ID:

dmo_397

 Coordinate:

scaffold_6308:131023-131211 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.9 -16.7 -16.6

Flybase annnotation

CDS [Dmoj\GI11060-cds]; CDS [Dmoj\GI11060-cds]; exon [dmoj_GLEANR_10978:8]; exon [dmoj_GLEANR_10978:9]; intron [Dmoj\GI11060-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-
R1_DYaLINER1+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTAGCCTAGCGGCGGCTACTCAGCACCAGCAGCAGCAGCAGCAGGCACAGCAACAGGCACAGCAACAGGCACAGCAGCAGGCGCAGCAGCAAGCGCAGCAGCAGGCGCAGCAACAGGCACAGCAACAGGCACAGCAACAGGCACAGCAGCAGCAACAGGCGCAACAGCAGGCACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAGCAGTTAACTAGCACCACATTGACCGCCAGCTCACCCACACAGAATCCCATACTGGCCATGACATCCATGATGAATGCAA
**********************************************************************************************************.((.((.....((...((.....))...)).....))...)).((.((.....))))....((((....(((.((....((.((.((....)).)).))....)).)))..)).))...**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 V041
embryo
 V049
head
..............................................................................................................................................................GGCGCAGCAGCAGGCACAGCAGC............................................................................................................ 23 1 1 1.00 1 1 0 0
...........................................................................................................................................................................................................GCAACAGCAGTTAACTAGCACC................................................................ 22 0 1 1.00 1 1 0 0
...............................................................................................................................................................................................................................CCACATTGACCGCCAGCTCACCCACAC....................................... 27 0 1 1.00 1 0 1 0
..........................................................................................................CGCAGCAACAGGCACAGCAACAGGCAC............................................................................................................................................................ 27 0 1 1.00 1 1 0 0
.........................................................................................................................................ACAGGCACAGCAGCAGCAACAGGCGCA............................................................................................................................. 27 0 1 1.00 1 0 1 0
................................................................................................................................................CAGCAGCAGCAACAGGCGCAACAGC........................................................................................................................ 25 0 2 0.50 1 1 0 0
.................................................................................................................................................AGCAGCAGCAACAGGCGCAACAG......................................................................................................................... 23 0 2 0.50 1 1 0 0
...........................................................................................................GCAGCAACAGGCACAGCA.................................................................................................................................................................... 18 0 3 0.33 1 1 0 0
..............................CAGCAGCAGCAGCAGGCACAGCA............................................................................................................................................................................................................................................ 23 0 3 0.33 1 0 1 0
..............................................................................................................GCAACAGGCACAGCAACAGGCAC............................................................................................................................................................ 23 0 3 0.33 1 1 0 0
..................................................GCAACAGGCACAGCAACAGGCAC........................................................................................................................................................................................................................ 23 0 3 0.33 1 1 0 0
..........................................................................................................................GCAACAGGCACAGCAACAGGCAC................................................................................................................................................ 23 0 3 0.33 1 1 0 0
..................................AGCAGCAGCAGGCACAGCA............................................................................................................................................................................................................................................ 19 0 5 0.20 1 1 0 0
....................................................................................................AGGAGACGCAGCGACAGGCACA....................................................................................................................................................................... 22 3 10 0.10 1 0 0 1
..................................................................................................................................................................TAACAGCAGGCAGAGCAGCCGC......................................................................................................... 22 3 10 0.10 1 1 0 0
.....................................................................................ATCAGCAAGCGCAGCAGC.......................................................................................................................................................................................... 18 1 13 0.08 1 1 0 0
..............................CAGCAGCAGCAGCAGGCAC................................................................................................................................................................................................................................................ 19 0 16 0.06 1 1 0 0
.......................................................................................................................................................AGCAACAGGGGCAACAGCAG...................................................................................................................... 20 1 20 0.05 1 0 0 1
.................................................................................................................................................................................................AACAGCAGCAGCAACAGCA............................................................................. 19 0 20 0.05 1 0 1 0

Anti-sense strand reads

CGATCGGATCGCCGCCGATGAGTCGTGGTCGTCGTCGTCGTCGTCCGTGTCGTTGTCCGTGTCGTTGTCCGTGTCGTCGTCCGCGTCGTCGTTCGCGTCGTCGTCCGCGTCGTTGTCCGTGTCGTTGTCCGTGTCGTTGTCCGTGTCGTCGTCGTTGTCCGCGTTGTCGTCCGTGTCGTCGTCGTCGTCGTCGTTGTCGTCGTCGTTGTCGTCAATTGATCGTGGTGTAACTGGCGGTCGAGTGGGTGTGTCTTAGGGTATGACCGGTACTGTAGGTACTACTTACGTT
****************************************************************.((.((.....((...((.....))...)).....))...)).((.((.....))))....((((....(((.((....((.((.((....)).)).))....)).)))..)).))...********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V056
head
 V041
embryo
......................................................................................................................................................................................................................................CTGGCGGTCGAGTGGGTGTGT...................................... 21 0 1 1.00 1 1 0 0
......................................................................................................................................................................................................................................TCGGCGGTCGAGTGGGTATGT...................................... 21 3 6 0.17 1 0 1 0
..............................................................CGTTGTTCGTGTCGTAGTCCAC............................................................................................................................................................................................................. 22 3 13 0.08 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6308:130973-131261 - dmo_397 GCTAG-CCTAGCGGCGGCTACT---------C---A---------GCACC---------AGCAGCAGCAG------------CAGCAGGCACAGCAACAG------------------------------------GCACAGCAACAGGC---ACAGC------AGCA------GG--C------------GCAGC------------A------GCAA------GCGCAGCAGCAG------------------------GCGCAGCA------------------AC---A---GGCACAGCAA--------------------------------------------------------CAGGCACAGCAACAGGCA------------------C---------------------------------------AGCAGCAGCAACAGGCGCAAC---------------------------------------------------------AGCAGGCACAGCAGCAGCAGCAGCAGCAA--------------------------------------CAGCAGCA-------------------------------GCAACAGC------------AGTTAACTAGCAC----------------------------------------------------------C------ACATTGACC------------------------------------------------GCCAGCT------------C--ACCCACACAGA------------------------------------ATCCCATACTG-GCCATGACA-TCCATGATGAA----T--GCAA
droVir3 scaffold_12928:4745182-4745426 - GCA--AC----------------------AACAACAGCAGC------AGC---------------------------------AGCAGCAGCAGCAGCAGCTTATAACGGCCAGCATAGCGGCTGCCACACAGCAGCACCAGCAACAACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------CA------GCAGCAGCA---GGCACAGC--------AGCAGGC---GCAGCAG------CAGGCACAGCAACAG---------------------------------------------------GCACAGCAGCA------------------------------------------------------GGCGCA---------------------------------------------A------------------------------------------------------------------CA---------------------------GC------------AATTGTCCAGCAG----------------------------------------------------------C------ACGTTAACT------------------------------------------------GCTGCCT------------C--ACCCACACAGA------------------------------------ATCCCATATTG-GCCATGACG-TCCATGATGAA----T--GCGA
droGri2 scaffold_14828:10786-11066 - AGCAG-C----------------------AGCAGCA---------GCAGC---------AGCAGCAGCAG------------CAGCAGCAGCAGCAGCAG------------------------------------CAGCAGCA---------GCAGCAGCAGCA---------GC--AG---------------CA------GCAGCAGCAGCAGCAGCA---------GCAGCAG------------------------CAGCA---------------------GC---A---GCAGCAGCAG---CAGCAG--------------C------AGC---AG------CAG---CAGCAGCAG---------C------------------------------AGCAG---CAGCAGCAGCAGCAGC---------------------------------------AGCAGCA------------------------GCAGCAGCA------GCAG---CA---------------------------------------------------GCAGCA--GCAG-------------CA---------------------------GCAGCAGCAGCAGCA--------GCAGTTAAAACAGCA------------------------------------GC---------A------GCATCAGCAGCAGCAAAAACAGCAGCAGCAACA------------GC---AGCATCAGC---------------A----------------------------------------------------------------------------------GC----A--GCAG
droWil2 scf2_1100000004968:2076103-2076381 + GCA--ATGCTG--------------CAGCATC---A---------GCAAC---------AACAACAGCAG------------CAGCAACAACAGCATCAG------------------------------------CAACAGCA---------ACAGCAGCAACAATGGCA---GCAA-----------------CT------GCAGCA------GCAA------CAACAACAACAG------------------------CAGCAACA------------------AC---A---ACAGCAGCAG---CAACAA--------------CAGCA---------A------CAG---CAACAACAA------------CTGCAG------------------------------CAGCAACAACAAC------------------------------------------------------------------------------------------AG---CAGCA------GCAACAACAGCATCAG---------CA---------------ACAG--CAACAGCAGCA-------------------------------ACA------------ATGGCA--------GCA------------------------------------------------GCAACAACAGCA------ACATCAACTG------CAGCAGCAACAGCAACA------------GC---AGCAACAAT---------------G----------------------------------------------------------------------------------GC----A--GCAA
dp5 Unknown_singleton_1849:5216-5492 + AGCAA-CA----------------------TATGCA---------ACAGC---------AACATCTGCAG------------CAGCAACATCTGCAGCAG------------------------------------CAACATCT---------GCAGCAGCAACA---------GC--AGCAACAACAGAAGCA---------------------GCAGCA---------ACAGCAG------------------------CAGCA---------------------GC---A-----------------------------------GCAGGTGCAGCAGCAACATCAGCAA---CAGCAACAT------------------CA---------------GCAGCAACAG---------CAGCAAAAGC---------------------------------------AACATCA------------------------GCAGCAACA------GCAG---CA---------------------------------------------------GCAGCA--GCAA-------------CA---------------------------ACAGC-----------------------------------AACAACAGCAACATCAGCAACAAC---------------------------------------------------------AACA------------------------GCTGCAG------------C--CCCCACCAAGA------------------------------------CCCC---------CAATGACGCTCAGTGACATA----T--TCAA
droPer2 scaffold_23:1534426-1534744 - GGTAG-CT-TG--------------CAGCAGCAACA---------CCAAT---------CGCAACAGCAG------------CAGCAATACCAGCAGCAG------------------------------------CACCAGCAACTGTTGACACAGCAGCAACTTTTGTC---GCAA-----------------CA------GCAACA------G---CA------------A-----GCAG------------------CAGCA---------------GCAGCAAT---A------TCCGCAG--------------------------CAGCAGCAGCAG------------------CAC------------TTC------------------CAGCAGCAGCAG---------CAGCAGCAGCAGCAACACTTGCAACAGCAACACGC---------------------------------------------ACAGCAGCA------GCAG---CA------GCAGCAGCATCA------------------------------------------------------------------------------------------------GTCGCA--------GCA------------------------------------------------GCAGCAACATTT------G---------------CC---------------------------AC---A------GCAGCAGCATCAGAT-------AACCGCACAAATTCAAACCATGAAGGATCAACCGCAACAG-----------------------------CCAATGGTGAG----T--AC-A
droAna3 scaffold_13117:5219596-5219889 - dan_1405 AATCC-AGTAGCACCGCTCCAA---C---AGCAACAGCAGC------AACTCCAGC---AGCAGCAGCAG------------CCACAGCAACAGCAACAG------------------------------------CAGCAGCC---------ACACCATCAACA------GCAG--------------------C------------A------GACATC------CCAGCAACAGCAGCAGCATC------AAGCACAACAACAACA------------------TCAGCA------GCAGCAGCA---ATCACA--------------------------------------------------------AC---------------------------AACATAAGCAGCAACAGCAGCAGCA------------------------------------------CCAG------------CA---------------------------------------------------------------------------------------GCAG--CAACATCTTCA----------GCAGAAGCAGCAACAGCAGCAGCAAC-----------------------------------------ATCAACCAACACAGCA------------------GCAGC------------------------------------------AATCGCAGGC------AC---A------TCAGCAACTCCAGGCTCA----------------------------------------------------------------------------------TC----A--GCAG
droBip1 scf7180000395567:7142-7421 - GCA--AC----------------------ACCAGCA---GCAACAACAGC---------AGCAACATCAG------------CT---------GCAACAG------------------------------------CACCAGCA---------ACAGTTACAACACCA------GC--A------------GCAGCAGCA---ACAGCA------ACAG---------CACCTGCAC------------------------CAGCA---------------------AC---AGCTTCAGCCGCAC------CAG--------------C------AGC---AA------AT------------------GCAAC---------------------------ACCACCAGCAGCAACAACAGCAGCAGC------------------------------------------------------------------------------AACAGCACCAG---CAGCT------GCTGCACGAGTCCCAG---------C--------------------------------------------------------------------------------------------------------------AGCAACAGCAGCAGCAGTA---CCACCCACATCACCTACATCCGCACAGCCTG---------------CCGCACCAGCAACAGCA------------GC---AGCAGCAAC---------------A----------------------------------------------------------------------------------GC----A--GCAA
droKik1 scf7180000302696:2003879-2004154 - CA--------G--------------C---AACAGCA------ACTTCAAC---------AGCAGCAAATG------------CAGCAAGTTCAGCAGCAG------------------------------------CAACTTCA---------TCAGCAGCAACA---------G--------------------CAACT---TCAGCA------GCAT------CAACTTCAACAG------------------------CTGCAGCT------------------AC---T---CCAGAAGCAG---CAGCAACT-----------------------------------------------------GCAACAGCCA------------------C---------------------------------------AGCACCTGCAACAGCCACAAC---------------------------------------------------------AGCAGCAACAGAAACTCCAACAGGAACTACAG---------CAGCA------------GAA-----A----------------CA---------------------------GAAACTCCATCATCA--------GCAGTTACTCCAGCAGCAGAATCTG------------------------------------------------------------AAACAGCAGCAGGAGGT------------CC---AGCAGATGC---------------A----------------------------------------------------------------------------------TC----A--GCAA
