ID:

dmo_383

 Coordinate:

scaffold_5676:2478-2561 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.1 -37.1 -36.9 -36.5

Flybase annnotation

CDS [Dmoj\GI18321-cds]; exon [dmoj_GLEANR_3225:1]; CDS [Dmoj\GI18321-cds]; exon [dmoj_GLEANR_3225:2]; intron [Dmoj\GI18321-in]

No Repeatable elements found

mature
  1. scaffold_653:1239-1261 +
  2. scaffold_4149:1083-1105 +
  3. scaffold_4253:713-735 +
  4. dmo_383  scaffold_5676:2518-2540 +
  5. scaffold_5930:1515-1537 +
  6. scaffold_6339:30512-30534 -
  7. scaffold_6374:39971-39993 -
  8. scaffold_6417:45868-45890 -
  9. scaffold_6417:46069-46091 -
  10. scaffold_6417:51569-51591 -
  11. scaffold_6417:51770-51792 -
  12. scaffold_6433:1727-1749 +
  13. scaffold_6493:113425-113447 +
  14. scaffold_6493:113626-113648 +
  15. scaffold_6496:26542345-26542367 +
  16. scaffold_6496:26542546-26542568 +
  17. scaffold_6500:32279939-32279961 +
  18. scaffold_6500:32280395-32280417 +
  19. scaffold_6541:235388-235410 +
  20. scaffold_6541:649064-649086 +
star

Sense Strand Reads

##################################################------------------------------------------------------------------------------------##################################################
GGGCGACTCCGACGCCGTGGACGGCAAGCGAGGACGAAGAAGCTCCGGCGGTAGAAGTGGACGACAGATCCCCGTCACGGGGGTGGGAAGGCGGCAGGGAGCATTGTCCCTCCGTCGATGACCCCGCCCCGGAGACCTGGCGCGGGATGGAGCGGAGGAAGGGCGCAGTGATGTGTCGAGAAGT
**************************************************..................((.........((((((((..(((((.(((((......))))))))))......)))))))).)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
 V056
head
........................CAAGCGAGGACGAAGAAGCTCC.......................................................................................................................................... 22 0 10 0.90 9 8 1 0 0 0 0
........................CAAGCGAGGACGAAGAAGCTCCG......................................................................................................................................... 23 0 10 0.80 8 7 0 1 0 0 0
........................CAAGCGAGGACGAAGAAGCTCCGG........................................................................................................................................ 24 0 10 0.60 6 6 0 0 0 0 0
..........................................................................................GCGGCAGGGAGCATTGTCCCTCC....................................................................... 23 0 20 0.35 7 7 0 0 0 0 0
........................CAAGCGAGGACGAAGAAGCTCCGGC....................................................................................................................................... 25 0 7 0.29 2 2 0 0 0 0 0
.................................................................................................................................................................GGCGCAGTGATGTGTCGAGC... 20 1 5 0.20 1 1 0 0 0 0 0
.........................AAGCGAGGACGAAGAAGCTCCG......................................................................................................................................... 22 0 10 0.20 2 2 0 0 0 0 0
........................CAAGCGAGGACGAAGAAGCTC........................................................................................................................................... 21 0 10 0.20 2 2 0 0 0 0 0
........................CAAGCGAGGACGAAGAAGC............................................................................................................................................. 19 0 12 0.17 2 1 1 0 0 0 0
.............................GAGGACGAAGAAGCTCCGGC....................................................................................................................................... 20 0 7 0.14 1 1 0 0 0 0 0
............................CGAGGACGAAGAAGCTCCGGC....................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0 0
.........................AAGCGAGGACGAAGAAGCTCCGGCGG..................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0
............................CGAGGACGAAGAAGCTCCGGCGG..................................................................................................................................... 23 0 7 0.14 1 0 1 0 0 0 0
.........................AAGCGAGGACGAACAAGCTCCGG........................................................................................................................................ 23 1 10 0.10 1 1 0 0 0 0 0
........................CAAGCGAGGACGAAGAAGCTCCGT........................................................................................................................................ 24 1 10 0.10 1 0 1 0 0 0 0
...CGACTCCGACGCCGTGGACGG................................................................................................................................................................ 21 0 12 0.08 1 1 0 0 0 0 0
..............................................................................................CAGGGAGCATTGTCCCTCCGT..................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................GCGGCAGGGAGCATTGTCCCTCA....................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
..............................................................................GGGGGAGGGAAGGGGGCATGGAG................................................................................... 23 3 20 0.05 1 0 0 0 1 0 0
..........................................................................................GCGGCAGGGAGCATTGTCCCTCCGTC.................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
...................................................................................TGGGAAGGCGGCAGGGAGCATTGTCC........................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
.....................................................................CCTCGTCCAGGGGGTGGGA................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0
......................................................................................................ATTGTGCCTCCGTCGGTCA............................................................... 19 3 20 0.05 1 0 0 0 0 0 1
..........................................................................................GCGGCAGGGAGCATTGTCCCTCCG...................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................GCGGCAGGGAGCATTGTCCCTC........................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................GACCCCCCCCGGGAGACCA.............................................. 19 3 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

