---GCTTGCA...................................................20110.0010431020
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGT....................................................2017.007002212
..................................................GCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTT.............................................................................................................2315.005200003
...................................................................................................................................................................................................................................................................GTTGGTTA---------C------C---GCTTGCAGT.................................................1914.004100012
................................................................................................................................................................................................................................................................ATTGTTGGTTA---------C------C---GCTTGCAGC.................................................2214.004000040
...........................................................................................................................................................................................................................................TAGCATTGTAAATAACTAAT..........................................................................................2014.004110110
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCC...................................................2114.004011020
..............................................................................................................................................................................................................................................................TCATTGTTGGTTA---------C------C---GCTTGCAGT.................................................2413.003010020
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGG.................................................2313.003000030
..................................................GCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TG................................................................................................................2013.003100020
..............................................................................................................................................................................................................................................................TCATTGTTGGTTA---------C------C---GCTTGC....................................................2113.003200010
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGAAA...............................................2513.003100020
.................................................................................................................................................................................................................................................................TTGTTGGTTA---------C------C---GCTTGCAG..................................................2013.003000030
.............................................................................................................................................................................................................................................................ATCATTGTTGGTTA---------C------C---GCTTG.....................................................2113.003100200
..................................................GCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTTAGC..........................................................................................................2613.003000030
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGTC................................................2413.003000030
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGAT................................................2412.002010010
.................................................................................................................................................................................................................................................................TTGTTGGTTA---------C------C---GCTTGCA...................................................1912.002000020
.................................................................................................................................................................................................................................................................TTGTTGGTTA---------C------C---GCTTGC....................................................1812.002100010
.............................................................................................................................................................................................................................................................ATCATTGTTGGTTA---------C------C---GCTTGCAG..................................................2412.002010010
..................................................GCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTTAGCA.........................................................................................................2712.002200000
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCACC.................................................2312.002000020
...................................................CAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCT..............................................................................................................2112.002100010
......................................................GTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTT.............................................................................................................1912.002200000
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCG...................................................2112.002000020
.............................................................................................................................................................................................................................................................ATCATTGTTGGTTA---------C------C---GCTTGCAGC.................................................2512.002000020
..............................................................................................................................................................................................................................................................TCATTGTTGGTTA---------C------C---GCTTGCAGC.................................................2412.002000020
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCATT.................................................2312.002000020
.............................................................................................................................................................................................................................................................ATCATTGTTGGTTA---------C------C---GCTTGC....................................................2212.002000020
.................................................................................................................................................................................................................................................................TTGTTGGTTA---------C------C---GCTTGCAGC.................................................2111.001000010
.............................................................................................................................................................................................................................................................ATCATTGTTGGTTA---------C------C---GCTTGCAC..................................................2411.001000010
..............................................................................................................................................................................................................................................................TCATTGTTGGTTA---------C------C---GCTTGCAC..................................................2311.001000010
..ACTGAGCAGGACATTGAAACCCAT...............................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................TAATCATTGTTGGTTA---------C------C---GCTTGCAG..................................................2611.001000010
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGA....................................................2011.001000001