droFic1 scf7180000453438:44399-44656 - AGCAA-C----------------------AGCAACA---------GCGAC---------AGGATCAGCAG------------CAGCAGCAACAGCAACAG------------------------------------GATCAGCA---------GCAGCAGCAACAACAACA---GCAA-----------------TC------GCAACA------GGAGTCGGGACAACAGCAACAG------------------------CAGCAGCAA------------------C---A---AAATCAGCAG---CAGCAGCAGC--------A---------------A------------------------------CAGGAT------------------C------------------------ATCAGC------------------------------AGCAGCAGCAACAACAACAACAATCGCAACAGCAACAGCAGCAG------------------------------------------------------CAGCAGCA------------------------------------------------------------------------ACAGCA--------GCA------------------------------------------------GCAAGAACAGAA------A---------------CC---------------------------ACAGCC---AAAGCAACAAC---------A----------------------------------------------------------------------------------ACTATGT--GTAA
droEle1 scf7180000491047:337822-338098 - ACCA--CTG----------------C---TGCAGCA---GCAGCAACAGC---------AGCAGCAAGAG------------CAACAGCAACAACAGCAG------------------------------------CAAGAGCA---------ACAGCAACAACA------GCAGCAA-----------------C---------A---------------------GCAGCAGCAG---------------------------------------------CA---GCAACA------ACAGCAG--------------------------CAACAACAACAG------------------CAG------------ACACAACAGCAGCAACAACAAC---AGCAGCAGCAGCAACAACAGCAGCA------------------------------------------------------GCCGCA---------------------------------------------GCAACAACAACCA------------------------------C--------------A----------GCCCGTGCA-----------------------------------------GCAAATCCATCAACCGCAACAACAGCAACAGCAGCA---AC---------------------------------------------------------ATGCGCTGCAAATGCAACAGCCACA---ACAAC------------A----------------------------------------------------------------------------------GC----C--ACAA
droRho1 scf7180000779334:988774-989032 - AACAG-C----------------------AGCAACA---------TCAGC---------AGCAACAGCAG------------CAGCAGCAACAGCAGCAG------------------------------------CAGCAGCA---------ACAGCAGCAGCAACA------G--------------------C------------A------G---CA-------------------------------------CAACAGCAGCA---GCCAC---------------A------GCAGCAG---CAGCAACT-----------GCAACTGCAGCAGCAA------------------------------------------------------------------------------------C------------------------------AGCAACTGCAACAGCAACAGCAACTGCAGCAGCAACAGCAAC---------------TG---------------------------------------CAGCAGCAACAGCAACACCAGGA--GCTC---------------------------------------------------------------------TACCGCC------AGCAGCAGCAACATC-------------------------------------------------------GCACTAGC---ATGAGTGGCA------------------------------------------------------------------------------------------------------TAGCCAGCCAGCAGCACT----T--GCAA
droBia1 scf7180000302126:3398015-3398273 - ATCAC-CACAGCCAC----------C---AGCAGCA---------GCAGC------AACAC---CAGCAA------------CAGCAGCAACAACAGCAG------------------------------------CAGCAGCA---------ACAGCAGCAGCACCA------G--------------------------------------------------------------------------------------CAGCAGCAACACGCCCAGCAGCTGCAGC---A------CC--------------------------AGCAGCTGCAGCAGCAG------------------CAC------------GTGCAG------------------CAGCAGCAA---------CACCAG------------------------------------------------------------CAGCAGCAACACCACCACCACCAGCAACACCAG---CAGCT------GCATCACGATCCG------------C--------------------------------------------------------------------------------------------------------------AGCAACAGCATCCGCAGTA---CCACCCGCACCAGCTGCACGCCCACGC--------------------------------------------------------------------------------------------------------------------------------------------------------------CCTG----C--CCAC
droTak1 scf7180000414375:142507-142795 + CCCAG-CGCAGCCACGCCCATTGTGC---AGCAGCA---------GCAGC---------AGCAGCAGCAG------------CAACAGCAACAGCAAGTG----------------GTG-----------------CAGCAGCA---------ACAGGTGCAACA---------GCAA-----------------GTGATTCCACA---------G---------------CAAGTGGTGCAACA---------A------GAACAGCAA------------------G---T------AGTGCAGCAGCAGCAACAGC--------A---------------A------------------------------GTAGTGCAG------------------------------------------CAGG------------------------------AGCAACAGCAAG------------------------------------------TGGTG---CAACA------GCAACAGGTGCAA--------------------------------------CAGCAACAGCAA----CA---------------------------GGTGCAACAGCAACA--------GCAGTACAGCC-------------AAC---------------------------------------------------------------------------------------------------AGAGCTAC---------GAGGCACCCGGATATC----T------------------------------------------------GCCA-CCCACTTCCGC----C--GCTC
droEug1 scf7180000409538:197933-198193 + GCG--GCCCAA--------------CAGCAGC---A---------TCATC---------ATCATCAACAG------------CAGCAGCAACACCAACAG------------------------------------CAGCAGCA---------ACACCAGCAACA------TCAGCAG-----------------C------------A------G---CA---------------------------------------------------CGCCCAGCAGCTGCAAC---A------CC--------------------------AACAGCTGCAGCAGCAA------------------CAC------------GCC------------------CAGCAGCAACAT---------CAGCAGCAGC---------------------------------ATC---------------------------------ATCATCACCAGCAACACCAG---CAGCT------GCATCATGATCCC------------C--------------------------------------------------------------------------------------------------------------AGCAACAGCATCCGCAGTA---CCATCCCCACCAGCTGCATCCCCATTCTCTG---------------CC---------------------------CC---A------CCAGCAGC---------A----------------------------------------------------------------------------------AC----A--GCAA
dm3 chrX:10501771-10502044 - GCCGG-CCCAG--------------C---AGCAACT---------ACATC---------TCCATCAGCAG------------CAGCAGCAACAGCAACAG------------------------------------CAGCAGCA---------ACAGTCGCAGCACCA------GC--A------------ACAGCACCA---ACAGCA------G---CA---------------------------------------------------CGCCCAGCAACTGCAGC---A------CC--------------------------AACAGCTGCAGCAGCAA------------------CAC------------GCC------------------CAGCAGCATCAG---------CAGCAACAGC---------------------------------------ACC---------------------------ACCTCCACCAGCAGCACCAG---CAGCT------GCATCACGATCCG------------C--------------------------------------------------------------------------------------------------------------AGCAGCAGCATCCGCAGTA---CCATCCGCACCAGCTGCACGCCCATGCCCTG---------------CC---------------------------TC---A------CCAGCAGC---------A----------------------------------------------------------------------------------GC----A--GCAA
droSim2 3l:10324874-10325179 + GCCGC-CGTGGCCACG-----------GCAGC---A---------GTCG-------------CCCAACAG------------CAGCAGCAGCAGCAGCAG------------------------------------GCTGTCGT---------ACAGCAGCAACA------GCAGCAA-----------------G---------T-----------------------------------GG----CTGCCGCCGCCCAGCAGCAACA------------------CCAGCA------GCAGCAGCA---GCAACA-----------------------------------------------------ACAACAGGCC------------------G---------------------------------------TGCAGCAGCAACAGGCGGTCC---------------------------------------------------------AGCAGCAGCAGCAACATCAACAACAGCAG--------------------------------------CAGCAGCA----ACAACA---------------------------GC------------AAC--------A--------TGCCGCCGTAGCAGCCGCCGCAG---------------------------------------------------------------------------------------------CTGCCGC---------CTCGCATCCGCACATG--CATGCCGCTCATGCCCATGCCCA-C----------GCCCA---CG-CCCTTG--G-CCCACAATTGG----C--GCAA
droSec2 scaffold_3628:2138-2435 + AGTGG-C----------------------GGCAACA---------GCAGC---------GGCGCAG---TCACCACCAGCAGAGGCAGCAGCAGCGACGC------------------------------------AGTCGCCA---------CTGGCAGCAGCA------GCAGCAG-----------------C------------G------G---CG------CAGTCACCACCAGCAGCAAC------AG------TAGCAGCGACGCAG------------TCACCA------CCAGCAGCA---ACAG--------------------------------------------------------CAGCG---A---CG---------CAGTT---GCCACCGGAAGCAGCAGCATCGGCGCG--------------------------GTC----------ACCAC------------C------------------------------AG---CAGCA------GCAGCCACGCAGTCAC---------C---------------------------------------------------------------------------ACCAACAGCA-----------------------------------GCAGCGACG---CAGTCACCTCCAGCAGCAACGGCGCAGTCAC---------------CA---------------------------CC---AGCAGCGGCAGCAG-------------------------------------------------------------------------------------CAGCGACGCG----G--GC-A
droYak3 3L:8358703-8358992 - GCA--GC----------------------AGCAGAA---------TCTGC---------ACAC------GCAGCAC------CAGCACAATCTGCAGGCG------------------------------------CAGCATCA---------GAGCCACTCGCA---------GT--TGCAGCAACACAGTCA---------------------GCAGCA---------AAGTCAG------------------------CAGCAGCA------------------ACAGCA------GCAGCAGCA---ACAACA--------------------------------GCAA---CAGCAGCAG------------------CAGCAGCAACAGCAAC---AGCAGCAGCAGCAACAACAGC---------------------------------------------AAC---------------------------------------------AGCAGCAACA------GCAGCA------------------------------------------------------------------------------------ACA------GC-----------------------------------AGCAACAACAACAGCAGCAACAGC------------------AGCA------G---------------TT---------------------------AC---A------GCTGCAGC--------------A--------------------------------------ACAAAATGATATCTTACTGCGCGAGGACA-TCGATGATATA----GACGCCT
droEre2 scaffold_4784:3586551-3586822 + GCA--ACACAA-------------------CCAGCA---GCAGCATCAGC---------AGCAGCAGCAG------------CAGCATCAACAGCAGCAG------------------------------------CAGCAGCA---------ACAGCAGCAACA------GCAGCAA-----------------C---------AGCA------GCAG---------C------------------------------------A------------------------------------------------GCA--ACAACAGCAACAGCAGCAGCAGCAA------------------CAG---------------CAG------------------CAGCATCAA---------CAGCAACAGC------------------------------AGCAACA---------------------------------GCAACAGCAGC------AG---CAGTT------------GCAGCCACAACAGCAGCTGCAGCCGCA-----------------AC----------------------------------------------------AGCAGCA--------GCA------------------------------GTT---ACA------------------------------------------------------------------------------------GCTGCAG------------C--A--------------------------------------GCCAAATGATATTTTGCTGCGCGAGGATA-TCGATGACATA----GACGCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCTAG-CCTAGCGGCGGCTACT---------C---A---------GCACC---------AGCAGCAGCAG------------CAGCAGGCACAGCAACAG------------------------------------GCACAGCAACAGGC---ACAGC------AGCA------GG--C------------GCAGC------------A------GCAA------GCGCAGCAGCAG------------------------GCGCAGCA------------------AC---A---GGCACAGCAA--------------------------------------------------------CAGGCACAGCAACAGGCA------------------C---------------------------------------AGCAGCAGCAACAGGCGCAAC---------------------------------------------------------AGCAGGCACAGCAGCAGCAGCAGCAGCAA--------------------------------------CAGCAGCA-------------------------------GCAACAGC------------AGTTAACTAGCAC----------------------------------------------------------C------ACATTGACC------------------------------------------------GCCAGCT------------C--ACCCACACAGA------------------------------------ATCCCATACTG-GCCATGACA-TCCATGATGAA----T--GCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGC------------AGTTAACTAGCAC----------------------------------------------------------C------..........................................................................................................................................................................2211.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------------------------------C------ACATTGACC------------------------------------------------GCCAGCT------------C--ACCCACAC...................................................................................2711.001010000
......................................................................................................................................................................................................................................................................CGCAGCA------------------AC---A---GGCACAGCAA--------------------------------------------------------CAGGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................ACAGGCA------------------C---------------------------------------AGCAGCAGCAACAGGCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------AGCAGCAGCAACAGGCGCAAC---------------------------------------------------------AGC...................................................................................................................................................................................................................................................................................................................................................................................2520.501000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAGGCGCAAC---------------------------------------------------------AG....................................................................................................................................................................................................................................................................................................................................................................................2320.501000010
.......................................................................................................................................................................................................................................................................GCAGCA------------------AC---A---GGCACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000010
.............................................................CAGCAGCAG------------CAGCAGGCACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331010000
..........................................................................................................................................................................................................................................................................GCA------------------AC---A---GGCACAGCAA--------------------------------------------------------CAGGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000010
.............................................................................................GCAACAG------------------------------------GCACAGCAACAGGC---AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000010
..............................................................................................................................................................................................................................................................................................................GCAA--------------------------------------------------------CAGGCACAGCAACAGGCA------------------C---------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000010
.................................................................AGCAG------------CAGCAGGCACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.201000010
.............................................................CAGCAGCAG------------CAGCAGGCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.061000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------CAGCAGCA-------------------------------GCAACAGC------------A.......................................................................................................................................................................................................................................................19200.051010000
droVir3
