ID:

dmo_43

 Coordinate:

scaffold_6540:6632027-6632086 +

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.2 -37.6 -37.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GTGTTGTGCAACGATGTCGGTGTTCAGTGTTCAGTGTTGGTCAGCCTTAAGAGTGAACCGCGTCAATTTTCACAGTTTGATGTGTGAAAGTTGATGGTGGTACACAATTAAGACTGAAACCCAAAAGCATCGTATCTGAAAATACTATAAATCAGTTAAA

***********************************.((((((((.(((((..(((.((((((((((((((((((........))))))))))))).))))).)))..))))).))))...))))************************************ 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M060

embryo

 M046

female body

 V056

head

 V041

embryo

 V049

head
..................................................GAGTGAACCGCGTCAATTTTCA........................................................................................ 22 0 1 2103.00 2103 1996 30 33 20 16 8
......................................................................................AAAGTTGATGGTGGTACACAATT................................................... 23 0 1 393.00 393 1 380 11 0 1 0
..................................................GAGTGAACCGCGTCAATTTTC......................................................................................... 21 0 1 110.00 110 92 7 10 1 0 0
..................................................GAGTGAACCGCGTCAATTTTCAA....................................................................................... 23 1 1 32.00 32 27 0 4 1 0 0
...................................................AGTGAACCGCGTCAATTTTCA........................................................................................ 21 0 1 26.00 26 20 1 5 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCC........................................................................................ 22 1 1 26.00 26 26 0 0 0 0 0
......................................................................................AGAGTTGATGGTGGTACACAATT................................................... 23 1 1 18.00 18 0 18 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTT.......................................................................................... 20 0 1 17.00 17 16 0 1 0 0 0
......................................................................................AAAGTTGATGGTGGTACACAATC................................................... 23 1 1 15.00 15 0 15 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCACC...................................................................................... 24 1 1 14.00 14 14 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACACAAT.................................................... 22 0 1 12.00 12 0 10 2 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCCC....................................................................................... 23 1 1 11.00 11 11 0 0 0 0 0
..................................................GGGTGAACCGCGTCAATTTTCA........................................................................................ 22 1 1 7.00 7 2 4 0 0 0 1
..................................................GAGTGAACCGCGTCAATTTTCAAA...................................................................................... 24 1 1 7.00 7 5 0 2 0 0 0
..................................................GAGCGAACCGCGTCAATTTTCA........................................................................................ 22 1 1 7.00 7 7 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCG........................................................................................ 22 1 1 6.00 6 4 0 0 1 1 0
......................................................................................ATAGTTGATGGTGGTACACAATT................................................... 23 1 1 5.00 5 0 5 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCCCC...................................................................................... 24 2 1 5.00 5 5 0 0 0 0 0
......................................................................................AAAGTTGATGGCGGTACACAATT................................................... 23 1 1 5.00 5 0 5 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCCCCC..................................................................................... 25 3 1 4.00 4 4 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCAC....................................................................................... 23 0 1 4.00 4 4 0 0 0 0 0
.........................................................................................GTTGATGGTGGTACACAATT................................................... 20 0 1 4.00 4 0 4 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCAAAAA.................................................................................... 26 3 1 4.00 4 2 0 2 0 0 0
..................................................GAGTGAACCGCGTAAATTTTCA........................................................................................ 22 1 1 4.00 4 4 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTT........................................................................................... 19 0 1 3.00 3 2 0 1 0 0 0
.......................................................................................AAGTTGATGGTGGTACACAATT................................................... 22 0 1 3.00 3 0 2 1 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCT........................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
..................................................GATTGAACCGCGTCAATTTTCA........................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
..................................................GAGTGAACCGAGTCAATTTTCA........................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTCCA........................................................................................ 22 1 1 3.00 3 2 0 0 0 1 0
......................................................................................AAAGTTGATGGTTGTACACAATT................................................... 23 1 1 3.00 3 0 3 0 0 0 0