..................................................GCAAGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTTA............................................................................................................2411.001100000
...................................................................................................................................................................................................................................................................GTTGGTTA---------C------C---GCTTGCAG..................................................1811.001010000
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGCT................................................2411.001100000
............................................................................................................................................................................................................................................................AATCATTGTTGGTTA---------C------C---GCTT......................................................2111.001000010
...........................................................................................................................................................................................................................................................TAATCATTGTTGGTTA---------C------C---GCTTGCAGT.................................................2711.001000001
....................................................................................................................................................................................................................................................AAATAACTAATCATTGTTGGTTA---------C------C---GCTT......................................................2911.001100000
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGTTT...............................................2511.001000010
..........................................................................................................................................................................................................................................................CTAATCATTGTTGGTTA---------C------C---GCTTGC....................................................2511.001000010
...................................................................................................................................................................................................................................................................GTTGGTTA---------C------C---GCTTGCAGC.................................................1911.001000010
.............................................................................................................................................................................................................................................................ATCATTGTTGGTTA---------C------C---GCTTGCA...................................................2311.001010000
.....................................................AGTGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTTAGC..........................................................................................................2311.001100000
................................................................................................................................................................................................................................................................ATTGTTGGTTA---------C------C---GCTTGCAC..................................................2111.001000010
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCATG.................................................2311.001001000
.......................................................TGA-----------------------------A-GA-CA---------G------CA-------TA--------------------------------------------------------------------------------------------------------------TGCTTAGC..........................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTA.....................................................1911.001000100
..................................................................................................................................................................................................................................................................TGTTGGTTA---------C------C---GCTTGCAGT.................................................2011.001000010
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTTT....................................................2011.001001000
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCACT.................................................2311.001000001
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCAGAA................................................2411.001000010
.....................................................................................................................................................................................................................................................................TGGTTA---------C------C---GCTTGCAGAAG...............................................1911.001000010
......................................................................................................................................................................................................................................................ATAACTAATCATTGTTGGTTA---------C------C---GC........................................................2511.001000010
.......................................................................................................................................................................................................................................................TAACTAATCATTGTTGGTTA---------C------C---GCT.......................................................2511.001100000
...............................................................................................................................................................................................................................................................CATTGTTGGTTA---------C------C---GCTTGCT...................................................2111.001001000
.....GAGCAGGACATTGAAACCC.................................................................................................................................................................................................................................................................................................................................1911.001000010
................................................................................................................................................................................................................................................................ATTGTTGGTTA---------C------C---GCTTTT....................................................1920.501100000
droVir3
CCACAGAGCAGGACATTGAGACTCACTTCGGTGCCATTGGCATTATAAAGGCAAGTGT-----------------------------A-------CCA------T---------------------------------------------------------------------------------TTACCATCATGATTCATTTTCGTGCATTGTGCCTAAT-------------------------AT-AGATTATTATTTTTTG---------C------A---TATTATAGAAGGACAAGCGCACCATGAAACCAAAGATTTGGTTGTATAAGAATAAGGASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
................TGAGACTCACTTCGGTGCCATTGGCAT..............................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000020000000000000000
........CAGGACATTGAGACTCACTTCGGT.........................................................................................................................................................................................................................................................................................................................2412.0020010000000000100000000000000000000000000000000000000000000000000000000000000000
.....GAGCAGGACATTGAGACTCACTTCGG..........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000100000
......................TCACTTCGGTGCCATTGGCAT..............................................................................................................................................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..ACAGAGCAGGACATTGAGACTCACTTC............................................................................................................................................................................................................................................................................................................................2711.0010000000000010000000000000000000000000000000000000000000000000000000000000000000
