ID:

dmo_448

 Coordinate:

scaffold_6308:3015128-3015226 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.7 -40.6 -40.5

Flybase annnotation

exon [dmoj_GLEANR_10839:2]; CDS [Dmoj\GI10907-cds]; CDS [Dmoj\GI10907-cds]; exon [dmoj_GLEANR_10839:3]; intron [Dmoj\GI10907-in]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy-
mature
  1. scaffold_6308:1145978-1145999 +
  2. scaffold_6308:2506065-2506086 -
  3. dmo_448  scaffold_6308:3015180-3015201 -
  4. scaffold_6473:160146-160167 -
  5. scaffold_6473:11173738-11173759 +
  6. scaffold_6473:15130740-15130761 -
  7. scaffold_6496:4563314-4563335 -
  8. scaffold_6500:663198-663219 -
  9. scaffold_6500:21412152-21412173 -
  10. scaffold_6540:2704366-2704387 -
  11. scaffold_6540:19831226-19831247 -
  12. scaffold_6540:26359817-26359838 -
  13. scaffold_6680:6926298-6926319 +
  14. scaffold_6680:10131859-10131880 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------##################################################
ATGTGGCCGCCGACCTGTCCATCAAGAAGATCAAGCTCAAGGAGGAGGATGTGGATGCAGTGGCAGCTGCGGCGGCAGCAGCAGCCGCAGCAGCCGCAGTCACAGCCGCAGCCGCAGTAATAGGAACAGATGCGCCATTGGCCGCCCAGCTGGACGCAACAGCCAAAGAAGCCGAGGTGTTAACCGGCTCCACAGAGTC
**************************************************((((.(((...(((.((((((((.((....)).)))))))).)))))).)))).((((....((((..............))))....)))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
 M060
embryo
 V049
head
..........................................................AGTGGGAGCTTCGGCGCCAG......................................................................................................................... 20 3 6 2.17 13 11 2 0 0 0
...........................................................................................................GCAGCCGCGGTAATACGA.......................................................................... 18 2 4 1.75 7 5 1 1 0 0
...........................................................GTGGGAGCTTCGGCGCCAG......................................................................................................................... 19 3 20 1.20 24 17 6 0 0 1
...........................................................................................................GCAGCCGCGGTAATACGAA......................................................................... 19 2 3 1.00 3 2 1 0 0 0
.........................................................................................................CCGCAGCCGCGGTAATACGA.......................................................................... 20 2 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................CAAAGAAGCCGAGGTGTTAACCGGC........... 25 0 1 1.00 1 1 0 0 0 0
............................................................................................................CAGCCGCGGTAATACGAA......................................................................... 18 2 6 0.83 5 1 2 2 0 0
.....................................CAAGGAGGAGGATGTGGA................................................................................................................................................ 18 0 2 0.50 1 0 1 0 0 0
..........................................................AGTGGGAGCTTCGGCGTCAG......................................................................................................................... 20 3 6 0.33 2 2 0 0 0 0
.........................................................CAGTGGGAGCTTCGGCGCCA.......................................................................................................................... 20 3 10 0.20 2 2 0 0 0 0
..................................................................................................................................TGCGCTAATGGCCGCCCA................................................... 18 2 6 0.17 1 1 0 0 0 0
...........................................................................CAGCAGCAGCCGCAGCAGCCGC...................................................................................................... 22 0 14 0.14 2 0 0 0 2 0
.............................................GGGATGTGGGTGCAGTGGGA...................................................................................................................................... 20 3 9 0.11 1 0 1 0 0 0
.....................................CAAGGACGATGATGTGGAT............................................................................................................................................... 19 2 14 0.07 1 0 1 0 0 0
...........................................................GTGGGAGCTTCGGCGTCAG......................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

TACACCGGCGGCTGGACAGGTAGTTCTTCTAGTTCGAGTTCCTCCTCCTACACCTACGTCACCGTCGACGCCGCCGTCGTCGTCGGCGTCGTCGGCGTCAGTGTCGGCGTCGGCGTCATTATCCTTGTCTACGCGGTAACCGGCGGGTCGACCTGCGTTGTCGGTTTCTTCGGCTCCACAATTGGCCGAGGTGTCTCAG
**************************************************((((.(((...(((.((((((((.((....)).)))))))).)))))).)))).((((....((((..............))))....)))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V041
embryo
 V049
head
...................................................................................................AGTGTCGGCGTCGGCGTCATC............................................................................... 21 1 2 0.50 1 1 0 0 0
...................................................................................................................................CACGGAAACCGGCGGGTC.................................................. 18 2 6 0.17 1 0 1 0 0
................................................................................................................................................................TCGGTTTCTTCCGACCCACA................... 20 3 9 0.11 1 0 0 1 0
.............................................................................................GGCGTCAGTGTGGGCGTG........................................................................................ 18 2 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6308:3015078-3015276 - dmo_448 ATGTGGCCGCCGACCTGTCCATCAAGAAGATCAAG---CTCAAGGA--GGA---------------------------GGATGTGGATGCAGTGGCAGC---------------------------------TGCGGCGGCAGCAGCA---------GCC-----------------------------------------------------------------GCAGCAGCCG------------------CAGTCACAGCCGCAGCCGCAGTAATAGGAACAGATG-CGCCATT------------------------------GGCCGCCCAGCTGGACG---CAACAG-------------------CCAA---AGA---AGCCGAGGT----------G-------TTAACCGGCTCC---------AC-----------------------------------AGAGTC
droVir3 scaffold_12472:455910-456054 + ACGTGGCCGCCGACCTGTCCATTAAGAAGATCAAG---CTCAACGA--CGA---------------------------AG------CCGA------------------------------------------TACGG---------------------------------AGGCA-------------------------GCGGAT----------------------------------------------------------------------------ATAGATG-CGCCTCG------------------------------AAGAGCGCAACTGGGCGCCGCCACAG-------------------CCAA---AGA---AACCGAGGT----------G-------TTAACCAGCTC---------CAC-----------------------------------TGAGTC
droGri2 scaffold_15203:4500925-4501066 - ATGTGGCCGCCGATTTGTCAATCAAGAAGATCAAG---CTTGGCGA--CG------------------------------------ATACCGA---------------------------------------AACGG--------------------------------------------------------------------------------------------------------------------------------------AAGCAGACGAAACGGATA-CGCCGCT------------------------------GGCTGCCCAGCTGGGCG---CAACAG-------------------CCAA---AGA---AGCCAAGGT----------G-------CTACCTAGCTC---------CAG-----------------------------------TGAGTC
droWil2 scf2_1100000004514:943661-943794 + GCAG--TCGAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAGGCTAA-----------------GGCAGCGGCTGC------------------------CGCGGCA-----------------GCTGCGGC------------GGCGGCGGCAGCAGCAGCGGCCG------------------CAACCGC------------TGC----------------------CGCCGC------------------TGCACA------------------------AG-------------------CCAA------TGCGGCA---G---------------------------------CTCCATCATC------------------------------------CACC
dp5 XL_group3b:102168-102376 + GTG--GCTGTGGAGCTGGCCGTGAAGAA---CGAGATTGTCAAGCACG-----------------------------------TG-GTGCAGCAGCATC------AGC------------------AGCAGCAACAGCAGCAACAAC---------------AGCAGCAACAACA-----------------GCAGCA------------------------------------------ACAACAGCAGCAACAAC------------------------AGCAGCAA----------CAAC---------------------------------------------AGCAG-------------------CCACAG---C---AGCAACAGCAGGC------CACAGCGG----------CG----GCAGCAGCG----AGCGTGCACAAGTTCATCGACGAACTGACAAAGTC
droPer2 scaffold_22:571720-571894 + ATGTGGCCGCCGATCTCTCCATCAAGAAGATTCGA---TTGGGCGG--CG---------------------------------------CG---------------ACGGATGGATGTGTGGTGGCAGGAGCAGCAGGAGCAGGCGCCACAGCAAAAG---------------------G--------------AGC---------------GAGG-----------------------------------------------------------------------------------------------------------------------------------------GAGGAGCACGCTTCATCAGCCAA---AGA---AACGGAAATGGG-------G-------CTCACGAGCTCCAGCTCCAGCAG-----------------------------------CGAGTC
droAna3 scaffold_13337:9981889-9982058 + CCAAC------------------AAGAAGAGGGGT---CCCAAGGA--CGA---------------------------AG------CCGCCGA---------------------------------------GGCGGAGGAGGC------------------------CAAGGCA-----------------GCGGAGGA------------GAAG---------GCAGCTGCCG------------------CCGCCGCTGCAGCAGC---CGC----------------------AGCCAAGAAGGAAAAAGAGGAGGCTGTGAA---GGACAGCTGGGATG---CCACAG-------------------ACAG---CGA---GGCA---------------------------------------GAGCCCG------------------------------------AGCCA
droBip1 scf7180000395165:16087-16243 - CCACC------------------AAATACTTTGAG---GACGAGCA--------------------GCGCGAGGCGGACT-------TGCAGCAGCACC---------------------------TCCAGCAACAACAGCAGCAGCAACAGCAACAG---------------------C--------------AGC---------------AGCA------------------------G---------CAGCAGC---------------AACAACAACAACAGCAG----------CAGC------------------------------------------------AG-------------------C------------AACA-----------------------GCAACGAGATG---CAGCAAAGGAAAT-------------------------------GGCCGA
droKik1 scf7180000302544:262536-262683 - AGCTTGAA------------------------------------------------------------------------------GAGAAGCAGCTAC---AGCT------------------------GCAGCAGCAACAGC---------AGCAGCAGCAGCAACAGCAGCA-------------------------GCAGCAACAACA----------------------GCAGCAACAACAACAACAACAGC---------------AGC----------------------AGCAGC------------------AGC------------------------AACAA-------------------CCAC---AGC---AGCAGCAA---------------------------------CACCAACAGCAGCC------------------------------ACAGCT
droFic1 scf7180000454072:3007340-3007524 + GCGCCGTCTACAACTTGTACAAGGTGAAGTACAAG---AA--------------------------GCACAAGAAGACCA-------ACCAGAAGCAGCAGCAGCA------------------------GCAGCAGCAACAGC---------AGCAGCAGCAGCAACA-----------------------CCAGCA--ACAGCAGCAGCA----------------------GCAGCA------------------------------GGCCCAACAGCAACACCAGC-------AGCAGC------------------TGCACT------------------------CG-------------------CCGC------------T---G---------------------------------CACCACCACCACCAC-----------------------------CAGAGC
droEle1 scf7180000491277:524440-524606 - TGGCT---GCAGACCTGC-----GAGATGTGCGAG---GCCAAGCC--------------------------------------G-GAGCAGCAGCAAC------AGCAA------------------CTCCAGCAGCAGCAGCAGC---------------AGCACCATCTGCA-------------------------GCAGCTGCAGCT----------------------GCAGCAGCAGCA------GCAC------------------CATCTGCAGC-------------AGCTGCAGCTGC------------AG-------------------------------------------------CAGC---AGCAGCAGTC---G---------------------------------CAGCAACAGCA------------------------------------GGC
droRho1 scf7180000780059:33079-33273 - ATCGGGCGGCCAACTACGCCTTCGACATATCCAAG---ATCTATGG--GGC---------CCAGCA-----------A-C------ATGCAGCGGC-CC---------------------ACCACCAGCAGCAACAGCAACAACAGC---------------------AGCAGCA-----------------GCAACAGC------------AGCA------------------------------------------------------GCAGCAACAGCAACAGCAGC-------AACAGT------------------------TGCTGCTCAGCGG--------GGGAG------GGGG---------CAGCGGTGGG---GGCGGTAGT----------G-------CCAGTTCGC-------------------------------------------------ACAACA
