ID:

dmo_426

 Coordinate:

scaffold_6308:1428977-1429127 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.2 -26.9 -26.9

Flybase annnotation

CDS [Dmoj\GI11145-cds]; exon [dmoj_GLEANR_11056:9]; intron [Dmoj\GI11145-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
  1. dmo_426  scaffold_6308:1428979-1428997 +
  2. scaffold_6308:1442987-1443005 +
star
  1. dmo_426  scaffold_6308:1429088-1429107 +
  2. scaffold_6308:1443096-1443115 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAAACGCGAAAACTTTCTGCTGCGCGAGCACATCATCGACTATGAGAAGAGTCAGGTCCAGGAGATAACGCAGCAGCAACAACTGCAGCAGCAACAGCAACAGCAGCAGCAACAGCAGCAACAGCAGCAACAGTCGCCGCGCCTGCGTCTCAATGGCAACAGCGACAATGCAACAACTTTTGTCTAAGACTCAATCATGCCCCAGTTTATTTTGTTTTTGTAGCGTCGATTCAAGTGCATTTTAGTTCATA
****************************************************.....(((.((((...(((((..((....((((..((.((....((....)).((.((....)).))....)).))..))))....))..)))))))))..))).....((......))..........********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V049
head
 V041
embryo
.......................................CTATGAGAAGAGTCAGGT.................................................................................................................................................................................................. 18 0 2 0.50 1 1 0 0 0 0
....................................................CAGGTCCAGGAGATAACGC.................................................................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0
........................................TATGAGAAGAGTCAGGTCCAGGAGAT......................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
.......................................................................................................................................................................................................................TTTTGTAGCGTCGATTCAAGTGCATTTTA....... 29 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................GCGACAATGCAACAACTTTT...................................................................... 20 0 2 0.50 1 1 0 0 0 0
...............TCTGCTGCGCGAGCACATCATCGACT.................................................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
..........................................................................................................CAGCAACAGCAGCAACAGC.............................................................................................................................. 19 0 20 0.20 4 4 0 0 0 0
..........................................................................................................CAGCAACAGCAGCAACAGCAGC........................................................................................................................... 22 0 20 0.10 2 0 0 0 0 2
...................................................................................................ACAGCAGCAGCAACAGCAGC.................................................................................................................................... 20 0 20 0.10 2 0 0 2 0 0
.........................................................................................AGCAACAGCAACAGCAGCAGCAAC.......................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
...........................................................................................................AGCAACAGCAGCAACAGCAG............................................................................................................................ 20 0 20 0.10 2 2 0 0 0 0
..........................................................CAGGAGATAACGGAACAGT.............................................................................................................................................................................. 19 3 15 0.07 1 1 0 0 0 0
.................................................................................ACTGCAGCAGCAACAGCAACA..................................................................................................................................................... 21 0 16 0.06 1 0 0 0 1 0
......................................................................................................GCAGCAGCAACAGCAGCAACAGCAG............................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
..............................................................................................CAGCAACAGCAGCAGCAACAGC....................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0
..................................................................................................AACAGCAGCAGCAACAGCAGCAAC................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
......................................................................................AGCAGCAACAGCAACAGCAGC................................................................................................................................................ 21 0 20 0.05 1 0 0 1 0 0
..................................................................................CTGCAGCAGCAACAGCAACAGCA.................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0
...................................................................................................ACAGCAGCAGCAACAGCAGCA................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
........................................................................................CAGCAACAGCAACAGCAGCAGC............................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
............................................................................................AACAGCAACAGCAGCAGCAACAGCA...................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
..............................................................................................CAGCAACAGCAGCAGCAAC.......................................................................................................................................... 19 0 20 0.05 1 0 0 0 1 0
...................................................................................TGCAGCAGCAACAGCAACAGC................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GTTTGCGCTTTTGAAAGACGACGCGCTCGTGTAGTAGCTGATACTCTTCTCAGTCCAGGTCCTCTATTGCGTCGTCGTTGTTGACGTCGTCGTTGTCGTTGTCGTCGTCGTTGTCGTCGTTGTCGTCGTTGTCAGCGGCGCGGACGCAGAGTTACCGTTGTCGCTGTTACGTTGTTGAAAACAGATTCTGAGTTAGTACGGGGTCAAATAAAACAAAAACATCGCAGCTAAGTTCACGTAAAATCAAGTAT
**********************************************************************.....(((.((((...(((((..((....((((..((.((....((....)).((.((....)).))....)).))..))))....))..)))))))))..))).....((......))..........**************************************************** 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M046
female body
 V041
embryo
...............................................................................................................................................................................TGAAGACAGTTTCTCAGTTA........................................................ 20 3 13 0.15 2 2 0 0
.................................................................................................................................TGCCGGCGGCGCGGACGTAG...................................................................................................... 20 3 18 0.06 1 0 1 0
..............................................................................................................................CGGTGTCCGAGGCGCGGAC.......................................................................................................... 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6308:1428927-1429177 + dmo_426 CAAAC------------------------------------GC-GAAAAC--TTTCTGCTGCGCGAGCACATCAT------CGAC-----------------------------------------------TATGAGAAGAGTC------------------AGGTCCAGGAGATAA------------------CGCAGCAGCAACAACTGCA----------------GCAGCAACAGCA------------------------------A------------CAGC---------------------------AGCAGCAA--------------------------------------------CAGC------AGCAA---------------C------AG---------CAG----------------------------------------CAA---CAGTCG----------------------------------------------------CCGCGCCTGCGTCTCAATGGCA---------------------------ACAGCGACAATGCAACAACTTTTGTCTAAGAC-------------------T--CAATCA-------------------------------------TG-CCC-----------------CAGTTTATTTTGTTTTTGTAGCG------------------------------------------------------------------------------------------------------------------------------------TCGATTCA--------------------------------------------AGTGCATTTT-----AGTTCATA
droVir3 scaffold_12472:126278-126580 - CAAAC------------------------------------GC-GAAAAC--TTTCTGCTCCGGGAGCATATCAT------TGAG-----------------------------------------------TATGAGAAAAGAC------------------AGGCACAGGAA------------GTGACCCAG-----------------------TCACAGAC-----------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------CAGCCAAGGGTCGATG-GTGCAGCAGTTACAAAAACAGAGCCGGAG---TTCTTT----------------------------------------------------TTGCGCCAGCGTCAAAATGGAAGTGATGCAG---------------CTGCTGGCGACAATGCCACAACCTATGTCTAAGAC-------------------T--ATAATACCTGAAACACGCACACGTAGCCTCCCAAATCC-----------CAAATCCGAACACTCCCATGTCCATGTTCTT-TGCCAGTGGTAATCGA-----------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------AGTGCATTTT-----AGT-TATA
