ID:

dmo_41

Coordinate:

scaffold_6500:2474514-2474577 -

Confidence:

Known Ortholog

Class:

Canonical miRNA

Genomic Locale:

3pUTR

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.6 -30.5 -30.3

Flybase annnotation

utr3 [utr3_minus_42]

No Repeatable elements found

Sense Strand Reads

AGATTCACAAGATATTTTAACAAATGTGAACAAAACACTCAAATGTTTAGGGGGTCAAACTGTACGTTGTATGTGTAAACAATGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGGAATCAACAGCAATTTAAGCATAGCTACTATATATAGT

***********************************((((..(((.(((((((((..((.(((((((((.((((.((..........)).))))))))))))).))..))))))))).)))..))))..************************************
Read size # Mismatch Hit Count Total Norm Total M060

embryo

M046

female body

V041

embryo

V110

male body
V056

head

V049

head

...........................................................................................TAAGCGTATAGCTTTTCCCCTT................................................... 22 0 1 61502.00 61502 31132 29347 643 112 153 115
...........................................................................................TAAGCGTATAGCTTTTCCCCT.................................................... 21 0 1 15238.00 15238 10237 4796 62 46 49 48
...........................................................................................TAAGCGTATAGCTTTTCCCCTC................................................... 22 1 1 2976.00 2976 2819 152 2 1 2 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTT.................................................. 23 1 1 2173.00 2173 1152 935 62 10 6 8
...........................................................................................TAAGCGTATAGCTTTTCCCCC.................................................... 21 1 1 2071.00 2071 2068 2 0 0 1 0
............................................................................................AAGCGTATAGCTTTTCCCCTT................................................... 21 0 1 2056.00 2056 92 1962 2 0 0 0
..................................................GGGGTCAAACTGTACGTTGTATG........................................................................................... 23 0 1 1483.00 1483 546 165 639 86 27 20
...........................................................................................TGAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 1225.00 1225 1218 5 1 0 0 1
...........................................................................................TAAGCGTATAGCTTTTCCCC..................................................... 20 0 1 961.00 961 644 301 7 1 5 3
...........................................................................................TAAGCGTATAGCTTTTCCCCTTA.................................................. 23 0 1 524.00 524 262 239 17 1 3 2
...........................................................................................TAAGCGTATAGCTTTTCCCCTTC.................................................. 23 1 1 483.00 483 152 319 5 4 2 1
...........................................................................................TGAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 448.00 448 447 1 0 0 0 0
..........................................................................................CTAAGCGTATAGCTTTTCCCCTT................................................... 23 1 1 407.00 407 335 72 0 0 0 0
...........................................................................................TAATCGTATAGCTTTTCCCCTT................................................... 22 1 1 389.00 389 377 12 0 0 0 0
.............................................................................................AGCGTATAGCTTTTCCCCTT................................................... 20 0 1 341.00 341 13 328 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCT.................................................... 20 0 1 281.00 281 21 260 0 0 0 0
...........................................................................................TTAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 239.00 239 239 0 0 0 0 0
...........................................................................................TAAGCGTATAGATTTTCCCCTT................................................... 22 1 1 199.00 199 109 89 0 0 1 0
...........................................................................................TAAGCGTCTAGCTTTTCCCCTT................................................... 22 1 1 199.00 199 198 1 0 0 0 0
...........................................................................................TAAGCGTATAGGTTTTCCCCTT................................................... 22 1 1 174.00 174 22 152 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAA................................................. 24 0 1 173.00 173 60 82 31 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTA................................................... 22 1 1 162.00 162 50 108 3 1 0 0
...........................................................................................TAAGCTTATAGCTTTTCCCCTT................................................... 22 1 1 140.00 140 130 9 1 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAA................................................ 25 0 1 138.00 138 8 124 4 1 1 0
...........................................................................................TAATCGTATAGCTTTTCCCCT.................................................... 21 1 1 136.00 136 134 2 0 0 0 0
...........................................................................................TAAGCGGATAGCTTTTCCCCTT................................................... 22 1 1 130.00 130 121 2 4 0 2 1
..................................................GTGGTCAAACTGTACGTTGTATG........................................................................................... 23 1 1 125.00 125 125 0 0 0 0 0
...........................................................................................GAAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 117.00 117 105 10 2 0 0 0
...........................................................................................TGAGCGTATAGCTTTTCCCCTC................................................... 22 2 1 111.00 111 111 0 0 0 0 0
...........................................................................................TGAGCGTATAGCTTTTCCCCC.................................................... 21 2 1 107.00 107 107 0 0 0 0 0
..........................................................................................GTAAGCGTATAGCTTTTCCCCTT................................................... 23 1 1 103.00 103 2 101 0 0 0 0
...........................................................................................TACGCGTATAGCTTTTCCCCTT................................................... 22 1 1 102.00 102 100 1 0 0 1 0
...........................................................................................CAAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 95.00 95 84 10 1 0 0 0
...........................................................................................TTAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 80.00 80 80 0 0 0 0 0
..................................................GGGGTCAAACTGTACGTTGTAT............................................................................................ 22 0 1 79.00 79 30 5 40 4 0 0
...........................................................................................TAAGCGTATAGCTTTCCCCC..................................................... 20 1 1 76.00 76 76 0 0 0 0 0
...........................................................................................TAAGTGTATAGCTTTTCCCCTT................................................... 22 1 1 75.00 75 63 9 2 0 1 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTG.................................................. 23 1 1 75.00 75 15 52 2 0 5 1
...........................................................................................TAAGCGTCTAGCTTTTCCCCT.................................................... 21 1 1 75.00 75 75 0 0 0 0 0
...........................................................................................AAAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 74.00 74 64 10 0 0 0 0
..........................................................................................CTAAGCGTATAGCTTTTCCCCT.................................................... 22 1 1 72.00 72 63 9 0 0 0 0
...........................................................................................TAAGCGTATAGATTTTCCCCT.................................................... 21 1 1 65.00 65 59 6 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCC...................................................... 19 0 1 56.00 56 42 12 0 1 1 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTT................................................. 24 2 1 53.00 53 21 28 2 0 2 0
...........................................................................................TAAGCGTATAGCTTTCCCCCTT................................................... 22 1 1 52.00 52 46 5 0 1 0 0
...........................................................................................TGAGCGTATAGCTTTTCCCCTTT.................................................. 23 2 1 51.00 51 51 0 0 0 0 0
..........................................................................................TTAAGCGTATAGCTTTTCCCCTT................................................... 23 1 1 51.00 51 4 47 0 0 0 0
..........................................................................................ATAAGCGTATAGCTTTTCCCCTT................................................... 23 0 1 50.00 50 3 47 0 0 0 0
...........................................................................................TAAGCTTATAGCTTTTCCCCT.................................................... 21 1 1 50.00 50 49 1 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA............................................... 26 0 1 49.00 49 6 42 1 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCTTT................................................... 22 1 1 45.00 45 43 2 0 0 0 0
...........................................................................................TAAGCGTACAGCTTTTCCCCTT................................................... 22 1 1 45.00 45 38 5 1 0 1 0
............................................................................................AAGCGTATAGCTTTTCCCCTTT.................................................. 22 1 1 45.00 45 2 43 0 0 0 0
...........................................................................................TAATCGTATAGCTTTTCCCCTC................................................... 22 2 1 45.00 45 45 0 0 0 0 0
...........................................................................................TAAGCGTATAGCCTTTCCCCTT................................................... 22 1 1 43.00 43 18 20 1 3 1 0
...........................................................................................TGAGCGTATAGCTTTTCCCC..................................................... 20 1 1 41.00 41 41 0 0 0 0 0
...........................................................................................TAAGCGGATAGCTTTTCCCCT.................................................... 21 1 1 41.00 41 40 1 0 0 0 0
...........................................................................................TAAGCGCATAGCTTTTCCCCTT................................................... 22 1 1 40.00 40 27 10 2 1 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCCT................................................... 22 1 1 38.00 38 29 8 1 0 0 0
...........................................................................................GAAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 38.00 38 37 1 0 0 0 0
...........................................................................................TAAGCGTATAGGTTTTCCCCT.................................................... 21 1 1 38.00 38 5 33 0 0 0 0
...........................................................................................TAGGCGTATAGCTTTTCCCCTT................................................... 22 1 1 36.00 36 19 16 1 0 0 0
...........................................................................................TAAGCGTATAGTTTTTCCCCTT................................................... 22 1 1 36.00 36 15 21 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCC..................................................... 19 0 1 34.00 34 1 33 0 0 0 0
..........................................................................................CTAAGCGTATAGCTTTTCCCCTC................................................... 23 2 1 34.00 34 34 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA.............................................. 27 1 1 33.00 33 0 31 1 1 0 0
...........................................................................................TAAGCGTGTAGCTTTTCCCCTT................................................... 22 1 1 33.00 33 19 12 1 1 0 0
..................................................GGGGTCAAACTGTACGTTGTA............................................................................................. 21 0 1 32.00 32 22 8 2 0 0 0
...............................................................................................CGTATAGCTTTTCCCCTT................................................... 18 0 1 31.00 31 7 24 0 0 0 0
.........................................................................................TCTAAGCGTATAGCTTTTCCCCTT................................................... 24 2 1 31.00 31 30 1 0 0 0 0
..............................................................................................GCGTATAGCTTTTCCCCTT................................................... 19 0 1 30.00 30 4 26 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCGT................................................... 22 1 1 29.00 29 28 1 0 0 0 0
...........................................................................................TAAGCGTATAACTTTTCCCCTT................................................... 22 1 1 29.00 29 24 4 1 0 0 0
.............................................................................................AGCGTATAGCTTTTCCCCT.................................................... 19 0 1 28.00 28 5 22 0 0 0 1
...........................................................................................TAAGCGTATAGCTTTTCCCCA.................................................... 21 1 1 28.00 28 9 19 0 0 0 0
..........................................................................................CGAAGCGTATAGCTTTTCCCCTT................................................... 23 2 1 27.00 27 27 0 0 0 0 0
...........................................................................................TAAGTGTATAGCTTTTCCCCT.................................................... 21 1 1 25.00 25 25 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTGCCCCTT................................................... 22 1 1 24.00 24 16 8 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCTCCTT................................................... 22 1 1 24.00 24 21 2 1 0 0 0
...........................................................................................TAATCGTATAGCTTTTCCCCC.................................................... 21 2 1 24.00 24 24 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCTCTT................................................... 22 1 1 23.00 23 21 2 0 0 0 0
...........................................................................................CAAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 23.00 23 21 1 0 0 0 1
...........................................................................................TAAGCGTATAGCTTTCCCCTT.................................................... 21 2 1 23.00 23 7 15 0 1 0 0
...........................................................................................TAACCGTATAGCTTTTCCCCTT................................................... 22 1 1 23.00 23 19 4 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTA................................................. 24 1 1 23.00 23 13 8 2 0 0 0
...........................................................................................TACGCGTATAGCTTTTCCCCT.................................................... 21 1 1 22.00 22 21 1 0 0 0 0
........................................................................................ATCTAAGCGTATAGCTTTTCCCCTT................................................... 25 3 1 22.00 22 21 0 1 0 0 0
...........................................................................................TAAGCATATAGCTTTTCCCCTT................................................... 22 1 1 21.00 21 15 6 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTC................................................. 24 2 1 21.00 21 6 15 0 0 0 0
..................................................GGGGTCAAACTGTACGTTGT.............................................................................................. 20 0 1 20.00 20 12 2 4 0 2 0
............................................................................................AAGCGTATAGCTTTTCCCCTTA.................................................. 22 0 1 20.00 20 0 20 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTTCCCTT................................................... 22 1 1 20.00 20 14 5 0 1 0 0
...........................................................................................AAAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 20.00 20 20 0 0 0 0 0
...........................................................................................TAAGCGTACAGCTTTTCCCCT.................................................... 21 1 1 20.00 20 16 4 0 0 0 0
...........................................................................................TAAGCGTATAGCTTCTCCCCTT................................................... 22 1 1 19.00 19 13 6 0 0 0 0
...........................................................................................TAAGCGTATTGCTTTTCCCCTT................................................... 22 1 1 19.00 19 16 1 2 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCTT.................................................... 21 1 1 19.00 19 19 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTAA.................................................. 23 1 1 18.00 18 2 16 0 0 0 0
...........................................................................................TTAGCGTATAGCTTTTCCCCC.................................................... 21 2 1 18.00 18 18 0 0 0 0 0
...........................................................................................TAAGCGTATAGTTTTTCCCCT.................................................... 21 1 1 18.00 18 15 3 0 0 0 0
...........................................................................................TAAGCGTCTAGCTTTTCCCCC.................................................... 21 2 1 18.00 18 18 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTCTTCCCCTT................................................... 22 1 1 17.00 17 8 9 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTC................................................... 21 1 1 17.00 17 11 6 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTTC.................................................. 22 1 1 17.00 17 1 16 0 0 0 0
...........................................................................................TAAGCGAATAGCTTTTCCCCTT................................................... 22 1 1 17.00 17 12 5 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTAAA................................................. 24 1 1 17.00 17 1 16 0 0 0 0
...........................................................................................TAAACGTATAGCTTTTCCCCTT................................................... 22 1 1 17.00 17 10 7 0 0 0 0
..........................................................................................GTAAGCGTATAGCTTTTCCCCT.................................................... 22 1 1 16.00 16 0 16 0 0 0 0
..........................................................................................CTATGCGTATAGCTTTTCCCCTT................................................... 23 2 1 16.00 16 16 0 0 0 0 0
..........................................................................................CTAAGCGTATAGCTTTTCCCCC.................................................... 22 2 1 16.00 16 16 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTAA................................................ 25 1 1 16.00 16 8 6 2 0 0 0
...........................................................................................TAAGCGTCTAGCTTTTCCCCTC................................................... 22 2 1 16.00 16 16 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTAAAAA............................................... 26 1 1 15.00 15 0 14 0 1 0 0
...........................................................................................TTAGCGTATAGCTTTTCCCCTC................................................... 22 2 1 15.00 15 15 0 0 0 0 0
...........................................................................................TAAGCGTATGGCTTTTCCCCTT................................................... 22 1 1 15.00 15 7 6 1 1 0 0
..........................................................................................CTAAGCGTATAGCTTTTCCCCTTT.................................................. 24 2 1 15.00 15 11 4 0 0 0 0
...........................................................................................TAAGCTTATAGCTTTTCCCCC.................................................... 21 2 1 15.00 15 15 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTACCCCTT................................................... 22 1 1 15.00 15 9 6 0 0 0 0
..................................................GGGGTCAAACTGTACGTTGTATT........................................................................................... 23 1 1 15.00 15 2 0 12 0 0 1
...........................................................................................TAAGCGTATAGCTTTTCCTCT.................................................... 21 1 1 15.00 15 14 0 1 0 0 0
...........................................................................................TAAGCGTATAGCCTTTCCCCT.................................................... 21 1 1 14.00 14 8 6 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAT................................................. 24 1 1 14.00 14 3 4 6 1 0 0
...........................................................................................TAATCGTATAGCTTTTCCCCTTT.................................................. 23 2 1 13.00 13 13 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTCCCCCT.................................................... 21 1 1 12.00 12 10 1 0 0 1 0
..................................................GTGGTCAAACTGTACGTTGTAT............................................................................................ 22 1 1 12.00 12 12 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTAAAA................................................ 25 1 1 12.00 12 1 11 0 0 0 0
...........................................................................................TAAGCGTATAGGTTTTCCCCTTT.................................................. 23 2 1 12.00 12 2 10 0 0 0 0
...........................................................................................TTAGCGTATAGCTTTTCCCC..................................................... 20 1 1 12.00 12 12 0 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTTAAA................................................ 24 0 1 12.00 12 0 12 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTG................................................... 22 1 1 12.00 12 4 7 0 0 0 1
..................................................GGGTTCAAACTGTACGTTGTATG........................................................................................... 23 1 1 11.00 11 10 0 0 1 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTAAAA.............................................. 27 2 1 11.00 11 1 10 0 0 0 0
...........................................................................................AAAGCGTATAGCTTTTCCCCTC................................................... 22 2 1 11.00 11 11 0 0 0 0 0
...........................................................................................TAAGCGGATAGCTTTTCCCCTC................................................... 22 2 1 11.00 11 11 0 0 0 0 0
..........................................................................................CGAAGCGTATAGCTTTTCCCCT.................................................... 22 2 1 11.00 11 11 0 0 0 0 0
...................................................GGGTCAAACTGTACGTTGTATG........................................................................................... 22 0 1 10.00 10 0 8 1 1 0 0
...........................................................................................TAAGCTTATAGCTTTTCCCCTC................................................... 22 2 1 10.00 10 10 0 0 0 0 0
..................................................GGCGTCAAACTGTACGTTGTATG........................................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
...........................................................................................GAAGCGTATAGCTTTTCCCCTC................................................... 22 2 1 10.00 10 10 0 0 0 0 0