droBia1 scf7180000301760:3651075-3651241 + ACGACGCCCCCACCCCGCCCATCCACGAGGTCCAC---TGCGAC------------------------------------------GTGCAGCAGCTGC---AGCT------------------------ACTGCAGCAGCAGCAACT---------GCAGCAGCAGCAGCAGCAACAGC--------------AGC---------------ATCA------------------------------------------------------GCCGCAACAGCAACAGCAAC-------ATCAGC------------------------------------------------TG-------------------CTGC------TGCAGCA---G---------------------------------GAGCAACTGCAGCTG-----------------------------ATGAAG
droTak1 scf7180000414393:29142-29315 - CCGTGGCCGTGGAGCTGGCCGTCAAGAA---CGAGATTGTCAAGCATG-----------------------------------TG-GTGCAGCAGCATC------AGCAGATGCAGGAGCAAATGCAGGAGCAGCAGCAGCAGCAGCAACAGCAACAG---------------------C--------------AGC---------------AACA------------GCAGCAG------------------CAACAGC------------AGC---------AG-------------CAGC------------------AGC---------------------------AA-------------------CCCC------AGCAGCA---A---------------------------------CAGCAACAGCA-------------------------------------GC
droEug1 scf7180000409184:208025-208185 - ACGCCGCAGTG--------CAGCAAGTTGAGTTGT---CTGGA-GC--CGAAGGAGCTACTGGGCA-----------T-G------TTGCAGCAGCAGC---------------------------AGCAGC------------------------------------AACAGCA-------------------------GCAGCAACAGCA----------------------GCAGCAGCAGGC------GCAACAAC---------AGCAGCAACAGCAGCAGCA-------------G----------------------------------------------------------------------GCGC---AACAGCAGCA---A---------------------------------CAGCAACAGA------------------------------------ATCC
dm3 chr3R:8830080-8830260 + AAGAGT--GCC---AAGGC------------CAAG---AAGAAAGA--GGC---------TAAGCG-----------A-G------CTGCCGC---------------------------------------GGCGGCAGCAGC------------------------AGAAGCA-----------------GCAGC---------------TGCG---------------GCCGAGGCAGCTGCA------GCGGCAGC---------------AG----------------------CAGA------------------------AGCTGC--GGCG--------------GAGCAAAAAGCCA----AGCTAAAG---A---ACAAGAAGCAGGCGAAGAAGACAGCCG----------TG----GCTGTGGCC----ACCGCC-------------------------TCCA
droSim2 2r:4467936-4468144 - TGGCCGCCCAGGTGCTCTTCAACAAGCAGGAGAAG------------------------------------------------------CAGCAGCAGC------AGCAGGCCCAGGAGAAGTACCAGCAGCAACAGCAGCAGCAGCATCAGCAAAAC---------------------C--------------AGC---------------AGCA------------------------G---------CAGCACCAGC---------AGCAGCAACAGCAGCAGCGT-CAGCATC------------------------------AGTTCCTTGACCCAGCG---CAGCAG-------------------CAACAG---C---AGCAGCAGCAGA-------CACAGACG----------CA----ACAGCAGCA-----------------------------------GCCG
droSec2 scaffold_1:1283285-1283461 - CAGCAGCAG-----------------------------------------------------------------------------------------C------AGCAGGCCCAGGAGAAGTACCAGCAGCAACAGCAGCAGCAGCATCAGCAAAAC---------------------C--------------AGC---------------AGCA------------GCAGCAG------------------CACCAGC---------AGCAGCAACAGCAGCAGCGT-CAGCATC------------------------------AGTTCCTTGACCCAGCG---CAGCAG-------------------CAACAG---C---AGCAGCAGCAGA-------CACAGACG----------CA----ACAGCAGCA-----------------------------------GCCG
droYak3 3R:27540436-27540611 - TGGA-GCCGCCGTCCTATGC--CAAGAG---CATG---CA--------------------------GGCCAAGGCGGCCACGGTG-GTGCAGCAGCAGC---------------------------AGCAGCAACAGCAGCAGGTGCAGCAGCAACAG---------------------C--------------AGG---------------TGCA------------------------G---------CAGCAGCAGC---------AGGTGCAACAGCAGCAGCAGC-------AACAAC------------------------------------------------AC-------------------CTCC------AGCAGCA---G---------------------------------CAGCAACTGCAGGCG-----------------------------TTGAGG
droEre2 scaffold_4929:12168752-12168929 - ATATCGCCGCTGGCTCA-------------------------------------------------------------------G-GTGCAGCAGCAGC---AGCAACAGCT------------------CCAGC---AGCTGCAGCAACAGCAGTTCCAGCAGCAACAGCAGCA-----ACAGCTGCAACAGCAGCAGC------------AGCA------------------------G------CAGCAGCAGCAGC---------AGCTGCAACAGCAGCAGCA-------------GC------------------AGCAGC------------------------AG-------------------CAAC------AACAGCA---G---------------------------------CAGCAACAGG----------------------------------CAGCTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATGTGGCCGCCGACCTGTCCATCAAGAAGATCAAG---CTCAAGGA--GGA---------------------------GGATGTGGATGCAGTGGCAGC---------------------------------TGCGGCGGCAGCAGCA---------GCC-----------------------------------------------------------------GCAGCAGCCG------------------CAGTCACAGCCGCAGCCGCAGTAATAGGAACAGATG-CGCCATT------------------------------GGCCGCCCAGCTGGACG---CAACAG-------------------CCAA---AGA---AGCCGAGGT----------G-------TTAACCGGCTCC---------AC-----------------------------------AGAGTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................CAA---AGA---AGCCGAGGT----------G-------TTAACCGGC.......................................................2511.001100000
........................................CAAGGA--GGA---------------------------GGATGTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................1820.501000001
............................................................................................................................................CAGCAGCA---------GCC-----------------------------------------------------------------GCAGCAGCCG------------------C..............................................................................................................................................................................................................................22140.142000020
droVir3
ACGTGGCCGCCGACCTGTCCATTAAGAAGATCAAG---CTCAACGA--CGA---------------------------AG------CCGA------------------------------------------TACGG---------------------------------AGGCA-------------------------GCGGAT----------------------------------------------------------------------------ATAGATG-CGCCTCG------------------------------AAGAGCGCAACTGGGCGCCGCCACAG-------------------CCAA---AGA---AACCGAGGT----------G-------TTAACCAGCTC---------CAC-----------------------------------TGAGTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................CCGCCACAG-------------------CCAA---AGA---AACCGAGG...................................................................................2411.001000000000000000000000000000000000000000000000000000000100000000
droGri2
ATGTGGCCGCCGATTTGTCAATCAAGAAGATCAAG---CTTGGCGA--CG------------------------------------ATACCGA---------------------------------------AACGG--------------------------------------------------------------------------------------------------------------------------------------AAGCAGACGAAACGGATA-CGCCGCT------------------------------GGCTGCCCAGCTGGGCG---CAACAG-------------------CCAA---AGA---AGCCAAGGT----------G-------CTACCTAGCTC---------CAG-----------------------------------TGAGTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GCAG--TCGAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAGGCTAA-----------------GGCAGCGGCTGC------------------------CGCGGCA-----------------GCTGCGGC------------GGCGGCGGCAGCAGCAGCGGCCG------------------CAACCGC------------TGC----------------------CGCCGC------------------TGCACA------------------------AG-------------------CCAA------TGCGGCA---G---------------------------------CTCCATCATC------------------------------------CACCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........GAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAGGC............................................................................................................................................................................................................................................................................................................................................................................2512.00202000
........GAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACA...............................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.............................................................................................AGCAAC------AACAGGCTAA-----------------GGCAGCGC................................................................................................................................................................................................................................................................................................................................................2411.00100010
..............GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAGGCT...........................................................................................................................................................................................................................................................................................................................................................................2311.00101000
..AG--TCGAC---GGATT----------------------------------------------------------------------CAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..........................................................................................................................................................................................................................................G------------------CAACCGC------------TGC----------------------CGCCGC------------------TGCACA------------------------.............................................................................................................................2311.00101000
...............GATT----------------------------------------------------------------------CAGCAGCAAC------AACAGGCTAA-----------------GG......................................................................................................................................................................................................................................................................................................................................................2611.00100010
...........................................................................................GCAGCAAC------AACAGGCTAA-----------------GGCAGC..................................................................................................................................................................................................................................................................................................................................................2411.00101000
.................TT----------------------------------------------------------------------CAGCAGCAAC------AACAGGCTAA-----------------GG......................................................................................................................................................................................................................................................................................................................................................2411.00101000
.........AC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAGGC............................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.......CGAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAGGCT...........................................................................................................................................................................................................................................................................................................................................................................2711.00100010
......TCGAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAGG.............................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.............................................................................................AGCAAC------AACAGGCTAA-----------------GGCAGCGGC...............................................................................................................................................................................................................................................................................................................................................2511.00101000
........GAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AAC................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
........GAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAG..............................................................................................................................................................................................................................................................................................................................................................................2311.00101000
......TCGAC---GGATT----------------------------------------------------------------------CAGCAGCAAC------AACAGGC............................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.................................................................................................................................................................................................................................................................................................................................TGCACA------------------------AG-------------------CCAA------TGCGGC........................................................................................1820.50101000
.................................................................................................................................................................................................................................................................................................................................TGCACA------------------------AG-------------------CCAA------TGCGGCA---G---------------------------------CTCCATCA..........................................2820.50101000
................................................................................................................................................................................................................................................................CCGC------------TGC----------------------CGCCGC------------------TGCAC......................................................................................................................................................18200.05100010
dp5
GTG--GCTGTGGAGCTGGCCGTGAAGAA---CGAGATTGTCAAGCACG-----------------------------------TG-GTGCAGCAGCATC------AGC------------------AGCAGCAACAGCAGCAACAAC---------------AGCAGCAACAACA-----------------GCAGCA------------------------------------------ACAACAGCAGCAACAAC------------------------AGCAGCAA----------CAAC---------------------------------------------AGCAG-------------------CCACAG---C---AGCAACAGCAGGC------CACAGCGG----------CG----GCAGCAGCG----AGCGTGCACAAGTTCATCGACGAACTGACAAAGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGGC------CACAGCGG----------CG----GC..............................................2312.0020100100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGACGAACTGACAAAGT.2011.0010000001000
..................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGGC------CACAGCGG----------C.....................................................2111.0010010000000
...........................................................................................................................................................................................................................................................................................CAGCAA----------CAAC---------------------------------------------AGCAG-------------------CCAC....................................................................................................1950.2010000100000
.....................................................................................................................................................................................................................................................AGCAGCAACAAC------------------------AGCAGCA............................................................................................................................................................................................19200.1530300000000
..............................................................................................................................................................................A-----------------GCAGCA------------------------------------------ACAACAGCAGCA................................................................................................................................................................................................................................19200.1530300000000
..................................................................................................................................................................AGCAGCAACAACA-----------------GCAGCA------------------------------------------............................................................................................................................................................................................................................................19200.1530300000000
......................................................................................................................................................................................................................................................GCAGCAACAAC------------------------AGCAGCAA----------C................................................................................................................................................................................20200.1020200000000
........................................................................................................................................GCAGCAACAAC---------------AGCAGCAAC.................................................................................................................................................................................................................................................................................................................20200.1020200000000
................................................................................................................................................................................................GCAGCA------------------------------------------ACAACAGCAGCAAC..............................................................................................................................................................................................................................20200.1020200000000
...................................................................................................................................................................GCAGCAACAACA-----------------GCAGCA------------------------------------------AC..........................................................................................................................................................................................................................................20200.1020200000000
.................................................................................................................................................................................................................................................CAACAGCAGCAACAAC------------------------AGCAGCAA----------CAAC---------------------------------------------................................................................................................................................28110.0910100000000
...............................................................................................................................................CAAC---------------AGCAGCAACAACA-----------------GCAGCA------------------------------------------ACAAC.......................................................................................................................................................................................................................................28110.0910100000000
...................................................................................................................................CAACAGCAGCAACAAC---------------AGCAGCAACAAC..............................................................................................................................................................................................................................................................................................................28110.0910100000000
..........................................................................................................................................................................CAACA-----------------GCAGCA------------------------------------------ACAACAGCAGCAACAAC------------------------...................................................................................................................................................................................................28110.0910100000000
.....................................................................................................................................ACAGCAGCAACAAC---------------AGCAG.....................................................................................................................................................................................................................................................................................................................19200.0510100000000
............................................................................................................................................................................................................................................................ACAAC------------------------AGCAGCAA----------CAAC---------------------------------------------AGC.............................................................................................................................20200.0510100000000
...............................................................................................................................................CAAC---------------AGCAGCAACAACA-----------------GCAGCA------------------------------------------............................................................................................................................................................................................................................................23200.0510000100000
.....................................................................................................................................ACAGCAGCAACAAC---------------AGCAGCAAC.................................................................................................................................................................................................................................................................................................................23200.0510001000000
..............................................................................................................................................ACAAC---------------AGCAGCAACAACA-----------------GC..........................................................................................................................................................................................................................................................................................20200.0510100000000
.............................................................................................................................................................................CA-----------------GCAGCA------------------------------------------ACAACAGCAGCAACA.............................................................................................................................................................................................................................23200.0510100000000
...............................................................................................................................................CAAC---------------AGCAGCAACAACA-----------------GC..........................................................................................................................................................................................................................................................................................19200.0510100000000