droGri2 scaffold_15203:2084482-2084803 + CAAGC------------------------------------GC-GAGAAT--TTCTTGCTGCGCGAGCACATCAT------CGAA-----------------------------------------------TTTGAGAAAAGGA------------------AGGCACACGAA------------CTGGCGCAG-----------------------ACACCGAC-----------------------------------------------A--CAGAT------------------------------------------------------------------------------GCCAC---------------------------------------------CGAC----------------GATGAGTGCAGGATTCCCTAAAAAGGAACCGGAC---GAGTCA----------------------------------------------------CTGCGACAGCGTCTCAATGGCAACGATGCGGCAAC---------CACTGCTGGCGACAATGCCACCACATATGTCTAAGACTATTACTAACTCGTGTTC----------------TAATGTTCGCGTGTTCTTC--AATTTCAACTCCTACTCAAATTCAA--ACCCCCATGTCCATGTTCTT-TGCCAGTTGAAATC-------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------AGTGCATTTT-----AGT-TGTA
droWil2 scf2_1100000004909:8722771-8722939 + CAGGA------------------------------------GA-----AC--TATCTGCTACAGCAGCAG---TA------TCTC-------------------------------CAACAGCTG-----TA-----TCAGCAGC------------------AGATACATCAG---------------------CTGCAACAGCA-------------------------------------------------------------------ACAACAGCAGCAGCAGA---------------------------TGCAACA--------------GC---AGAT------------G---CAA---CAGC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCAGCAGATGC--------AA---------------------------CAACAGCAACA----------------GCAGC-----------------------------------AGATGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 3:11298449-11298623 + CAACA------------------------------------GC-AGCAAC--A----TCAACTGCAGCAG---CA------GCAT-------------------------------CAGCA-------------GCAGCAGCAGC------------------AACTGCAGCAGAAG------------------CAGCAACAGCA-------------------------------------------------------------------ACAACAGCAGCAGCAAC---------------------------ATAAACA--TCAACAGCAA---------------------------------CAAC------AGCAGCAGCAACATAAACAT----------------------------------------------------------------C------AGC--------AGCAA---------CAGCAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGCAGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC
droPer2 scaffold_17:1473390-1473631 + CAAGC------------------------------------GC-GAGAAT--TTCCTGCTGCGCGAACACATCAT------TGAG-----------------------------------------------TACGAGAAACAGC------------------ATGCCATGCTGCAGGCCCAGACAGCAGTCCA-------------------------------------------------------------------------------------------------------------------------------CAT-----------------------------------CCAGC---------------------------------------------AGACCAA-GAGCCAGGAGTCA------------------------------------TCGGGG-----------------------------A-----------------------TGCGCCAGCGCCATGGTGC---------------------------TGGTGATGAGGATGCCACCTCCTTTGTTTAACAG---------------------------------------------------------------------------------------------------------CC-----------------------------------------------------------------------------------------------------------------------------------TGG--GCCGTCTGCTTGCCTGCCTGCCTTTATACATATATATTTTTGTATATCCATAAGTTCAT----------TCCATA
droAna3 scaffold_13334:474095-474333 + GCAGC------------------------------------ACCAGCAG---------CTCCAGGAGCAGAT-----------------------------------------------------------------GCAGGAGC------------------AGGTCCAGCAGCAGATCCAGGAGCAAGTCCA-------------------------------------------------------------------------------G---------CAGATGC------------AGGAACAAATGCAGGAGCAGCAGC--AGCAGCAA---------------------------------CAGC------AGCAGCCGGCGGCGGTTCAG----------------------------------------------------------------G------TGC--------AGGTT---------CAGCAG-----------------------CAGC----------------------------------------------AGGTTGGTCTTTTATTTTTTATGTTTAAAAT-------------------T--TAATTA-------------------------------------ATTATT-----------------TAATTTATTTTTTT-TTTTAGCAACAACAGCAAGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGT-TCAT
droBip1 scf7180000396395:117135-117294 - CGCAGATCTCCTGCTACAACGTGTGATCATCAGGACAGG--AG-AGATCC--GCAG------------G-----------------------------------------------------------------------------------------AC---------------AA------------------AGGCAACAGCA-------------------------------------------------------------------ACATAAGCAGCAGCCGAAG---------------------------CAGAA--------------G------------------------------CAGA------AGCAG----------------CCGCAC--CAGCAGCAGCAG----------------------------------------C---AACATTAG----------------------------------------------------CAGC-----------------A------------------------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------AC---GTGCAACATGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------TG---------C-------AACA
droKik1 scf7180000302344:1389370-1389551 + CAAAA------------------------------------GC-TAAAAC------AGCAGCGGCAGCACTTAAT------ACAA-----------------------------------------------CATCAGCAGCGGC------------------TGCAACA----------------------------------------------------------------------------------GCTACCACAGCTGCAACAGCAACAGCAGCAACAGCTAA---------------------------AGCTACAAC--AGCTGCAA---------------------------------AAGC------AGCAAAAAAGACGGCTACAA----------------------------------------------------------------C------AGC--------AGCAA---------CGGTGG-----------------------CAAC-----------------------------------------------AGCT-----------------------------------------------------------------------------------------------------------------------------------------ACAACTGCAGCTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGT-ATAA
droFic1 scf7180000453215:877127-877315 + CCAAG------------------------------------AG-AAAAGC--GACGGGCAACGAGGCAACAGC------------------------------------------------------------------------------------------AGC---------------------------------------AACA-------------------------------------------ACA------------------A---------CAGTAGCAA------------------C------AACAACA--------------GC---AG------------------CAG---CAGC------AACAA----------------C-----AGTAG------CAA----------------------------------------C---AACAGCAGCAACATCCA-------------------------------------GCGGCA----------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAA--------------CAAACATG--------------------CGCCATTTCCCTGGGGAGTTTTCATTTGTTGACGGCGTTGC-------------------------CAG--CCAG------------------------------------------------------TTTGC----A-TGTACA
droEle1 scf7180000491194:467987-468208 - ACGGC------------------------------------AA---CATC--TACCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------ACAAGAGC---------------------------------------AACAACAGCAG--------------C--------AGCA---------------------------------------------AGCACAGTCGCAGCAGGAGC---------AAGCACA---------------------------------------------------------------------------------G--CAACAGCAACA-------------------------------------------------GCAGGAAC--------AACAACAGCAA------TTGCTGCTGCCACAGCAG---------------------------------------------------------------------CCACACAGG---------------------------------------------------------------------------------------------------------------------------------------TAA--------------AA----AAAAAACATAGAAGATCCAAGTTTGTAATACTCAAAGTAATTTTCGTTTGATTGGAGTTTTTT-------------------------TAA--T----T----------------------------------------------------TTTTA----A-TTTAAA
droRho1 scf7180000779985:281684-281854 - AACGC------------------------------------GA---GGCC--CGTCTGCTGG---------------------AC-----------------------------------------------TTTGAGATACGCCGGCAGCAGAAGCGGGACGAGC---------------------------------------AACAGCAGCAG--------------C--------GCCAGCAGCAACAGCA------------------A---------CTGCAGC---------------------------AGCACCG--------------CG---AG------------------CAGCAGCATCAGCAG---------------------C------AGC---------GC----------------------------------------GAG---------------C--------------AA------CTGCAGCAGC----------------------------------A---------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------CACCGCGAACAGCAGCAA--------------CA----TCAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------CCA
droBia1 scf7180000302113:2271361-2271536 + CAACA------------------------------------GC-AGCAACACTCGAGGCGGCAGCGGCA---------------G---CAGCAG----------------------CAACGTCTG-----TG-----GCAGCAGC------------------AACACCA----------------------------------------------------------------------------------GCA------------------A---------CTGT---------------AGGAGCAACATC---AGCAACA--GCAACAACAACAACTGTAG------------------CAGCAACAGC------AGCAG---------------C------AAC---------AC----------------------------------------CAA---------------C-----------------AACTG-----------------------TAGGA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATCAGCAACAGCAACAA--------------CA----AC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACT
droTak1 scf7180000415169:167693-167861 + CAAGC------------------------------------GA-GAGAAT--TTCCTGCTGCGGGAGCACATCAT------CGAG-----------------------------------------------TATGAGAAGCAGC------------------ACGCCATGAAGATGGCCCACAAGGAGGTGCA-------------------------------------G---------------------------------------------------GAGG--------------------------------------------------------------------------------------------TG-------------------CCAC----------------------------------------------AAA--AGTCGGAG---AACGGC----------------------------------------------------CTGCGAAGGC------------------------------------------GCGACGAGGCCACCTCCTTTGTATAATCC-------------------T--TGATCA-------------------------------------TT-CCT-----------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTT
droEug1 scf7180000409474:1058899-1059130 - TGCAC------------------------------------CC-GGAGAA--TT---GCATCTGCAGCGCATGAATAGCTTTGGTCAGGATGGACAATTTCACTTTGAGTCCAATCCGGCAGCTGGTGCTTA--TCAGCAGCATC---------AACTGATTAGC---CAGTATCAG------------------CAGCAACAGCA-------------------------------------------------------------------ACAACAGCAACAGCAGCAA---------------------------CAG-----------------------------------------CAA---CAGC------AACAA----------------CCTCAG--CAGCAGCAACA----------------------------------------------------GCACCATCTA------------------------------------------------------------------------------------------------------------------GCCCAA-----------------------------------------------------------------------------------------------------------------------------CAGCAGCAGCTCATGAGGAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------ACACG---------CC------CCAG
dm3 chrUextra:2433380-2433537 - GAGAA------------------------------------GG-AA------------------------------------------------------------------------------------------------GTC------------------AAATTCAAAGG---------------------------------------AGCCTCTACCAGCAGCA----------------------GAA------------------G---------CAGCAAC---------------------------AACAGCA--------------GC---AG------------------CAGAAGCAGTAACAGCAGCAA----------------CAAT-----------------------------------------------------------------------------------------AA------CAGCAGCAGCA----------------------------------------------------------------ACAACGACGACATCAGCTAAGTCAAAA-------------------CAATA--ATT-----------------------------------------------------------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTTATACAAACG---------CA------CATA
droSim2 x:8909507-8909690 + CAAAA------------------------------------GG-TACATC------AGCAACAAGAACG-----------------------------------------------------------------------------------------ACACGAGC---------------------------------------AACAACATCAG--------------C--------AGCA---------GCA------------------A---------CTGTAGC------------------------------AGCA--------------A--------CATCAGCAGCAG----CAGCAGCAGCAGCAACTG-------------------C-----------------AA----------------------------------------CAG------C-----------------------AA------CTGCAGCAGCAACATCAA---------------------------------------------------------------------G-------CGCA------ATCAGCAAATTGCATTAAATG--ACT-----------------------------------------------------------------TTGTATTGCAATTGT-----------------------------------------------------------------------------------------------------------------------------------TGG--C----TC---------------------------------------------------TCCC-----AGT-GATA
droSec2 scaffold_2:3670427-3670602 - CGCAGC-----------------------------------AACTGCAAC------AGCAGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------CAA----------------------CTGCAACAGCAGCGGCA------------------A---------CTGCAAC---------------------------AGCAGCC--------------GC---AA------------------CTGCAGCAGCAACAA---------------------C------ATC---------AC----------------------------------------CAA---------------CTA--------------------------------------------------------------GCA---------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------CACCAGAAATAGGAACAA--------------CA----TAGGT--------------------CA----------------------------GGCGTAACGAGTCATTCATGTTGCAGATATTGTTGGTATCATTTCG--------------------------------------------GCTGCTT-------------TTT
droYak3 2R:14438184-14438337 - GCCGC------------------------------------AGCAGCAA---CTGCAGCAGCAACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------CAGA---------------------------GGCAACTC--------------------------------------------CAGC------------------------------------AGCAACA-CAGCAACGGGTAA----------------------------------------------------------------------------------------GCGGCA----------------GCAGCA--------A----CTGCAATGAC-------GATTTGTGGCCAA-----------------------------------------TTA-------------------------------------TT-TCA-----------------AATATTGTATTGAAATTGT-----------------------------------------------------------------------------------------------------------------------------------AGG--CCAGTTTG--------------------------------------------AGTGTGTGCT-----AG-----T
droEre2 scaffold_4929:16197043-16197236 - CATGCGCCAACCACGACCGCGTTTGCCTATCAGAACGGCCACC-A-------------------------------------------------------------------------------------------AAGACGGCC------------------AGGCACAGCGG---------------------------------------CAACACCACCAGCAACA----------------------GCA------------------G---------CAGCAGC---------------------------AGCAACA--------------GC---AA------------------CAGCAACAGCAAAAGCAGCAA----------------CAGC-----------------------------------------------------------------------------------------AG------CAGCAGCAGCAACACCATCGGCA----------------ACGGCA---------------------------ACGGCAA--------CA--------------------------------CA---------------------------------------------------------------------------------CGACGGT-----------CGGCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAGA-TTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CAAAC------------------------------------GC-GAAAAC--TTTCTGCTGCGCGAGCACATCAT------CGAC-----------------------------------------------TATGAGAAGAGTC------------------AGGTCCAGGAGATAA------------------CGCAGCAGCAACAACTGCA----------------GCAGCAACAGCA------------------------------A------------CAGC---------------------------AGCAGCAA--------------------------------------------CAGC------AGCAA---------------C------AG---------CAG----------------------------------------CAA---CAGTCG----------------------------------------------------CCGCGCCTGCGTCTCAATGGCA---------------------------ACAGCGACAATGCAACAACTTTTGTCTAAGAC-------------------T--CAATCA-------------------------------------TG-CCC-----------------CAGTTTATTTTGTTTTTGTAGCG------------------------------------------------------------------------------------------------------------------------------------TCGATTCA--------------------------------------------AGTGCATTTT-----AGTTCATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................C-----------------------------------------------TATGAGAAGAGTC------------------AGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
................................................................................................................................................C------------------AGGTCCAGGAGATAA------------------CGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000001
....................................................................................................................................TATGAGAAGAGTC------------------AGGTCCAGGAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTAGCG------------------------------------------------------------------------------------------------------------------------------------TCGATTCA--------------------------------------------AGTGCATTTT-----A.......2920.501100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACAATGCAACAACTTTT.......................................................................................................................................................................................................................................................................................................................................2020.501100000
......................................................TCTGCTGCGCGAGCACATCAT------CGAC-----------------------------------------------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
...............................................................................................................................................................................................................................................................................................................................CAGCAA--------------------------------------------CAGC------AGCAA---------------C------AG---------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.204400000
...............................................................................................................................................................................................................................................................................................................................CAGCAA--------------------------------------------CAGC------AGCAA---------------C------AG---------CAG----------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
.................................................................................................................................................................................................................................................................................A------------CAGC---------------------------AGCAGCAA--------------------------------------------CAGC------AGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000020