..................................................GGGGTCAAACTGTACGTTGTATC........................................................................................... 23 1 1 10.00 10 8 0 2 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCA..................................................... 20 1 1 10.00 10 2 8 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTGG................................................. 24 2 1 10.00 10 1 9 0 0 0 0
..........................................................................................ATAAGCGTATAGCTTTTCCCCT.................................................... 22 0 1 9.00 9 4 5 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTA................................................... 21 1 1 9.00 9 0 9 0 0 0 0
...........................................................................................TAAGCGTATAGCATTTCCCCTT................................................... 22 1 1 9.00 9 8 1 0 0 0 0
...........................................................................................TAAGCGTATAGATTTTCCCCC.................................................... 21 2 1 9.00 9 9 0 0 0 0 0
.........................................................................................TCTAAGCGTATAGCTTTTCCCCT.................................................... 23 2 1 9.00 9 9 0 0 0 0 0
...........................................................................................TAAGCGCATAGCTTTTCCCCT.................................................... 21 1 1 9.00 9 7 2 0 0 0 0
.........................................................................................CCTAAGCGTATAGCTTTTCCCCTT................................................... 24 1 1 9.00 9 5 4 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA............................................. 28 2 1 9.00 9 1 8 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTGCCCTT................................................... 22 1 1 9.00 9 8 1 0 0 0 0
...........................................................................................TAGGCGTATAGCTTTTCCCCT.................................................... 21 1 1 9.00 9 9 0 0 0 0 0
...........................................................................................TACGCGTATAGCTTTTCCCCTC................................................... 22 2 1 9.00 9 9 0 0 0 0 0
...........................................................................................TAAGCGTATATCTTTTCCCCTT................................................... 22 1 1 9.00 9 3 6 0 0 0 0
...........................................................................................GAAGCGTATAGCTTTTCCCCC.................................................... 21 2 1 9.00 9 9 0 0 0 0 0
............................................................................................AAGCGTATAGCGTTTCCCCTT................................................... 21 1 1 9.00 9 0 9 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTACCCTT................................................... 22 1 1 9.00 9 3 2 3 0 0 1
...........................................................................................TAAGCGTATACCTTTTCCCCTT................................................... 22 1 1 9.00 9 6 2 1 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTG................................................. 24 2 1 8.00 8 0 8 0 0 0 0
...........................................................................................TAAGCGTGTAGCTTTTCCCCT.................................................... 21 1 1 8.00 8 6 1 0 0 0 1
...........................................................................................TAAGCGTATAGCTTTTCCTCTC................................................... 22 2 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAACCGTATAGCTTTTCCCCT.................................................... 21 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAGTGTATAGCTTTTCCCCTC................................................... 22 2 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCACCTT................................................... 22 1 1 8.00 8 1 6 0 0 1 0
...........................................................................................TGAGCGTATAGCTTTTCCCCTTA.................................................. 23 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAGCGTTTAGCTTTTCCCCTT................................................... 22 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTGCCCCT.................................................... 21 1 1 8.00 8 7 1 0 0 0 0
...........................................................................................TAAGAGTATAGCTTTTCCCCTT................................................... 22 1 1 8.00 8 2 1 5 0 0 0
...........................................................................................TAAGCGTATAGCTGTTCCCCTT................................................... 22 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAGCGGATAGCTTTTCCCCC.................................................... 21 2 1 8.00 8 8 0 0 0 0 0
............................................................................................AGGCGTATAGCTTTTCCCCTT................................................... 21 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCG.................................................... 21 1 1 8.00 8 7 0 0 0 1 0
..................................................GTGGTCAAACTGTACGTTGTA............................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCCTT.................................................. 23 2 1 8.00 8 6 2 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCC.................................................... 20 1 1 7.00 7 7 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCACTT................................................... 22 1 1 7.00 7 3 3 0 0 1 0
...........................................................................................TAAGCGTATAGCTTTTCCCT..................................................... 20 1 1 7.00 7 4 3 0 0 0 0
...........................................................................................TAAGCCTATAGCTTTTCCCCTT................................................... 22 1 1 7.00 7 2 5 0 0 0 0
...........................................................................................TAATCGTATAGCTTTTCCCC..................................................... 20 1 1 7.00 7 7 0 0 0 0 0
...........................................................................................TTAGCGTATAGCTTTTCCCCTTT.................................................. 23 2 1 7.00 7 7 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTTT................................................ 25 3 1 7.00 7 0 6 0 0 0 1
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTAAAAA............................................. 28 3 1 7.00 7 0 7 0 0 0 0
...........................................................................................CAAGCGTATAGCTTTTCCCCTC................................................... 22 2 1 7.00 7 7 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCTTC................................................... 22 2 1 6.00 6 6 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCAA................................................... 22 2 1 6.00 6 0 6 0 0 0 0
..........................................................................................CGATGCGTATAGCTTTTCCCCTT................................................... 23 3 1 6.00 6 6 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCTCCT.................................................... 21 1 1 6.00 6 5 0 0 0 0 1
..........................................................................................GTAAGCGTATAGCTTTTCCCCTTT.................................................. 24 2 1 6.00 6 0 6 0 0 0 0
..................................................GGGGTCAAACTGTACGTTGTATGA.......................................................................................... 24 1 1 6.00 6 0 0 6 0 0 0
...........................................................................................TAAGCGTATAGCTTTTGCCCT.................................................... 21 1 1 6.00 6 5 1 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTAAA............................................... 26 1 1 6.00 6 0 6 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTTAA................................................. 23 0 1 6.00 6 0 6 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTCA................................................. 24 1 1 6.00 6 0 6 0 0 0 0
...........................................................................................TAAGCGTATAGCTTATCCCCTT................................................... 22 1 1 6.00 6 3 3 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCCC................................................... 22 2 1 6.00 6 4 2 0 0 0 0
...........................................................................................TGAGCGTATAGCTTTTCCCCTTAA................................................. 24 1 1 6.00 6 6 0 0 0 0 0
...........................................................................................TAAGCATATAGCTTTTCCCCT.................................................... 21 1 1 6.00 6 6 0 0 0 0 0
............................................................................................TAACGTATAGCTTTTCCCCTT................................................... 21 2 1 6.00 6 6 0 0 0 0 0
.............................................................................................AGCGTATAGCTTTTCCCCTTT.................................................. 21 1 1 6.00 6 0 6 0 0 0 0
...........................................................................................TAAGTGGATAGCTTTTCCCCTT................................................... 22 2 1 6.00 6 4 0 2 0 0 0
..................................................GTGTTCAAACTGTACGTTGTATG........................................................................................... 23 2 1 6.00 6 6 0 0 0 0 0
...........................................................................................TAATCGGATAGCTTTTCCCCTT................................................... 22 2 1 6.00 6 6 0 0 0 0 0
...........................................................................................CAAGCGTATAGCTTTTCCCCC.................................................... 21 2 1 6.00 6 6 0 0 0 0 0
.........................................................................TGTAAACAATGAAATCCA......................................................................... 18 0 1 5.00 5 3 0 2 0 0 0
...........................................................................................TAAGCGTATAGCTTTCCCCCTTT.................................................. 23 2 1 5.00 5 3 2 0 0 0 0
..........................................................................................CGAAGCGTATAGCTTTTCCCCTC................................................... 23 3 1 5.00 5 5 0 0 0 0 0
..................................................GGGGTCAAACTGTACGTTGC.............................................................................................. 20 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTAT................................................ 25 2 1 5.00 5 1 0 3 1 0 0
...........................................................................................TGAGCGGATAGCTTTTCCCCTT................................................... 22 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCGTATAGATTTTCCCCTC................................................... 22 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCGTCTAGCTTTTCCCC..................................................... 20 1 1 5.00 5 5 0 0 0 0 0
..................................................GGGGTCAAACTGTACGTTGTCTG........................................................................................... 23 1 1 5.00 5 0 0 5 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTTAAAA............................................... 25 0 1 5.00 5 0 5 0 0 0 0
...........................................................................................TAAGCGTCTAGCTTTTCCCCTTT.................................................. 23 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCGTATCGCTTTTCCCCTT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAG................................................ 25 1 1 5.00 5 0 5 0 0 0 0
...........................................................................................GAAGCGTATAGCTTTTCCCCTTT.................................................. 23 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAATCGTATAGCTTTTCCCCTTA.................................................. 23 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCTC.................................................... 21 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAATCGTCTAGCTTTTCCCCTT................................................... 22 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCGCCTT................................................... 22 1 1 5.00 5 4 0 1 0 0 0
...........................................................................................TACGCGTATAGCTTTTCCCCC.................................................... 21 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCTTATAGCTTTTCCCCTTT.................................................. 23 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCATT................................................... 22 1 1 5.00 5 3 2 0 0 0 0
..............................................................................................GCGTATAGCTTTTCCCCTTT.................................................. 20 1 1 5.00 5 1 4 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAC................................................. 24 1 1 5.00 5 3 1 1 0 0 0
...........................................................................................TATGCGTATAGCTTTTCCCCTT................................................... 22 1 1 5.00 5 4 1 0 0 0 0
............................................................................................AGGCGTATAGCTTTTCCCCT.................................................... 20 1 1 5.00 5 4 1 0 0 0 0
..................................................GGGGCCAAACTGTACGTTGTATG........................................................................................... 23 1 1 5.00 5 4 0 1 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTTG.................................................. 22 1 1 5.00 5 0 5 0 0 0 0
...........................................................................................TGAGCGTCTAGCTTTTCCCCTT................................................... 22 2 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTCTCCCCT.................................................... 21 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTCA.................................................. 23 1 1 4.00 4 2 2 0 0 0 0
...........................................................................................TAAGCGTATAGATTTTCCCCTTT.................................................. 23 2 1 4.00 4 3 1 0 0 0 0
..........................................................................................ATAAGCGTATAGCTTTTCCCCTTT.................................................. 24 1 1 4.00 4 0 4 0 0 0 0
............................................................................................AACCGTATAGCTTTTCCCCTT................................................... 21 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................CTAAGCGTATAGCTTTTCCCC..................................................... 21 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGCGGATAGCTTTTCCCCTTT.................................................. 23 2 1 4.00 4 3 0 0 0 0 1
..................................................GGGGTCAAACTGTACGTTGTATGC.......................................................................................... 24 1 1 4.00 4 3 0 0 0 1 0
...........................................................................................TAAGCGTATAGCTTATCCCCT.................................................... 21 1 1 4.00 4 2 2 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTCC.................................................. 23 2 1 4.00 4 0 4 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTCT................................................. 24 2 1 4.00 4 0 4 0 0 0 0
...........................................................................................TGAGTGTATAGCTTTTCCCCTT................................................... 22 2 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGCGTATAGATTTTCCCCTTA.................................................. 23 1 1 4.00 4 2 2 0 0 0 0
............................................................................................AAGCGTATAGCATTTCCCCTT................................................... 21 1 1 4.00 4 0 4 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCTCC.................................................... 21 2 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTTCC................................................ 25 3 1 4.00 4 0 4 0 0 0 0
.........................................................................................GCTAAGCGTATAGCTTTTCCCCTT................................................... 24 2 1 4.00 4 0 4 0 0 0 0
..............................................................................................GCGTATAGCTTTTCCCCT.................................................... 18 0 1 4.00 4 2 2 0 0 0 0
.........................................................................................ATTAAGCGTATAGCTTTTCCCCTT................................................... 24 2 1 4.00 4 0 4 0 0 0 0
..........................................................................................CTAAGCGTATAGCTTTTCCCCTTA.................................................. 24 1 1 4.00 4 2 2 0 0 0 0
..........................................................................................TTAAGCGTATAGCTTTTCCCCTTT.................................................. 24 2 1 4.00 4 1 3 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAAA............................................ 29 3 1 4.00 4 0 4 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTCCCCCTC................................................... 22 2 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTCT.................................................. 23 2 1 4.00 4 1 3 0 0 0 0
..................................................GGGGTCAAACTGTACGCTGTATG........................................................................................... 23 1 1 4.00 4 0 0 4 0 0 0
...........................................................................................TAAGCGTATAGCTTTACCCCT.................................................... 21 1 1 4.00 4 2 2 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTCC................................................. 24 2 1 4.00 4 1 3 0 0 0 0
...........................................................................................TAAGCGTAAAGCTTTTCCCCTT................................................... 22 1 1 4.00 4 1 3 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAG................................................. 24 1 1 4.00 4 2 1 1 0 0 0
..........................................................................................TTAAGCGTATAGCTTTTCCCCT.................................................... 22 1 1 4.00 4 0 4 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAC................................................ 25 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTCCCCTC.................................................... 21 3 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCACCT.................................................... 21 1 1 4.00 4 3 0 1 0 0 0
..................................................GGGGTCAAACTGTACGTTG............................................................................................... 19 0 1 4.00 4 1 3 0 0 0 0
...........................................................................................TGAGCGGATAGCTTTTCCCCT.................................................... 21 2 1 4.00 4 4 0 0 0 0 0
........................................................................................ATATAAGCGTATAGCTTTTCCCCTT................................................... 25 2 1 4.00 4 2 2 0 0 0 0
........................................................................................AGCTAAGCGTATAGCTTTTCCCCTT................................................... 25 3 1 4.00 4 4 0 0 0 0 0
.............................................................................................AGCGTATAGCTTTTCCCCC.................................................... 19 1 1 4.00 4 4 0 0 0 0 0
........................................................................................ATCTAAGCGTATAGCTTTTCCCCT.................................................... 24 3 1 4.00 4 3 1 0 0 0 0
...........................................................................................TCAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 4.00 4 2 1 1 0 0 0
........................................................................................AACTAAGCGTATAGCTTTTCCCCTT................................................... 25 3 1 3.00 3 0 3 0 0 0 0
...........................................................................................TAACCGTATAGCTTTTCCCCTTT.................................................. 23 2 1 3.00 3 3 0 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTTTT................................................. 23 2 1 3.00 3 0 3 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAT................................................ 25 1 1 3.00 3 3 0 0 0 0 0
..................................................GGGGTCAAACTGTACGGTGTATG........................................................................................... 23 1 1 3.00 3 0 0 2 0 0 1
..........................................................................................CCAAGCGTATAGCTTTTCCCCTT................................................... 23 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTACA................................................ 25 1 1 3.00 3 2 0 1 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTAAAC............................................... 26 1 1 3.00 3 2 1 0 0 0 0
...........................................................................................TGAGCTTATAGCTTTTCCCCT.................................................... 21 2 1 3.00 3 3 0 0 0 0 0
............................................................................................AAGCGTATAGCCTTTCCCCTT................................................... 21 1 1 3.00 3 0 3 0 0 0 0
............................................................................................AAGCGTATAGCGTTTCCCCT.................................................... 20 1 1 3.00 3 0 3 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCAT................................................... 22 1 1 3.00 3 1 2 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTAAAAAA.............................................. 27 2 1 3.00 3 0 3 0 0 0 0
...........................................................................................TAAGCGCATAGCTTTTCCCCTTC.................................................. 23 2 1 3.00 3 1 1 0 0 1 0
..................................................GCGGTCAAACTGTACGTTGTATG........................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TGAGCGTATAGCTTTCCCCC..................................................... 20 2 1 3.00 3 3 0 0 0 0 0
............................................................................................AAGCGTATAGCTTTTCCCCTAAAAA............................................... 25 1 1 3.00 3 0 3 0 0 0 0
...........................................................................................TAAGCGTATAGCTGTTCCCCT.................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TACGCGTATAGCTTTTCCCC..................................................... 20 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTACCCCC.................................................... 21 2 1 3.00 3 3 0 0 0 0 0
..................................................GGGGTCAAACTGTACGTTGTATGCC......................................................................................... 25 2 1 3.00 3 2 1 0 0 0 0
...........................................................................................TAAGCGTATAGTTTTTCCCCTTT.................................................. 23 2 1 3.00 3 1 2 0 0 0 0
...........................................................................................TACTCGTATAGCTTTTCCCCTT................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..................................................GGTGTCAAACTGTACGTTGTATG........................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
..................................................GTGGTCACACTGTACGTTGTATG........................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................TGAGCTTATAGCTTTTCCCCTT................................................... 22 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGTGTATAGCTTTTCCCCC.................................................... 21 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAACGTATAGCTTTTCCCCTTT.................................................. 23 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGCGTATAACTTTTCCCCC.................................................... 21 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGCGTATAGCTTTTCCCCTTGGCA............................................... 26 3 1 3.00 3 2 1 0 0 0 0