GCA--AC----------------------AACAACAGCAGC------AGC---------------------------------AGCAGCAGCAGCAGCAGCTTATAACGGCCAGCATAGCGGCTGCCACACAGCAGCACCAGCAACAACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------CA------GCAGCAGCA---GGCACAGC--------AGCAGGC---GCAGCAG------CAGGCACAGCAACAG---------------------------------------------------GCACAGCAGCA------------------------------------------------------GGCGCA---------------------------------------------A------------------------------------------------------------------CA---------------------------GC------------AATTGTCCAGCAG----------------------------------------------------------C------ACGTTAACT------------------------------------------------GCTGCCT------------C--ACCCACACAGA------------------------------------ATCCCATATTG-GCCATGACG-TCCATGATGAA----T--GCGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................GCAACAG---------------------------------------------------GCACAGCAGCA------------------------------------------------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000200000000000000000000000000000
................................................................................................GCAGCTTATAACGGCCAGCATAGCGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CAGCA---GGCACAGC--------AGCAGGC---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ACCAGCAACAACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.252002000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GCA---GGCACAGC--------AGCAGGC---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ACCAGCAACAACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------CA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.201001000000000000000000000000000000000000000000000000000000000000
......C----------------------AACAACAGCAGC------AGC---------------------------------AGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153003000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGCAG------CAGGCACAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................AGCAGCACCAGCAACAACA---AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.071000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................AACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------CA------GCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
..A--AC----------------------AACAACAGCAGC------AGC---------------------------------AG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CAACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------CA------GCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
................................AACAGCAGC------AGC---------------------------------AGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
.............................AACAACAGCAGC------AGC---------------------------------AGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
.CA--AC----------------------AACAACAGCAGC------AGC---------------------------------AG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................ACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------CA------GCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................AGCAACAACA---ACAAC------AGCA------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000100000000000000000000000000000000000000000000
.................................................C---------------------------------AGCAGCAGCAGCAGCAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.CA--AC----------------------AACAACAGCAGC------AGC---------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................ACAACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------CA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................CAGCAACAACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
......C----------------------AACAACAGCAGC------AGC---------------------------------AGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................CAGCAACAACA---ACAAC------AGCA------G--------------------------------------------------------------------------------------------------------------------CA------GCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.....AC----------------------AACAACAGCAGC------AGC---------------------------------AGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
droGri2
AGCAG-C----------------------AGCAGCA---------GCAGC---------AGCAGCAGCAG------------CAGCAGCAGCAGCAGCAG------------------------------------CAGCAGCA---------GCAGCAGCAGCA---------GC--AG---------------CA------GCAGCAGCAGCAGCAGCA---------GCAGCAG------------------------CAGCA---------------------GC---A---GCAGCAGCAG---CAGCAG--------------C------AGC---AG------CAG---CAGCAGCAG---------C------------------------------AGCAG---CAGCAGCAGCAGCAGC---------------------------------------AGCAGCA------------------------GCAGCAGCA------GCAG---CA---------------------------------------------------GCAGCA--GCAG-------------CA---------------------------GCAGCAGCAGCAGCA--------GCAGTTAAAACAGCA------------------------------------GC---------A------GCATCAGCAGCAGCAAAAACAGCAGCAGCAACA------------GC---AGCATCAGC---------------A----------------------------------------------------------------------------------GC----A--GCAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GCA--ATGCTG--------------CAGCATC---A---------GCAAC---------AACAACAGCAG------------CAGCAACAACAGCATCAG------------------------------------CAACAGCA---------ACAGCAGCAACAATGGCA---GCAA-----------------CT------GCAGCA------GCAA------CAACAACAACAG------------------------CAGCAACA------------------AC---A---ACAGCAGCAG---CAACAA--------------CAGCA---------A------CAG---CAACAACAA------------CTGCAG------------------------------CAGCAACAACAAC------------------------------------------------------------------------------------------AG---CAGCA------GCAACAACAGCATCAG---------CA---------------ACAG--CAACAGCAGCA-------------------------------ACA------------ATGGCA--------GCA------------------------------------------------GCAACAACAGCA------ACATCAACTG------CAGCAGCAACAGCAACA------------GC---AGCAACAAT---------------G----------------------------------------------------------------------------------GC----A--GCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................AGCATC---A---------GCAAC---------AACAACAGCAG------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25100010
.........................CAGCATC---A---------GCAAC---------AACAACAGCAG------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25100010
.............................................................................................................................................................................................................................................................................................................................................................................................AG------------------------------CAGCAACAACAAC------------------------------------------------------------------------------------------AG---CA...............................................................................................................................................................................................................................................................................................................................................................................19200.20400040
............................CATC---A---------GCAAC---------AACAACAGCAG------------CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.20100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------------------------------------------------------------------------------------------AG---CAGCA------GCAACA................................................................................................................................................................................................................................................................................................................................................................18200.20400040
............................................................ACAACAGCAG------------CAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.20400040
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAG---------CA---------------ACAG--CAACAGCAGCA-------------------------------ACA------------AT...........................................................................................................................................................................................................................................................2660.17101000
................................................................................................TCAG------------------------------------CAACAGCA---------ACAGCAGCAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------------------------------------------------------------------AG---CAGCA------GCAACAACAGC...........................................................................................................................................................................................................................................................................................................................................................20200.15300030
...............................................................ACAGCAG------------CAGCAACAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15300030
........................................................................................................................................................................................................................................................................CAACA------------------AC---A---ACAGCAGCAG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200020
........................................................................................................................................................................................................................................................................CAACA------------------AC---A---ACAGCAGCAG---CAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
.........................................................................................................................................AACAGCA---------ACAGCAGCAACAATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
................................................................................................TCAG------------------------------------CAACAGCA---------ACAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.10100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA------------GC---AGCAACAAT---------------G----------------------------------------------------------------------------------G............23200.10202000
........................................................................................................................................................................................................................................................................CAACA------------------AC---A---ACAGCAGCAG---CAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200011
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------ACAG--CAACAGCAGCA-------------------------------ACA------------ATGG.........................................................................................................................................................................................................................................................23200.10202000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------ACAG--CAACAGCAGCA-------------------------------ACA------------ATGGC........................................................................................................................................................................................................................................................24200.10202000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA------------GC---AGCAACAAT---------------G----------------------------------------------------------------------------------GC----.......24200.10202000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAG---------CA---------------ACAG--CAACAGCAGCA-------------------------------ACA------------.............................................................................................................................................................................................................................................................24100.10100010
........................................................................................................................................................................................................................CAA------CAACAACAACAG------------------------CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10202000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA------------GC---AGCAACA.................................................................................................................18200.10200020
.......................................................................................................................................................................................................................................CAACAG------------------------CAGCAACA------------------AC---A---ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200020
.........................................................................................................................................AACAGCA---------ACAGCAGCAACAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCATCAG---------CA---------------ACAG--CAACAG................................................................................................................................................................................................................................................................................................................27120.08101000
.....................................................................................CAACAACAGCATCAG------------------------------------CAACAGCA---------ACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08101000
.............................................................CAACAGCAG------------CAGCAACAACAGCATCAG------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCATCAG---------CA---------------ACAG--CAACAGCAG.............................................................................................................................................................................................................................................................................................................27120.08100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------------------------------------------------------------------------------------AG---CAGCA------GCAACAACAGCATCAG---------.............................................................................................................................................................................................................................................................................................................................................27120.08100010
........................................................................................CAACAGCATCAG------------------------------------CAACAGCA---------ACAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
.....................................................................................CAACAACAGCATCAG------------------------------------CAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.07100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCATCAG---------CA---------------ACAG--C.....................................................................................................................................................................................................................................................................................................................22140.07100010
........................................................................................................................................................................................................................................................................................................................................................................AACAA------------CTGCAG------------------------------CAGCAACAACAAC------------------------------------------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................25150.07101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAG---------CA---------------ACAG--CAACAGCAG.............................................................................................................................................................................................................................................................................................................23170.06101000