.................................................................................................................................................AC---------------AGCAGCAACAACA-----------------GCAGCA------------------------------------------AC..........................................................................................................................................................................................................................................23200.0510001000000
.............................................................................................................................................................................................................................................................CAAC------------------------AGCAGCAA----------CAAC---------------------------------------------AGC.............................................................................................................................19200.0510100000000
..................................................................................................................................................................................................AGCA------------------------------------------ACAACAGCAGCAACAAC------------------------A..................................................................................................................................................................................................22200.0510100000000
............................................................................................................................................................................ACA-----------------GCAGCA------------------------------------------ACAACAGCAG..................................................................................................................................................................................................................................19200.0510100000000
...................................................................................................................................................................................................................................................ACAGCAGCAACAAC------------------------AGCAG..............................................................................................................................................................................................19200.0510100000000
.................................................................................................................................................................................................................................................CAACAGCAGCAACAAC------------------------AGC................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................CAACA-----------------GCAGCA------------------------------------------ACAACAGCAGCA................................................................................................................................................................................................................................23200.0510000100000
.........................................................................................................AGC------------------AGCAGCAACAGCAGCAA.............................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...............................................................................................................................................................................................................................................................AC------------------------AGCAGCAA----------CAAC---------------------------------------------AGCAG-------------------C.......................................................................................................20200.0510100000000
........................................................................................................................................................................................................................................................AGCAACAAC------------------------AGCAGCAA----------CAAC---------------------------------------------A...............................................................................................................................22200.0510100000000
.......................................................................................................................................................................................................................................................CAGCAACAAC------------------------AGCAGCAA----------CAA..............................................................................................................................................................................21200.0510100000000
..........................................................................................................GC------------------AGCAGCAACAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................20200.0510001000000
............................................................................................................................................................................ACA-----------------GCAGCA------------------------------------------ACAACAGCAGCAAC..............................................................................................................................................................................................................................23200.0510001000000
..............................................................................................................................AGCAGCAACAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................CAACA-----------------GCAGCA------------------------------------------ACAACAGC....................................................................................................................................................................................................................................19200.0510100000000
...................................................................................................................................................................................................................................................ACAGCAGCAACAAC------------------------AGCAGCAA----------C................................................................................................................................................................................23200.0510001000000
.................................................................................................................................................AC---------------AGCAGCAACAACA-----------------GCAGC.......................................................................................................................................................................................................................................................................................20200.0510100000000
...................................................................................................................................................................................................................................................ACAGCAGCAACAAC------------------------AGCAGC.............................................................................................................................................................................................20200.0510100000000
.................................................................................................................................................................................................CAGCA------------------------------------------ACAACAGCAGCAACAA............................................................................................................................................................................................................................21200.0510100000000
....................................................................................................................................................................................................................................................CAGCAGCAACAAC------------------------AGCAGCAA----------CA...............................................................................................................................................................................23200.0510100000000
............................................................................................................................................................................ACA-----------------GCAGCA------------------------------------------ACAACAGCAGC.................................................................................................................................................................................................................................20200.0510100000000
.....................................................................................................................................ACAGCAGCAACAAC---------------AGCAGC....................................................................................................................................................................................................................................................................................................................20200.0510100000000
................................................................................................................................................................................................................................................ACAACAGCAGCAACAAC------------------------AGC................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................CAGCAACAAC---------------AGCAGCAACAA...............................................................................................................................................................................................................................................................................................................21200.0510100000000
.................................................................................................................................................................................................................................................CAACAGCAGCAACAAC------------------------AGCAGCA............................................................................................................................................................................................23200.0510000100000
......................................................................................................................................CAGCAGCAACAAC---------------AGCAGCAACA................................................................................................................................................................................................................................................................................................................23200.0510100000000
.................................................................................................................................................AC---------------AGCAGCAACAACA-----------------GCAG........................................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................AGCAACAAC---------------AGCAGCAACAACA-----------------............................................................................................................................................................................................................................................................................................22200.0510100000000