CCCGCTGAGGCTGCGGCACCTGCCGTTCGCTCCTGCTTCTTCGAGGCCGCCATCTTCACCTGCTGTCTAGGGGCAGTGCCCCCACCCTTCCGCCGTCCCTCGTAACAGGGAGGCAGCTACTGGGGCGGGGCCTCTGGACCGCGCCCTACCTCGCCTCCTTCCCGCGTCACTACACAGCTCTTCA
**************************************************..................((.........((((((((..(((((.(((((......))))))))))......)))))))).)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V056
head
 V049
head
........GGCTGCGGCACCTGCCGTTCGCTCCT...................................................................................................................................................... 26 0 11 2.55 28 23 1 2 1 1 0
.......AGGCTGCGGCACCTGCCGTTCGCTCCT...................................................................................................................................................... 27 0 11 1.18 13 13 0 0 0 0 0
.........GCTGCGGCACCTGCCGTTCGCTCCT...................................................................................................................................................... 25 0 11 0.82 9 8 1 0 0 0 0
...............................CCTGCTTCTTCGAGGCCGCCATCTT................................................................................................................................ 25 0 7 0.71 5 1 2 1 1 0 0
......GAGGCTGCGGCACCTGCCGTTCGCTCCT...................................................................................................................................................... 28 0 11 0.55 6 6 0 0 0 0 0
..........CTGCGGCACCTGCCGTTCGCTCCT...................................................................................................................................................... 24 0 11 0.36 4 4 0 0 0 0 0
............GCGGCACCTGCCGTTCGCTCCTGCTT.................................................................................................................................................. 26 0 11 0.27 3 3 0 0 0 0 0
...........TGCGGCACCTGCCGTTCGCTCCTGCTT.................................................................................................................................................. 27 0 11 0.27 3 3 0 0 0 0 0
.............CGGCACCTGCCGTTCGCTCCTGCTT.................................................................................................................................................. 25 0 11 0.27 3 2 1 0 0 0 0
..........................................................................AGTGCCCCCACCCTTCCGCCGTCCCT.................................................................................... 26 0 20 0.20 4 4 0 0 0 0 0
...........TGCGGCACCTGCCGTTCGCTCCT...................................................................................................................................................... 23 0 11 0.18 2 2 0 0 0 0 0
.........GCTGCGGCACCTGCCGTTCGCTCC....................................................................................................................................................... 24 0 11 0.18 2 1 1 0 0 0 0
..CGCTGAGGCTGCGGCACCTGCCGTT............................................................................................................................................................. 25 0 12 0.17 2 1 1 0 0 0 0
.............................................................................................CGTCCCTCGTAACAGGGAGGCAGCT.................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
...........TGCGGCACCTGCCGTTCGCTCCTGCT................................................................................................................................................... 26 0 11 0.09 1 1 0 0 0 0 0
........GGCTGCGGCACCTGCCGTTCGCTCCTC..................................................................................................................................................... 27 1 11 0.09 1 1 0 0 0 0 0
..............GGCACCTGCCGTTCGCTCCTGCGT.................................................................................................................................................. 24 1 11 0.09 1 0 1 0 0 0 0
..............CGCACCTGCCGGTCGTTCCTGCTT.................................................................................................................................................. 24 3 11 0.09 1 0 0 1 0 0 0
........GGCTGCGGCACCTGCCGTTCGCTCC....................................................................................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0
..............GGCACCTGCCGTTCGCTCCTGCTT.................................................................................................................................................. 24 0 11 0.09 1 1 0 0 0 0 0
.......TGGCTGCGGCACCTGCCGTTCGCTCCT...................................................................................................................................................... 27 1 11 0.09 1 1 0 0 0 0 0
...........AGCGGCACCTGCCGTTCGCTCCTGCTT.................................................................................................................................................. 27 1 11 0.09 1 1 0 0 0 0 0
............GCGGCACCTGCCGTTCGCTCCTG..................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0
............GCGGCACCTGCCGTTCGCTCCTGCTTCT................................................................................................................................................ 28 0 11 0.09 1 1 0 0 0 0 0
................CACCTGCCGTTCGCTCCTGCTTCT................................................................................................................................................ 24 0 11 0.09 1 1 0 0 0 0 0
..............GGCACCTGCCGTTCGCTCCTG..................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0
...........TGCGGCACCTGCCGTTCGCTCC....................................................................................................................................................... 22 0 11 0.09 1 1 0 0 0 0 0
........GGCTGCGGCCCCTGCCGTTCGCTCCT...................................................................................................................................................... 26 1 11 0.09 1 0 0 1 0 0 0
...............GCACCTGCCGTTCGCTCCTGCTTCT................................................................................................................................................ 25 0 11 0.09 1 1 0 0 0 0 0
......GAGGCTGCGGCACCTGCCGTTCGCT......................................................................................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0
..............GGCACCTGCCGTTCGCTCCTGCTTCT................................................................................................................................................ 26 0 11 0.09 1 1 0 0 0 0 0
........GGCTGCGGCACCTGGCGTTCGCTCCT...................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0 0
CCCGCTGAGGCTGCGGCACCTGCCGTT............................................................................................................................................................. 27 0 12 0.08 1 0 0 0 1 0 0
........GGCTGCGGCACCTGCCGTTCG........................................................................................................................................................... 21 0 12 0.08 1 0 0 0 0 0 1