..................................................GAGTTAACCGCGTCAATTTTCA........................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACACAA..................................................... 21 0 1 3.00 3 1 1 1 0 0 0
....................................................GTGAACCGCGTCAATTTTCA........................................................................................ 20 0 1 3.00 3 3 0 0 0 0 0
.....................................................................................CAAAGTTGATGGTGGTACACAATT................................................... 24 1 1 3.00 3 0 3 0 0 0 0
..................................................GAGTGAACCGCGTCAACTTTCA........................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
..................................................GAGTGAACAGCGTCAATTTTCA........................................................................................ 22 1 1 3.00 3 2 1 0 0 0 0
......................................................................................AGAGTTGATGGTGGTACACAATC................................................... 23 2 1 2.00 2 0 2 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCAG....................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
......................................................................................AAAGTTGATCGTGGTACACAATT................................................... 23 1 1 2.00 2 0 2 0 0 0 0
..................................................GAGTGAACCGCCTCAATTTTCA........................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTC.......................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
......................................................................................AAAGTTGATGGAGGTACACAATT................................................... 23 1 1 2.00 2 0 2 0 0 0 0
..................................................GAGTGAATCGCGTCAATTTTCA........................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
..................................................GAGAGAACCGCGTCAATTTTCA........................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACACA...................................................... 20 0 1 2.00 2 0 0 2 0 0 0
..................................................GAGTGAACCGCATCAATTTTCA........................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
..................................................GAGTGAACCGCGCCAATTTTCA........................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0
..........................................................................................TTGATGGTGGTACACAATT................................................... 19 0 1 2.00 2 0 2 0 0 0 0
..................................................GAGTAAACCGCGTCAATTTTCA........................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
..................................................GAGGGAACCGCGTCAATTTTCA........................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
......................................................................................AAAGATGATGGTGGTACACAATT................................................... 23 1 1 2.00 2 0 2 0 0 0 0
......................................................................................AACGTTGATGGTGGTACACAATT................................................... 23 1 1 2.00 2 0 2 0 0 0 0
.........................................................................................GGTGATGGTGGTACACAATT................................................... 20 1 1 2.00 2 0 2 0 0 0 0
......................................................................................TAAGTTGATGGTGGTACACAATT................................................... 23 1 1 2.00 2 0 2 0 0 0 0
......................................................................................AAAGTAGATGGTGGTACACAATC................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCGCGTCTATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGCGGTACACAATC................................................... 23 2 1 1.00 1 0 1 0 0 0 0
......................................................................................AAAGTTTATGGTGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
......................................................................................AAACTTGATGGTGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
......................................................................................AAATTTGATGGTGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCAAAA..................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACACAT..................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................GAGCGAACCGCGTCAATTTT.......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................TAGTGAACCGCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................GAATGAACCGCGTCAATTTTCC........................................................................................ 22 2 1 1.00 1 0 0 0 0 0 1
......................................................................................AAAGTTGCTGGTGGTACACAAT.................................................... 22 1 1 1.00 1 0 1 0 0 0 0
......................................................................................AAAGTTGATGATGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
....................................................................................TCAAAGTTGATGGTGGTACACAATT................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCGCGTCAATTA........................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCCA....................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGAACCGCGGCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTCTCA........................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0