............................................................................................AGCATCAG------------------------------------CAACAGCA---------ACAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
........................................................................................CAACAGCATCAG------------------------------------CAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.06100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCATCAG---------CA---------------ACAG--C.....................................................................................................................................................................................................................................................................................................................19170.06100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------CA---------------ACAG--CAACAGCAGCA-------------------------------AC..........................................................................................................................................................................................................................................................................24190.05101000
...............................................................................................ATCAG------------------------------------CAACAGCA---------ACAGCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.05101000
................................................................................................................................................................................................................A------GCAA------CAACAACAACAG------------------------CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................................................................................................AGCAGCAG---CAACAA--------------CAGCA---------A------CAG---CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100001
...........................................................................................................................................................................................................................................................................CA------------------AC---A---ACAGCAGCAG---CAACAA--------------CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............................................................ACAACAGCAG------------CAGCAACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
.......................................................................................................................................................................................................................................................................GCAACA------------------AC---A---ACAGCAGCAG---CAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...............................................................................................................................................................................................................................................................................................................................................................AG---CAACAACAA------------CTGCAG------------------------------CAGCAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------------GC---AGCAACAAT---------------G----------------------------------------------------------------------------------G............20200.05101000
.......................................................................................................................................................................................................................................................................................................................................................A------CAG---CAACAACAA------------CTGCAG------------------------------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......................................................................................................................................................................................................................................CAACAG------------------------CAGCAACA------------------AC---A---ACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
........................................................................................................................................CAACAGCA---------ACAGCAGCAACAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.............................................................................................................................................................................................................................................................................................................................................A---------A------CAG---CAACAACAA------------CTGCAG------------------------------CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--CAACAGCAGCA-------------------------------ACA------------ATGG.........................................................................................................................................................................................................................................................20200.05101000
..........................................................................................................................................................................................................................................................................................................AGCAGCAG---CAACAA--------------CAGCA---------A------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.............................................................................................................................................................................................................AGCA------GCAA------CAACAACAACAG------------------------CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...................................A---------GCAAC---------AACAACAGCAG------------CAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...............................................................................................................................................................................................................CA------GCAA------CAACAACAACAG------------------------CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.......................................................................................................................................................................................................................GCAA------CAACAACAACAG------------------------CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------------------------------------------------------------------------AG---CAGCA------GCAACAACAGCA..........................................................................................................................................................................................................................................................................................................................................................22200.05101000
..............................................................AACAGCAG------------CAGCAACAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------ACAG--CAACAGCAGCA-------------------------------ACA------------ATGGC........................................................................................................................................................................................................................................................25200.05101000
............................................................................................................................................................................................................................................G------------------------CAGCAACA------------------AC---A---ACAGCAGCAG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA------------GC---AGCAACAAT---------------G----------------------------------------------------------------------------------GC----.......25200.05101000
..............................................................................................CATCAG------------------------------------CAACAGCA---------ACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.........................................................................................................................................................................................................................................................................AACA------------------AC---A---ACAGCAGCAG---CAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
..............................................................................................................................................................................................................GCA------GCAA------CAACAACAACAG------------------------CAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.......................................................................................................................................................................................................................GCAA------CAACAACAACAG------------------------CAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
..........................................................................................................................................................................................................................................................................................................AGCAGCAG---CAACAA--------------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAG---------CA---------------ACAG--CAACAGCA..............................................................................................................................................................................................................................................................................................................20200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA------------GC---AGCAAC..................................................................................................................19200.05100010
....................................................................................................................................................................................................................................................................................................A---ACAGCAGCAG---CAACAA--------------CAGCA---------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------------------CAGCAACAACAAC------------------------------------------------------------------------------------------AG---CAGCA------G.....................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.....................................................................................................................................................................................................................................AACAACAG------------------------CAGCAACA------------------AC---A---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAAC------------------------------------------------------------------------------------------AG---CAGCA------GCAACA................................................................................................................................................................................................................................................................................................................................................................25200.05100010
......................................................................................................................................................................................................................................................................AGCAACA------------------AC---A---ACAGCAGCAG---CAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...............................................................................................................................................................................................................CA------GCAA------CAACAACAACAG------------------------CAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.............................................................................................................................................................................................................................................................................................................................................A---------A------CAG---CAACAACAA------------CTGCAG------------------------------CAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...............................................................................................................................................................................................................................................................................................................................................................AG---CAACAACAA------------CTGCAG------------------------------CAGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
....................................................................................................................................................................................................................................CAACAACAG------------------------CAGCAACA------------------AC---A---ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100001
...............................................................................................................................................................................................................................................................................................AC---A---ACAGCAGCAG---CAACAA--------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................................................................GCAGCAG---CAACAA--------------CAGCA---------A------CAG---CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
........................................................................................................................................................................................................................................AACAG------------------------CAGCAACA------------------AC---A---ACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
..................................................................................................................................................................................................................................AACAACAACAG------------------------CAGCAACA------------------AC---A---ACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...........................................................AACAACAGCAG------------CAGCAACAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
............................................................................................................................................................................................................................................................................................................................................CA---------A------CAG---CAACAACAA------------CTGCAG------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................................................................AGCA---------ACAGCAGCAACAATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.............................................................................................................................................................................................................AGCA------GCAA------CAACAACAACAG------------------------CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------------------------------------------------------------------------------------------AG---CAGCA------GCAACAA...............................................................................................................................................................................................................................................................................................................................................................19200.05100010