............................................................................................................GGAGGCAGCTACTGGGGCGGGGCCT................................................... 25 0 12 0.08 1 1 0 0 0 0 0
.................................................................................................CCTCGTAACAGGGAGGCAGCTACT............................................................... 24 0 13 0.08 1 1 0 0 0 0 0
..............................................................CTGTCTAGGGGCAGTGCCCCCACCCT................................................................................................ 26 0 15 0.07 1 1 0 0 0 0 0
..................CCTGCCGTTCGCTCCTGCTTC................................................................................................................................................. 21 0 15 0.07 1 0 0 0 1 0 0
.....................GCCGTTCGCTCCTGCTTCT................................................................................................................................................ 19 0 15 0.07 1 1 0 0 0 0 0
................................................................GTCTAGGGGCAGTGCCCCCACCCT................................................................................................ 24 0 17 0.06 1 1 0 0 0 0 0
................................................................................CCCGCCCTTCCGCCGTCCCT.................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0
....................................................................................CCCTTCCGCCGTCCCTCGTAACAGG........................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..........................................................................CGTGCCCCCACCCTTCCGCCGTCCCT.................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................TCCGTCCCTCGTAACAGGGAGGCAGCT.................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
..............................................................................CCCCCACCCTTCCGCCGTCCCTC................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................CGCCGTCCCTCGTAACAGGGAGGCTGCT.................................................................. 28 1 20 0.05 1 0 1 0 0 0 0
.......................................................................GGCAGTGCCCCCACCCTTCCGCCGTCCCT.................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................CGCCGTCCCTCGTAACAGGGAGGCAGCT.................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
............................................................................TGCCCCCACCCTTCCGCCGTCCCT.................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
..............................................................................CCCCCACCCTTCCGCCGTCCCT.................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................TCCCGTCCCTCGTAACAGGGAGGCAGCT.................................................................. 28 2 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_5676:2428-2611 + dmo_383 GGGCGACTCCGACGCCGTGGACGGCAAGC---GAGGAC-----------------------GAAGAAGCT-------------------CCGGCGGTAGAAGTGGACGACAGATCCCCGTCACGGGGGTGGGAAGGCGGCAGGGAGCATTGTCCCTCCGTCGATGACCCCGCCCCGGAGACCTGGCGCGG-----GATGGAGCGGAGGAAGGGC------GC-AGTGATGTGTCGAGAAGT
droVir3 scaffold_13045:1167224-1167409 + GGC-AACCCCAA--CCGCGGCCGGCGAGATGGA-CGAGGAAGAGTCCGCACCGTTCGGAACGGAGGAGCACACACCACCAGCGCAGGACGTGGAGGCGGTAGGAGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------CGGAGACGCGGAGTCGCCACCTACGAAGGTGCCGAACGGCATCCGCGCAAACGACGGG-GAAGCAGA
droAna3 scaffold_13079:193747-193786 - AGC-GAC----------------------------GAC-----------------------GAAGGAGCA-------------------GCGGCGGCAGCAGAAGACGACA----------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453649:3241-3274 - CGGCGGCTTCGTCGGAGAGGCCGGAGAGC---GAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414092:9572-9630 - GGA-G--------------------------------------------------------------------------------------------------------------------------GGGAGGAGACGGCACAGAGAACTGTACCGCCAGCAACAACGGAGCCCCGGACATC-----------------------------------------------------------
droEre2 scaffold_4929:21632115-21632149 + ACACGCCACCACCGCCGACGCGGGGAAGG---AAGGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGGCGACTCCGACGCCGTGGACGGCAAGC---GAGGAC-----------------------GAAGAAGCT-------------------CCGGCGGTAGAAGTGGACGACAGATCCCCGTCACGGGGGTGGGAAGGCGGCAGGGAGCATTGTCCCTCCGTCGATGACCCCGCCCCGGAGACCTGGCGCGG-----GATGGAGCGGAGGAAGGGC------GC-AGTGATGTGTCGAGAAGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................CAAGC---GAGGAC-----------------------GAAGAAGCT-------------------CC......................................................................................................................................................22100.909800010
........................CAAGC---GAGGAC-----------------------GAAGAAGCT-------------------CCG.....................................................................................................................................................23100.808700001
........................CAAGC---GAGGAC-----------------------GAAGAAGCT-------------------CCGG....................................................................................................................................................24100.606600000
.......................................................................................................................................GCGGCAGGGAGCATTGTCCCTCC...................................................................................23200.357700000
........................CAAGC---GAGGAC-----------------------GAAGAAGCT-------------------CCGGC...................................................................................................................................................2570.292200000
...................................................................................................................................................................................................................GGC------GC-AGTGATGTGTCGAGC...2050.201100000
.........................AAGC---GAGGAC-----------------------GAAGAAGCT-------------------CCG.....................................................................................................................................................22100.202200000
........................CAAGC---GAGGAC-----------------------GAAGAAGCT-------------------C.......................................................................................................................................................21100.202200000
........................CAAGC---GAGGAC-----------------------GAAGAAGC............................................................................................................................................................................19120.172100010
................................GAGGAC-----------------------GAAGAAGCT-------------------CCGGC...................................................................................................................................................2070.141100000