.............CATTGAGACTCACTTCGGT.........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
........CAGGACATTGAGACTCACTTCGGTGCCA.....................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.CACAGAGCAGGACATTGA......................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
.CACAGAGCAGGACATTGAGACT..................................................................................................................................................................................................................................................................................................................................2211.0010000000000000100000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGCACCATGAAACCAAAGATTTGGTTGT.............2811.0010000000000000000000000001000000000000000000000000000000000000000000000000000000
droGri2
CAACCGAGCAGGACATCGAGACTCACTTCGGGGCCATTGGCATCATCAAGGTAACGTA-----------------------------A-------CCA------AAT----TCGTTATTC--AAA---TC-----------------------------------------------------------------------AATTTCGTGCAT-GTTTGTAATATGGTAAATGT-----------------------------TTGG---------C------ATT---TTATAGAAAGACAAGCGCACCATGAAACCAAAGATTTGGTTGTACAAGAATAAGGASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................................................................................................................................................................................................AAAGACAAGCGCACCATGAAACC...........................2311.00110
droWil2
CCACAGAGCAAGAGATTGAAACTCATTTTGGTGCCATTGGTATAATAAAGGTTTGTAT-----------------------------A-------------------------TTCGTAGATGGA-CAACCAATTTGGATTCTTTTT------------------------------------------------------------GGTAATAATTTATA-------------------------------------------ATA---------A------ATT---TTACAGAAAGATAAGCGTACTATGAAACCAAAGATTTGGTTATATAAGAATAAAGASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......GCAAGAGATTGAAACTCATTTTGGT.........................................................................................................................................................................................................................................................................................................................2520.50100100
...................................................................................................................................................................................................................................................................................................................ACTATGAAACCAAAGATTTGGT................2220.50100010
..............................................................................................................................................................................................................................................................................................................................AAAGATTTGGTTATATAAGAAT.....2220.50100010
........................................................................................................................................................................................................................................................................................................AAGATAAGCGTACTATGAAACC...........................2220.50110000
...............................TGCCATTGGTATAATAAAG.......................................................................................................................................................................................................................................................................................................1920.50100010
dp5
CCACAGAGCAAGACATTGAGACGCATTTCGGTGCCATTGGCATCATCAAGGCAAGTAT-----------------------------ATGT-CC---------G------GA-------TATCGA--------------------------------------------TGGAATCCCGA--------A---TCGTCAAA--AGTCTGGGCAGGAGTTCTAAT-------------------------ATCAAATCAATCAAACTCT---------C------A---AATTGCAGAAGGATAAGCGTACAATGAAGCCAAAGATTTGGCTATACAAGAACAAGGASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................AAAGATTTGGCTATACAAGAACAAGG.2611.0010000001000
...................GACGCATTTCGGTGCCATTGGCATCAT...........................................................................................................................................................................................................................................................................................................2711.0010000100000
........................................................................................................................................................................................................................................................................................................AGGATAAGCGTACAATGAAGCC...........................2211.0010100000000
droPer2
CCACAGAGCAAGACATTGAGACGCATTTCGGTGCCATTGGCATCATCAAGGCAAGTAT-----------------------------ATGT-CC---------G------GA-------TATGGA--------------------------------------------TGGAATCCCGAAGCCCATCCCCATCGTCACA--AGTCTGGACAGGAGTTCTAAT-------------------------ATCAAATCAATCAAACTCT---------C------A---AATTGCAGAAGGATAAGCGTACAATGAAGCCAAAGATTTGGCTCTACAAGAACAAGGASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................................................................................................................................................................................................AGGATAAGCGTACAATGAAGCC...........................2215.005500000
......................GCATTTCGGTGCCATTGGCAT..............................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................................AT-------------------------ATCAAATCAATCAAACTCT---------C------A---..........................................................2311.001010000
.................GAGACGCATTTCGGTGCCATTGGCATC.............................................................................................................................................................................................................................................................................................................2711.001010000
......AGCAAGACATTGAGACGCATTTCGG..........................................................................................................................................................................................................................................................................................................................2511.001000001
droAna3
CAACAGAGCAGGATATTGAGACTCATTTTGGAGCTATTGGAATCATAAAGGCAAGTAT------------------------------TAT-TT---------G------GTTTTTATG----------------------------------------------------GAATT---------------------------------------------AT-------------------------ATTTCATAATGCAAAATAT---------TACACCGT---TATTTTAGAAAGACAAACGCACAATGAAGCCAAAGATTTGGCTCTATAAGAATAAAGASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
................................GCTATTGGAATCATAAAG.......................................................................................................................................................................................................................................................................................................1811.001000001
..............ATTGAGACTCATTTTGGAGCT......................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
CAACAGAGCAGGATATTGAGACTCATTTCGGAGCTATTGGAATAATAAAGGCAAGTCTTTTTTTTTTTTTTTTTTTTTTTTGGTATAA-GATTAGTCATA---GTA--------------------------------------------------------GCAT--------------------TTTTTTTT----------------------------------------------------------------ACAAAATATTTTCTTTTGTATTCCCA---AATTTCAGAAAGACAAACGCACAATGAAGCCAAAGATTTGGCTGTATAAGAACAAGGASizeHit CountTotal NormTotal
No Reads
droKik1
TAACCCAACAT-------------------------------------------------------------------------------------------------------------------------------------------------C-----TT---------------------------------------------------------------------------------------------------TTGT---------G------GCT---TTGCAGAAGGACAAGCGCACCATGAAGCCCAAAATTTGGCTGTACAAGAATAAGGASizeHit CountTotal NormTotal
No Reads
droFic1
CCACAGAGCAGGATATTGAGACTCACTTTGGAGCTATTGGAATTATCAAGGTAAGTTG-----------------------------A-CT-CT---------G-----------CAAGG--AAA---ATC-A--------------------------------------------------------------------------------------------------TGTTTAGAATT--AAATTTCAAATTTA------TTA---------A------ACT---TTGTAGAAGGACAAGCGTACCATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotal
No Reads
droEle1
CCACAGAGCAGGACATTGAAACTCACTTCGGAGCCATCGGTATAATCAAGGCAAGTCA-------------------------------------TCATC---GGACT--CTCCCAACAGGC-GACAAGCC-GTTTTGACCATTCCTTTTTCCTACC---TTGTA--------------------------------------------------------------------------------------------------TTTT---------G------ACT---CAACAGAAGGACAAGCGCACTATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotal
No Reads
droRho1
CCACAGAGCAGGATATTGAGACTCACTTCGGAGCTATTGGCATAATCAAGGCAAGTAA-------------------------------------TCATA---GGACT--GTCCTCACAGGCGGC-CAGCTCTTTTGACCACTGGTTTCTTTTTGTAC----------------------------------------------------------------------------------------------------------TTT---------G------GCT---CAACAGAAGGACAAGCGTACAATGAAGCCAAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotal
No Reads
droBia1
CCACAGAGCAGGATATTGAGACCCACTTTGGAGCCATTGGTATTATTAAGGTATGTTT-------------------------------------TCGG----GGAAT--GTCTTTATG--TAGA---TAT-ATTTGAACCCTTCTTTCTCT-TCCT-----CCA---------------------------------------------------------------------------------------------------TTG---------C------GCT---TAACAGAAGGACAAACGCACCATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotal
No Reads
droTak1
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGGACAAGCGTACGATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotal
No Reads
droEug1
CCACCGAGCAGGATATTGAAACACACTTCGGAGCTATTGGAATTATCAAGGCAAGTCA----------------------------------------TA---GGATT--GTCTTCCTAG--AAA---TCC-ATTTTAATCTT-CTT-CCTTTTATT-----TTA---------------------------------------------------------------------------------------------------TTT---------G------AAT---TTATAGAAAGACAAGCGTACGATGAAGCCTAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotal
No Reads
dm3
CCACCGAGCAGGACATTGAGACACACTTTGGAGCAATTGGCATCATCAAGGCAAGTAG-------------------------------------TA---ATG-TATTTTATGTATCTG--TAGC---TAC-GTTTTAACCTTTGTATCTTTCTATTCCTTTGCA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAACAACAGAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................ACTTTGGAGCAATTGGCATCATC..........................................................................................................................................................................................................................................................................................................23117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACACTTTGGAGCAATTGGCAT..............................................................................................................................................................................................................................................................................................................2219.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGACACACTTTGGAGCAATTGGCA...............................................................................................................................................................................................................................................................................................................2418.008000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000
.....................CACACTTTGGAGCAATTGGCATCATC..........................................................................................................................................................................................................................................................................................................2618.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010140000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACACTTTGGAGCAATTGGCATCAT...........................................................................................................................................................................................................................................................................................................2518.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACATTGAGACACACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTGAGACACACTTTGGAGCAATTGGCA...............................................................................................................................................................................................................................................................................................................2717.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGAGACACACTTTGGAGCAATTGGC................................................................................................................................................................................................................................................................................................................2716.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACACACTTTGGAGCAATTGGCA...............................................................................................................................................................................................................................................................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................AGACACACTTTGGAGCAATTG..................................................................................................................................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGACACACTTTGGAGCAATTGGCATCA............................................................................................................................................................................................................................................................................................................2714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010
......................ACACTTTGGAGCAATTGGCATCATC..........................................................................................................................................................................................................................................................................................................2514.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATTGAGACACACTTTGGAGCA......................................................................................................................................................................................................................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACACTTTGGAGCAATTGGCATC.............................................................................................................................................................................................................................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AAGACAAGCGTACAATGAAGC............................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010010
.........AGGACATTGAGACACACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CAAGATTTGGCTGTACAAGAACAAGGA2713.003000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................CTTTGGAGCAATTGGCATCATCAAG.......................................................................................................................................................................................................................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TGAAGCCCAAGATTTGGCTGTACAAGAA......2813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGACACACTTTGGAGCAATTGGCATC.............................................................................................................................................................................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACACACTTTGGAGCAATTGGC................................................................................................................................................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACACTTTGGAGCAATTGGCA...............................................................................................................................................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGACACACTTTGGAGCAATTGGCAT..............................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACACTTTGGAGCAATTGG.................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACACTTTGGAGCAATTGGCATCAT...........................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACATTGAGACACACTTTGGA.........................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AGATTTGGCTGTACAAGAACAAG..2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AAGATTTGGCTGTACAAG........1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CACTTTGGAGCAATTGGCATCAT...........................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGGCTGTACAAGAACAAGG.1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACATTGAGACACACTTTGGAG........................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CACCGAGCAGGACATTGAGA....................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TGAAGCCCAAGATTTGGCTGTACAAG........2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TTGCA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAACAACAG..................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000