Anti-sense strand reads

TCTAAGTGTTCTATAAAATTGTTTACACTTGTTTTGTGAGTTTACAAATCCCCCAGTTTGACATGCAACATACACATTTGTTACTTTAGGTATTCGCATATCGAAAAGGGGAATTTTCAACTTCACCTTAGTTGTCGTTAAATTCGTATCGATGATATATATCA

************************************((((..(((.(((((((((..((.(((((((((.((((.((..........)).))))))))))))).))..))))))))).)))..))))..***********************************
Read size # Mismatch Hit Count Total Norm Total M046

female body

V049

head

V056

head

..........................................................................................................AGGGGATTTTGCAACTTC........................................ 18 2 6 0.17 1 1 0 0
...............................................AGCCTCCAGTTTGCCATGC.................................................................................................. 19 3 7 0.14 1 0 1 0
..................................................................................ACTTTAGGTGTTCGTATA................................................................ 18 2 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6500:2474464-2474627 - dmo_41 confident AGA--------------TT--CACAAGATATTT-----------------TA-A--------CAAA------TGT-GAACAAAACACTCAAATGTTTAGGGGGTCAAACTGTACGTTGTATGTGTAA-ACA-ATGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGGAATCAAC--AGCA-ATT------------T--AA-------------GCATAGCTAC------TAT----A------------------------------------------TATAGT
droVir3 scaffold_12963:8856362-8856513 + dvi-mir-965 Known_mirbase CAA--------------TT--CA--TATAACATGCATCTTAAAGCTTAGTGTAGAAAAAGAAAAAA-------------ACACACACACAAATGTTTAGGGGGTCAAACTGTACGTTGTATGTGCAAAT-G-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAACGTTGATGTGACGACAAC----------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:12933969-12934108 - dgr_17 confident GA----------------------------------------------------------------------------AAATAACACTCAAATGTTTAGGGGGTCAAACTGTACGTTATATGTGTAAAT-G-AAGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGATAGCAACCTAAAA-AGTCTTGGC--------------------------ATAAGTAT------GTA----A------------------------------------------TATTAT
droWil2 scf2_1100000004577:130087-130249 - dwi_42 confident AGAA-------------TAAACAAAAGATTAT------------------GTAATAAATTAAAGAA------T-----CAATTCTACACAACA-TTTATGGGGTTAAACTGTACGTTGTATGTGCAAATCTTAAGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGTTAAATCAAC--AAT-----GTAAA------------------------------------------------------------------------------------CAATTATTTTGAT
dp5 4_group1:4362163-4362281 + dps-mir-965 Known_mirbase --------------------------------------------------------------------------------------CTCAAAAATTTGAGGGGTCAAACTGTACGTTCTATGTGACAATAT-TCGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAACTTGATGCAACAGCAAC--AAT-----CGCAA------------------------------------------------------------------------------------CAACAATTCTAGC
droPer2 scaffold_5:848159-848277 - dpe_62 confident --------------------------------------------------------------------------------------CTCAAAAATTTGAGGGGTCAAACTGTACGTTCTATGTGACAATAT-TCGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAACTTGATGCAACAGCAAC--AAT-----CGCAA------------------------------------------------------------------------------------CAACAATTCTAGC
droAna3 scaffold_12943:4147976-4148089 + dan_29 confident ----------------------------------------------------------------------------------------------TTTGGGGGGTCAAACTGTACGTTCTATGTGGCAATCT-TAGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAAAGTCAAC--AAA----TCTCAACTAAAGTG--T--------------------------------------------------------------------------------TTTAGA
droBip1 scf7180000395973:371274-371415 + --------------------------------------------------------------------------------------CTCAACCATTTGGGGGGTCAAACTGTACGTTGTATGTGCCAAACT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAAAGCCAGC--AAT----TGTCAACAACAGAGTGT--TAAAAAT----------------------ATA------------------------------------A-CTA-ATAATTAAGA
droKik1 scf7180000302401:552893-553047 - ----------------------------------------------------------------------------------------------TTTGGGGGGTCAAACTGTACGTTATATGTGCCAATCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGCAACAACAAC--GAAAAAGT------------G--TAA-TAA--TTTAAAA-------AGTTATAATAAT----------TTAATTGGTAAATCT-----------CTCAGAAAATTAGGAT
droFic1 scf7180000453904:509767-509894 - --------------------------------------------------------------------------------------CTCAACATTTTGAGGGGTGAAACTGTACGTTGTATGTGCCCTATT-ATAAAAACCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGCAACACCAAC--AAAA-AGT------------G--AC-------------CGATAAATAA------TCT----C------------------------------------------TAAAAA
droEle1 scf7180000490454:128303-128504 + AAA--------------TT--TAAATATTAGTT-----------------TT----------ACAA------CCT-GACAATATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATAAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAACAGCAAC--AAAA-A--------------------TAAA--TTGTAAG-------AGTA-----AAACAATGCGTTCTATTATAAA------AGTGCCTTAATA-CTAATTATTATTGT
droRho1 scf7180000779252:273010-273127 - AA----------------------------------------------------------------------CCT-GAGAATATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTGTATGTGTCATTCT-TTAAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAACAGCAAC--AAAA-A--------------------------------------------------------------------------------------------------------
droBia1 scf7180000301547:14070-14220 + ----------------------------------------------------------------------------------------------TTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAGAAGTTGGTGCAACAGCAAC--GAC--CGT------------G--TGATAAA--TTGTAGG-------AGTATA-----------TGTTCTTTTATGATCATTCA-----------A--CCACACATCTAGA
droTak1 scf7180000413017:293120-293289 + AC-------------------CAAATGTTACTT-----------------TT----------ACAA------TCT-GACAATATTGCTTAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAAAAGCAAC--AGAA-AGT------------A--TGATTAA--TTGTAAG-------AATA-----ATTCAAA------------------------------------------TATATT
droEug1 scf7180000409461:574422-574601 + ATA--------------TAAATAATAATTTTT------------------TT-G--------AGAA------CCT-GACAATATTGCTCAACATTTTAGGGGGTTAAACTGTACGTTATATGTGCTATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAAAGCAACAGCAGC--AAAA-AGT------------G--TTTTTAA--TTTAA-GGTCATGTAT------TAT------------------------------------------ACACTTTTAGG
dm3 chr2L:243011-243147 - dme-mir-965 Known_mirbase AA----------------------------------------------------------------------TCTGGACAATATTGCTCAACATTTTGGGGGGTAAAACTGTACGTTATATGTGCCCTTCT-GTGATATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTATTGCAAC--GAAA-AGT------------G--TTTTTCA--TTCA----------------------------------------------------------------------TAGA
droSim2 2l:229242-229405 - dsi-mir-965 Known_mirbase CA--------------------AAATATTACTT-----------------GT----------ACAA------TCTGGACAAAATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCT-GTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAAC--GAAA-AGT------------G--GTTTTCA--TTCATAG-------AGTATA-----------------------------------------------------AATGT
droSec2 scaffold_14:240961-241135 - dse_32 confident GA---------------TTC-AAAATATTACTT-----------------GT----------ACAA------TCTGGACAAAATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCT-GTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAAC--GAAA-AGT------------G--GTTTTCA--TTCACAG-------AGTATAAATGTA------------------------------------C-CCA---------TT
droYak3 2L:236047-236207 - dya_28 confident ACATTTAACTTAGCAAAATC-AAAATATTAATT-----------------GT----------ACAATCACCATCT-GACAAAATTGCTCAACATTTTAGGGGGTTAAACTGTACGTTATATGTGCCCTTTT-GT-AAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAACAGCAAC--AAAT-AGT------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:289326-289480 - der_40 confident CA--------------------AAGTATTACTT-----------------GT----------AGAA------CCT-GACAAAATTGCTCAACATTTTAGGGGGTGAAACTGTACGTTATATGTGTCCTTCT-GTAAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTACAGCAACAGCAAC--AAAA-AGT------------G--AATCTTA--TTCA--------------------------------------------------------------------TAGAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGA--------------TT--CACAAGATATTT-----------------TA-A--------CAAA------TGT-GAACAAAACACTCAAATGTTTAGGGGGTCAAACTGTACGTTGTATGTGTAA-ACA-ATGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGGAATCAAC--AGCA-ATT------------T--AA-------------GCATAGCTAC------TAT----A------------------------------------------TATAGTSizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................22161502.00615022934764311515331132112
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................21115238.001523847966248491023746
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................2212976.00297615220228191
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2312173.0021739356286115210
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................2112071.002071200120680
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2112056.0020561962200920
...................................................................................................GGGGTCAAACTGTACGTTGTATG...............................................................................................................................................................................2311483.001483165639202754686
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201961.009613017356441
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................231524.0052423917232621
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................231483.004833195121524
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................201341.00341328000130
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................201281.00281260000210
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................241173.00173823100600
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................221162.00162108300501
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................251138.0013812440181
...................................................................................................GGGGTCAAACTGTACGTTGTAT................................................................................................................................................................................22179.007954000304
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................23175.007552215150
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................19156.005612001421
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24153.005328202210
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................23150.00504700030
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................26149.00494210060
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22145.00454300020
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................19134.00343300010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA................................................................................................................................27133.00333110001
...................................................................................................GGGGTCAAACTGTACGTTGTA.................................................................................................................................................................................21132.00328200220
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................18131.00312400070
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................19130.00302600040
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................19128.00282201050
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................21128.00281900090
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...................................................................................................................................24121.00211500060
...................................................................................................GGGGTCAAACTGTACGTTGT..................................................................................................................................................................................20120.00202402120
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTA....................................................................................................................................22120.00202000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTC.....................................................................................................................................21117.00176000110
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTC....................................................................................................................................22117.00171600010
...................................................................................................GGGGTCAAACTGTACGTTGTATT...............................................................................................................................................................................23115.00150121020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................24114.0014460031
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................24112.00121200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................22112.0012701040
....................................................................................................GGGTCAAACTGTACGTTGTATG...............................................................................................................................................................................22110.0010810001
...................................................................................................GGGGTCAAACTGTACGTTGTATC...............................................................................................................................................................................23110.0010020080
..............................................................................................................................................TAAGCGTATAGCTTTTCCCA.......................................................................................................................................20110.0010800020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...................................................................................................................................24110.0010900010
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCT......................................................................................................................................2219.009500040
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTA.....................................................................................................................................2119.009900000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA...............................................................................................................................2819.009800010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2418.008800000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................2118.008000170
...............................................................................................................................................AAGCGTATAGCTTTTCCCCC......................................................................................................................................2017.007000070
..............................................................................................................................................TAAGCGTATAGCTTTTCCCT.......................................................................................................................................2017.007300040
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................2517.007601000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.....................................................................................................................................2216.006600000
...................................................................................................GGGGTCAAACTGTACGTTGTATGA..............................................................................................................................................................................2416.006060000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2316.006600000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCCC.....................................................................................................................................2216.006200040
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................2116.006600000
..........................................................................................................................TGTAA-ACA-ATGAAATCCA...........................................................................................................................................................1815.005020030
...................................................................................................GGGGTCAAACTGTACGTTGC..................................................................................................................................................................................2015.005000050
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2515.005500000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAG..................................................................................................................................2515.005500000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCTC......................................................................................................................................2115.005000050
.................................................................................................................................................GCGTATAGCTTTTCCCCTTT....................................................................................................................................2015.005400010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...................................................................................................................................2415.005110030
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTG....................................................................................................................................2215.005500000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2414.004400000
...................................................................................................GGGGTCAAACTGTACGTTGTATGC..............................................................................................................................................................................2414.004000130
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTCC....................................................................................................................................2314.004400000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...................................................................................................................................2414.004400000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCC..................................................................................................................................2514.004400000
.................................................................................................................................................GCGTATAGCTTTTCCCCT......................................................................................................................................1814.004200020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAAA..............................................................................................................................2914.004400000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTCT....................................................................................................................................2314.004300010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCC...................................................................................................................................2414.004300010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...................................................................................................................................2414.004110020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAC..................................................................................................................................2514.004000040
...................................................................................................GGGGTCAAACTGTACGTTG...................................................................................................................................................................................1914.004300010
................................................................................................................................................AGCGTATAGCTTTTCCCCC......................................................................................................................................1914.004000040
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................2313.003300000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAT..................................................................................................................................2513.003000030
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAC.................................................................................................................................2613.003100020
...................................................................................................GGGGTCAAACTGTACGTTGTATGCC.............................................................................................................................................................................2513.003100020
droVir3
CAA--------------TT--CA--TATAACATGCATCTTAAAGCTTAGTGTAGAAAAAGAAAAAA-------------ACACACACACAAATGTTTAGGGGGTCAAACTGTACGTTGTATGTGCAAAT-G-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAACGTTGATGTGACGACAAC----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................22177972.0077972023254510391552998610198835666134252265503671110670412717411201364230515523452239940332712152840228901085561650451112414125700000100001000112207295614333020323272829648302026383662111320
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................21113847.001384711749367811330920208381737317072862039026259167362671844102436666573178711851813535513025014441425132476147674219231217444141659585132341809510019318617632030
...................................................................................................GGGGTCAAACTGTACGTTGTATG...............................................................................................................................................................................2318769.008769404423259201075223500021138261061742583546634528241824232462197216168120183129991801011781528910867351974284114605404552181452121697678349710927652725352115
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2316937.006937002370106192917241098114361918498103751215112448209130323225321194952769919621365816617370000000000010000000886201417735540100201100002
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2112550.0025500024992000000000135111001113350165310020010000000000000000000003001000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2311288.001288004412031100003532019367140135126338100532319927371267250648200000000000000000000730455821110000100001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................2511177.0011770016141010000321400000000112591614118102186040971608070000000000000000000000061855253000000003043
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2411084.001084001274402020061512330122015756328441330461055791561437000000000000000000002401905931100000000021
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................2311070.0010700029319419200000111825444677851481312166888120221023020170000000000000000000111104510000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201877.00877004003128120000311173563654438227857927698251538160000000000000000000430001600001201000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................221418.004180011410000100352611040020330122612271161717017221826300000000000000000000010072010101000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................231377.003770086220500000127122423149918928211416530130824141522000000000000000000012002000000000200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................241362.003620080501100000102312712250116514112213161021691875910000000000000000000005012131500000000100001
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................201352.00352003450000000000000000000200000101200000000000000000000000000000000000010000000000
....................................................................................................GGGTCAAACTGTACGTTGTATG...............................................................................................................................................................................221282.002821230200000000011000000010002042010000000000091158611712723801318300000031252819822412341
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................261280.00280004911000100210000000001029845140000504121051000000000000000000000000691840000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................221252.00252005812500000000003411120411012116521100010001000000000000000000003100601000000000000
...................................................................................................GGGGTCAAACTGTACGTTGTA.................................................................................................................................................................................211229.002290161000000000010000000000020000000000000000226125033100203330000000335312314492600100
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................201196.001960015110100000000011010001011422013100100000000000000000000000000002300000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................211181.00181026167001000000000000002000000100110000000000000000000000000000000000000000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................221176.00176001730000000000000000100000000100100000000000000000000000000000000000000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................231147.00147009500000000000100000010010000000100000000000000000000000000000471000000000000000
...................................................................................................GGGGTCAAACTGTACGTTGTAT................................................................................................................................................................................221120.001201092201000000031242010300235310100011300000300102010000000241102531555676213021
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................191116.001160054110000001101111032022021315242002310000000000000000000000000001000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA................................................................................................................................271109.0010900270100000001000000000008120200000031441000000000000000000000100221201000000000000
...................................................................................................GGGGTCAAACTGTACGTTGTATGT..............................................................................................................................................................................241103.001030300001000000000000000010012000100000000000120001001000101100001000192057192300010
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................18186.008600672020020000000010000002010130000020001000000000000000100000000000000000010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................24176.007600131000000002002000101006457022120075601000000000000000000000022310000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................24168.00680080000000004120100110012685100210312910000000000000000000040003100000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................21159.005900131000000001110100000003040454720223200000000000000000000001000010100000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...................................................................................................................................24159.00590013110000000000000020100100131131001000100000000000000000000003061000000000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTA....................................................................................................................................22144.004400420000000000000000000000000000000010000000000000000000000000001000000000000000
...................................................................................................GGGGTCAAACTGTACGTT....................................................................................................................................................................................18140.004000700000000000000000000010020000000000000001001000000000001000000000108016200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCC..................................................................................................................................25139.003900101001000000001000000000000635301000003000000000000000000000040100000000000000
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................19137.003700330000000000000000000000000001000000000000000000000000000001001000100000000000
...................................................................................................GGGGTCAAACTGTACGTTGTATGA..............................................................................................................................................................................24137.003700000000000000000000000000000000000000000000000000000000000000000200572103610001
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................19136.003600360000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................22136.00360050000000000000010010023001213220011110000000000000100000002000010005000000000
...................................................................................................GGGGTCAAACTGTACGTTGTATC...............................................................................................................................................................................23136.00360001000000000000000000000000000000000000000321031032010000100000000023253300000
...................................................................................................GGGGTCAAACTGTACGTTGT..................................................................................................................................................................................20135.00350021002000000000000000000011000000000010000001001000000000102000100047134200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCC...................................................................................................................................24130.00300091000000000010100010010001810500000000000000000000000000000010000000000000000
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................19129.002900241000000010000000000000000000100000000000000000000000020000000000000000000000
...................................................................................................GGGGTCAAACTGTACGTTGTATT...............................................................................................................................................................................23128.002800010010000000100300013000000000000000000000001000000000100111000000011000200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTC..................................................................................................................................25127.00270001000000000013000100000001521600000004000000000000000000000010010000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................24127.0027001400000000000000000000000000000000000000000000000000000000000130000000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCT......................................................................................................................................22127.002700200000000000001001100000000000000000100000000000000000000000020000000010000000
...................................................................................................GGGGTCAAACTGTACGTTGTATA...............................................................................................................................................................................23124.00240000000000000000000000000010000000000000000100001000010000100000010071133101010
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................21123.002300110000000000000000000001000000000000010000000000000000000000001900000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................25122.00220050010000000010000001002201301100000200000000000000000000001010000000000000000
........................................................................................................CAAACTGTACGTTGTATG...............................................................................................................................................................................18121.00210300000010000000000000000000000000000010000000000000000000000000000051001900000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...................................................................................................................................24121.00210071000000000001000000000011121200000000000000000000000000000022000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA...............................................................................................................................28119.00190030000000000000000000003142000000001000000000000000000000000004100000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCA.......................................................................................................................................20118.00180040000000000000000000000020120210212100000000000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCT.......................................................................................................................................20117.00170040000000000000000000002000322300000000000000000000000000000000100000000000000