.........................................................................................................................................................................................................................................AGCAACAGCA------------------------------A------------CAGC---------------------------AGCAGCAA--------------------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
................................................................................................................................................................................................................................................................................................................................AGCAA--------------------------------------------CAGC------AGCAA---------------C------AG---------CAG----------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102200000
.................................................................................................................................................................................................................ACTGCA----------------GCAGCAACAGCA------------------------------A------------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061001000
................................................................................................................................................................................................................................................................................................GC---------------------------AGCAGCAA--------------------------------------------CAGC------AGCAA---------------C------AG---------CAG----------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..............................................................................................................................................................................................................................................CAGCA------------------------------A------------CAGC---------------------------AGCAGCAA--------------------------------------------CAGC------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
..................................................................................................................................................................................................................................................A------------------------------A------------CAGC---------------------------AGCAGCAA--------------------------------------------CAGC------AGCAA---------------C------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
......................................................................................................................................................................................................................A----------------GCAGCAACAGCA------------------------------A------------CAGC---------------------------AGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
..................................................................................................................................................................................................................CTGCA----------------GCAGCAACAGCA------------------------------A------------CAGC---------------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.................................................................................................................................................................................................................................................................................A------------CAGC---------------------------AGCAGCAA--------------------------------------------CAGC------AGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
........................................................................................................................................................................................................................................CAGCAACAGCA------------------------------A------------CAGC---------------------------AGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
............................................................................................................................................................................................................................................AACAGCA------------------------------A------------CAGC---------------------------AGCAGCAA--------------------------------------------CAGC------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..............................................................................................................................................................................................................................................CAGCA------------------------------A------------CAGC---------------------------AGCAGCAA--------------------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
...................................................................................................................................................................................................................TGCA----------------GCAGCAACAGCA------------------------------A------------CAGC---------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droVir3
CAAAC------------------------------------GC-GAAAAC--TTTCTGCTCCGGGAGCATATCAT------TGAG-----------------------------------------------TATGAGAAAAGAC------------------AGGCACAGGAA------------GTGACCCAG-----------------------TCACAGAC-----------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------CAGCCAAGGGTCGATG-GTGCAGCAGTTACAAAAACAGAGCCGGAG---TTCTTT----------------------------------------------------TTGCGCCAGCGTCAAAATGGAAGTGATGCAG---------------CTGCTGGCGACAATGCCACAACCTATGTCTAAGAC-------------------T--ATAATACCTGAAACACGCACACGTAGCCTCCCAAATCC-----------CAAATCCGAACACTCCCATGTCCATGTTCTT-TGCCAGTGGTAATCGA-----------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------AGTGCATTTT-----AGT-TATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TGCCAGTGGTAATCGA-----------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------AGTGCATT...............2811.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACAGAGCCGGAG---TTCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCAGCGTCAAAATGGAA.........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
..............................................AAAC--TTTCTGCTCCGGGAGCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................AGAC------------------AGGCACAGGAA------------GTGACCCAG-----------------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAAATCC-----------CAAATCCGA..............................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................ATGAGAAAAGAC------------------AGGCACAGGAA------------GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGAAGTGATGCAG---------------CT...............................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................C-----------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------CAGCCAAGGGTCGATG-GTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CAGAC-----------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------CAGCCAAGGGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACACGCACACGTAGCCTCCCAA......................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-------------------T--ATAATACCTGAAACACGCACACGT................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACAGAGCCGGAG---TT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
...............................................AAC--TTTCTGCTCCGGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCTT-TGCCAGTGGTAATCGA-----------------------------------------------------------------------------------------------------------------------------------....................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAG---------------CTGCTGGCGAC......................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................AT------TGAG-----------------------------------------------TATGAGAAAAGAC------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------------------TTGCGCCAGCGTCAAAATGGAAGTGA.....................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGACAATGCCACAACCTATGTC....................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
droGri2
CAAGC------------------------------------GC-GAGAAT--TTCTTGCTGCGCGAGCACATCAT------CGAA-----------------------------------------------TTTGAGAAAAGGA------------------AGGCACACGAA------------CTGGCGCAG-----------------------ACACCGAC-----------------------------------------------A--CAGAT------------------------------------------------------------------------------GCCAC---------------------------------------------CGAC----------------GATGAGTGCAGGATTCCCTAAAAAGGAACCGGAC---GAGTCA----------------------------------------------------CTGCGACAGCGTCTCAATGGCAACGATGCGGCAAC---------CACTGCTGGCGACAATGCCACCACATATGTCTAAGACTATTACTAACTCGTGTTC----------------TAATGTTCGCGTGTTCTTC--AATTTCAACTCCTACTCAAATTCAA--ACCCCCATGTCCATGTTCTT-TGCCAGTTGAAATC-------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------AGTGCATTTT-----AGT-TGTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................AGGA------------------AGGCACACGAA------------CTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTTCGCGTGTTCTTC--AA.....................................................................................................................................................................................................................................................................2111.00110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAGGAACCGGAC---GAGTCA----------------------------------------------------CT.............................................................................................................................................................................................................................................................................................................................................................................................................2411.00101