...............................................................................................................................................................................................................................................................AC------------------------AGCAGCAA----------CAAC---------------------------------------------AGCAG-------------------........................................................................................................19200.0510100000000
.........................................................................................................AGC------------------AGCAGCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.....................................................................................................................................................................AGCAACAACA-----------------GCAGCA------------------------------------------ACAACA......................................................................................................................................................................................................................................22200.0510100000000
...................................................................................................................................CAACAGCAGCAACAAC---------------AGCAGCA...................................................................................................................................................................................................................................................................................................................23200.0510000100000
.........................................................................................................................................................................ACAACA-----------------GCAGCA------------------------------------------ACAACAGC....................................................................................................................................................................................................................................20200.0510100000000
....................................................................................................................................................................CAGCAACAACA-----------------GCAGCA------------------------------------------ACAA........................................................................................................................................................................................................................................21200.0510100000000
droPer2
ATGTGGCCGCCGATCTCTCCATCAAGAAGATTCGA---TTGGGCGG--CG---------------------------------------CG---------------ACGGATGGATGTGTGGTGGCAGGAGCAGCAGGAGCAGGCGCCACAGCAAAAG---------------------G--------------AGC---------------GAGG-----------------------------------------------------------------------------------------------------------------------------------------GAGGAGCACGCTTCATCAGCCAA---AGA---AACGGAAATGGG-------G-------CTCACGAGCTCCAGCTCCAGCAG-----------------------------------CGAGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CCAAC------------------AAGAAGAGGGGT---CCCAAGGA--CGA---------------------------AG------CCGCCGA---------------------------------------GGCGGAGGAGGC------------------------CAAGGCA-----------------GCGGAGGA------------GAAG---------GCAGCTGCCG------------------CCGCCGCTGCAGCAGC---CGC----------------------AGCCAAGAAGGAAAAAGAGGAGGCTGTGAA---GGACAGCTGGGATG---CCACAG-------------------ACAG---CGA---GGCA---------------------------------------GAGCCCG------------------------------------AGCCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................GTGAA---GGACAGCTGGGATG---.................................................................................................................................1911.001001000
...............................GGGT---CCCAAGGA--CGA---------------------------AG------CCGCCGA---------------------------------------........................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................................................................................GTGAA---GGACAGCTGGGATG---CC...............................................................................................................................2111.001000001
..................................................................................................................................................................................................................................................................................................................................GTGAA---GGACAGCTGGGATG---C................................................................................................................................2011.001000010
.......................................................................................................................................................................................................................................................................................................................AAGAGGAGGCTGTGAA---GGACAGCTGG........................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................GTGAA---GGACAGCTGGGATG---CCACAG-------------------AC......................................................................................................2711.001000010
.......................................................................................................................................................................................................................................................................................................................AAGAGGAGGCTGTGAA---GGAC..............................................................................................................................................2011.001100000
........................AGAAGAGGGGT---CCCAAGGA--CG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................CACAG-------------------ACAG---CGA---GGCA---------------------------------------GAGCCCG------------------------------------AGC..2611.001000010
droBip1
CCACC------------------AAATACTTTGAG---GACGAGCA--------------------GCGCGAGGCGGACT-------TGCAGCAGCACC---------------------------TCCAGCAACAACAGCAGCAGCAACAGCAACAG---------------------C--------------AGC---------------AGCA------------------------G---------CAGCAGC---------------AACAACAACAACAGCAG----------CAGC------------------------------------------------AG-------------------C------------AACA-----------------------GCAACGAGATG---CAGCAAAGGAAAT-------------------------------GGCCGASizeHit CountTotal NormTotal
No Reads
droKik1
AGCTTGAA------------------------------------------------------------------------------GAGAAGCAGCTAC---AGCT------------------------GCAGCAGCAACAGC---------AGCAGCAGCAGCAACAGCAGCA-------------------------GCAGCAACAACA----------------------GCAGCAACAACAACAACAACAGC---------------AGC----------------------AGCAGC------------------AGC------------------------AACAA-------------------CCAC---AGC---AGCAGCAA---------------------------------CACCAACAGCAGCC------------------------------ACAGCTSizeHit CountTotal NormTotal
No Reads
droFic1
GCGCCGTCTACAACTTGTACAAGGTGAAGTACAAG---AA--------------------------GCACAAGAAGACCA-------ACCAGAAGCAGCAGCAGCA------------------------GCAGCAGCAACAGC---------AGCAGCAGCAGCAACA-----------------------CCAGCA--ACAGCAGCAGCA----------------------GCAGCA------------------------------GGCCCAACAGCAACACCAGC-------AGCAGC------------------TGCACT------------------------CG-------------------CCGC------------T---G---------------------------------CACCACCACCACCAC-----------------------------CAGAGCSizeHit CountTotal NormTotal
No Reads
droEle1
TGGCT---GCAGACCTGC-----GAGATGTGCGAG---GCCAAGCC--------------------------------------G-GAGCAGCAGCAAC------AGCAA------------------CTCCAGCAGCAGCAGCAGC---------------AGCACCATCTGCA-------------------------GCAGCTGCAGCT----------------------GCAGCAGCAGCA------GCAC------------------CATCTGCAGC-------------AGCTGCAGCTGC------------AG-------------------------------------------------CAGC---AGCAGCAGTC---G---------------------------------CAGCAACAGCA------------------------------------GGCSizeHit CountTotal NormTotal
No Reads
droRho1
ATCGGGCGGCCAACTACGCCTTCGACATATCCAAG---ATCTATGG--GGC---------CCAGCA-----------A-C------ATGCAGCGGC-CC---------------------ACCACCAGCAGCAACAGCAACAACAGC---------------------AGCAGCA-----------------GCAACAGC------------AGCA------------------------------------------------------GCAGCAACAGCAACAGCAGC-------AACAGT------------------------TGCTGCTCAGCGG--------GGGAG------GGGG---------CAGCGGTGGG---GGCGGTAGT----------G-------CCAGTTCGC-------------------------------------------------ACAACASizeHit CountTotal NormTotal
No Reads
droBia1
ACGACGCCCCCACCCCGCCCATCCACGAGGTCCAC---TGCGAC------------------------------------------GTGCAGCAGCTGC---AGCT------------------------ACTGCAGCAGCAGCAACT---------GCAGCAGCAGCAGCAGCAACAGC--------------AGC---------------ATCA------------------------------------------------------GCCGCAACAGCAACAGCAAC-------ATCAGC------------------------------------------------TG-------------------CTGC------TGCAGCA---G---------------------------------GAGCAACTGCAGCTG-----------------------------ATGAAGSizeHit CountTotal NormTotal
No Reads
droTak1
CCGTGGCCGTGGAGCTGGCCGTCAAGAA---CGAGATTGTCAAGCATG-----------------------------------TG-GTGCAGCAGCATC------AGCAGATGCAGGAGCAAATGCAGGAGCAGCAGCAGCAGCAGCAACAGCAACAG---------------------C--------------AGC---------------AACA------------GCAGCAG------------------CAACAGC------------AGC---------AG-------------CAGC------------------AGC---------------------------AA-------------------CCCC------AGCAGCA---A---------------------------------CAGCAACAGCA-------------------------------------GCSizeHit CountTotal NormTotal
No Reads
droEug1
ACGCCGCAGTG--------CAGCAAGTTGAGTTGT---CTGGA-GC--CGAAGGAGCTACTGGGCA-----------T-G------TTGCAGCAGCAGC---------------------------AGCAGC------------------------------------AACAGCA-------------------------GCAGCAACAGCA----------------------GCAGCAGCAGGC------GCAACAAC---------AGCAGCAACAGCAGCAGCA-------------G----------------------------------------------------------------------GCGC---AACAGCAGCA---A---------------------------------CAGCAACAGA------------------------------------ATCCSizeHit CountTotal NormTotal
No Reads
dm3
AAGAGT--GCC---AAGGC------------CAAG---AAGAAAGA--GGC---------TAAGCG-----------A-G------CTGCCGC---------------------------------------GGCGGCAGCAGC------------------------AGAAGCA-----------------GCAGC---------------TGCG---------------GCCGAGGCAGCTGCA------GCGGCAGC---------------AG----------------------CAGA------------------------AGCTGC--GGCG--------------GAGCAAAAAGCCA----AGCTAAAG---A---ACAAGAAGCAGGCGAAGAAGACAGCCG----------TG----GCTGTGGCC----ACCGCC-------------------------TCCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................C------------------------AGAAGCA-----------------GCAGC---------------TGCG---------------GCCG.................................................................................................................................................................................................................................................21118.00180000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000250010000000000000000700010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCAGGCGAAGAAGAC.....................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCAGGCGAAGAAGACAGCCG----------T.....................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGA------------------------AGCTGC--GGCG--------------GAGCAAAAAGCC...............................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................................................................................................AGC---------------AG----------------------CAGA------------------------AGCTGC--GGCG--------------GAGCA......................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGAAGACAGCCG----------TG----GCTGTGGCC----AC.................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