...............................................................................................ATCAG------------------------------------CAACAGCA---------ACAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------CA---------------ACAG--CAACAGCAGC............................................................................................................................................................................................................................................................................................................21200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................AACAACAA------------CTGCAG------------------------------CAGCAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
................................................................................................................................................................................................................A------GCAA------CAACAACAACAG------------------------CAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
............................................................................................................................................................................................................................................................................A------------------AC---A---ACAGCAGCAG---CAACAA--------------CAGCA---------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC------------------------------------------------------------------------------------------AG---CAGCA------GCAACAACAGCA..........................................................................................................................................................................................................................................................................................................................................................25200.05100010
dp5
AGCAA-CA----------------------TATGCA---------ACAGC---------AACATCTGCAG------------CAGCAACATCTGCAGCAG------------------------------------CAACATCT---------GCAGCAGCAACA---------GC--AGCAACAACAGAAGCA---------------------GCAGCA---------ACAGCAG------------------------CAGCA---------------------GC---A-----------------------------------GCAGGTGCAGCAGCAACATCAGCAA---CAGCAACAT------------------CA---------------GCAGCAACAG---------CAGCAAAAGC---------------------------------------AACATCA------------------------GCAGCAACA------GCAG---CA---------------------------------------------------GCAGCA--GCAA-------------CA---------------------------ACAGC-----------------------------------AACAACAGCAACATCAGCAACAAC---------------------------------------------------------AACA------------------------GCTGCAG------------C--CCCCACCAAGA------------------------------------CCCC---------CAATGACGCTCAGTGACATA----T--TCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA------GCAG---CA---------------------------------------------------GCAGC.......................................................................................................................................................................................................................................................................................................................20200.501001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCAGCAACAAC---------------------------------------------------------AACA------------------------GC...............................................................................................................2130.3310100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAACAAC---------------------------------------------------------AACA------------------------GC...............................................................................................................1960.1710010000000
....................................................................................................................................................................................CAACAACAGAAGCA---------------------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CA---------------------------------------------------GCAGCA--GCAA-------------CA---------------------------ACAGC-----------------------------------A.............................................................................................................................................................................................................................22200.1020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CA---------------------------------------------------GCAGCA--GCAA-------------CA---------------------------ACAGC-----------------------------------A.............................................................................................................................................................................................................................21200.1020100100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------AACATCA------------------------GCAGCAACA------GCAG---C................................................................................................................................................................................................................................................................................................................................................................................22110.0910010000000
.......................................................................................................................................................................................................................................................................................................................................................................CAACAT------------------CA---------------GCAGCAACAG---------CAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.0910010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA------------------------GCAGCAACA------GCAG---CA---------------------------------------------------GCAGC.......................................................................................................................................................................................................................................................................................................................24140.0710000100000
.......................................................................................................................................................................................................................GCAGCA---------ACAGCAG------------------------CAGCA---------------------GC---A-----------------------------------GCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.0710100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GCAGCAACA------GCAG---CA---------------------------------------------------GCAGCA--....................................................................................................................................................................................................................................................................................................................23200.0510001000000
............................................................................................................................................................................................................................A---------ACAGCAG------------------------CAGCA---------------------GC---A-----------------------------------GCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------GCAGCAACA------GCAG---CA---------------------------------------------------GCAGCA--G...................................................................................................................................................................................................................................................................................................................23200.0510100000000
.........................................................................................................................................................GCAGCAGCAACA---------GC--AGCAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------GCAG---CA---------------------------------------------------GCAGCA--G...................................................................................................................................................................................................................................................................................................................20200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--GCAA-------------CA---------------------------ACAGC-----------------------------------AACAACAG......................................................................................................................................................................................................................22200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCA------------------------GCAGCAACA------GCAG---C................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GCAGCAACA------GCAG---CA---------------------------------------------------GCA.........................................................................................................................................................................................................................................................................................................................20200.0510000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------GCAG---CA---------------------------------------------------GCAGCA--GCAA-------------CA---------------------------ACA...................................................................................................................................................................................................................................................................22200.0510000100000
...........................................................................................................................................................AGCAGCAACA---------GC--AGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA-------------CA---------------------------ACAGC-----------------------------------AACAACAGCAAC..................................................................................................................................................................................................................23200.0510100000000
.......................................................................................................................................................................................................................GCAGCA---------ACAGCAG------------------------CAGCA---------------------GC---A-----------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..........................................................................................................................................................................................................................................CAG------------------------CAGCA---------------------GC---A-----------------------------------GCAGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------GCAG---CA---------------------------------------------------GCAGCA--GCAA-------------CA---------------------------......................................................................................................................................................................................................................................................................20200.0510000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CA---------------------------------------------------GCAGCA--GCAA-------------CA---------------------------ACAGC-----------------------------------AA............................................................................................................................................................................................................................23200.0510000100000
...............................................................................................................................................................................................GCA---------------------GCAGCA---------ACAGCAG------------------------CAGCA---------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
..........................................................................................................................................................................................................................................................................................................................................................................CAT------------------CA---------------GCAGCAACAG---------CAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------GCAG---CA---------------------------------------------------GCAGCA--GCAA-------------CA---------------------------......................................................................................................................................................................................................................................................................19200.0510000010000
........................................................................................................................................................................................................................CAGCA---------ACAGCAG------------------------CAGCA---------------------G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
droPer2
GGTAG-CT-TG--------------CAGCAGCAACA---------CCAAT---------CGCAACAGCAG------------CAGCAATACCAGCAGCAG------------------------------------CACCAGCAACTGTTGACACAGCAGCAACTTTTGTC---GCAA-----------------CA------GCAACA------G---CA------------A-----GCAG------------------CAGCA---------------GCAGCAAT---A------TCCGCAG--------------------------CAGCAGCAGCAG------------------CAC------------TTC------------------CAGCAGCAGCAG---------CAGCAGCAGCAGCAACACTTGCAACAGCAACACGC---------------------------------------------ACAGCAGCA------GCAG---CA------GCAGCAGCATCA------------------------------------------------------------------------------------------------GTCGCA--------GCA------------------------------------------------GCAGCAACATTT------G---------------CC---------------------------AC---A------GCAGCAGCATCAGAT-------AACCGCACAAATTCAAACCATGAAGGATCAACCGCAACAG-----------------------------CCAATGGTGAG----T--AC-ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................GTTGACACAGCAGCAACTTTTGTC---GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004400000
....................................................................................................................................................................................................................................................................................................................................................GCAG------------------CAC------------TTC------------------CAGCAGCAGCAG---------CAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000
.............................................................CAACAGCAG------------CAGCAATACCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGATCAACCGCAACAG-----------------------------CCAATG................2811.001100000
.......................................................................................ATACCAGCAGCAG------------------------------------CACCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCATCA------------------------------------------------------------------------------------------------GTCGCA--------GCA------------------------------------------------GC..........................................................................................................................................................................................2011.001001000