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGAC---GAGTCA----------------------------------------------------CTGCG..........................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
droWil2
CAGGA------------------------------------GA-----AC--TATCTGCTACAGCAGCAG---TA------TCTC-------------------------------CAACAGCTG-----TA-----TCAGCAGC------------------AGATACATCAG---------------------CTGCAACAGCA-------------------------------------------------------------------ACAACAGCAGCAGCAGA---------------------------TGCAACA--------------GC---AGAT------------G---CAA---CAGC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCAGCAGATGC--------AA---------------------------CAACAGCAACA----------------GCAGC-----------------------------------AGATGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA----------------GCAGC-----------------------------------AGATGCAACAT............................................................................................................................................................................................................................................................................................................................................1970.14100010
.........................................................................................................................................................................................................CAGCA-------------------------------------------------------------------ACAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200020
.................................................................................................................................................................................................................................................................................................................................................................................CAGC------AACAA---------------C------AGC---------AG----------------------------------------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200020
...........................................................................................................................................................................................................................................................................................................................................................................CAA---CAGC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
............................................................................................................................................................................................................................................................................................................................................................................AA---CAGC------AACAA---------------C------AGC---------AG----------------------------------------CAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................A---CAGC------AACAA---------------C------AGC---------AG----------------------------------------CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
..........................................................................................................................................................................................................AGCA-------------------------------------------------------------------ACAACAGCAGCAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................AGC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................GC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05110000
.......................................................................................................................................................................................................AACAGCA-------------------------------------------------------------------ACAACAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................AA---------------C------AGC---------AG----------------------------------------CAGCAGCAGCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
........................................................................................................................................................................................................ACAGCA-------------------------------------------------------------------ACAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................AGC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
............................................................................................................................................................................................................................................................................................................................................................................AA---CAGC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................GC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................CAGC------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................C------AACAA---------------C------AGC---------AG----------------------------------------CAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
dp5
CAACA------------------------------------GC-AGCAAC--A----TCAACTGCAGCAG---CA------GCAT-------------------------------CAGCA-------------GCAGCAGCAGC------------------AACTGCAGCAGAAG------------------CAGCAACAGCA-------------------------------------------------------------------ACAACAGCAGCAGCAAC---------------------------ATAAACA--TCAACAGCAA---------------------------------CAAC------AGCAGCAGCAACATAAACAT----------------------------------------------------------------C------AGC--------AGCAA---------CAGCAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGCAGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--------AGCAA---------CAGCAG-----------------------CAGCA--------------GC..........................................................................................................................................................................................................................................................................................................................................................................................20200.501001000000000
...................................................................................................................................................................................................................................................................................................................................A--TCAACAGCAA---------------------------------CAAC------AGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
.........................................................................CA------GCAT-------------------------------CAGCA-------------GCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530200100000
.........................................................................CA------GCAT-------------------------------CAGCA-------------GCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000100200
................................................................CAGCAG---CA------GCAT-------------------------------CAGCA-------------GCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------CAGCAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGCA...................................................................................................................................................................................................28140.0710100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------------------------------C------AGC--------AGCAA---------CAGCAG-----------------------CAGCA--------------GC..........................................................................................................................................................................................................................................................................................................................................................................................24140.0710000100000
................................................................CAGCAG---CA------GCAT-------------------------------CAGCA-------------GCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010000000