...............................CAAG---AAGAAAGA--GGC---------TAAGCG-----------A-G------CTGC..................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................TAAGCG-----------A-G------CTGCCGC---------------------------------------GGCGGCAA................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGGC------------CAAG---AAGAAAGA--GGC---------TAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GCGGCAGCAGC------------------------AGAAGCA-----------------GCA.........................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
................................AAG---AAGAAAGA--GGC---------TAAGCG-----------A-G------C.....................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGACAGCCG----------TG----GCTGTGGCC----...................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGGC------------CAAG---AAGAAAGA--GGC---------................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................AG---A---ACAAGAAGCAGGCGAAGT.........................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CA----AGCTAAAG---A---ACAAGAAGCAGGC..............................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GA------------------------AGCTGC--GGCG--------------GAGCAAAAAGCCA----..........................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GA------------------------AGCTGC--GGCG--------------GAGCAAAA...................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAAG---A---ACAAGAAGCAGGCG.............................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................A---ACAAGAAGCAGGCGAAGAA........................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AGCTAAAG---A---ACAAGAAGCAGGCGAAGAA........................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ACAAGAAGCAGGCGAAGAAGA......................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AAG---AAGAAAGA--GGC---------TAAGCG-----------A-G------CT....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGC---------------AG----------------------CAGA------------------------AGCTGC--GGC..........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................C--GGCG--------------GAGCAAAAAGCCA----AGC.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........C---AAGGC------------CAAG---AAGAAAGA--............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GCG--------------GAGCAAAAAGCCA----AGC.......................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................AAAGA--GGC---------TAAGCG-----------A-G------CTGCCG................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
............................................................TAAGCG-----------A-G------CTGCCGC---------------------------------------GGCGGCA.................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGGC------------CAAG---AAGAAAGA--GG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................G---AAGAAAGA--GGC---------TAAGCG-----------A-G------CTGCCGC---------------------------------------........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AAGCG-----------A-G------CTGCCGC---------------------------------------GGCGGCAGC...............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCAGGCGAAGAAGA......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................CA-----------------GCAGC---------------TGCG---------------GCCGAGGC.............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGACAGCCG----------TG----GCTGTGGCC----...................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AAGCA-----------------GCAGC---------------TGCG---------------GCCGAG...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................C------------------------AGAAGCA-----------------GCAGC---------------TGCG---------------GCCC.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................A----AGCTAAAG---A---ACAAGAAGCAC................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................A---ACAAGAAGCAGGCGAAG..........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................A---ACAAGAAGCAGGCGAAGAAGA......................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................A----AGCTAAAG---A---ACAAGAAGCAGGCG.............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGACAGCCG----------TG----GCTGTGG.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................AGAAGCA-----------------GCAGC---------------TGCG---------------GCCGA................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AAGACAGCCG----------TG----GCTGTGGCC----...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GA------------------------AGCTGC--GGCG--------------GAGCAAA....................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGCAGGCGAAGAAGACA....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...AGT--GCC---AAGGC------------CAAG---AAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCAGGCGAAGAAGA......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................G---AAGAAAGA--GGC---------TAAGCG-----------A-G------C.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................GGC------------CAAG---AAGAAAGA--GGC---------TAAGCG-----------A-G------C.....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GAAGCA-----------------GCAGC---------------TGCG---------------GCCGAGGCAGC..........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ACAAGAAGCAGGCGAAGA.........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGGCGAAGAAGACA....................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCGAAGAAGACAGCC.................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAAG---A---ACAAGAAGCAGGCGAAG..........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........C---AAGGC------------CAAG---AAGAAAGA--GGC---------TAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGACAGCCG----------TG----GCT.............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGAAGAAGACAGCCG----------T.....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGC---------------AG----------------------CAGA------------------------AGCTGC--GGCG--------------GAGCAAA....................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................G---A---ACAAGAAGCAGGCGAAGAAGACAGC..................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................A-----------------GCAGC---------------TGCG---------------GCCGAGGCA............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................A----AGCTAAAG---A---ACAAGAAGCAGG...............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGAGT--GCC---AAGGC------------CAAG---AAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGAAGACAGCCG----------TG----G...............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........C---AAGGC------------CAAG---AAGAAAGA--GGC---------................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.............................................................................................................................................................................................................................................................................................................GA------------------------AGCTGC--GGCG--------------GAGCAAAAA..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................CCGC---------------------------------------GGCGGCAGCAGC------------------------AGAA................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGCAGGCGAAGAA........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AAGCA-----------------GCAGC---------------TGCG---------------GCCGAGG..............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................C---------------AG----------------------CAGA------------------------AGCTGC--GGCG--------------GAGCAAAAAG.................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
AAGAGT--GCC---AAGGC------------CAAG---AAGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................G---A---ACAAGAAGCAGGCGAA...........................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGGC------------CAAG---AAGAAAGA--G...........................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................AG---A---ACAAGAAGCAGGCGAA...........................................................................1920.5010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................A------GCGGCAGC---------------AG----------------------CAGA------------------------AGCT.................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAGGCGAAGAAGAA.....................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCAGCAGC------------------------AGAAGCA-----------------GCA.........................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGCCGCCCAGGTGCTCTTCAACAAGCAGGAGAAG------------------------------------------------------CAGCAGCAGC------AGCAGGCCCAGGAGAAGTACCAGCAGCAACAGCAGCAGCAGCATCAGCAAAAC---------------------C--------------AGC---------------AGCA------------------------G---------CAGCACCAGC---------AGCAGCAACAGCAGCAGCGT-CAGCATC------------------------------AGTTCCTTGACCCAGCG---CAGCAG-------------------CAACAG---C---AGCAGCAGCAGA-------CACAGACG----------CA----ACAGCAGCA-----------------------------------GCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........CAGGTGCTCTTCAACAAGCAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
.............................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCGT-CAGCATC------------------------------.....................................................................................................................................................2711.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCAGA-------CACAGACG----------CA----ACAGC...........................................2111.00100000000000100000
......................................................................................................................................................................................................................................................................................................ATC------------------------------AGTTCCTTGACCCAGCG---CAGC.............................................................................................................................2411.00100001000000000000
........................................................................................................................................................................................................................................................................................CAGCAGCGT-CAGCATC------------------------------A....................................................................................................................................................1711.00100000010000000000
..................................................................................................................................................................................................................................................................................CAACAGCAGCAGCGT-CAGCATC------------------------------.....................................................................................................................................................2211.00100010000000000000
.............................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCGT-CAGCAT....................................................................................................................................................................................2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GA-------CACAGACG----------CA----ACAGCAGCA-----------------------------------GCC.2411.00100000000000001000
....................................................................................................................................................TCAGCAAAAC---------------------C--------------AGC---------------AGCA------------------------G---------CA................................................................................................................................................................................................................................2111.00100010000000000000