...................................................AGTGAACCGCGTCAATTTTCAAAAA.................................................................................... 25 3 1 1.00 1 0 0 1 0 0 0
..................................................GAGTGAACCGCGTCGATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGACGGTGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGTACCGCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................GAGTTAACCGCGTCAATTTT.......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGAACCGTGTCAATTTT.......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGGACCGCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTGGATGGTGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
......................................................................................AAAGCTGATGGTGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCACA...................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..................................................GTGTGAACCGCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACACAATG................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCTCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................GTGTGAACCGCGTCAATCTTCAC....................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
..................................................GAGTAAACCGCGTCGATTTTCG........................................................................................ 22 3 1 1.00 1 0 0 0 1 0 0
..................................................GAGTGAACCGAGTCAATTTTC......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACTGCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACACAATTT.................................................. 24 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCATC...................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTCAAC...................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTTAAA...................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGTTCACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACACAACT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
......................................................GAACCGCGTCAATTTTCA........................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGTGTTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACAC....................................................... 19 0 1 1.00 1 0 0 1 0 0 0
......................................................................................AAAGTTGATGGTGGAACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTTAACCACGTCAATTTTCA........................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGGACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTTAA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................................GATCAAAGTTGATGGTGGTACACAATT................................................... 27 3 1 1.00 1 0 1 0 0 0 0
.....................................................................................CAAAGTTGATGGTGGTACACAATC................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................GCGTGAACCGCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACACGATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAGCCGCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGATGGTGGTACAT....................................................... 19 1 1 1.00 1 0 0 0 0 0 1
......................................................................................AGAGTTGCTGGTGGTACACAATT................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCGCGTCAATTTCA......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTTCTGGTGGTACACAATT................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................GAGTGAACCCCGTCAATTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGAACCGCGTCCATTTTCA........................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0
..................................................GAGTGAACCGCGTCAAATTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................GCGTGAACCGCATCACTTTTCA........................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0
..................................................GAGTGAACCGCGTCAGTTTTCA........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AAAGTTGCTGGTGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................CAATGTTGATGGTGGTACACAATT................................................... 24 2 1 1.00 1 0 1 0 0 0 0
......................................................................................AAAGTTGATGGGGGTACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
......................................................................................AAAGTTGATGGTGGCACACAATT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
........................................................................................AAGTTATGGTGGTACACAATT................................................... 21 3 3 0.33 1 0 1 0 0 0 0
...TTGTGCAGCGGTTTCGGTGT......................................................................................................................................... 20 3 7 0.29 2 2 0 0 0 0 0
...TTGTGCAGCGGTTTCGGTGTT........................................................................................................................................ 21 3 4 0.25 1 1 0 0 0 0 0
..............................................................................AATGTGTGAAAGTTGATG................................................................ 18 1 5 0.20 1 0 1 0 0 0 0
........CGACTATCTCGGTGTTCAG..................................................................................................................................... 19 3 7 0.14 1 0 1 0 0 0 0
....TGTGCAGCGGTTTCGGTGTT........................................................................................................................................ 20 3 10 0.10 1 1 0 0 0 0 0