.................................................................................................................................................GCGTATAGCTTTTCCCCT......................................................................................................................................18116.001600110000000000000000000000000000000000000000000000000000220000000000010000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................24115.001500140000000000000000000000000000000000000000000000000000000000001000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTG..................................................................................................................................25115.00150030000000000000000000002020000120021000000000000000000000000001000010000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTAT....................................................................................................................................23115.00150011000000000000000000010000320600000010000000000000000000000000000000000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTC....................................................................................................................................22115.001500150000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................21114.00140420000000000001000000000000100000000000000000000001000100000000000010101100000
..............................................................................................................................................TAAGCGTATAGCTTTTCC.........................................................................................................................................18113.00130030000000000000100001003002010000010100000000000000000000000000000000000000000
................................................................................CACACACACAAATGTTTAG......................................................................................................................................................................................................19113.00130000000000000000000000001124101000000021000000000000000000000000000000000000000
...................................................................................................GGGGTCAAACTGTACGTTG...................................................................................................................................................................................19112.00120000000000000000000000000010000000000000000000000000000000000000000132130100000
......................................................................................................GTCAAACTGTACGTTGTATG...............................................................................................................................................................................20112.00121000000000000000000000000000000000000000000000000000000200000000000021005100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...................................................................................................................................24112.00120010100000001000000000002010010000001100000000000000000000001000200000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCCC..................................................................................................................................25111.00110070000000000000000100010000100100000000000000000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAG..................................................................................................................................25110.00100010000000000000000200000010000010010200000000000000000000001000100000000000000
...............................................................................ACACACACACAAATGTTTAG......................................................................................................................................................................................................20110.00100000000000000000000100000023010000000000000000000000000000000000100002000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.....................................................................................................................................22110.00100030000000000000000010000030001000001000000000000000000000001000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...................................................................................................................................24110.00100051000000000000000000000011100000000000000000000000000000000000010000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTTTC..................................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000000000090000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGT...................................................................................................................................2419.0090030000000000100000000000000010000001100000000000000000000000010010000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000080000000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTTCC..................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000080000000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTCCC..................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000080000000000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2318.0080050000000000000000000001000000000000100000000000000000000000001000000000000000
...................................................................................................................................................GTATAGCTTTTCCCCTTT....................................................................................................................................1817.0070070000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GGGGTCAAACTGTACGTTGTATGTGC............................................................................................................................................................................2617.0070020000000003000000000000000000000000000000000000000000000010000000000000000100
..................................................................................................................................................CGTATAGCTTTTCCCCT......................................................................................................................................1717.0070000000000000000000000000000000000000000000000000000000160000000000000000000000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................2317.0070020000000000000000000000000000000000100000000000000000000000004000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAT..................................................................................................................................2517.0070000000000000000000000000000100000000200000000000000000000000001300000000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTG....................................................................................................................................2216.0060050000000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTGT..................................................................................................................................2516.0060000000000001000000000000000000000010000000000000000000000000004000000000000000
..................................................................................................................................................CGTATAGCTTTTCCCCTTT....................................................................................................................................1916.0060041000100000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................2316.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000060000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCAA......................................................................................................................................2116.0060030000000000000000000000010000000000000000000000000000000000000200000000000000
.........................................................................................................................................ATTCATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000060000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAC..................................................................................................................................2516.0060010000000001000000000000010000000010010000000000000000000010000000000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000050000000000000000
..........................................................................................................................TGCAAAT-G-ATGAAATTCAA..........................................................................................................................................................1915.0050000000000000000000000000010100000100100000000000000000000000000010000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCC.......................................................................................................................................2115.0050040000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTA.....................................................................................................................................2115.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2515.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000050000000000000000
...................................................................................................GGGGTCAAACTGTACGTTGTC.................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000030002000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000050000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...................................................................................................................................2415.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTATC..................................................................................................................................2514.0040000000000000000000000000000011000000000000000000000000000000010010000000000000
droGri2
GA----------------------------------------------------------------------------AAATAACACTCAAATGTTTAGGGGGTCAAACTGTACGTTATATGTGTAAAT-G-AAGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGATAGCAACCTAAAA-AGTCTTGGC--------------------------ATAAGTAT------GTA----A------------------------------------------TATTATSizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2213566.003566353333
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................211737.007377316
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................231327.003273234
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................211273.002732730
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................20178.0078780
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................20149.0049490
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22128.0028280
...................................................................................................GGGGTCAAACTGTACGTTATATG...............................................................................................................................................................................23128.0028226
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................20115.0015150
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24115.0015150
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................19110.0010100
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................1919.00990
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2319.00990
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2319.00990
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................2317.00770
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...................................................................................................................................2417.00770
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCT......................................................................................................................................2214.00440
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2413.00330
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................1913.00330
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................1913.00330
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................2312.00220
....................................................................................................GGGTCAAACTGTACGTTATATG...............................................................................................................................................................................2212.00220
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................1812.00220
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2212.00220
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2411.00110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTG..................................................................................................................................2511.00110
...................................................................................................GGGGTCAAACTGTACGTTATA.................................................................................................................................................................................2111.00110
...................................................................................................GGGGTCAAACTGTACGTT....................................................................................................................................................................................1811.00110
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................2111.00101
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...................................................................................................................................2411.00110
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTG....................................................................................................................................2211.00110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTGG....................................................................................................................................2311.00110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................2211.00110
...................................................................................................................................................GTATAGCTTTTCCCCTTT....................................................................................................................................1811.00110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................2511.00110
...................................................................................................GGGGTCAAACTGTACGTTATAT................................................................................................................................................................................2211.00110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...................................................................................................................................2411.00110
.....................................................................................................GGTCAAACTGTACGTTATATG...............................................................................................................................................................................2111.00110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................2311.00110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................2111.00110
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTGGC..................................................................................................................................2411.00110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTCC....................................................................................................................................2311.00110
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2211.00110
droWil2
AGAA-------------TAAACAAAAGATTAT------------------GTAATAAATTAAAGAA------T-----CAATTCTACACAACA-TTTATGGGGTTAAACTGTACGTTGTATGTGCAAATCTTAAGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGTTAAATCAAC--AAT-----GTAAA------------------------------------------------------------------------------------CAATTATTTTGATSizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................22114373.001437351342576618249
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................2112197.00219745178715211139
...................................................................................................GGGGTTAAACTGTACGTTGTATG...............................................................................................................................................................................2312040.00204048127219784484
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................231724.0072406935179
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................211655.006550655000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201287.00287120923936
...................................................................................................GGGGTTAAACTGTACGTTGTAT................................................................................................................................................................................221159.001591010210433
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................231128.0012801101170
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................201111.001110109101
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................20179.0079079000
...................................................................................................GGGGTTAAACTGTACGTTGTA.................................................................................................................................................................................21167.00679513715
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24164.0064063001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................22162.0062056051
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................24155.00550380170
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................25136.0036030060
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................18131.0031029011
...................................................................................................GGGGTTAAACTGTACGTTGTATGT..............................................................................................................................................................................24130.0030131097
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22126.0026026000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................23125.0025021112
....................................................................................................GGGTTAAACTGTACGTTGTATG...............................................................................................................................................................................22125.0025021031
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................19122.0022019030
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................23120.0020020000
...................................................................................................GGGGTTAAACTGTACGTTGTATGA..............................................................................................................................................................................24119.0019200152
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................19119.0019017011
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................19118.0018018000
..........................................................................................................................TGCAAATCTTAAGAAATCCA...........................................................................................................................................................20117.0017031103
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................23112.0012012000
...................................................................................................GGGGTTAAACTGTACGTTGT..................................................................................................................................................................................20110.001001171
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................2119.00907011
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................2218.00806011
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2217.00707000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................2417.00715010
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................1916.00606000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCT......................................................................................................................................2216.00606000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2615.00503020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................2115.00532000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2214.00404000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCT.......................................................................................................................................2014.00404000
...................................................................................................GGGGTTAAACTGTACGTTGTATA...............................................................................................................................................................................2314.00400013
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCC..................................................................................................................................2514.00404000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................2114.00404000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...................................................................................................................................2414.00404000
.....................................................................................................GGTTAAACTGTACGTTGTATG...............................................................................................................................................................................2113.00303000
..................................................................................................................................................CGTATAGCTTTTCCCCTTT....................................................................................................................................1913.00302010
...................................................................................................GGGGTTAAACTGTACGTTGTATGG..............................................................................................................................................................................2413.00320001
....................................................................................................GGGTTAAACTGTACGTTGTAT................................................................................................................................................................................2113.00301020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTC..................................................................................................................................2512.00202000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................2112.00210001
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTA.....................................................................................................................................2112.00202000
...................................................................................................GGGGTTAAACTGTACGTTG...................................................................................................................................................................................1912.00210001
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTG....................................................................................................................................2212.00202000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................2312.00202000
...................................................................................................GGGGTTAAACTGTACGTTGTATT...............................................................................................................................................................................2312.00210010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA................................................................................................................................2712.00202000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................2512.00202000
...................................................................................................GGGGTTAAACTGTACGTTGTAA................................................................................................................................................................................2212.00200011
...................................................................................................GGGGTTAAACTGTACGTTGTATGAA.............................................................................................................................................................................2512.00200011
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2412.00202000
........................................................................................................TAAACTGTACGTTGTATG...............................................................................................................................................................................1812.00202000
..........................................................................................................................TGCAAATCTTAAGAAATCC............................................................................................................................................................1912.00210010
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................2412.00202000
...................................................................................................GGGGTTAAACTGTACGTTGTATC...............................................................................................................................................................................2312.00210001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...................................................................................................................................2411.00100010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTACC..................................................................................................................................2511.00100010
..........................................................................................................AACTGTACGTTGTATGTGCA...........................................................................................................................................................................2011.00100001
....................................................................................................GGGTTAAACTGTACGTTG...................................................................................................................................................................................1811.00101000
...................................................................................................................................................GTATAGCTTTTCCCCTTT....................................................................................................................................1811.00101000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCA.......................................................................................................................................2011.00101000
..............................................................................................................................................TAAGCGTATAGCTTTTCCAA.......................................................................................................................................2011.00100010
...................................................................................................................................................GTATAGCTTTTCCCCTTAA...................................................................................................................................1911.00101000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTC.....................................................................................................................................2111.00101000
...................................................................................................................................................GTATAGCTTTTCCCCTTA....................................................................................................................................1811.00101000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCCC..................................................................................................................................2511.00101000
...................................................................................................GGGGTTAAACTGTACGTTGTATGTC.............................................................................................................................................................................2511.00100001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...................................................................................................................................2411.00101000
...............................................................................AATTCTACACAACA-TTTAT......................................................................................................................................................................................................1911.00100010
..............................................................................................................................................TAAGCGTATAGCTTTTCC.........................................................................................................................................1811.00101000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCA......................................................................................................................................2011.00101000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.....................................................................................................................................2211.00101000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTC...................................................................................................................................2311.00101000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAACC.................................................................................................................................2611.00100010
...........................................................................................................................GCAAATCTTAAGAAATCCA...........................................................................................................................................................1911.00101000
.................................................................................................................................................GCGTATAGCTTTTCCCCTTT....................................................................................................................................2011.00101000
.......................................................................................................TTAAACTGTACGTTGTATG...............................................................................................................................................................................1911.00110000
...............................................................................................................................................AAGCGTATAGCTTTTCCC........................................................................................................................................1811.00101000
....................................................................................................GGGTTAAACTGTACGTTGTATGAA.............................................................................................................................................................................2411.00100010
dp5
--------------------------------------------------------------------------------------CTCAAAAATTTGAGGGGTCAAACTGTACGTTCTATGTGACAATAT-TCGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAACTTGATGCAACAGCAAC--AAT-----CGCAA------------------------------------------------------------------------------------CAACAATTCTAGCSizeHit CountTotal NormTotalM022