................TGAGACACACTTTGGAGCA......................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACATTGAGACACACTTTGGAGCAATTGGCA...............................................................................................................................................................................................................................................................................................................3012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACCGAGCAGGACATTGAGAC...................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACCGAGCAGGACATTGAGACACACT..............................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGAGACACACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACATTGAGACACACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AGAAAGACAAGCGTACAATGA...............................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTGAGACACACTTTGGAGCAAT....................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACACTTTGGAGCAATTGGCA...............................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGAGCAGGACATTGAGACACA................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AGATTTGGCTGTACAAGA.......1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTTATGTATCTG--TAGC---TAC-GT...................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACACTTTGGAGCAATTGGCATCATCAA........................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGAGACACACTTTGGAGCAATTGGCAT..............................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACTTTGGAGCAATTGGCATCA............................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATTGAGACACACTTTGGAGCAATTGG.................................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................G-TATTTTATGTATCTG--TC..............................................................................................................................................................................................................................1821.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000100000000000000000000000000000000000000
..........................TTTGGAGCAATTGGCATCATC..........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACATTGAGACACACTTTGGAGCAAT....................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACATTGAGACACACTTTGGA.........................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGTACAATGAAGCCCAAGATTTGGCTG..............2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAACAACAG..................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................TTGGAGCAATTGGCATCATC..........................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................ACACACTTTGGAGCAATTGGCATCATC..........................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACACACTTTGGAGCAATTG..................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................CACACTTTGGAGCAATTGGCATCATCAAG.......................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TTTCTATTCCTTTGCA---------------------------------------------------------------------------------------------------ACT---------G------..............................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AATGAAGCCCAAGATTTGGCTGT.............2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TGAAGCCCAAGATTTGGCTGTACAA.........2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAGACACACTTTGGAGCAATTGGCAT..............................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTTGGCTGTACAAGAACAAGG.2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTTGGAGCAATTGGCATCA............................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACACACTTTGGAGCAATT...................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATTGAGACACACTTTGG..........................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGCAGGACATTGAGACACACT..............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................GCAATTGGCATCATCAAG.......................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACACACTTTGGAGCAATTGG.................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTGGCTGTACAAGAACAAGGA2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AGAAAGACAAGCGTACAATGAAGCC...........................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................TTAACCTTTGTATCTTTCTAT.............................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGACATTGAGACACACTTTGGAG........................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AGAAAGACAAGCGTACAATGAAG.............................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACACACTTTGGAGCAATTGGCATCA............................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAGCAGGACATTGAGACACA................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TCTAACAACAGAAAGACA...........................................1811.001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTGAGACACACTTTGGAGCA......................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ATTTGGCTGTACAAGAACAAGG.2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TACAATGAAGCCCAAGATTTGGCTGTA............2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACACACTTTGGAGCAATTGGCAT..............................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACTTTGGAGCAATTGGCATC.............................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACACTTTGGAGCAATTGGCATCATCAA........................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACACACTTTGGAGCAATTGGC................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CAATGAAGCCCAAGATTTGGCTGTACAC.........2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GCAAGTAG-------------------------------------TA---ATG-TATTTTA..........................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GTACAATGAAGCCCAAGATTTG..................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTTGGCTGTACAAGAACAAG..2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCACCGAGCAGGACATTGAGACAC.................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CCCAAGATTTGGCTGTACAAGAACAAGGA2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGACATTGAGACACACTTTGGAGCAATC...................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CTTTCTATTCCTTTGCA---------------------------------------------------------------------------------------------------AC...............................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AAGCGTACAATGAAGCCCAAG.......................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................ACACTTTGGAGCAATTGGCATCATCAAGA......................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AGATTTGGCTGTACAAGAAC.....2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTCCTTTGCA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAAC.......................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACACTTTGGAGCAATTGGCAA..............................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAATTGGCATCATCAAGGCAA...................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............CATTGAGACACACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTCCTTTGCA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAACAACA...................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGTACAATGAAGCCCAAGATTTG..................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CACTTTGGAGCAATTGGC................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGAGACACACTTTGGAG........................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGAGACACACTTTGGAGCA......................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCACCGAGCAGGACATTGAGACACAC...............................