Anti-sense strand reads

CACAACACGTTGCTACAGCCACAAGTCACAAGTCACAACCAGTCGGAATTCTCACTTGGCGCAGTTAAAAGTGTCAAACTACACACTTTCAACTACCACCATGTGTTAATTCTGACTTTGGGTTTTCGTAGCATAGACTTTTATGATATTTAGTCAATTT

************************************.((((((((.(((((..(((.((((((((((((((((((........))))))))))))).))))).)))..))))).))))...))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 M060

embryo

 V056

head

 V110

male body		 V049

head
....................................................................................TCTTTCAACTACCACCATGTGTC..................................................... 23 2 1 1.00 1 1 0 0 0 0
..............................................................................................ACCACCACGTGTCAATTCTA.............................................. 20 3 3 0.33 1 0 1 0 0 0
.............................................................CACTTAAAAGCGTCACACTAC.............................................................................. 21 3 6 0.17 1 0 0 1 0 0
.................................................................................................................................AGCATAGACTTTTCGGACAT........... 20 3 6 0.17 1 0 0 0 1 0
..........................................................GCGTAGTTAAAAGTGTTGAAC................................................................................. 21 3 9 0.11 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6540:6631977-6632136 + dmo_43 confident GTGTTGTGCAACGATGTCGGTGTTCAGTGTTCAGTGTTGGTCAGCCTTAAGAGTGAACCGCGTCAATTTTCACAGTTTGATGTGT-------GAAAGTTGATGGTGGTACACAATTAAGACTGAAACCCAAAAGCATCGTATCTG-------AAAATACTATAAATCAGTTAAA
droVir3 scaffold_12855:6284314-6284474 + dvi_220 confident GTGTTGTAAA---------GTGTTCGTAGT--AGTGCTGTCTAGACTCAGCGGTGAACCACATCAATTTTCTTAATTGAGTTTCTAAATGCAGAAAGTTGATGGTGGTACACAGCTAAGTCTACAGGC--AAAACAACATTTCAGATAACATAAAATACAACAATTCTATCAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GTGTTGTGCAACGATGTCGGTGTTCAGTGTTCAGTGTTGGTCAGCCTTAAGAGTGAACCGCGTCAATTTTCACAGTTTGATGTGT-------GAAAGTTGATGGTGGTACACAATTAAGACTGAAACCCAAAAGCATCGTATCTG-------AAAATACTATAAATCAGTTAAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................GAGTGAACCGCGTCAATTTTCA......................................................................................................2212103.0021033316820301996
.............................................................................................AAAGTTGATGGTGGTACACAATT..........................................................231393.00393111003801
..................................................GAGTGAACCGCGTCAATTTTC.......................................................................................................211110.0011010001792
..................................................GAGTGAACCGCGTCAATTTTCAA.....................................................................................................23132.00324001027
...................................................AGTGAACCGCGTCAATTTTCA......................................................................................................21126.00265000120
..................................................GAGTGAACCGCGTCAATTTTCC......................................................................................................22126.00260000026
..................................................GAGTGAACCGCGTCAATTTT........................................................................................................20117.00171000016
.............................................................................................AAAGTTGATGGTGGTACACAATC..........................................................23115.00150000150
..................................................GAGTGAACCGCGTCAATTTTCACC....................................................................................................24114.00140000014
.............................................................................................AAAGTTGATGGTGGTACACAAT...........................................................22112.00122000100
..................................................GAGTGAACCGCGTCAATTTTCG......................................................................................................2216.006010104
..................................................GAGTGAACCGCGTCAATTTTCAC.....................................................................................................2314.004000004
................................................................................................GTTGATGGTGGTACACAATT..........................................................2014.004000040
..................................................GAGTGAACCGCGTCAATTT.........................................................................................................1913.003100002
..............................................................................................AAGTTGATGGTGGTACACAATT..........................................................2213.003100020
..................................................GAGTGAACCGCGTCAATTTTCT......................................................................................................2213.003000003
.............................................................................................AAAGTTGATGGTGGTACACAA............................................................2113.003100011
....................................................GTGAACCGCGTCAATTTTCA......................................................................................................2013.003000003
..................................................GAGTGAACCGCGTCAATTTTCAG.....................................................................................................2312.002000002
..................................................GAGTGAACCGCGTCAATTTC........................................................................................................2012.002000002
.............................................................................................AAAGTTGATGGTGGTACACA.............................................................2012.002200000
.................................................................................................TTGATGGTGGTACACAATT..........................................................1912.002000020
.............................................................................................AAAGTTGATGGTGGTACACAT............................................................2111.001100000
..................................................GAGTGAACCGCGTCAATTA.........................................................................................................1911.001000001
..................................................GAGTGAACCGCGTCAATTTTCCA.....................................................................................................2311.001000001
..................................................GAGTGAACCGCGTCAATTTTCACA....................................................................................................2411.001000001
.............................................................................................AAAGTTGATGGTGGTACACAATG..........................................................2311.001000010
.............................................................................................AAAGTTGATGGTGGTACACAATTT.........................................................2411.001000010
..................................................GAGTGAACCGCGTCAATTTTCATC....................................................................................................2411.001000001
..................................................GAGTGAACCGCGTCAATTTTCAAC....................................................................................................2411.001000001
......................................................GAACCGCGTCAATTTTCA......................................................................................................1811.001000001
.............................................................................................AAAGTTGATGGTGGTACAC..............................................................1911.001100000