Male-body
M040

Female-body
M059

Embryo
M062

Head
V043

Embryo
V051

Head
V112

Male-body
SRR902010

Ovary
SRR902011

Testis
SRR902012

CNS imaginal disc
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................22121772.0021772019177140246637920162313321
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................2116399.006399045811206504612220140
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2311334.0013340117372432787040
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2111208.00120801189210131200
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201844.0084406749172240010
...................................................................................................GGGGTCAAACTGTACGTTCTATG...............................................................................................................................................................................231798.00798042463687413930162
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................211473.0047300348125000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................221291.0029102021556000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................201234.00234022833000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................231186.0018601422051510300
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................221146.00146014112101000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................241125.00125012101210000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................24189.008908031500000
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................20166.006606310000020
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22160.006006000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................21150.005004401100400
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................25149.004904800100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................23147.0047027127010000
...................................................................................................GGGGTCAAACTGTACGTTCTA.................................................................................................................................................................................21146.0046013611005119
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................19142.004204101000000
....................................................................................................GGGTCAAACTGTACGTTCTATG...............................................................................................................................................................................22137.003703700000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................19132.003202263000001
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................23132.003203011000000
...................................................................................................GGGGTCAAACTGTACGTTCTAT................................................................................................................................................................................22126.002601240201034
..............................................................................................................................................TAAGCGTATAGCTTTTCCCA.......................................................................................................................................20118.001801800000000
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................18117.001701600000001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................23115.001501320000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCT.......................................................................................................................................20114.00140923000000
...................................................................................................GGGGTCAAACTGTACGTTCT..................................................................................................................................................................................20113.00130520000024
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................25112.001201000100010
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................19110.001001000000000
..........................................................................................................................TGACAATAT-TCGAAATTCA...........................................................................................................................................................19110.00100400510000
...................................................................................................GGGGTCAAACTGTACGTTCTATGA..............................................................................................................................................................................2419.0090100100016
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2218.0080800000000
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................1917.0070601000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTCT....................................................................................................................................2316.0060510000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...................................................................................................................................2416.0060402000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTA.....................................................................................................................................2116.0060600000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCC...................................................................................................................................2415.0050104000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................2115.0050032000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCT......................................................................................................................................2215.0050500000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2415.0050500000000
...................................................................................................GGGGTCAAACTGTACGTTCTATGT..............................................................................................................................................................................2414.0040010101001
...................................................................................................GGGGTCAAACTGTACGTTC...................................................................................................................................................................................1914.0041010000002
...................................................................................................GGGGTCAAACTGTACGTTCTATGTGA............................................................................................................................................................................2614.0040100000030
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTC.....................................................................................................................................2113.0030210000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCC.......................................................................................................................................2113.0030210000000
...................................................................................................GGGGTCAAACTGTACGTTCTATT...............................................................................................................................................................................2313.0030000200001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCAA......................................................................................................................................2113.0030300000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2613.0030300000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................2313.0030300000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.....................................................................................................................................2213.0030300000000
.................................................................................................................................................GCGTATAGCTTTTCCCCT......................................................................................................................................1813.0030201000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCCC..................................................................................................................................2513.0030002010000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................2113.0030210000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2213.0030300000000
...................................................................................................GGGGTCAAACTGTACGTTCTAC................................................................................................................................................................................2212.0020020000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2312.0020200000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAC..................................................................................................................................2512.0020110000000
...................................................................................................................................................GTATAGCTTTTCCCCTTT....................................................................................................................................1812.0020200000000
...................................................................................................GGGGTCAAACTGTACGTTCTATC...............................................................................................................................................................................2312.0020010100000
...................................................................................................GGGGTCAAACTGTACGTTCTATGTGAC...........................................................................................................................................................................2712.0020200000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCC......................................................................................................................................2012.0020002000000
.................................................................................................................................................GCGTATAGCTTTTCCCCTTT....................................................................................................................................2012.0020200000000
................................................................................................................................................AGCGTATAGCTTTTCCCC.......................................................................................................................................1812.0020200000000
..................................................................................................AGGGGTCAAACTGTACGTTCTATG...............................................................................................................................................................................2412.0020100100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCAC.....................................................................................................................................2212.0020110000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...................................................................................................................................2412.0020200000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCAC......................................................................................................................................2112.0020020000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTAC....................................................................................................................................2312.0020200000000
.....................................................................................................GGTCAAACTGTACGTTCTATG...............................................................................................................................................................................2112.0020200000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA................................................................................................................................2712.0020200000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2411.0010100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTGC....................................................................................................................................2311.0010100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTG..................................................................................................................................2511.0010100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTGG....................................................................................................................................2311.0010100000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTC....................................................................................................................................2211.0010100000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2511.0010100000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2111.0010001000000
......................................................................................................GTCAAACTGTACGTTCTATG...............................................................................................................................................................................2011.0010100000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................2411.0010100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAC.................................................................................................................................2611.0010010000000
..................................................................................................................................................CGTATAGCTTTTCCCCTTT....................................................................................................................................1911.0010100000000
.......................................................................................................................................AAATTCATAAGCGTATAGC...............................................................................................................................................1911.0010100000000
droPer2
--------------------------------------------------------------------------------------CTCAAAAATTTGAGGGGTCAAACTGTACGTTCTATGTGACAATAT-TCGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAACTTGATGCAACAGCAAC--AAT-----CGCAA------------------------------------------------------------------------------------CAACAATTCTAGCSizeHit CountTotal NormTotalM021