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACATTGAGACACACTTTGGAGCAA.....................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................GAAGCCCAAGATTTGGCTGTAC...........2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGACAAGCGTACAATGAAG.............................1911.001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AATGAAGCCCAAGATTTGGCTGTAC...........2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GTACAATGAAGCCCAAGAT.....................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TAACAACAGAAAGACAAGCGT......................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......GCAGGACATTGAGACACAC...............................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............TTGAGACACACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GATTTGGCTGTACAAGAACAAGGA2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ATTTGGCTGTACAAGAACAA...2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACACTTTGGAGCAATTGGCATC.............................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CAAGATTTGGCTGTACAAGAA......2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AATGAAGCCCAAGATTTGGCTGTACA..........2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CACTTTGGAGCAATTGGCATCATCAA........................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....GAGCAGGACATTGAGACACACTTTGGA.........................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACACTTTGGAGCAATTGGC................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................GAGACACACTTTGGAGCAATTGG.................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GACAAGCGTACAATGAAGCCCAAGA......................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CCTTTGCA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAACAAC....................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACACACTTTGGAGCAATTGGCATCATCA.........................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GAAAGACAAGCGTACAATGAAG.............................2211.001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CTTTGCA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAACAAC....................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CATCATCAAGGCAAGTAG-------------------------------------TA---A....................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TACAATGAAGCCCAAGATTTGGCTGT.............2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................CATCAAGGCAAGTAG-------------------------------------TA---ATG-.................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGCCCAAGATTTGGCTGTAC...........2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACTTTGGAGCAATTGGCATCATCAAG.......................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........GACATTGAGACACACTTTGGAGCAAT....................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................AGACACACTTTGGAGCAATTA..................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............CATTGAGACACACTTTGGAGCAAT....................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGAGACACACTTTGGAGCAATT...................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CTTTGCA---------------------------------------------------------------------------------------------------ACT---------G------ATCTAACAACAG..................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CAAGCGTACAATGAAGCCCAAGATT....................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AGAAAGACAAGCGTACAATG................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................GGAGCAATTGGCATCATCAAGGCA....................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TG-TATTTTATGTATCTG--TAGC---TAC-.....................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCACCGAGCAGGACATTGAGACTCACTTTGGAGCCATTGGCATCATCAAGGCAAGTAG-------------------------------------TA---ATG-CATTTTAGGTCTCTG--TAGC---TAC-GTTTTAACCATTGTATCTTTGTATCCCTTTGCAACTTTGGAATC-------------------------------------------------------------------------------------------------------------CCAACAACAGAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................AGACTCACTTTGGAGCCATTGGCATC.............................................................................................................................................................................................................................................................................................................2615.00500500000000000000
...............TTGAGACTCACTTTGGAGCCATTGGCA...............................................................................................................................................................................................................................................................................................................2711.00100000000010000000
......................TCACTTTGGAGCCATTGGCA...............................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.................................................................................................................................................................................................................................................................................................................GTACAATGAAGCCCAAG.......................1711.00100000000001000000
.........AGGACATTGAGACTCACTTTGGAGCCAT....................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
....CGAGCAGGACATTGAGACTCACTT.............................................................................................................................................................................................................................................................................................................................2411.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................GCCCAAGATTTGGCTGTACAAGAACAA...2711.00100000000010000000
............................................................................................................................................................................................................................................................................................................................CCCAAGATTTGGCTGTACAAGAACAA...2611.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................AGCCCAAGATTTGGCTGTACAAGAACAA...2811.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................GATTTGGCTGTACAAG........1611.00100000010000000000
.....................................................................................................................................................................................................................................................................................................AGAAAGACAAGCGTACAATGAAGCCCA.........................2711.00100000000000010000
...............................................................................................................................................................................................................................................................................................................................AAGATTTGGCTGTACAAGAACA....2211.00100001000000000000
........................................................................................................................................................................................................................................................................................................AAGACAAGCGTACAATGAAGCCCAAG.......................2611.00100000000000010000
..............ATTGAGACTCACTTTGGAGCCATTGGCAT..............................................................................................................................................................................................................................................................................................................2911.00101000000000000000
.............CATTGAGACTCACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...........................TTGGAGCCATTGGCATCATCAAGA......................................................................................................................................................................................................................................................................................................2411.00100000000001000000