....................................................................................................................................................................................................................................................................................................................................................GCAG------------------CAC------------TTC------------------CAGCAGCAGCAG---------CAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCA--------GCA------------------------------------------------GCAGCAACATTT------G---------------CC---------------------------AC---A------.................................................................................................................2511.001010000
................................AACA---------CCAAT---------CGCAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................................................................................................................................................................CTTTTGTC---GCAA-----------------CA------GCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG---------CAGCAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102002000
droAna3
AATCC-AGTAGCACCGCTCCAA---C---AGCAACAGCAGC------AACTCCAGC---AGCAGCAGCAG------------CCACAGCAACAGCAACAG------------------------------------CAGCAGCC---------ACACCATCAACA------GCAG--------------------C------------A------GACATC------CCAGCAACAGCAGCAGCATC------AAGCACAACAACAACA------------------TCAGCA------GCAGCAGCA---ATCACA--------------------------------------------------------AC---------------------------AACATAAGCAGCAACAGCAGCAGCA------------------------------------------CCAG------------CA---------------------------------------------------------------------------------------GCAG--CAACATCTTCA----------GCAGAAGCAGCAACAGCAGCAGCAAC-----------------------------------------ATCAACCAACACAGCA------------------GCAGC------------------------------------------AATCGCAGGC------AC---A------TCAGCAACTCCAGGCTCA----------------------------------------------------------------------------------TC----A--GCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................GC------AACTCCAGC---AGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.202200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCA------------------------------------------CCAG------------CA---------------------------------------------------------------------------------------GCA.........................................................................................................................................................................................................................................................................................................................2170.141100000
......................................AGC------AACTCCAGC---AGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141100000
...............................................AACTCCAGC---AGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101000100
................................................ACTCCAGC---AGCAGCAGCAG------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.091000001
......................................................................................................................................................................................................................................................................AACAACA------------------TCAGCA------GCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.081010000
........................................................................................CAACAGCAACAG------------------------------------CAGCAGCC---------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.081010000
...................CAA---C---AGCAACAGCAGC------AACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071100000
....................................................................................................................................................................................................................................CAGCAACAGCAGCAGCATC------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.061100000
.....................................................................................................................................................................................................................................AGCAACAGCAGCAGCATC------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.061000001
......................................................................................................................................................................................................................................GCAACAGCAGCAGCATC------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCAA........................................................................................................................................................................................................................................................................20200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAAC-----------------------------------------A.............................................................................................................................................................................................................................19200.051010000
....................................................................................................................................................................................................................................CAGCAACAGCAGCAGCATC------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
droBip1
GCA--AC----------------------ACCAGCA---GCAACAACAGC---------AGCAACATCAG------------CT---------GCAACAG------------------------------------CACCAGCA---------ACAGTTACAACACCA------GC--A------------GCAGCAGCA---ACAGCA------ACAG---------CACCTGCAC------------------------CAGCA---------------------AC---AGCTTCAGCCGCAC------CAG--------------C------AGC---AA------AT------------------GCAAC---------------------------ACCACCAGCAGCAACAACAGCAGCAGC------------------------------------------------------------------------------AACAGCACCAG---CAGCT------GCTGCACGAGTCCCAG---------C--------------------------------------------------------------------------------------------------------------AGCAACAGCAGCAGCAGTA---CCACCCACATCACCTACATCCGCACAGCCTG---------------CCGCACCAGCAACAGCA------------GC---AGCAGCAAC---------------A----------------------------------------------------------------------------------GC----A--GCAASizeHit CountTotal NormTotal
No Reads
droKik1
CA--------G--------------C---AACAGCA------ACTTCAAC---------AGCAGCAAATG------------CAGCAAGTTCAGCAGCAG------------------------------------CAACTTCA---------TCAGCAGCAACA---------G--------------------CAACT---TCAGCA------GCAT------CAACTTCAACAG------------------------CTGCAGCT------------------AC---T---CCAGAAGCAG---CAGCAACT-----------------------------------------------------GCAACAGCCA------------------C---------------------------------------AGCACCTGCAACAGCCACAAC---------------------------------------------------------AGCAGCAACAGAAACTCCAACAGGAACTACAG---------CAGCA------------GAA-----A----------------CA---------------------------GAAACTCCATCATCA--------GCAGTTACTCCAGCAGCAGAATCTG------------------------------------------------------------AAACAGCAGCAGGAGGT------------CC---AGCAGATGC---------------A----------------------------------------------------------------------------------TC----A--GCAASizeHit CountTotal NormTotal
No Reads
droFic1
AGCAA-C----------------------AGCAACA---------GCGAC---------AGGATCAGCAG------------CAGCAGCAACAGCAACAG------------------------------------GATCAGCA---------GCAGCAGCAACAACAACA---GCAA-----------------TC------GCAACA------GGAGTCGGGACAACAGCAACAG------------------------CAGCAGCAA------------------C---A---AAATCAGCAG---CAGCAGCAGC--------A---------------A------------------------------CAGGAT------------------C------------------------ATCAGC------------------------------AGCAGCAGCAACAACAACAACAATCGCAACAGCAACAGCAGCAG------------------------------------------------------CAGCAGCA------------------------------------------------------------------------ACAGCA--------GCA------------------------------------------------GCAAGAACAGAA------A---------------CC---------------------------ACAGCC---AAAGCAACAAC---------A----------------------------------------------------------------------------------ACTATGT--GTAASizeHit CountTotal NormTotal
No Reads
droEle1
ACCA--CTG----------------C---TGCAGCA---GCAGCAACAGC---------AGCAGCAAGAG------------CAACAGCAACAACAGCAG------------------------------------CAAGAGCA---------ACAGCAACAACA------GCAGCAA-----------------C---------A---------------------GCAGCAGCAG---------------------------------------------CA---GCAACA------ACAGCAG--------------------------CAACAACAACAG------------------CAG------------ACACAACAGCAGCAACAACAAC---AGCAGCAGCAGCAACAACAGCAGCA------------------------------------------------------GCCGCA---------------------------------------------GCAACAACAACCA------------------------------C--------------A----------GCCCGTGCA-----------------------------------------GCAAATCCATCAACCGCAACAACAGCAACAGCAGCA---AC---------------------------------------------------------ATGCGCTGCAAATGCAACAGCCACA---ACAAC------------A----------------------------------------------------------------------------------GC----C--ACAASizeHit CountTotal NormTotal
No Reads
droRho1
AACAG-C----------------------AGCAACA---------TCAGC---------AGCAACAGCAG------------CAGCAGCAACAGCAGCAG------------------------------------CAGCAGCA---------ACAGCAGCAGCAACA------G--------------------C------------A------G---CA-------------------------------------CAACAGCAGCA---GCCAC---------------A------GCAGCAG---CAGCAACT-----------GCAACTGCAGCAGCAA------------------------------------------------------------------------------------C------------------------------AGCAACTGCAACAGCAACAGCAACTGCAGCAGCAACAGCAAC---------------TG---------------------------------------CAGCAGCAACAGCAACACCAGGA--GCTC---------------------------------------------------------------------TACCGCC------AGCAGCAGCAACATC-------------------------------------------------------GCACTAGC---ATGAGTGGCA------------------------------------------------------------------------------------------------------TAGCCAGCCAGCAGCACT----T--GCAASizeHit CountTotal NormTotal
No Reads
droBia1
ATCAC-CACAGCCAC----------C---AGCAGCA---------GCAGC------AACAC---CAGCAA------------CAGCAGCAACAACAGCAG------------------------------------CAGCAGCA---------ACAGCAGCAGCACCA------G--------------------------------------------------------------------------------------CAGCAGCAACACGCCCAGCAGCTGCAGC---A------CC--------------------------AGCAGCTGCAGCAGCAG------------------CAC------------GTGCAG------------------CAGCAGCAA---------CACCAG------------------------------------------------------------CAGCAGCAACACCACCACCACCAGCAACACCAG---CAGCT------GCATCACGATCCG------------C--------------------------------------------------------------------------------------------------------------AGCAACAGCATCCGCAGTA---CCACCCGCACCAGCTGCACGCCCACGC--------------------------------------------------------------------------------------------------------------------------------------------------------------CCTG----C--CCACSizeHit CountTotal NormTotal
No Reads
droTak1
CCCAG-CGCAGCCACGCCCATTGTGC---AGCAGCA---------GCAGC---------AGCAGCAGCAG------------CAACAGCAACAGCAAGTG----------------GTG-----------------CAGCAGCA---------ACAGGTGCAACA---------GCAA-----------------GTGATTCCACA---------G---------------CAAGTGGTGCAACA---------A------GAACAGCAA------------------G---T------AGTGCAGCAGCAGCAACAGC--------A---------------A------------------------------GTAGTGCAG------------------------------------------CAGG------------------------------AGCAACAGCAAG------------------------------------------TGGTG---CAACA------GCAACAGGTGCAA--------------------------------------CAGCAACAGCAA----CA---------------------------GGTGCAACAGCAACA--------GCAGTACAGCC-------------AAC---------------------------------------------------------------------------------------------------AGAGCTAC---------GAGGCACCCGGATATC----T------------------------------------------------GCCA-CCCACTTCCGC----C--GCTCSizeHit CountTotal NormTotal
No Reads
droEug1
GCG--GCCCAA--------------CAGCAGC---A---------TCATC---------ATCATCAACAG------------CAGCAGCAACACCAACAG------------------------------------CAGCAGCA---------ACACCAGCAACA------TCAGCAG-----------------C------------A------G---CA---------------------------------------------------CGCCCAGCAGCTGCAAC---A------CC--------------------------AACAGCTGCAGCAGCAA------------------CAC------------GCC------------------CAGCAGCAACAT---------CAGCAGCAGC---------------------------------ATC---------------------------------ATCATCACCAGCAACACCAG---CAGCT------GCATCATGATCCC------------C--------------------------------------------------------------------------------------------------------------AGCAACAGCATCCGCAGTA---CCATCCCCACCAGCTGCATCCCCATTCTCTG---------------CC---------------------------CC---A------CCAGCAGC---------A----------------------------------------------------------------------------------AC----A--GCAASizeHit CountTotal NormTotal
No Reads
dm3
GCCGG-CCCAG--------------C---AGCAACT---------ACATC---------TCCATCAGCAG------------CAGCAGCAACAGCAACAG------------------------------------CAGCAGCA---------ACAGTCGCAGCACCA------GC--A------------ACAGCACCA---ACAGCA------G---CA---------------------------------------------------CGCCCAGCAACTGCAGC---A------CC--------------------------AACAGCTGCAGCAGCAA------------------CAC------------GCC------------------CAGCAGCATCAG---------CAGCAACAGC---------------------------------------ACC---------------------------ACCTCCACCAGCAGCACCAG---CAGCT------GCATCACGATCCG------------C--------------------------------------------------------------------------------------------------------------AGCAGCAGCATCCGCAGTA---CCATCCGCACCAGCTGCACGCCCATGCCCTG---------------CC---------------------------TC---A------CCAGCAGC---------A----------------------------------------------------------------------------------GC----A--GCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................CAGCA---------ACAGTCGCAGCACCA------GC--A------------AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAGCAACAG------------------------------------CAGCAGCA---------ACAGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2431.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000110000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCAGCAA------------------CAC------------GCC------------------CAGCAGCATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................A------CC--------------------------AACAGCTGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CAACAG------------------------------------CAGCAGCA---------ACAGTCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCACGCCCATGCCCTG---------------CC---------------------------T............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AACTGCAGC---A------CC--------------------------AACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AG--------------C---AGCAACT---------ACATC---------TCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AGCA---------ACAGTCGCAGCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AACAG------------------------------------CAGCAGCA---------ACAGTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................CAACAG------------------------------------CAGCAGCA---------ACAGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CAGCAACAGC---------------------------------------ACC---------------------------ACCT....................