.................................................................................GCAT-------------------------------CAGCA-------------GCAGCAGCAGC------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGCA...................................................................................................................................................................................................21200.0510010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCA......................................................................................................................................................................................................19200.0510000100000
.................................................................AGCAG---CA------GCAT-------------------------------CAGCA-------------GCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................AGCAA---------------------------------CAAC------AGCAGCAGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGCA...................................................................................................................................................................................................25200.0510100000000
........................................................................................................................................................................................................ACAGCA-------------------------------------------------------------------ACAACAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGCAGCAA...............................................................................................................................................................................................20200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAG.....................................................................................................................................................................................................24200.0510100000000
................................................................CAGCAG---CA------GCAT-------------------------------CAGCA-------------GCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAG.....................................................................................................................................................................................................23200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGC--------AGCAA---------CAGCAG-----------------------CAGCA--------------............................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGC--------AGCAA---------CAGCAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------...............................................................................................................................................................................................................23200.0510001000000
.....................................................................G---CA------GCAT-------------------------------CAGCA-------------GCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.....................................................................................................................AGCA-------------GCAGCAGCAGC------------------AACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.........................................................................CA------GCAT-------------------------------CAGCA-------------GCAGCAGCAGC------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
................................................................................................................................................................................G------------------CAGCAACAGCA-------------------------------------------------------------------ACAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGCAGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.22200.0510000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGC....................................................................................................................................................................................................22200.0510100000000
......................................................................................................................................................................................................CAACAGCA-------------------------------------------------------------------ACAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
.....................................................................................................................................................................................................GCAACAGCA-------------------------------------------------------------------ACAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000001000
....................................................................AG---CA------GCAT-------------------------------CAGCA-------------GCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................CAT----------------------------------------------------------------C------AGC--------AGCAA---------CAGCAG-----------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
....................................................................................................................................................................................................AGCAACAGCA-------------------------------------------------------------------ACAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG-----------------------CAGCA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGCAGCAGCA................................................................................................................................................................................................29200.0510001000000
...................................................................CAG---CA------GCAT-------------------------------CAGCA-------------GCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
droPer2
CAAGC------------------------------------GC-GAGAAT--TTCCTGCTGCGCGAACACATCAT------TGAG-----------------------------------------------TACGAGAAACAGC------------------ATGCCATGCTGCAGGCCCAGACAGCAGTCCA-------------------------------------------------------------------------------------------------------------------------------CAT-----------------------------------CCAGC---------------------------------------------AGACCAA-GAGCCAGGAGTCA------------------------------------TCGGGG-----------------------------A-----------------------TGCGCCAGCGCCATGGTGC---------------------------TGGTGATGAGGATGCCACCTCCTTTGTTTAACAG---------------------------------------------------------------------------------------------------------CC-----------------------------------------------------------------------------------------------------------------------------------TGG--GCCGTCTGCTTGCCTGCCTGCCTTTATACATATATATTTTTGTATATCCATAAGTTCAT----------TCCATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTTTGTTTAACAG---------------------------------------------------------------------------------------------------------CC-----------------------------------------------------------------------------------------------------------------------------------TG..............................................................................2012.002200000
droAna3
GCAGC------------------------------------ACCAGCAG---------CTCCAGGAGCAGAT-----------------------------------------------------------------GCAGGAGC------------------AGGTCCAGCAGCAGATCCAGGAGCAAGTCCA-------------------------------------------------------------------------------G---------CAGATGC------------AGGAACAAATGCAGGAGCAGCAGC--AGCAGCAA---------------------------------CAGC------AGCAGCCGGCGGCGGTTCAG----------------------------------------------------------------G------TGC--------AGGTT---------CAGCAG-----------------------CAGC----------------------------------------------AGGTTGGTCTTTTATTTTTTATGTTTAAAAT-------------------T--TAATTA-------------------------------------ATTATT-----------------TAATTTATTTTTTT-TTTTAGCAACAACAGCAAGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGT-TCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................GAGCAGAT-----------------------------------------------------------------GCAGGAGC------------------AGGTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...................................................................................................................................................................................................................................................................................................................CAAATGCAGGAGCAGCAGC--AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................................................................................................................AGCAA---------------------------------CAGC------AGCAGCCGGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAG----------------------------------------------------------------G------TGC--------AGGTT---------CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................GCAGCAA---------------------------------CAGC------AGCAGCCGGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.................................................................................................................................................................................................................................................................................................................AACAAATGCAGGAGCAGCAGC--AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.....................................................................................................................................................................GTCCAGCAGCAGATCCAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................GCAGGAGC------------------AGGTCCAGCAGCAGATCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000