.............................................................................................AAAGTTGATGGTGGTACAT..............................................................1911.001001000
..................................................GAGTGAACCGCGTCAATTTCA.......................................................................................................2111.001000001
droVir3
GTGTTGTAAA---------GTGTTCGTAGT--AGTGCTGTCTAGACTCAGCGGTGAACCACATCAATTTTCTTAATTGAGTTTCTAAATGCAGAAAGTTGATGGTGGTACACAGCTAAGTCTACAGGC--AAAACAACATTTCAGATAACATAAAATACAACAATTCTATCAAASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................CGGTGAACCACATCAATTTTCT......................................................................................................2212244.002244106007010000000000006000100071246924577902000009000000000000000001000000500000000000000
.............................................................................................AAAGTTGATGGTGGTACACAG............................................................2111869.0018691142192011012612800000000002700000005343871514200151000010000000000000000010000100000093511000000
..................................................CGGTGAACCACATCAATTTTCTC.....................................................................................................231337.003370040040000000000000020000000110653711300000001000000000000000000000100000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGCT..........................................................231252.0025250400302001300000000001000000006252136202100004000000000000000000000100000000000000000
.............................................................................................AAAGTTGATGGTGGTACACA.............................................................201212.00212204000013000000000000100000006851185201000001000000000000000000000000000000100000000
..................................................CGGTGAACCACATCAATTTTCTCC....................................................................................................241169.0016900300000000000000000100000003834246800000000000000000000000000000000000000010000000
..................................................CGGTGAACCACATCAATTTTC.......................................................................................................211147.0014700000100000000000000000000002836216100000000000000000000000000000000000000000000000
........................................................................TAATTGAGTTTCTAAATGCAG.................................................................................211145.00145000005000000000000001000000004226834030000016000000000000000000000100000000000000000
.............................................................................................AAAGTTGATGGTGGTACAC..............................................................19190.00905020010802000000000010000000262151702000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGC...........................................................22182.00824021010500000000000010000000231661900000001000000000000000000100000000001100000000
..................................................CGGTGAACCACATCAATTTTCTA.....................................................................................................23153.00530000000000000010000000000000171071800000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGT...........................................................22135.003500100000070000000000000000001072800000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACA...............................................................18133.00330010000601000000000010000000583800000000000000000000000000000000000000000000000
...................................................GGTGAACCACATCAATTTTCT......................................................................................................21131.003100000000000000000000000000001463800000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAA............................................................21130.003010000004000000000000000000007711000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGCTC.........................................................24121.00211000000301000000000010000000233700000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTT........................................................................................................20119.00190000000000000000000000000000534700000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTT.....................................................................................................23118.00180000000000000000000010000000353600000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTACACA.............................................................21116.00160000000001000000000000000000622500000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTTC....................................................................................................24116.001600000000000000000000000000001211200000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCC......................................................................................................22115.00150000000000000000000000000000422700000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACC.............................................................20114.00140010000000000000000000000000234300000001000000000000000000000000000000000000000
...................................................GGTGAACCACATCAATTTTCTCC....................................................................................................23112.00120000000000000000000000000000412500000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTCCC...................................................................................................25112.00120030000000000000000000000000421101000000000000000000000000000000000000000000000
................................................AGCGGTGAACCACATCAATTTT........................................................................................................22112.00120000000000000000000000000000331500000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGA...........................................................22111.00110010000001000000000000000000211500000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACAA..............................................................19110.00100000000100000000000000000000620100000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTACAC..............................................................20110.00100000000300000000000000000000121300000000000000000000000000000000000000000000000
..............................................................................................AAGTTGATGGTGGTACACAG............................................................2019.0090030000000000000000010000000110300000000000000000000000000000000000000000000000
........................................................................................TGCAGAAAGTTGATGGTGGTA.................................................................2119.0090000000002000000000000000000313000000000000000000000000000000000000000000000000
................................................AGCGGTGAACCACATCAATTTTC.......................................................................................................2319.0090000000000000000000000000000130500000000000000000000000000000000000000000000000
........................................................................................TGCAGAAAGTTGATGGTGGTACA...............................................................2318.0080000000000000000000000000000201400000000000000000000000000000100000000000000000
.............................................................................................AAAGTTGATGGTGGTACACT.............................................................2018.0080000000000000000000000000000240101000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAT............................................................2117.0070000000000000000000000000000320200000000000000000000000000000000000000000000000
........................................................................................TGCAGAAAGTTGATGGTGGTAT................................................................2217.0070000000000000000000000000000300400000000000000000000000000000000000000000000000