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AG------------------------------------CAGCAGCA---------ACAGTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................CAGCAACAG------------------------------------CAGCAGCA---------ACAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................................................................................................ACAG------------------------------------CAGCAGCA---------ACAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................CAACAGCAACAG------------------------------------CAGCAGCA---------ACAGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................GCAACAG------------------------------------CAGCAGCA---------ACAGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................AG------------------------------------CAGCAGCA---------ACAGTCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........................................................................................CAACAGCAACAG------------------------------------CAGCAGCA---------ACAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TCAGCAG------------CAGCAGCAACAGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ACAGCAACAG------------------------------------CAGCAGCA---------ACAGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................GCAACAGCAACAG------------------------------------CAGCAGCA---------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................C--A------------ACAGCACCA---ACAGCA------G---C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AGCAGCAACAGCAACAG------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................C---------TCCATCAGCAG------------CAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCATCAG---------CAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CCATCAGCAG------------CAGCAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---A------CCAGCAGC---------A----------------------------------------------------------------------------------GC----A--GCAA1980.1310000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAG---------CAGCAACAGC---------------------------------------ACC---------------------------AG......................................................................................................................................................................................................................................................................................................................................................................................................24100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ACAGCTGCAGCAGCAA------------------CA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GCAGCAACAGCAACAG------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAG---------CAGCAACAGC---------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................18110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CATCAGCAG------------CAGCAGCAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................AGCAGCAACAGCAACAG------------------------------------CAGCAGCA---------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AG------------------------------------CAGCAGCA---------ACAGTCGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.0510000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GCAACAG------------------------------------CAGCAGCA---------ACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AGCAG------------CAGCAGCAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................CAG------------CAGCAGCAACAGCAACAG------------------------------------CAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................G------------CAGCAGCAACAGCAACAG------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AACAGCAACAG------------------------------------CAGCAGCA---------AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...................................................................CAG------------CAGCAGCAACAGCAACAG------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---A------CCAGCAGC---------A----------------------------------------------------------------------------------GC----A--GCA.18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCCGC-CGTGGCCACG-----------GCAGC---A---------GTCG-------------CCCAACAG------------CAGCAGCAGCAGCAGCAG------------------------------------GCTGTCGT---------ACAGCAGCAACA------GCAGCAA-----------------G---------T-----------------------------------GG----CTGCCGCCGCCCAGCAGCAACA------------------CCAGCA------GCAGCAGCA---GCAACA-----------------------------------------------------ACAACAGGCC------------------G---------------------------------------TGCAGCAGCAACAGGCGGTCC---------------------------------------------------------AGCAGCAGCAGCAACATCAACAACAGCAG--------------------------------------CAGCAGCA----ACAACA---------------------------GC------------AAC--------A--------TGCCGCCGTAGCAGCCGCCGCAG---------------------------------------------------------------------------------------------CTGCCGC---------CTCGCATCCGCACATG--CATGCCGCTCATGCCCATGCCCA-C----------GCCCA---CG-CCCTTG--G-CCCACAATTGG----C--GCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG--------------------------------------CAGCAGCA----ACAAC..................................................................................................................................................................................................................................................................................................22204.0581000008100000000000
..CGC-CGTGGCCACG-----------GCAGC---A---------GTCG-------------CCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..................................................................................CAGCAGCAGCAGCAGCAG------------------------------------GCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----ACAACA---------------------------GC------------AAC--------A--------TGCCGCC.............................................................................................................................................................................................................................2011.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA----ACAACA---------------------------GC------------AAC--------A--------TGC.................................................................................................................................................................................................................................2011.00100000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACATCAACAACAGC...........................................................................................................................................................................................................................................................................................................................................................1940.25101000000000000000
...........................................................................................................................................................................................................................................................................CA------------------CCAGCA------GCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000001000000000
......................................................................................................................................................................................................................................................................AGCAACA------------------CCAGCA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
................................................................................................................................................................................................................................................................................................CAGCA------GCAGCAGCA---GCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010000000000000
droSec2
AGTGG-C----------------------GGCAACA---------GCAGC---------GGCGCAG---TCACCACCAGCAGAGGCAGCAGCAGCGACGC------------------------------------AGTCGCCA---------CTGGCAGCAGCA------GCAGCAG-----------------C------------G------G---CG------CAGTCACCACCAGCAGCAAC------AG------TAGCAGCGACGCAG------------TCACCA------CCAGCAGCA---ACAG--------------------------------------------------------CAGCG---A---CG---------CAGTT---GCCACCGGAAGCAGCAGCATCGGCGCG--------------------------GTC----------ACCAC------------C------------------------------AG---CAGCA------GCAGCCACGCAGTCAC---------C---------------------------------------------------------------------------ACCAACAGCA-----------------------------------GCAGCGACG---CAGTCACCTCCAGCAGCAACGGCGCAGTCAC---------------CA---------------------------CC---AGCAGCGGCAGCAG-------------------------------------------------------------------------------------CAGCGACGCG----G--GC-ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................GCAGCAGCA------GCAGCAG-----------------C------------G------G---C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC---------C---------------------------------------------------------------------------ACCAACAGCA-----------------------------------GCAGC...............................................................................................................................................................................................................19200.0510010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AGCAGCGGCAGCAG-------------------------------------------------------------------------------------CAGC.................19200.0510010
droYak3
GCA--GC----------------------AGCAGAA---------TCTGC---------ACAC------GCAGCAC------CAGCACAATCTGCAGGCG------------------------------------CAGCATCA---------GAGCCACTCGCA---------GT--TGCAGCAACACAGTCA---------------------GCAGCA---------AAGTCAG------------------------CAGCAGCA------------------ACAGCA------GCAGCAGCA---ACAACA--------------------------------GCAA---CAGCAGCAG------------------CAGCAGCAACAGCAAC---AGCAGCAGCAGCAACAACAGC---------------------------------------------AAC---------------------------------------------AGCAGCAACA------GCAGCA------------------------------------------------------------------------------------ACA------GC-----------------------------------AGCAACAACAACAGCAGCAACAGC------------------AGCA------G---------------TT---------------------------AC---A------GCTGCAGC--------------A--------------------------------------ACAAAATGATATCTTACTGCGCGAGGACA-TCGATGATATA----GACGCCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTACTGCGCGAGGACA-TCGATGAT..............2712.00201000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---AGCAGCAGCAGCAACAACAGC---------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................27201.2024000000000024
.........................................................................................................................................................................................................................................................................AGCA------------------ACAGCA------GCAGCAGCA---ACAACA--------------------------------GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27201.2024000000000024
............................................................................................................................................................CCACTCGCA---------GT--TGCAGCAACACAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................................................................................................CA---------GT--TGCAGCAACACAGTCA---------------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................ATCA---------GAGCCACTCGCA---------GT--TGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGC------------------AGCA------G---------------TT---------------------------.............................................................................................................................2230.33100000010000
...................................................................................................................................................................................................................................................................................................................A---ACAACA--------------------------------GCAA---CAGCAGCAG------------------CAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------------------------------------------------------------------------------ACA------GC-----------------------------------AGCAACAACAACAGCA..............................................................................................................................................................................................................25120.08101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAACAGC------------------....................................................................................................................................................................................22180.06100100000000
................................................................................................................................................................................................................................................................................................................AGCA---ACAACA--------------------------------GCAA---CAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
................................................................................................................................................................................................................................................................................................................................................................A---CAGCAGCAG------------------CAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AGCAGCAGCAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................G------------------CAGCAGCAACAGCAAC---AGCAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
..........................................................................................................................................................................................................................................................................GCA------------------ACAGCA------GCAGCAGCA---ACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGC---------------------------------------------AAC---------------------------------------------AGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................18200.05100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGC---------------------------------------------AAC---------------------------------------------AGCAGC................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------GC-----------------------------------AGCAACAACAACAGC...............................................................................................................................................................................................................20200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................................................GCAG------------------CAGCAGCAACAGCAAC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................GCAA---CAGCAGCAG------------------CAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001000000
............................................................................................................................................................................................................................................G------------------------CAGCAGCA------------------ACAGCA------GCAGCAGCA---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100001000000
.......................................................................................................................................................................................................................................................................................................................ACAACA--------------------------------GCAA---CAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA------GCAGCA------------------------------------------------------------------------------------ACA------GC-----------------------------------A.............................................................................................................................................................................................................................20200.05100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------------------------------------------------------------------------------ACA------GC-----------------------------------AGCAACAACAA...................................................................................................................................................................................................................20200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAAC---AGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC---------------------------------------------AAC---------------------------------------------AGCAGCAACA------G.....................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAGC------------------AGCA------..........................................................................................................................................................................20200.05100010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------GCAGCA------------------------------------------------------------------------------------ACA------GC-----------------------------------AGC...........................................................................................................................................................................................................................18200.05100010000000