........................................................................................................................................................................................................................................................................................................AAGACAAGCGTACAATGAA..............................1911.00100010000000000000
................TGAGACTCACTTTGGAGCCATTGGCA...............................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................AATGAAGCCCAAGATTTGGCTGTAC...........2511.00100100000000000000
.....GAGCAGGACATTGAGACT..................................................................................................................................................................................................................................................................................................................................1811.00100000010000000000
...........GACATTGAGACTCACTTTGGAGCCA.....................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
droSec2
CCACCGAGCAGGACATTGAGACTCACTTTGGAGCCATTGGCATCATCAAGGCAAGTAG-------------------------------------TA---ATG-TATTTTAGGTCTCTG--TAGC---TAC-GTTTTAACCTTTGTATCTTTGTATCCCATTGCA---------------------------------------------------------------------------------------------------ACT---------G------ACCCAACAACAGAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..............................................................................................................................................................................................................................................................................................................AGCGTACAATGAAGCCCAAGATTTGGC................2711.0010001
................TGAGACTCACTTTGGAGCCAT....................................................................................................................................................................................................................................................................................................................2111.0010001
droYak3
CCACCGAGCAGGATATTGAAACTCACTTTGGAGCGATTGGAATCATCAAGGCAAGTAG-------------------------------------TCATC---ACATT--ATCCGTCTG--TAGA---CAC-GTTTTAACATTTGAATCGTTCTATCCTTTTTCA---------------------------------------------------------------------------------------------------TCT---------G------ACT---TAACAGAAAGATAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGCACAAGGASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.................GAAACTCACTTTGGAGCGATTGGAAT..............................................................................................................................................................................................................................................................................................................26121.0021000000000021
......................................................................................................................................................................................................................................................................................................................ATGAAGCCCAAGATTTGGCTGTACA..........2512.00210100000000
..................AAACTCACTTTGGAGCGATTGGAATC.............................................................................................................................................................................................................................................................................................................2612.00200200000000
...............................................................................................TCATC---ACATT--ATCCGTCTG--TAGA---CAC-GT...................................................................................................................................................................................................................2811.00110000000000
................................................................................................CATC---ACATT--ATCCGTCTG--TAGA---CA.......................................................................................................................................................................................................................2411.00110000000000
..............ATTGAAACTCACTTTGGAGCGATT...................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................TTTGGAGCGATTGGAATC.............................................................................................................................................................................................................................................................................................................1811.00100100000000
droEre2
CCACCGAGCAGGATATTGAGACTCACTTTGGAGCAATTGGAATCATCAAGGCAAGTAA-------------------------------------ACATGATG-CATG--ATGTGTATG--TCGA---AAC-GTTTTAACCTTTGTATCTTTGTATCCCATTGCA---------------------------------------------------------------------------------------------------TCT---------G------ATT---TAACAGAAAGACAAGCGTACTATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..............ATTGAGACTCACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................2011.0010100000
............................................................................................................................................................................................................................................................................................................CAAGCGTACTATGAAGCCCAAGATT....................2511.0011000000
......................................................................................................................................................................................................................................................................................................GAAAGACAAGCGTACTATGAAGC............................2311.0010100000
...............TTGAGACTCACTTTGGAGCAATTGGAATC.............................................................................................................................................................................................................................................................................................................2911.0010100000
......AGCAGGATATTGAGACTCACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................2811.0010100000
................TGAGACTCACTTTGGAGCAATTGG.................................................................................................................................................................................................................................................................................................................2411.0011000000
.............................................................................................................................................................................................................................................................................................................AAGCGTACTATGAAGCCCAA........................2011.0011000000
...................GACTCACTTTGGAGCAATTGGAAT..............................................................................................................................................................................................................................................................................................................2411.0011000000
...........................................................................................................................................................................................................................................................................................................................GCCCAAGATTTGGCTGTACAAGA.......2311.0010100000
......................TCACTTTGGAGCAATTGGAATC.............................................................................................................................................................................................................................................................................................................2211.0010001000
...........GATATTGAGACTCACTTTGGAGCA......................................................................................................................................................................................................................................................................................................................2411.0010000100

Generated: 10/20/2015 at 11:02 PM