....................................................................................................................................................................................................................................................................................ACAGCAGCAGCGT-CAGCA.....................................................................................................................................................................................1820.50100000010000000000
................................................................................................................................................................................................................................................................................................................................................................G-------------------CAACAG---C---AGCAGCAGCAGA-------CAC.....................................................................2330.33100000000000100000
........................AGCAGGAGAAG------------------------------------------------------CAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................1930.33100000000001000000
.............................................................................................AGCAGC------AGCAGGCCCA.........................................................................................................................................................................................................................................................................................................................................................................1640.25100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGACG----------CA----ACAGCAGCA-----------------------------------....1750.20100000000001000000
................................................................................................................................CAGCAACAGCAGCAGCAGCAT.......................................................................................................................................................................................................................................................................................................................................21140.07100000000001000000
......................................................................................................................................................................................................................CA------------------------G---------CAGCACCAGC---------AGCAGC.........................................................................................................................................................................................................19200.05110000000000000000
.................................................................................................................................................................................................................................................................AGC---------AGCAGCAACAGCAGC................................................................................................................................................................................................18200.05100100000000000000
droSec2
CAGCAGCAG-----------------------------------------------------------------------------------------C------AGCAGGCCCAGGAGAAGTACCAGCAGCAACAGCAGCAGCAGCATCAGCAAAAC---------------------C--------------AGC---------------AGCA------------GCAGCAG------------------CACCAGC---------AGCAGCAACAGCAGCAGCGT-CAGCATC------------------------------AGTTCCTTGACCCAGCG---CAGCAG-------------------CAACAG---C---AGCAGCAGCAGA-------CACAGACG----------CA----ACAGCAGCA-----------------------------------GCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCGT-CAGCATC------------------------------A....................................................................................................................................................2411.0010010
.........................................................................................................................GTACCAGCAGCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................ATCAGCAAAAC---------------------C--------------AGC---------------AGCA------------........................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................ACAGCAGCAGCGT-CAGCATC------------------------------AGTTCC...............................................................................................................................................2611.0010100
..............................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCGT-CAGC......................................................................................................................................................................................2311.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................C---AGCAGCAGCAGA-------CACAGAC.................................................................2011.0011000
...................................................................................................................................................................................................................................................................................AACAGCAGCAGCGT-CAGCAT....................................................................................................................................................................................2011.0010010
........................................................................................................................................................................................................................................................................................................................................GTTCCTTGACCCAGCG---CA...............................................................................................................................1811.0010001
............................................................................................................AGGCCCAGGAGAAGTACCAGC...........................................................................................................................................................................................................................................................................................................................................................2111.0010010
...CAGCAG-----------------------------------------------------------------------------------------C------AGCAGGCCCAGGA......................................................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................................................ACCCAGCG---CAGCAG-------------------CAACA...................................................................................................1911.0010001
.........................................................................................................................................................................................................................................................................................AGCAGCGT-CAGCATC------------------------------AGTTCCT..............................................................................................................................................2211.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................AGA-------CACAGACG----------CA----ACAGC...........................................1811.0010010
..............................................................................................................................................GCAGCATCAGCAAAAC---------------------C--------------AGC---------------AGCA------------........................................................................................................................................................................................................................................................2411.0010001
........................................................................................................................................................................................................................................................................................................................................GTTCCTTGACCCAGCG---CAGC.............................................................................................................................2011.0010001
....................................................................................................................GAGAAGTACCAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................1911.0010010
.................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCGT-CAGC......................................................................................................................................................................................2020.5010100
......................................................................................................................................................................................................................................................................................................................................................................................ACAG---C---AGCAGCAGCAGA-------CACA....................................................................2120.5010010
..................................................................................................................................................................................................AGC---------------AGCA------------GCAGCAG------------------CACCAGC---------AGCAGC.........................................................................................................................................................................................................2720.5010010
...................................................................................................................................................................................................................................................................................AACAGCAGCAGCGT-CAGC......................................................................................................................................................................................1840.2510010
..................................................................................................................................................................................................AGC---------------AGCA------------GCAGCAG------------------CACCAGC---------A..............................................................................................................................................................................................................22100.1010010
...........................................................................................................................................................AAC---------------------C--------------AGC---------------AGCA------------GCAGCAG------------------C..............................................................................................................................................................................................................................19150.0710010
........................................................................................................................................GCAGCAGCAGCATCAGCAA.................................................................................................................................................................................................................................................................................................................................19190.0510010