droEre2
GCA--ACACAA-------------------CCAGCA---GCAGCATCAGC---------AGCAGCAGCAG------------CAGCATCAACAGCAGCAG------------------------------------CAGCAGCA---------ACAGCAGCAACA------GCAGCAA-----------------C---------AGCA------GCAG---------C------------------------------------A------------------------------------------------GCA--ACAACAGCAACAGCAGCAGCAGCAA------------------CAG---------------CAG------------------CAGCATCAA---------CAGCAACAGC------------------------------AGCAACA---------------------------------GCAACAGCAGC------AG---CAGTT------------GCAGCCACAACAGCAGCTGCAGCCGCA-----------------AC----------------------------------------------------AGCAGCA--------GCA------------------------------GTT---ACA------------------------------------------------------------------------------------GCTGCAG------------C--A--------------------------------------GCCAAATGATATTTTGCTGCGCGAGGATA-TCGATGACATA----GACGCCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-----------------AC----------------------------------------------------AGCAGCA--------GCA------------------------------GTT---ACA------------------------------------------------------------------------------------GCTGCA...........................................................................................................2711.0011000000
GCA--ACACAA-------------------CCAGCA---GCAGCATCAGC---------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---ACA------------------------------------------------------------------------------------GCTGCAG------------C--A--------------------------------------GCCAAATGAT..........................................2311.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACAGCAGCTGCAGCCGCA-----------------....................................................................................................................................................................................................................................................................................................................2211.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------------------GCAACAGCAGC------AG---CAGTT------------................................................................................................................................................................................................................................................................................................................................................................2220.5010001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------------------------GCAACAGCAGC------AG---CAGTT------------................................................................................................................................................................................................................................................................................................................................................................2120.5010000010
.............................................................................................................................................................................................................................................................................................................................................................................................AG------------------CAGCATCAA---------CAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000100
.....................................................................G------------CAGCATCAACAGCAGCAG------------------------------------CAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000
...........................................................................................................................................................................GCAGCAA-----------------C---------AGCA------GCAG---------C------------------------------------A------------------------------------------------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1531000020
.................................GCA---GCAGCATCAGC---------AGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1022000000
.................................................................................................................................................................AACA------GCAGCAA-----------------C---------AGCA------GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020002000
..........A-------------------CCAGCA---GCAGCATCAGC---------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000010
.............................................................................................................................................................CAGCAACA------GCAGCAA-----------------C---------AGCA------GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1021000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------------------GCAACAGCAGC------AG---C................................................................................................................................................................................................................................................................................................................................................................................18200.1020000020
..........................................................................................................................................................................................................................G---------C------------------------------------A------------------------------------------------GCA--ACAACAGCAACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810000010
...........................................................AGCAGCAGCAG------------CAGCATCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0811000000
.....................................................................................CATCAACAGCAGCAG------------------------------------CAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.0610001000
.........................................................................................................................................................................................................................................................................A------------------------------------------------GCA--ACAACAGCAACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.0610000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------GCAACAGCAGC------AG---CAGT.............................................................................................................................................................................................................................................................................................................................................................................18190.0511000000
..................................CA---GCAGCATCAGC---------AGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010
..........................................................................................................................................................................................................................................................................................................................GCA--ACAACAGCAACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000
..........................................................................................................................................GCAGCA---------ACAGCAGCAACA------GCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100
..............................................................................................................................................................AGCAACA------GCAGCAA-----------------C---------AGCA------GCAG---------C------------------------------------A------------------------------------------------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000000
..............................................................................................................................................................AGCAACA------GCAGCAA-----------------C---------AGCA------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC------------------------------AGCAACA---------------------------------GCA....................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100
...............................................................................................................................................................................................................................................................................................................................ACAACAGCAACAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
........................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCAA------------------CAG---------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
......................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAA------------------CAG---------------CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000010
.......................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAA------------------CAG---------------CAG------------------CA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510001000
......................................................................................ATCAACAGCAGCAG------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
................................................................................................GCAG------------------------------------CAGCAGCA---------ACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000
...........................................................................................................................................................AGCAGCAACA------GCAGCAA-----------------C---------AGCA------GCAG---------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000000
..............................................................................................................................................................................................................................................................................................................................................GCAGCAGCAA------------------CAG---------------CAG------------------CAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000
...........................................................................................................................................................................................................................................................................................................................CA--ACAACAGCAACAGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000
.............................................................................................................................................................................AGCAA-----------------C---------AGCA------GCAG---------C------------------------------------A------------------------------------------------GCA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
.....................................................................................CATCAACAGCAGCAG------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC------------------------------AGCAACA---------------------------------GCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000
..................................................................................................AG------------------------------------CAGCAGCA---------ACAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
..............................................................................................................................................................................................................................................................................................................................................GCAGCAGCAA------------------CAG---------------CAG------------------CAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
.......................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAA------------------CAG---------------CAG------------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000010
...........................................................................................................................................................................................................................................................................................................................CA--ACAACAGCAACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000
............................................................................................AGCAGCAG------------------------------------CAGCAGCA---------ACAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000
.......................................GCAGCATCAGC---------AGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
...........................................................................................................................................................................GCAGCAA-----------------C---------AGCA------GCAG---------C------------------------------------A------------------------------------------------GCA--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0511000000
...........................................CATCAGC---------AGCAGCAGCAG------------CAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510001000
..........................................GCATCAGC---------AGCAGCAGCAG------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..............................................................................................................................................................................GCAA-----------------C---------AGCA------GCAG---------C------------------------------------A------------------------------------------------GCA--ACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
...................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000
...........................................................................................................................................................................................................................................................................................................................CA--ACAACAGCAACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
..................................................................................................................................................................ACA------GCAGCAA-----------------C---------AGCA------GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000100
...........................................................................................................................................CAGCA---------ACAGCAGCAACA------GCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000
.........................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAA------------------CAG---------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
............................................................................................................................................................................CAGCAA-----------------C---------AGCA------GCAG---------C------------------------------------A------------------------------------------------GCA--AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000
................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510001000
.................................GCA---GCAGCATCAGC---------AGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000

Generated: 05/17/2015 at 10:13 PM