....................................................................................................................................................................GGTCCAGCAGCAGATCCAGGAGCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
................................................................................................................................................................................................................................................................................................GC------------AGGAACAAATGCAGGAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................................................................................................TGCAGGAGCAGCAGC--AGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.672000002
.......................................................................................................................................................................CCAGCAGCAGATCCAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501100000
........................................................................................................................................................................................................................................................................................................................GCAGGAGCAGCAGC--AGCAGCAA---------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331010000
...........................................................................................................................................................................................................................................................................................................................GGAGCAGCAGC--AGCAGCAA---------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101010000
............................................................................................................................................................................................................................................................................................................................GAGCAGCAGC--AGCAGCAA---------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.061010000
.................................................................................................................................................................................................................................................................................................................................GCAGC--AGCAGCAA---------------------------------CAGC------AGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
....................................................................................................................................................................................................................................................................................................................................GC--AGCAGCAA---------------------------------CAGC------AGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droBip1
CGCAGATCTCCTGCTACAACGTGTGATCATCAGGACAGG--AG-AGATCC--GCAG------------G-----------------------------------------------------------------------------------------AC---------------AA------------------AGGCAACAGCA-------------------------------------------------------------------ACATAAGCAGCAGCCGAAG---------------------------CAGAA--------------G------------------------------CAGA------AGCAG----------------CCGCAC--CAGCAGCAGCAG----------------------------------------C---AACATTAG----------------------------------------------------CAGC-----------------A------------------------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------AC---GTGCAACATGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------TG---------C-------AACASizeHit CountTotal NormTotal
No Reads
droKik1
CAAAA------------------------------------GC-TAAAAC------AGCAGCGGCAGCACTTAAT------ACAA-----------------------------------------------CATCAGCAGCGGC------------------TGCAACA----------------------------------------------------------------------------------GCTACCACAGCTGCAACAGCAACAGCAGCAACAGCTAA---------------------------AGCTACAAC--AGCTGCAA---------------------------------AAGC------AGCAAAAAAGACGGCTACAA----------------------------------------------------------------C------AGC--------AGCAA---------CGGTGG-----------------------CAAC-----------------------------------------------AGCT-----------------------------------------------------------------------------------------------------------------------------------------ACAACTGCAGCTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGT-ATAASizeHit CountTotal NormTotal
No Reads
droFic1
CCAAG------------------------------------AG-AAAAGC--GACGGGCAACGAGGCAACAGC------------------------------------------------------------------------------------------AGC---------------------------------------AACA-------------------------------------------ACA------------------A---------CAGTAGCAA------------------C------AACAACA--------------GC---AG------------------CAG---CAGC------AACAA----------------C-----AGTAG------CAA----------------------------------------C---AACAGCAGCAACATCCA-------------------------------------GCGGCA----------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAA--------------CAAACATG--------------------CGCCATTTCCCTGGGGAGTTTTCATTTGTTGACGGCGTTGC-------------------------CAG--CCAG------------------------------------------------------TTTGC----A-TGTACASizeHit CountTotal NormTotal
No Reads
droEle1
ACGGC------------------------------------AA---CATC--TACCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------ACAAGAGC---------------------------------------AACAACAGCAG--------------C--------AGCA---------------------------------------------AGCACAGTCGCAGCAGGAGC---------AAGCACA---------------------------------------------------------------------------------G--CAACAGCAACA-------------------------------------------------GCAGGAAC--------AACAACAGCAA------TTGCTGCTGCCACAGCAG---------------------------------------------------------------------CCACACAGG---------------------------------------------------------------------------------------------------------------------------------------TAA--------------AA----AAAAAACATAGAAGATCCAAGTTTGTAATACTCAAAGTAATTTTCGTTTGATTGGAGTTTTTT-------------------------TAA--T----T----------------------------------------------------TTTTA----A-TTTAAASizeHit CountTotal NormTotal
No Reads
droRho1
AACGC------------------------------------GA---GGCC--CGTCTGCTGG---------------------AC-----------------------------------------------TTTGAGATACGCCGGCAGCAGAAGCGGGACGAGC---------------------------------------AACAGCAGCAG--------------C--------GCCAGCAGCAACAGCA------------------A---------CTGCAGC---------------------------AGCACCG--------------CG---AG------------------CAGCAGCATCAGCAG---------------------C------AGC---------GC----------------------------------------GAG---------------C--------------AA------CTGCAGCAGC----------------------------------A---------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------CACCGCGAACAGCAGCAA--------------CA----TCAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------CCASizeHit CountTotal NormTotal
No Reads
droBia1
CAACA------------------------------------GC-AGCAACACTCGAGGCGGCAGCGGCA---------------G---CAGCAG----------------------CAACGTCTG-----TG-----GCAGCAGC------------------AACACCA----------------------------------------------------------------------------------GCA------------------A---------CTGT---------------AGGAGCAACATC---AGCAACA--GCAACAACAACAACTGTAG------------------CAGCAACAGC------AGCAG---------------C------AAC---------AC----------------------------------------CAA---------------C-----------------AACTG-----------------------TAGGA--------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATCAGCAACAGCAACAA--------------CA----AC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTSizeHit CountTotal NormTotal
No Reads
droTak1
CAAGC------------------------------------GA-GAGAAT--TTCCTGCTGCGGGAGCACATCAT------CGAG-----------------------------------------------TATGAGAAGCAGC------------------ACGCCATGAAGATGGCCCACAAGGAGGTGCA-------------------------------------G---------------------------------------------------GAGG--------------------------------------------------------------------------------------------TG-------------------CCAC----------------------------------------------AAA--AGTCGGAG---AACGGC----------------------------------------------------CTGCGAAGGC------------------------------------------GCGACGAGGCCACCTCCTTTGTATAATCC-------------------T--TGATCA-------------------------------------TT-CCT-----------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTSizeHit CountTotal NormTotal