Embryo
M042

Female-body
V042

Embryo
V050

Head
V057

Head
V111

Male-body
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2214561.0045610382119212339728
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................211729.0072956153186010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................231264.002640212915262
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................211190.0019001900000
...................................................................................................GGGGTCAAACTGTACGTTCTATG...............................................................................................................................................................................231158.00158515334668
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................20163.00630580230
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................23148.00480424020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................22138.00380380000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................24130.00300281010
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................20129.00290280100
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24117.00170150101
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................22114.00140140000
...................................................................................................GGGGTCAAACTGTACGTTCTA.................................................................................................................................................................................21114.00141220000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22113.00130130000
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................20110.00100100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................2217.007050011
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................2317.007050110
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2317.007070000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................2516.006060000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................2116.006060000
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................1916.006060000
..........................................................................................................................TGACAATAT-TCGAAATTCA...........................................................................................................................................................1916.006023010
...................................................................................................GGGGTCAAACTGTACGTTCTATGA..............................................................................................................................................................................2415.005320000
...................................................................................................GGGGTCAAACTGTACGTTCT..................................................................................................................................................................................2015.005410000
....................................................................................................GGGTCAAACTGTACGTTCTATG...............................................................................................................................................................................2215.005050000
...................................................................................................GGGGTCAAACTGTACGTTCTAT................................................................................................................................................................................2214.004130000
...................................................................................................GGGGTCAAACTGTACGTTC...................................................................................................................................................................................1914.004400000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTA.....................................................................................................................................2113.003030000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................2313.003010110
................................................................................................................................TAT-TCGAAATTCATAAGCGTATAGC...............................................................................................................................................2512.002000002
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................2312.002020000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCA.......................................................................................................................................2012.002020000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2612.002020000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCT......................................................................................................................................2212.002020000
.................................................................................................................................................GCGTATAGCTTTTCCCCT......................................................................................................................................1812.002200000
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................1812.002020000
..................................................................................................................................................CGTATAGCTTTTCCCCTTT....................................................................................................................................1911.001001000
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................1911.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCT........................................................................................................................................1911.001000010
.....................................................................................................GGTCAAACTGTACGTTCTATG...............................................................................................................................................................................2111.001010000
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................1911.001010000
...................................................................................................GGGGTCAAACTGTACGTTCTATGT..............................................................................................................................................................................2411.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCAC.....................................................................................................................................2211.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2411.001010000
...................................................................................................GGGGTCAAACTGTACGTTCC..................................................................................................................................................................................2011.001100000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2411.001010000
....................................................................................................GGGTCAAACTGTACGTTCTAT................................................................................................................................................................................2111.001010000
....................................................................................................GGGTCAAACTGTACGTTCT..................................................................................................................................................................................1911.001100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................2111.001000010
...................................................................................................GGGGTCAAACTGTACGTTCTATGTGAC...........................................................................................................................................................................2711.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCT..................................................................................................................................2511.001001000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.....................................................................................................................................2211.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................2411.001010000
...................................................................................................GGGGTCAAACTGTACGTTCTATT...............................................................................................................................................................................2311.001000100
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTAC....................................................................................................................................2311.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTCC....................................................................................................................................2311.001010000
...................................................................................................GGGGTCAAACTGTACGTTCTATGTG.............................................................................................................................................................................2511.001100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................1911.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTAT....................................................................................................................................2311.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTCT....................................................................................................................................2311.001000010
droAna3
----------------------------------------------------------------------------------------------TTTGGGGGGTCAAACTGTACGTTCTATGTGGCAATCT-TAGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAAAGTCAAC--AAA----TCTCAACTAAAGTG--T--------------------------------------------------------------------------------TTTAGASizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2216151.0061513082228419735176161
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................2116036.0060363925348638130122
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................2111495.001495014940001
...................................................................................................GGGGTCAAACTGTACGTTCTATG...............................................................................................................................................................................2311065.0010653871616113632
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201901.0090122844513017
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................231503.0050331710511391516
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................221286.0028612840100
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................211189.00189172130121
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................191112.0011221070120
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................23197.0097166310602
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24164.00645120821
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................22139.003911235000
....................................................................................................GGGTCAAACTGTACGTTCTATG...............................................................................................................................................................................22135.00353500000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................24133.00335226000
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................20133.00333120000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................23130.003011170101
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................20128.002817100010
...................................................................................................GGGGTCAAACTGTACGTTCTAT................................................................................................................................................................................22121.00211510005
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................23120.0020531416
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................21118.00182120004
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................25116.00161400110
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22113.00131000201
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................21113.00130120010
...................................................................................................GGGGTCAAACTGTACGTTCTATGT..............................................................................................................................................................................24111.0011301007
..........................................................................................................................TGGCAATCT-TAGAAATTCA...........................................................................................................................................................1919.009213003
...................................................................................................GGGGTCAAACTGTACGTTCTATT...............................................................................................................................................................................2319.009003006
...................................................................................................GGGGTCAAACTGTACGTTCTA.................................................................................................................................................................................2119.009531000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCTC......................................................................................................................................2118.008080000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2218.008501200
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................2518.008142010
.....................................................................................................GGTCAAACTGTACGTTCTATG...............................................................................................................................................................................2116.006600000
..............................................................................................................................................TAAGCGTATAGCTTTTCC.........................................................................................................................................1816.006150000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...................................................................................................................................2416.006510000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................2115.005500000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................2415.005300110
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................1914.004310000
...................................................................................................GGGGTCAAACTGTACGTTCT..................................................................................................................................................................................2014.004301000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCT.......................................................................................................................................2014.004040000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...................................................................................................................................2414.004120100
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................1914.004130000
...................................................................................................GGGGTCAAACTGTACGTTCTATGTG.............................................................................................................................................................................2513.003001002
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2213.003210000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTACC..................................................................................................................................2512.002000020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2412.002200000
...................................................................................................GGGGTCAAACTGTACGTT....................................................................................................................................................................................1812.002200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...................................................................................................................................2412.002200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...................................................................................................................................2412.002010100
...................................................................................................GGGGTCAAACTGTACGTTCTATGA..............................................................................................................................................................................2412.002200000
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................1812.002200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2612.002020000
..........................................................................................................................TGGCAATCT-TAGAAATTC............................................................................................................................................................1811.001000001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTGTT...................................................................................................................................2411.001100000
...................................................................................................GGGGTCAAACTGTACGTTCTATGAA.............................................................................................................................................................................2511.001000001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCCA.....................................................................................................................................2211.001100000
...................................................................................................GGGGTCAAACTGTACGTTC...................................................................................................................................................................................1911.001100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCTG......................................................................................................................................2111.001010000
..................................................................................................................................................CGTATAGCTTTTCCCCTTT....................................................................................................................................1911.001000001
...............................................................................................................................................AAGCGTATAGCTTTTCCCCC......................................................................................................................................2011.001010000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTG..................................................................................................................................2511.001100000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTC....................................................................................................................................2211.001100000
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................1911.001010000
droBip1
--------------------------------------------------------------------------------------CTCAACCATTTGGGGGGTCAAACTGTACGTTGTATGTGCCAAACT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAAAGCCAGC--AAT----TGTCAACAACAGAGTGT--TAAAAAT----------------------ATA------------------------------------A-CTA-ATAATTAAGASizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------------------------------------------------------TTTGGGGGGTCAAACTGTACGTTATATGTGCCAATCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGCAACAACAAC--GAAAAAGT------------G--TAA-TAA--TTTAAAA-------AGTTATAATAAT----------TTAATTGGTAAATCT-----------CTCAGAAAATTAGGATSizeHit CountTotal NormTotal
No Reads
droFic1
--------------------------------------------------------------------------------------CTCAACATTTTGAGGGGTGAAACTGTACGTTGTATGTGCCCTATT-ATAAAAACCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGCAACACCAAC--AAAA-AGT------------G--AC-------------CGATAAATAA------TCT----C------------------------------------------TAAAAASizeHit CountTotal NormTotal
No Reads
droEle1
AAA--------------TT--TAAATATTAGTT-----------------TT----------ACAA------CCT-GACAATATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATAAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAACAGCAAC--AAAA-A--------------------TAAA--TTGTAAG-------AGTA-----AAACAATGCGTTCTATTATAAA------AGTGCCTTAATA-CTAATTATTATTGTSizeHit CountTotal NormTotal
No Reads
droRho1
AA----------------------------------------------------------------------CCT-GAGAATATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTGTATGTGTCATTCT-TTAAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAACAGCAAC--AAAA-A--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
----------------------------------------------------------------------------------------------TTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAGAAGTTGGTGCAACAGCAAC--GAC--CGT------------G--TGATAAA--TTGTAGG-------AGTATA-----------TGTTCTTTTATGATCATTCA-----------A--CCACACATCTAGASizeHit CountTotal NormTotal
No Reads
droTak1
AC-------------------CAAATGTTACTT-----------------TT----------ACAA------TCT-GACAATATTGCTTAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAAAAGCAAC--AGAA-AGT------------A--TGATTAA--TTGTAAG-------AATA-----ATTCAAA------------------------------------------TATATTSizeHit CountTotal NormTotal
No Reads
droEug1
ATA--------------TAAATAATAATTTTT------------------TT-G--------AGAA------CCT-GACAATATTGCTCAACATTTTAGGGGGTTAAACTGTACGTTATATGTGCTATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAAAGCAACAGCAGC--AAAA-AGT------------G--TTTTTAA--TTTAA-GGTCATGTAT------TAT------------------------------------------ACACTTTTAGGSizeHit CountTotal NormTotal
No Reads
dm3
AA----------------------------------------------------------------------TCTGGACAATATTGCTCAACATTTTGGGGGGTAAAACTGTACGTTATATGTGCCCTTCT-GTGATATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTATTGCAAC--GAAA-AGT------------G--TTTTTCA--TTCA----------------------------------------------------------------------TAGASizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................221132319.001323190000167216338512211100000123133894078784247680798545216397179219356198260489183296271121213307445440262179000901000000000000000000549555504412407559192942835207134442122231009821121282128146717530361129105376312361468222181398921043117122217122361682123441302107268160962200001216320625556681410034817515715835889193177134121004253112623240125634282867021392010514890517254612061028681060953551611190140192116133000690214500000123127000080409312203157816425710243151584413053773444425942876131224610000137123372513448931149532816444555772406691642412227347564563218654213166241351178187223627505005568216320341386659153812432111407591277721708076654271795306597851397301130102992792253177603569351392625510581439153134405568290311181436454131310716813852668363102103380499441115
...................................................................................................GGGGTAAAACTGTACGTTATATG...............................................................................................................................................................................23130100.003010000001231711124190000104172001382133727139915617418151581375122313166000000000000000000000002128211433308630317110694561989917111910025223242511164171201367192513514146281768935114171016341363533154510000102101052012065311261362015172720101240171817997116010517844843883271475417716307370931581312120103040200811000200713711308211101565490106014191471478147287728812132701000127154206715021771212243148562971331081155799628613810287256370125204109454857250109811370611366078767520412178829612337340291792812446046137215071926803194762651861300127196151167110677127731622016811711105139662424412433340
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................21120267.002026700001202320201000000911125002920590127101254927224112277321303210243061702320000001000000000000000006156214673896191039151255562327112341918018146041691713702103748491132714114820030615016413186850000000000283616101113302518986625191500100183143109513199480427023612811426941156119514046167301982919321000080690000051200005032523311816510711019725152713016011220128040251000091593768128160514965711036129271662426767834477340476218369434831058319337021811926198166532163161302929268512196412822277212016712603859213101678709548313616614221181333142430264431189111413412732193180
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2316305.006305000000003000000000003519100200000001410225481058328881143000000000000000000000002832752341982303382203800551556200031458178811731532929333112293241301010140423492300000000002221603562418352400000251104135692720850020430351392561074105455650005020000001020000062261828915438423152182219342710218000002013826113591759644671058454875302859325412151422151581014458565543372727223551839114322259233177922162544320131274021430515121201512155434751615392
...................................................................................................GGGGTAAAACTGTACGTTATAT................................................................................................................................................................................2213327.0033270000000000000000000003100010005140011000020001200310010000000000000000000000031212231037435175330020031110143190193431100005006331205004805311500000010100000000000000000000020000011170130110170511684080100018012000030000020010000000715164123188123819623780232228130021550000100605101131000112110233533652714302643330168521749244284533517200210313162380152020910414441215222920201000035236200
...................................................................................................GGGGTAAAACTGTACGTTATA.................................................................................................................................................................................2112733.00273300000000001000000000001000014018022000100000010010002000000000000000000000003742302210022314100100030010024019818000000000212001100110002221000000030001000000000000000115010100513062121121411513600160500000000000400000000000050357131179195164512658706534670000010501028363210041018851513491189383318149421261135369600515626110241501248031814129011944348799441412741915261010102241002171421762370
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................2011820.0018200000000000000000000041100012201217007929811733281419410102435000000000000000000000001131281017210070000001010102000140722311001200501220000000324221802300000026023011211405000000040501183837021023180132412006232017725300010100000011000000259813535313383421240012000010535222142712485182232391350221502123072825112401242150294102812102483001253800110131511010010021001005302342332060
..................................................................................................GGGGGTAAAACTGTACGTTATATG...............................................................................................................................................................................2411688.00168800004005000001000000100000022312100000000100010100220000000000000000000000000000011100021000000340102300310104000000010120000010130100000000000020003010105540000000010021013212312355400000210240000010000001200000014111061249232864502845277321300000104067612120446552044332107262314723530016166716718914241211457593141221247416045011338554143221219729143897100384330411111438180
..........................................................................................................................TGCCCTTCT-GTGATATTCA...........................................................................................................................................................1911353.001353000000000000000000000000000228000000220000010020110010000000000000000000000006541233127820163960111017311210108981142848325827428110010100000001000000000001100038350010000000041317020010020208373420417030006000000000010000000000100000000007540219328616014684133000011001000000000541971101101001710000000000003100201780000000000000205000000000000000100000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2311207.00120700001000100301000000002000000012110001255323101084210612000000000000000000000002924141018063342000004422003741713398400910117011100055100191278000000000001104111222040000000121000047420280091101202301812000001923810000110000002200000020013100110152527155151820112125000116315611141651117572110442101611222205110014130371688169402007911002020621810000201111001331030011350
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................191870.0087000000000000000000000000000091994447102001011001110000000000000000000000000000111107765500000010000010000000001553200010020092300000016180259224500000500000010000002000000070000117045101494214011007106001000000000000000000000000422100110000200200000010010100100100200101101105041202000100021300303400000100100000000001000000000001000000004000
...................................................................................................GGGGTAAAACTGTACGTTAT..................................................................................................................................................................................201818.00818000000000000000000000200000000000027000000000010000000000000000000000000000001619131606009017101101100000300161125505010020017030100020310100000000000000000000000000113031000250100051002070000005000000000000000000000000850110023111625309181812009000000000329110000211002412593101262917632105092823210611008010430132211004261055041201723010000000473220
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................211779.007790000001000000000000010200000000000010000201011001210100000000000000000000000161210160100207600000000000000014111522220000200640003000203400000000000100200101000000000010140228734604010111201203002700360018000100000000000000000000030050143410202134140000011006316322513117210685101106311658118020215910128012301002116110000167000100000001000001001010320
...................................................................................................GGGGTAAAACTGTACGTTATATGT..............................................................................................................................................................................241328.00328000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000802000000000000000000001000000000000000010000000000000000000000000000000042002000000000000000000000000000200000018859143811100001000000011320000201100221111101021201001001011212100010010100301110003701262652312426010010004231247130
...................................................................................................GGGGTAAAACTGTACGTTATATT...............................................................................................................................................................................231314.003140000000000000000000000000010000000000000121000000020000000000000000000000000100001529120401090000000000000251000000011040010120101200000000000010003000100010000010200002000001001102000000200000000000000000000000012000101030000090050000000140410742000323213009018511103423580010000010202100003000001000230001000300000200000000000010000
...................................................................................................GGGGTAAAACTGTACGTTA...................................................................................................................................................................................191312.0031200000000000000000000100000000000000000000000000000000000000000000000000000004724020000200000000000010000010000000000010000000000200000000000000000000000000000202000000402010110012310003000000000000000000000000000020000911331637115000010000306100002230115310810113503821207011271232320011000100150111100486141002814021100000001142960
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................221304.003040000200120010300000000117000000000000120001400011111000000000000000000000000042420410101020010900700130000401008300302200020003053000000000023000001000010000000012000093050014020101000050089013000030100000001000000000111103251211100000000103002211903011000201100201020001140008120200102631000101100000000400000000000000000000000000
..................................................................................................GGGGGTAAAACTGTACGTTATA.................................................................................................................................................................................221281.00281000000000000000000000000001000000010000000000000000010000000000000000000000011220000000000000000000000030000000000000000010000001000000000000050001000100000000000100000010100000200000000001000000000000000000000111101200203252236012000000000022100002220102011600101600000300250752178210010107023000700510130066021033211200220000061230
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................221262.002620000001001000000000010100000000000000000000020102000200000000000000000000000851521001010500400100000102221200000000030010010071500000000000100001000000000000000000817708000102030200010023000000000000000000000000200310001100012400100000001152521200202000313202636053111030001000454521232100002110000110210000110000000000000010210
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................241260.002600000000010010000000000000000000000010213221001112311100000000000000000000000251209142051000001313100000035704401200500100000000001000000000011204100000003200000000000610400020007030000003326100000100000050000000000111023445012100200000012100123103001100010000003013000030011011230021416000023300000001600000001000000000010000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................231252.00252000000000000000000000000000000000000101210301001102100000000000000000000000099102000010200000020100000000461000000110420000000107000000000000007000000100000000000006021010002000000000000220010000001000000000000000237001525125150110100101215311511043051000101001030122251000001110240322000000002201010022300100100000000000011000110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................241252.00252000000000000000000000000000000000000001000001010000000000000000000000000000012116150010000200000011000000041113100000300000000000102100000000000000001000000000000000020011000020000204000000010100000000000001100000020005001101010070014000000002183662703535010700110207030223000000000610521430000220000000001100200000000000000000102002
...................................................................................................GGGGTAAAACTGTACGTTATATGA..............................................................................................................................................................................241246.002460000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000100000000240000000000000000010000000000010000000000000000000000000000001102000101030200000000000000000000000000000000002100148913781741100106100000000411000010120001021001100110100011601000110000200000130202001801142100020115000100000721350
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTATC..................................................................................................................................251234.002340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCC.........................................................................................................................................181217.0021700000000000000000000000000011001000000000000000000000000000000000000000000003746313400000140000010000100000117820600000000000000000103000100000000000000000000000000000000120201010010000005001011000000000000000000000000010000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................231181.0018100000000000000000000000000100000000120000011010001200000000000000000000000002710610000000000100000000000112000000000000000000021300000000000000000100030002000000000003100004200030000000016202000000100000000000000000120002121011400000000000310234402000000211000110010100020200050210253840000002101000002000000200100000510010000110
...................................................................................................GGGGTAAAACTGTACGTT....................................................................................................................................................................................181175.001750000000000000000000000000000312000000000000100000000000000000000000000000000101100000001000000010000000037300000000010000000006010032100002000000000000000002101000000300000012400100000000000000000001300000000007200000603412102003000000100000000000022002210110001210174031300021203110100000510311040022101000000000000000000124100
..........................................................................................................................TGCCCTTCT-GTGATATTCAA..........................................................................................................................................................201175.00175000000100000000000000000000000000000000000000100011000000000000000000000000000100505150000010000000000010000000100100000000000000000000000000002120010010000000000000000000000010000000001000000000000000000000000000000027143121161833000010000000000000000000000000000000000000000202000000000001000000000000000002000000000000000000000000
..................................................................................................GGGGGTAAAACTGTACGTTATAT................................................................................................................................................................................231161.001610000000000000000000000000010000000000000000000000000100000000000000000000000130104003000000000000000000410000000000001000000000010000000000000000000000000000000000000101000001000300000010000000000000000000000000000000957117276300800000000010000000000000003011003012110050015550201001004200200000020004100110040400100000000011010