...............................................................................................................................................................................................................................................................CCAGC---------AGCAGCAACAGCAGC................................................................................................................................................................................................20200.0510100
......................................................................................................................................CAGCAGCAGCAGCATCAGCA..................................................................................................................................................................................................................................................................................................................................20200.0510010
droYak3
TGGA-GCCGCCGTCCTATGC--CAAGAG---CATG---CA--------------------------GGCCAAGGCGGCCACGGTG-GTGCAGCAGCAGC---------------------------AGCAGCAACAGCAGCAGGTGCAGCAGCAACAG---------------------C--------------AGG---------------TGCA------------------------G---------CAGCAGCAGC---------AGGTGCAACAGCAGCAGCAGC-------AACAAC------------------------------------------------AC-------------------CTCC------AGCAGCA---G---------------------------------CAGCAACTGCAGGCG-----------------------------TTGAGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................TG---CA--------------------------GGCCAAGGCGGCCACGGC........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..................................................................................GTG-GTGCAGCAGCAGC---------------------------AGCAGCAACG....................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
......................CAAGAG---CATG---CA--------------------------GGCCAAGGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................................................GCAACAG---------------------C--------------AGG---------------TGCA------------------------G---------CAGCA.............................................................................................................................................................................................................................2150.20101000000000
.................................................................................................................................................GCAGCAGCAACAG---------------------C--------------AGG---------------TG......................................................................................................................................................................................................................................................................1950.20101000000000
..................................................................................................C---------------------------AGCAGCAACAGCAGCAGGT...........................................................................................................................................................................................................................................................................................................................................2060.17101000000000
..........................................................................................................................................................ACAG---------------------C--------------AGG---------------TGCA------------------------G---------CAGCA.............................................................................................................................................................................................................................1860.17101000000000
..........................................................................................AGCAGCAGC---------------------------AGCAGCAACAGCAGCAGG............................................................................................................................................................................................................................................................................................................................................2770.14101000000000
droEre2
ATATCGCCGCTGGCTCA-------------------------------------------------------------------G-GTGCAGCAGCAGC---AGCAACAGCT------------------CCAGC---AGCTGCAGCAACAGCAGTTCCAGCAGCAACAGCAGCA-----ACAGCTGCAACAGCAGCAGC------------AGCA------------------------G------CAGCAGCAGCAGC---------AGCTGCAACAGCAGCAGCA-------------GC------------------AGCAGC------------------------AG-------------------CAAC------AACAGCA---G---------------------------------CAGCAACAGG----------------------------------CAGCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................GCAGC---AGCAACAGCT------------------CCAGC---AGCT..............................................................................................................................................................................................................................................................................................................................................2411.0010000010
................................................................................................AGC---AGCAACAGCT------------------CCAGC---AGC...............................................................................................................................................................................................................................................................................................................................................2111.0010000010
................................................................................................................................................AGCAACAGCAGTTCCAGCAGC.......................................................................................................................................................................................................................................................................................................................2111.0010100000
..................................................................................................................................CCAGC---AGCTGCAGCAACAGCA..................................................................................................................................................................................................................................................................................................................................2111.0010001000
.....................................................................................................................................GC---AGCTGCAGCAACAGCAGTTCCAGCAGC.......................................................................................................................................................................................................................................................................................................................2911.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................ACAGCA---G---------------------------------CAGCAACAGG----------------------------------CAGCT.2211.0010000010
..........................................................................................................ACAGCT------------------CCAGC---AGCTGCAGCAACAGCA..................................................................................................................................................................................................................................................................................................................................2711.0011000000
.....................................................................................................................................................CAGCAGTTCCAGCAGCAACAGCAG...............................................................................................................................................................................................................................................................................................................2411.0010000010
................................................................................................................................................................................................................................................................................................................................................................G-------------------CAAC------AACAGCA---G---------------------------------CAGCAACAGG----------------------------------C.....2420.5010100000
.............................................................................................................................................................................................................................................................CAGCAGC---------AGCTGCAACAGCAGCA...............................................................................................................................................................................................2330.3311000000
.............................................................................................................................................................................................................................................................CAGCAGC---------AGCTGCAACAGCAG.................................................................................................................................................................................................2140.2511000000
......................................................................................................................................................................................................................................................................................................................................................................................AC------AACAGCA---G---------------------------------CAGCAACAGG----------------------------------......2080.1311000000
....................................................................................................................................AGC---AGCTGCAGCAACAGCA..................................................................................................................................................................................................................................................................................................................................1980.1310000010
......................................................................................................................................................................................................GC------------AGCA------------------------G------CAGCAGCAGCAGC---------AGCTGC.........................................................................................................................................................................................................26200.0510100000
...............................................................................................................................................................................................................................................................................................A-------------GC------------------AGCAGC------------------------AG-------------------CAAC------AACAGCA---G---------------------------------C.................................................24200.0511000000
............................................................................................................................................................................................................................................................................................AGCA-------------GC------------------AGCAGC------------------------AG-------------------CAAC------AACAGCA---G---------------------------------CA................................................28200.0511000000

Generated: 05/17/2015 at 10:20 PM