........................................................................................TGCAGAAAGTTGATGGTGGTAC................................................................2217.0070000000100000000000010000000110300000000000000000000000000000000000000000000000
..........................................................................................CAGAAAGTTGATGGTGGTAC................................................................2016.0060000000000000000000000000000141000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTCCT...................................................................................................2516.0060000000000000000000000000000020400000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTCT....................................................................................................2416.0060000010000000000000000000000010400000000000000000000000000000000000000000000000
...............................................................................................AGTTGATGGTGGTACACAGCT..........................................................2115.0050000000000000000000000000000301100000000000000000000000000000000000000000000000
..........................................................................................CAGAAAGTTGATGGTGGTACACAG............................................................2415.0050000010000000000000000000000110200000000000000000000000000000000000000000000000
..........................................................................................CAGAAAGTTGATGGTGGTACAC..............................................................2215.0050000000001000000000010000000110100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGCTT.........................................................2415.0050000000000000000000000000000220100000000000000000000000000000000000000000000000
........................................................................TAATTGAGTTTCTAAATGCA..................................................................................2015.0050000000000000000000000000000101101000001000000000000000000000000000000000000000
...................................................GGTGAACCACATCAATTTTCTC.....................................................................................................2214.0040010000000000000000000000000100200000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTACA...............................................................1914.0040000000000000000000000000000210100000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTACACAGCT..........................................................2414.0040000000000000000000000000000110101000000000000000000000000000000000000000000000
................................................AGCGGTGAACCACATCAATTTTCC......................................................................................................2413.0030000000000000000000000000000101100000000000000000000000000000000000000000000000
..........................................................................................CAGAAAGTTGATGGTGGTACACA.............................................................2313.0030000000000000000000000000000001200000000000000000000000000000000000000000000000
.......................................................................TTAATTGAGTTTCTAAATGCAGAAAGT............................................................................2713.0030000000000000000000000000000010100000001000000000000000000000000000000000000000
...................................................GGTGAACCACATCAATTTTCTA.....................................................................................................2213.0030000000000000000000000000000000300000000000000000000000000000000000000000000000
...........................................................................TTGAGTTTCTAAATGCAGAAAGTTG..........................................................................2513.0030000000000000000000000000000000002000001000000000000000000000000000000000000000
.................................................GCGGTGAACCACATCAATTTTCT......................................................................................................2313.0030000000000000000000000000000110100000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTTCCC..................................................................................................2613.0030000000000000000000020000000001000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACAT..............................................................1913.0030000000001000000000000000000011000000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTACACAG............................................................2213.0031000000000000000000000000000200000000000000000000000000000000000000000000000000
..........................................................................................CAGAAAGTTGATGGTGGTAT................................................................2013.0030000000000000000000010000000100100000000000000000000000000000000000000000000000
.............................T--AGTGCTGTCTAGACTCAG............................................................................................................................1913.0030000000200000000000000000000100000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATT..........................................................................................................1813.0030000000000000000000000000000110100000000000000000000000000000000000000000000000
....................................................GTGAACCACATCAATTTTCT......................................................................................................2013.0030000000000000000000000000000010200000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGTC..........................................................2312.0020000000000000000000000000000001100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAAT...........................................................2212.0020000000000000000000000000000020000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTCG....................................................................................................2412.0020000000000000000000000000000100001000000000000000000000000000000000000000000000
.......................................................AACCACATCAATTTTCTTAATT.................................................................................................2212.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTT.........................................................................................................1912.0020000000000000000000010000000000100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACC...............................................................1812.0020000000000000000000000000000001100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACT...............................................................1812.0020000000200000000000000000000000000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCA......................................................................................................2212.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTCTC......................................................................................................2212.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTTAA...................................................................................................2512.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTCT.......................................................................................................2112.0020000000000000000000000000000010100000000000000000000000000000000000000000000000
................................................AGCGGTGAACCACATCAATTT.........................................................................................................2112.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAC............................................................2112.0020001000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTACAA..............................................................2012.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGTG..........................................................2312.0020000000000000000000000000000100001000000000000000000000000000000000000000000000