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................201149.00149000001000000000000000000000000000000000100000000110000000000000000000000000034131000301121020000120010100151511000001100000000300010000000000000000000000100000000004000740200010002000000001000000000020000000000000000101110220000000000001001011100101102000100002001020022040001110100102100000000000000010000200000000000020000010010
..........................................................................................................................TGCCCTTCT-GTGATATTC............................................................................................................................................................181116.001160000000000000000000000000000000000000000000100000000000000000000000000000000242008152610000000110100030166213014002010000000000000000000000000000001000000000000000000000000101011060000000000000000000000000000000004000101000005014000000000000000000100110000000001001020000000000201000012000000100000010000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................221111.001110000020000000000000000010000000000001000000000000000100000000000000000000000431500000000400000000001000000100001000000000110000000000000000100000000010000000000000004102000000017090000006000000000000000010000000000110000100100100100000000010412101000001001000101011010000000000111433400000000000000000100000000000000000000000010
...................................................................................................GGGGTAAAACTGTACGTTATATA...............................................................................................................................................................................231106.00106000000120100000000000000010000000000100000100000000000000000000000000000000010000100001000110001000000000400000000100000000100000000000000000000010000000000000000000000010020002010000000000000000000000001000000000000013313113315200100000000000100000101000010010000100000010003030002000001000100000000011100100000300000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................25185.0085000000000000000000000110000000000000010202000000001000000000000000000000000011200300030000000001100000000031000000100000000000000000000000004201003000200000000000000020100000000000000000200100000000000020000000000100001315313000000000000000000000000000000000000000000050004010000000001000010201000000410000000000000002000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................20172.0072000000000000010000000100000000000000000000000000000000000000000000000000000011010000000000000000000000005620000000002000000000000000000000000000000000000000000000010850400020302020020102000000000000000000000000000000001000001100000000010100000000010000000000000000010010011021000001200000000000000011000000000010000000000001000
...................................................................................................GGGGTAAAACTGTACGTTATAA................................................................................................................................................................................22161.00610000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000001100001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020413013400200000000000000000000000020001000010000000001010002000000000311000020001200000030100000000000010110
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................18160.0060000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010400000000000003000000010600000000000000000000000000000000000000000000000000110000100000000003101230000000000000000000000001000000000000000000000000000000000000020000000000010010130001100810001111200300100000000000100000000000000000000000
....................................................................................................GGGTAAAACTGTACGTTATATG...............................................................................................................................................................................22160.0060000000000000100000100000000000000000000000000000000000000000000000000000000000000000002101000000000000001000000000000000000100000000000000000000000000000000000000000100010030100100015000000000000000000000000000000000062171060100100000000000000000000010000000100030011000000000000000002000000100010000100000100010000000000000000
..................................................................................................GGGGGTAAAACTGTACGTTAT..................................................................................................................................................................................21158.0058000000000000000000000000000000000030000000000000000000000000000000000000000012000000000000000010000010010000000000000000000000000000000000000000000000000000000000000000000111000200000002000000000000000000000000001020012002000200100000000000000000000000000010000210021000001010002000000000110100020001610110120200000000000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................23155.0055000001000000000000000000000000000000000000000000000000000000000000000000000011010307900100000010000022083000000200000000000000000000000000000000000000000000000000100110000000100000000000000000000000000000000000000000001100000000000000000010000000001000001000000001001000000000000000010000000100000000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................24146.0046000000000000000000000000000000000000000000001001000000000000000000000000000024120000000000000000000000000200000000000000000101000000000000000000000000000000000000000100000000000010000000205000000200000010000000000010000100001100211000000001000202000001000000000000000010000000000000000000010200000000000000000000000100000000000
...................................................................................................GGGGTAAAACTGTACGTTATATC...............................................................................................................................................................................23146.0046000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000010011000000000000000000000000000000000000010210023000031000000000001000000120100000000001000000001000100110011000002000010000000200000100000000000022110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................21139.0039000000000000010000000010000000000000000000000000100000000000000000000000000012111000100010000000000000010100000000000000000001000000000000000000000000000300000000100200000010000000000001000000000000000000000000100000000000001000000000000000100001000000100000110010000010110000000010100000001000010000000000010000000000000001000
..................................................................................................GGGGGTAAAACTGTACGTTA...................................................................................................................................................................................20136.0036000000000000000000000000000010000050000000000000000000000000000000000000000001010000000000000000000000000300000000000000000000000000000000000000000000000000000000000010010000010000000000000000000000000000000000200000010000000100000000000010000000000000000100000001010020100000101110000000300001000000000100100001000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................21131.0031000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000001100000000000000000001000000000000000000000000000000000000000210000100002020000001000000000000000000000000000000000000001000000000000010200000001000000000000010000000000000210400200000000000000010000000000000000000000001000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22130.0030000000000000000000000000000000000000000000000001000000000000000000000000000010000300001000000000000000000200000000000000000101000000000000000000000000000000000000000010200000100000000000000000000000000000000000001010000000000000000000000010010000001000200000000210020010000000000000000000000000000001000000000000000000000001010
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................19129.0029000000000000000000000000000000000000100000100000000000000000000000000000000001000000400000300000000000001500000100001000000000000000000000000000000000000000000000000200200000000000000000000000000000000000000000000000000010000000000000000001100000000000100000000000010000000001000010000000000000000000000000000000000000000000000
...................................................................................................GGGGTAAAACTGTACGTTATATGAA.............................................................................................................................................................................25128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000011020120100100000000000000000100000000000000001000000001000000000000000000200000010000100000600000000000021100
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................21127.0027000000010000000000000000000000000000100000000100000300000000000000000000000000000000000000000000000000000200000000000000010000000000000000000000000000000000000100000210000000002000000000000000000100000000000000000100000000000000000000000000100000000000000000000000000010000001000001000000000000000000000110000000000200010000100
................................................................................ATATTGCTCAACATTTTGG......................................................................................................................................................................................................19123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000020203112200200000000000010000100000000000000001000000000000000000000000001000000010100000000000000000000001000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCT.......................................................................................................................................20121.0021000010100000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000100000001000000001010000000000000000000000000000000000000000000020101000000000000000000000000000000000000000000010000000200000000000000000100000100000000010100000000000000000100000000000000000000000000000000000000000001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................26120.0020000000000000000000000000000000000000000003000100000000000000000000000000000000000000000000000000000020000001000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000110100000000000000000001100000000100000000100000002000000000
......................................................................................................GTAAAACTGTACGTTATATG...............................................................................................................................................................................20119.0019000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000011000000000000000000000000000000000000000000000010000000200000000010001000000000000000000000000000000000000000000010102000000000001000000000000000002000000100000000000000000
..................................................................................................GGGGGTAAAACTGTACGTTATATT...............................................................................................................................................................................24119.0019000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000001002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010200001100010002000000001000000000000010000000000001010010000000000000000000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................25119.0019000000000000000000000000000000000000000100100000000000000000000000000000000000100000000000000000000000002000001000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020020001000000000000011000110000000000010000000000000000000000000000000000000010000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...................................................................................................................................24119.0019000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000010000110100100011000000010000100000000100000000020000000000000000001000000000000000000000000000000000000000000000
droSim2
CA--------------------AAATATTACTT-----------------GT----------ACAA------TCTGGACAAAATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCT-GTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAAC--GAAA-AGT------------G--GTTTTCA--TTCATAG-------AGTATA-----------------------------------------------------AATGTSizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2213563.0035631174724561067410410843721642632753001
...................................................................................................GGGGTGAAACTGTACGTTATATG...............................................................................................................................................................................2311610.0016102534626631615201110374364107116000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................211672.00672181322427517158192619312500000
...................................................................................................GGGGTGAAACTGTACGTTATAT................................................................................................................................................................................221283.0028363711181758425183716000
..........................................................................................................................TGCCCTTCT-GTGAAATTCAA..........................................................................................................................................................201153.00153000100332353421000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................211137.001370001321100011100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................231112.001120108500200211317000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201107.00107650242925115010001000
...................................................................................................GGGGTGAAACTGTACGTTATA.................................................................................................................................................................................21196.009610211164121210515125000
..............................................................................................................................................TAAGCGTATAGCTTTT...........................................................................................................................................16190.0090000000000090000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................23152.00520001340631062611000
..............................................................................................................................................TAAGCGTATAGCTTT............................................................................................................................................15145.0045000000000045000000
..........................................................................................................................TGCCCTTCT-GTGAAATTCA...........................................................................................................................................................19144.0044406051526310200000
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................20140.0040000370100011000000
..........................................................................................................................TGCCCTTCT-GTGAAATTC............................................................................................................................................................18130.003090500230830000000
...................................................................................................GGGGTGAAACTGTACGTTAT..................................................................................................................................................................................20128.002800102395005111000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................25124.0024000600007110000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................21124.0024222000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................24123.002300023010582200000
........................................................................................................GAAACTGTACGTTATATG...............................................................................................................................................................................18123.0023421000000007000000
...................................................................................................................................................GTATAGCTTTTCCCCTT.....................................................................................................................................17122.0022000000001120000000
...................................................................................................GGGGTGAAACTGTACGTTATATGA..............................................................................................................................................................................24118.001810100071111302000
...................................................................................................GGGGTGAAACTGTACGTT....................................................................................................................................................................................18118.001820012401008000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................19116.001600034310302000000
......................................................................................................GTGAAACTGTACGTTATATG...............................................................................................................................................................................20115.0015010000000014000000
....................................................................................................GGGTGAAACTGTACGTTATATG...............................................................................................................................................................................22113.001300620101001011000
...................................................................................................GGGGTGAAACTGTACGTTA...................................................................................................................................................................................19113.001300102411002200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24113.001300090000000004000
..........................................................................................................................TGCCCTTCT-GTGAAATT.............................................................................................................................................................17112.001200000017040000000
..............................................................................................................................................TAAGCGTATAGCTTTTCC.........................................................................................................................................18112.001200006400002000000
...................................................................................................GGGGTGAAACTGTACGTTATATT...............................................................................................................................................................................23111.001100100010001800000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................26110.001000020000340100000
..................................................................................................GGGGGTGAAACTGTACGTTATATG...............................................................................................................................................................................24110.001010410000001210000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................2219.00900040000230000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................2019.00900090000000000000
...................................................................................................GGGGTGAAACTGTACGTTATATGAA.............................................................................................................................................................................2518.00800000044000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................2118.00841030000000000000
.......................................................................................................TGAAACTGTACGTTATATG...............................................................................................................................................................................1917.00721300000001000000
...................................................................................................GGGGTGAAACTGTACGTTATATGT..............................................................................................................................................................................2416.00600000100001202000
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................1915.00500040000001000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2315.00500040000000010000
....................................................................................................................................................TATAGCTTTTCCCCTT.....................................................................................................................................1615.00500000000005000000
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................1814.00411010000001000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................2314.00400030000001000000
..........................................................................................................................TGCCCTTCT-GTGAAA...............................................................................................................................................................1514.00400000012010000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2214.00400040000000000000
...................................................................................................GGGGTGAAACTGTACGT.....................................................................................................................................................................................1714.00400000000004000000
...................................................................................................GGGGTGAAACTGTACGTTATATC...............................................................................................................................................................................2314.00400200000002000000
...................................................................................................................................................GTATAGCTTTTCCCCT......................................................................................................................................1614.00400000000004000000
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................1913.00300020000001000000
...................................................................................................GGGGTGAAACTGTACGTTATAA................................................................................................................................................................................2213.00300000000001002000
...................................................................................................GGGGTGAAACTGTACG......................................................................................................................................................................................1623.00600000000006000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................2213.00300020000001000000
..................................................................................................................................................CGTATAGCTTTTCCCCT......................................................................................................................................1713.00300000000003000000
......................................................................................................GTGAAACTGTACGTTATAT................................................................................................................................................................................1912.00200000000001100000
...................................................................................................GGGGTGAAACTGTACGTTATATGAAA............................................................................................................................................................................2612.00200000000000011000
.....................................................................................................GGTGAAACTGTACGTTATATG...............................................................................................................................................................................2112.00200010000001000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................2312.00200010000000100000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTG....................................................................................................................................2212.00200020000000000000
..........................................................................................................................TGCCCTTCT-GTGAAATTA............................................................................................................................................................1812.00200000000200000000
...................................................T----------ACAA------TCTGGACAAAATTGCT.................................................................................................................................................................................................................2112.00220000000000000000
..................................................................................................GGGGGTGAAACTGTACGTTATAT................................................................................................................................................................................2312.00200000020000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCA.......................................................................................................................................2012.00200000000110000000
..........................................................................................................................TGCCCTTCT-GTGAAAT..............................................................................................................................................................1612.00200000001100000000
.....................................................................................................................................................ATAGCTTTTCCCCTT.....................................................................................................................................1512.00200000000002000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................1912.00200020000000000000
..........................................................................................................AACTGTACGTTATATG...............................................................................................................................................................................1612.00200000000002000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................2112.00200000000110000000
...................................................................................................GGGGTGAAACTGTACGTTATATGAT.............................................................................................................................................................................2512.00200000000000002000
......................................................................................................GTGAAACTGTACGTT....................................................................................................................................................................................1512.00200000000002000000
.........................................................................................................AAACTGTACGTTATATG...............................................................................................................................................................................1712.00200000000101000000
..................................................................................................GGGGGTGAAACTGTACGTTATA.................................................................................................................................................................................2212.00200000000000020000
..............................................................................................................................................TAAGCGTATAGCTTTTCCA........................................................................................................................................1911.00100000000100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...................................................................................................................................2411.00100010000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTGT....................................................................................................................................2311.00100000000001000000
...................................................................................................................................................GTATAGCTTTTCCCCTTA....................................................................................................................................1811.00110000000000000000
...................................................................................................GGGGTGAAACTGTACGTTATAAAG..............................................................................................................................................................................2411.00100000001000000000
...................................................................................................GGGGTGAAACTGTACGTTATATGTAAG...........................................................................................................................................................................2711.00100000001000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2111.00100010000000000000
...................................................................................................GGGGTGAAACTGTACGTTATATGTGC............................................................................................................................................................................2611.00100000010000000000
..................................................................................................GGGGGTGAAACTGTACGTTATATGAA.............................................................................................................................................................................2611.00100000000000001000
....................................................................................................................................................TATAGCTTTTCCCCT......................................................................................................................................1511.00100000000001000000
...................................................................................................GGGGTGAAACTGTACGTTATATGTGCCC..........................................................................................................................................................................2811.00101000000000000000
.................................................................................................................................................GCGTATAGCTTTTCCCCT......................................................................................................................................1811.00100010000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA...............................................................................................................................2811.00100010000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTG..........................................................................................................................................1721.00200000000002000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA................................................................................................................................2711.00100010000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCAAA.....................................................................................................................................2211.00100000000000001000
..............................................................................................................................................TAAGCGTATAGCTTTTCCAA.......................................................................................................................................2011.00100000000010000000
........................................................................................................GAAACTGTACGTTATAT................................................................................................................................................................................1711.00100000010000000000
........................................................................................................GAAACTGTACGTTATA.................................................................................................................................................................................1611.00100000010000000000
...........................................................................................................ACTGTACGTTATATG...............................................................................................................................................................................1511.00100000000001000000
..............................................................................CAAAATTGCTCAACATTTTGG......................................................................................................................................................................................................2111.00100010000000000000
..................................................................................................GGGGGTGAAACTGTACGTT....................................................................................................................................................................................1911.00100001000000000000
...............................................................................................................................TTCT-GTGAAATTCATAAGCGTATAGC...............................................................................................................................................2611.00100010000000000000
.........................................................................................................AAACTGTACGTTATA.................................................................................................................................................................................1511.00100000001000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCCC.....................................................................................................................................2211.00100000000001000000
...................................................................................................GGGGTGAAACTGTACGTTATAAA...............................................................................................................................................................................2311.00100000000010000000
.......................................................................................................TGAAACTGTACGTTATA.................................................................................................................................................................................1711.00100000000001000000
..................................................................................................................................................CGTATAGCTTTTCCCCTTAA...................................................................................................................................2011.00100000000001000000
...................................................................................................GGGGTGAAACTGTACGTTATATGTG.............................................................................................................................................................................2511.00100000000000100000
....................................................................................................GGGTGAAACTGTACGTTATAT................................................................................................................................................................................2111.00100000100000000000
...................................................................................................GGGGTGAAACTGTACGTTATATGC..............................................................................................................................................................................2411.00110000000000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCAA......................................................................................................................................2111.00100000000000001000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................2521.00200010000000001000
droSec2
GA---------------TTC-AAAATATTACTT-----------------GT----------ACAA------TCTGGACAAAATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCT-GTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAAC--GAAA-AGT------------G--GTTTTCA--TTCACAG-------AGTATAAATGTA------------------------------------C-CCA---------TTSizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2217805.0078056950138385332
...................................................................................................GGGGTGAAACTGTACGTTATATG...............................................................................................................................................................................2311036.00103614499485308
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................211978.009787652549139
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................231365.0036531871624
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................211337.00337328027
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................201123.00123119031
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201106.00106850714
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................23155.005550131
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................20135.003535000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................22123.002322001
...................................................................................................GGGGTGAAACTGTACGTTATAT................................................................................................................................................................................22122.002242115