No Reads
droEug1
TGCAC------------------------------------CC-GGAGAA--TT---GCATCTGCAGCGCATGAATAGCTTTGGTCAGGATGGACAATTTCACTTTGAGTCCAATCCGGCAGCTGGTGCTTA--TCAGCAGCATC---------AACTGATTAGC---CAGTATCAG------------------CAGCAACAGCA-------------------------------------------------------------------ACAACAGCAACAGCAGCAA---------------------------CAG-----------------------------------------CAA---CAGC------AACAA----------------CCTCAG--CAGCAGCAACA----------------------------------------------------GCACCATCTA------------------------------------------------------------------------------------------------------------------GCCCAA-----------------------------------------------------------------------------------------------------------------------------CAGCAGCAGCTCATGAGGAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------ACACG---------CC------CCAGSizeHit CountTotal NormTotal
No Reads
dm3
GAGAA------------------------------------GG-AA------------------------------------------------------------------------------------------------GTC------------------AAATTCAAAGG---------------------------------------AGCCTCTACCAGCAGCA----------------------GAA------------------G---------CAGCAAC---------------------------AACAGCA--------------GC---AG------------------CAGAAGCAGTAACAGCAGCAA----------------CAAT-----------------------------------------------------------------------------------------AA------CAGCAGCAGCA----------------------------------------------------------------ACAACGACGACATCAGCTAAGTCAAAA-------------------CAATA--ATT-----------------------------------------------------------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTTATACAAACG---------CA------CATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
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..............................................................................................................................................GTC------------------AAATTCAAAGG---------------------------------------AGCCTCTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
CAAAA------------------------------------GG-TACATC------AGCAACAAGAACG-----------------------------------------------------------------------------------------ACACGAGC---------------------------------------AACAACATCAG--------------C--------AGCA---------GCA------------------A---------CTGTAGC------------------------------AGCA--------------A--------CATCAGCAGCAG----CAGCAGCAGCAGCAACTG-------------------C-----------------AA----------------------------------------CAG------C-----------------------AA------CTGCAGCAGCAACATCAA---------------------------------------------------------------------G-------CGCA------ATCAGCAAATTGCATTAAATG--ACT-----------------------------------------------------------------TTGTATTGCAATTGT-----------------------------------------------------------------------------------------------------------------------------------TGG--C----TC---------------------------------------------------TCCC-----AGT-GATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................ACAACATCAG--------------C--------AGCA---------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16140.07100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................G-------------------C-----------------AA----------------------------------------CAG------C-----------------------AA------CTGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGCAGCAG----CAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................CAG----CAGCAGCAGCAGCAACTG-------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000000000
..................................................................................................................................................................................................................................................................................................................................................A--------CATCAGCAGCAG----CAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000001000000000
droSec2
CGCAGC-----------------------------------AACTGCAAC------AGCAGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------CAA----------------------CTGCAACAGCAGCGGCA------------------A---------CTGCAAC---------------------------AGCAGCC--------------GC---AA------------------CTGCAGCAGCAACAA---------------------C------ATC---------AC----------------------------------------CAA---------------CTA--------------------------------------------------------------GCA---------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------CACCAGAAATAGGAACAA--------------CA----TAGGT--------------------CA----------------------------GGCGTAACGAGTCATTCATGTTGCAGATATTGTTGGTATCATTTCG--------------------------------------------GCTGCTT-------------TTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GCCGC------------------------------------AGCAGCAA---CTGCAGCAGCAACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------CAGA---------------------------GGCAACTC--------------------------------------------CAGC------------------------------------AGCAACA-CAGCAACGGGTAA----------------------------------------------------------------------------------------GCGGCA----------------GCAGCA--------A----CTGCAATGAC-------GATTTGTGGCCAA-----------------------------------------TTA-------------------------------------TT-TCA-----------------AATATTGTATTGAAATTGT-----------------------------------------------------------------------------------------------------------------------------------AGG--CCAGTTTG--------------------------------------------AGTGTGTGCT-----AG-----TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................AGCAA---CTGCAGCAGCAACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17101000000000
..........................................GCAGCAA---CTGCAGCAGCAACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.13101000000000
droEre2
CATGCGCCAACCACGACCGCGTTTGCCTATCAGAACGGCCACC-A-------------------------------------------------------------------------------------------AAGACGGCC------------------AGGCACAGCGG---------------------------------------CAACACCACCAGCAACA----------------------GCA------------------G---------CAGCAGC---------------------------AGCAACA--------------GC---AA------------------CAGCAACAGCAAAAGCAGCAA----------------CAGC-----------------------------------------------------------------------------------------AG------CAGCAGCAGCAACACCATCGGCA----------------ACGGCA---------------------------ACGGCAA--------CA--------------------------------CA---------------------------------------------------------------------------------CGACGGT-----------CGGCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAGA-TTCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................AGCAACA----------------------GCA------------------G---------CAGCAGC---------------------------AGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530003000
...........................................................................................................................................................................................................................................................................................................................................................................................AGCAA----------------CAGC-----------------------------------------------------------------------------------------AG------CAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530003000
..............................................................................................................................................................................................................................CAGCAACA----------------------GCA------------------G---------CAGCAGC---------------------------AG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..........................................................................................................................................................................................................................................................................................................................................................................................CAGCAA----------------CAGC-----------------------------------------------------------------------------------------AG------CAGCAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..................................................................................................................................................................................................................................................................................................................................................................................................................GC-----------------------------------------------------------------------------------------AG------CAGCAGCAGCAACACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100

Generated: 05/17/2015 at 10:19 PM