...............................................................................................AGTTGATGGTGGTACACAGCTAA........................................................2312.0020000000000000000000020000000000000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGCC..........................................................2312.0021000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGCG..........................................................2311.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GAACCACATCAATTTTCTCC....................................................................................................2011.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGTAG.........................................................2411.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................CAGAAAGTTGATGGTGGTACA...............................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................CAGAAAGTTGATGGTGGTA.................................................................1911.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTTAATC.................................................................................................2711.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAAA...........................................................2211.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTC.........................................................................................................1911.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................................AGTTGATGGTGGTACACAGCTT.........................................................2211.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTACACC.............................................................2111.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTACACAGC...........................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................TAATTGAGTTTCTAAATGCAGAAAGT............................................................................2611.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAATA..........................................................2311.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACACT...........................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
............................................................................................GAAAGTTGATGGTGGTAT................................................................1811.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................GGTGAACCACATCAATTTTC.......................................................................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGTA..........................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................AAGTTGATGGTGGTACACAGA...........................................................2111.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................TGAACCACATCAATTTTCT......................................................................................................1911.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGAGG.........................................................2411.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACTT............................................................2111.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................................................TGCAGAAAGTTGATGGTGGT..................................................................2011.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
...................................................GGTGAACCACATCAATTTT........................................................................................................1911.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACCA............................................................2111.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACAG..............................................................1911.0010000000100000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGCTCT........................................................2511.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................................TGCAGAAAGTTGATGGTGGTACAA..............................................................2411.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................ATTGAGTTTCTAAATGCAG.................................................................................1911.0010000010000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTAC......................................................................................................2211.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
...................................................GGTGAACCACATCAATTTCT.......................................................................................................2011.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................................................TCTAAATGCAGAAAGTTGATGGT.....................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGCTTC........................................................2511.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................................TTGAGTTTCTAAATGCAGAAAG.............................................................................2211.0010000010000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GGTGAACCACATCAATTTTCC......................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AGTTGATGGTGGTACACAG............................................................1911.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................TGAACCACATCAATTTTCTTA....................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTG.....................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................TAATTGAGTTTCTAAATGCAC.................................................................................2111.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................................................TGCAGAAAGTTGATGGTGGTAA................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTAT....................................................................................................2411.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
........................................................................TAATTGAGTTTCTAAATGCAA.................................................................................2111.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................AAGTTGATGGTGGTACACA.............................................................1911.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................GAACCACATCAATTTTCT......................................................................................................1811.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................................TAATTGAGTTTCTAAATGCAT.................................................................................2111.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
....................................................GTGAACCACATCAATTTTCTTAA...................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTTCC...................................................................................................2511.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
..................................................CGGTGAACCACATCAATTTTCTATC...................................................................................................2511.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACACAGCTCC........................................................2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACATT.............................................................2030.3310000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................AAAGTTGATGGTGGTACAGCT............................................................2140.2510000000000000000000000000000100000000000000000000000000000000000000000000000000

Generated: 10/20/2015 at 06:59 PM