....................................................................................................GGGTGAAACTGTACGTTATATG...............................................................................................................................................................................22120.002017021
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24119.001918010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................23114.001414000
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................19112.001212000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................23112.001212000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22111.001110001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................22110.00106040
...................................................................................................GGGGTGAAACTGTACGTTATA.................................................................................................................................................................................2119.0095130
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................2319.0098001
..................................................................................................GGGGGTGAAACTGTACGTTATATG...............................................................................................................................................................................2419.0094032
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................1818.0086110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................2516.0065010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2215.0055000
.....................................................................................................GGTGAAACTGTACGTTATATG...............................................................................................................................................................................2115.0054010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2415.0053110
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................1915.0055000
...................................................................................................GGGGTGAAACTGTACGTTATATGA..............................................................................................................................................................................2414.0041120
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................2114.0044000
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................1914.0042002
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTAT....................................................................................................................................2314.0044000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................2113.0033000
..........................................................................................................................TGCCCTTCT-GTGAAATTCA...........................................................................................................................................................1913.0033000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................2513.0033000
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................1913.0033000
...................................................................................................GGGGTGAAACTGTACGTTA...................................................................................................................................................................................1912.0020011
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................2412.0021100
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...................................................................................................................................2412.0022000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTGT..................................................................................................................................2512.0020200
...................................................................................................GGGGTGAAACTGTACGTTAT..................................................................................................................................................................................2012.0020020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCT.......................................................................................................................................2012.0021001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2612.0022000
..........................................................................................................................TGCCCTTCT-GTGAAATTC............................................................................................................................................................1812.0020020
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................2312.0021001
...................................................................................................GGGGTGAAACTGTACGTTATATGTGCC...........................................................................................................................................................................2712.0021010
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2112.0022000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAACC.................................................................................................................................2612.0020110
..................................................................................................................................................CGTATAGCTTTTCCCCTTT....................................................................................................................................1912.0021001
...................................................................................................GGGGTGAAACTGTACGTT....................................................................................................................................................................................1812.0020020
....................................................................................................GGGTGAAACTGTACGTTATAT................................................................................................................................................................................2111.0011000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTTT...................................................................................................................................2211.0011000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCG.......................................................................................................................................2011.0011000
...................................................................................................GGGGTGAAACTGTACGTTATATGTG.............................................................................................................................................................................2511.0010001
................................................................................................................................................AGCGTATAGCTTTTCCCCTG.....................................................................................................................................2011.0011000
...................................................................................................GGGGTGAAACTGTACGTTATATT...............................................................................................................................................................................2311.0010010
....................................................................................................GGGTGAAACTGTACGTTATATC...............................................................................................................................................................................2211.0011000
................................................................................................................................................AGCGTATAGCTTTTCCCC.......................................................................................................................................1811.0011000
..................................................................................................GGGGGTGAAACTGTACGTTAT..................................................................................................................................................................................2111.0011000
...................................................................................................................................................GTATAGCTTTTCCCCTTT....................................................................................................................................1811.0011000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCC..................................................................................................................................2511.0010001
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTCT....................................................................................................................................2311.0011000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTC.....................................................................................................................................2111.0011000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTACC..................................................................................................................................2511.0010100
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTGT....................................................................................................................................2311.0010001
...................................................................................................GGGGTGAAACTGTACGTTATATGTT.............................................................................................................................................................................2511.0011000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...................................................................................................................................2411.0010010
..................................................................................................GGGGGTGAAACTGTACGT.....................................................................................................................................................................................1811.0011000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGT...................................................................................................................................2411.0010001
.................................................................................................................................................GCGTATAGCTTTTCCCCTTT....................................................................................................................................2011.0011000
...................................................................................................GGGGTGAAACTGTACGTTATATC...............................................................................................................................................................................2311.0010100
....................................................................................................GGGTGAAACTGTACGTTATATGAA.............................................................................................................................................................................2411.0011000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................2111.0011000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTGGC...................................................................................................................................2411.0011000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCTA......................................................................................................................................2111.0010001
droYak3
ACATTTAACTTAGCAAAATC-AAAATATTAATT-----------------GT----------ACAATCACCATCT-GACAAAATTGCTCAACATTTTAGGGGGTTAAACTGTACGTTATATGTGCCCTTTT-GT-AAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAACAGCAAC--AAAT-AGT------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................22128054.002805442209148392112625254500077
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................2115995.0059951419023924164284130000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2111568.00156801560601100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................2111086.00108601108500000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................231983.00983086388871520000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................221631.0063101661500000000
...................................................................................................GGGGTTAAACTGTACGTTATATG...............................................................................................................................................................................231398.003984313588100514120010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201355.003551161176141200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................231153.001530136453400001
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................201135.001350134100000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................201122.001220117500000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................22157.0057055100100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................23147.00470128000000027
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................23146.0046046000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22142.0042042000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24138.0038034110200000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................22136.0036028800000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................24129.0029019630100000
...................................................................................................GGGGTTAAACTGTACGTTATA.................................................................................................................................................................................21128.0028917110000000
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................19127.0027025200000000
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................18119.0019018100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................23117.0017016001000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................19114.001407600100000
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................19111.0011010100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................21111.0011001000100000
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................19110.0010010000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................2519.00907200000000
....................................................................................................GGGTTAAACTGTACGTTATATG...............................................................................................................................................................................2218.00807100000000
..................................................................................................GGGGGTTAAACTGTACGTTATATG...............................................................................................................................................................................2417.00713120000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................2417.00705110000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2217.00707000000000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................2117.00707000000000
...................................................................................................GGGGTTAAACTGTACGTTAT..................................................................................................................................................................................2016.00601500000000
...................................................................................................GGGGTTAAACTGTACGTTATAT................................................................................................................................................................................2216.00600400020000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2416.00606000000000
...................................................................................................GGGGTTAAACTGTACGTTATATGTGCCC..........................................................................................................................................................................2815.00502300000000
...................................................................................................GGGGTTAAACTGTACGTTATATT...............................................................................................................................................................................2315.00500041000000
...................................................................................................GGGGTTAAACTGTACGTTATATGTGCC...........................................................................................................................................................................2714.00431000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2614.00404000000000
...................................................................................................GGGGTTAAACTGTACGTTATATGT..............................................................................................................................................................................2414.00411010010000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCT......................................................................................................................................2214.00404000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTGT....................................................................................................................................2313.00303000000000
..........................................................................................................................TGCCCTTTT-GT-AAATTCA...........................................................................................................................................................1813.00300120000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................2113.00303000000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................2412.00202000000000
..........................................................................................................................................TTCATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2612.00202000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA...............................................................................................................................2812.00202000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...................................................................................................................................2412.00202000000000
.................................................................................................................................................GCGTATAGCTTTTCCCCTTT....................................................................................................................................2012.00202000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...................................................................................................................................2412.00202000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................2512.00202000000000
.................................................................................................................................................GCGTATAGCTTTTCCCCT......................................................................................................................................1812.00201100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...................................................................................................................................2412.00202000000000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................2312.00202000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCT.......................................................................................................................................2012.00201100000000
...................................................................................................GGGGTTAAACTGTACGTT....................................................................................................................................................................................1812.00210100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGT...................................................................................................................................2412.00200101000000
..............................................................................................................................................TAAGCGTATAGCTTTTCC.........................................................................................................................................1812.00202000000000
...................................................................................................GGGGTTAAACTGTACGTTATATGA..............................................................................................................................................................................2412.00200110000000
................................................................................AAATTGCTCAACATTTTAG......................................................................................................................................................................................................1912.00201100000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCAC......................................................................................................................................2112.00200200000000
...........................................................................................................................................TCATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................2511.00101000000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAT..................................................................................................................................2511.00101000000000
...................................................................................................................................................GTATAGCTTTTCCCCTTT....................................................................................................................................1821.00201100000000
droEre2
CA--------------------AAGTATTACTT-----------------GT----------AGAA------CCT-GACAAAATTGCTCAACATTTTAGGGGGTGAAACTGTACGTTATATGTGTCCTTCT-GTAAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTACAGCAACAGCAAC--AAAA-AGT------------G--AATCTTA--TTCA--------------------------------------------------------------------TAGAGTSizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................22114178.00141781287840013921314435054
...................................................................................................GGGGTGAAACTGTACGTTATATG...............................................................................................................................................................................2311657.001657170222017213811350
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCT......................................................................................................................................2111610.00161011662351319401370
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTT.....................................................................................................................................211679.00679675111010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT....................................................................................................................................231515.00515453614581514
..............................................................................................................................................TAAGCGTATAGCTTTTCCCC.......................................................................................................................................201156.0015612419101110
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA....................................................................................................................................231102.0010288211640
................................................................................................................................................AGCGTATAGCTTTTCCCCTT.....................................................................................................................................20178.007873400100
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCC......................................................................................................................................21165.006516400000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCT......................................................................................................................................20148.004846200000
...................................................................................................GGGGTGAAACTGTACGTTATATT...............................................................................................................................................................................23143.0043000280150
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.....................................................................................................................................22143.004353701000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...................................................................................................................................24141.004136004100
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG....................................................................................................................................23135.003528010060
...................................................................................................GGGGTGAAACTGTACGTTATAT................................................................................................................................................................................22134.0034200124160
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC....................................................................................................................................23131.003123510002
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...................................................................................................................................24130.003029000100
....................................................................................................GGGTGAAACTGTACGTTATATG...............................................................................................................................................................................22122.002218000130
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.....................................................................................................................................22121.002120100000
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTT....................................................................................................................................22120.002020000000
...................................................................................................GGGGTGAAACTGTACGTTATA.................................................................................................................................................................................21116.00164105060
...................................................................................................GGGGTGAAACTGTACGTTATATA...............................................................................................................................................................................23116.001600010150
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.....................................................................................................................................23114.001414000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCC........................................................................................................................................19114.00148110040
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCG......................................................................................................................................21111.001110000010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..................................................................................................................................25111.001111000000
..........................................................................................................................TGTCCTTCT-GTAAAATTCA...........................................................................................................................................................19110.00105210020
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...................................................................................................................................24110.00109000100
...................................................................................................GGGGTGAAACTGTACGTTATATC...............................................................................................................................................................................23110.001000000100
...............................................................................................................................................AAGCGTATAGCTTTTCCCC.......................................................................................................................................1919.0099000000
................................................................................................................................................AGCGTATAGCTTTTCCCCT......................................................................................................................................1917.0076000100
..................................................................................................................................................CGTATAGCTTTTCCCCTT.....................................................................................................................................1817.0076000010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.....................................................................................................................................2216.0066000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCA......................................................................................................................................2115.0055000000
..................................................................................................GGGGGTGAAACTGTACGTTATATG...............................................................................................................................................................................2415.0052000030
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTA....................................................................................................................................2215.0055000000
...................................................................................................GGGGTGAAACTGTACGTTA...................................................................................................................................................................................1914.0041002010
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA................................................................................................................................2714.0044000000
.................................................................................................................................................GCGTATAGCTTTTCCCCTT.....................................................................................................................................1914.0044000000
.............................................................................................................................................ATAAGCGTATAGCTTTTCCCCT......................................................................................................................................2213.0033000000
...................................................................................................GGGGTGAAACTGTACGTTATATGTGTC...........................................................................................................................................................................2713.0030000120
...................................................................................................GGGGTGAAACTGTACGTTATATGA..............................................................................................................................................................................2413.0030101100
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...................................................................................................................................2413.0033000000
...................................................................................................GGGGTGAAACTGTACGTTATATGTG.............................................................................................................................................................................2512.0021000100
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTA.....................................................................................................................................2112.0022000000
...................................................................................................GGGGTGAAACTGTACGTTATATGG..............................................................................................................................................................................2412.0021100000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTA....................................................................................................................................2112.0021001000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..................................................................................................................................2512.0022000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.................................................................................................................................2612.0022000000
.................................................................................................AGGGGGTGAAACTGTACGTTA...................................................................................................................................................................................2112.0020000020
...............................................................................................................................................AAGCGTATAGCTTTTCCCCTTC....................................................................................................................................2212.0022000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...................................................................................................................................2412.0022000000
...............................................................................................................................................AAGCGTATAGCTTTTCCC........................................................................................................................................1811.0011000000
..............................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA...............................................................................................................................2811.0011000000
..........................................................................................................................TGTCCTTCT-GTAAAATTCAA..........................................................................................................................................................2011.0011000000
................................................................................................................................................AGCGTATAGCTTTTCCCCTTT....................................................................................................................................2111.0011000000
...................................................................................................GGGGTGAAACTGTACGTTATATGTGTCC..........................................................................................................................................................................2811.0011000000
...................................................................................................GGGGTGAAACTGTACGTTAGG.................................................................................................................................................................................2111.0011000000
...................................................................................................GGGGTGAAACTGTACGTTATAC................................................................................................................................................................................2211.0010100000
...................................................................................................GGGGTGAAACTGTACGTTATG.................................................................................................................................................................................2111.0010100000
..............................................................................................................................................TAAGCGTATAGCTTTTCCA........................................................................................................................................1911.0011000000
..................................................................................................................................................CGTATAGCTTTTCCCCTTT....................................................................................................................................1911.0011000000
.....................................................................................................GGTGAAACTGTACGTTATATG...............................................................................................................................................................................2111.0011000000

Generated: 10/20/2015 at 07:36 PM