............................C---GAGGAC-----------------------GAAGAAGCT-------------------CCGGC...................................................................................................................................................2170.141100000
.........................AAGC---GAGGAC-----------------------GAAGAAGCT-------------------CCGGCGG.................................................................................................................................................2670.141100000
............................C---GAGGAC-----------------------GAAGAAGCT-------------------CCGGCGG.................................................................................................................................................2370.141000010
........................CAAGC---GAGGAC-----------------------GAAGAAGCT-------------------CCGT....................................................................................................................................................24100.101000010
...CGACTCCGACGCCGTGGACGG.........................................................................................................................................................................................................................21120.081100000
...........................................................................................................................................CAGGGAGCATTGTCCCTCCGT.................................................................................21200.051100000
.......................................................................................................................................GCGGCAGGGAGCATTGTCCCTCA...................................................................................23200.051100000
.......................................................................................................................................GCGGCAGGGAGCATTGTCCCTCCGTC................................................................................26200.051100000
................................................................................................................................TGGGAAGGCGGCAGGGAGCATTGTCC.......................................................................................26200.051000010
.......................................................................................................................................GCGGCAGGGAGCATTGTCCCTCCG..................................................................................24200.051100000
.......................................................................................................................................GCGGCAGGGAGCATTGTCCCTC....................................................................................22200.051100000
droVir3
GGC-AACCCCAA--CCGCGGCCGGCGAGATGGA-CGAGGAAGAGTCCGCACCGTTCGGAACGGAGGAGCACACACCACCAGCGCAGGACGTGGAGGCGGTAGGAGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------CGGAGACGCGGAGTCGCCACCTACGAAGGTGCCGAACGGCATCCGCGCAAACGACGGG-GAAGCAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................AGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------...................................................................2133.009000000000050100000000001101000000000000000000000000000000000000
.......................................................................................................AGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------CG.................................................................2331.675000010000000000000000001003000000000000000000000000000000000000
...................................................................................................TAGGAGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------...................................................................2531.334000000000000000000000000000100000000102000000000000000000000000
...................................................................................................TAGGAGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------C..................................................................2631.003000020000000000000000000000000000000100000000000000000000000000
.......................................................................................................AGAAGAAA--------------------------------------TAT--CCCCGTCGG..............................................................................2030.672000000000000000000000001100000000000000000000000000000000000000
.......................................................................................................AGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------C..................................................................2230.672000000000000000000000001000100000000000000000000000000000000000
...................................................................................................TAGGAGAAGAAA--------------------------------------TAT--CCC....................................................................................1830.672000000000020000000000000000000000000000000000000000000000000000
...................................................................................................TAGGAGAAGAAA--------------------------------------TAT--CCCCGTCGG..............................................................................2430.672000000000000000000000000000000000000002000000000000000000000000
.......................................................................................................AGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------CGGAGA.............................................................2730.672000000000000100000000000000100000000000000000000000000000000000
.........................................................GAACGGAGGAGCACACACCA....................................................................................................................................................................20190.377000000000000000000000000000000001001500000000000000000000000000
................................................................................................CGGTAGGAGAAGAAA--------------------------------------TAT--CCCCGTCGG..............................................................................2730.331000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................AGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------CGGATT.............................................................2730.331000000000000000000000000000000000000100000000000000000000000000
................................................................................................CGGTAGGAGAAGAAA--------------------------------------TAT--CCCC...................................................................................2230.331000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................AGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------CGGA...............................................................2530.331000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................AGAAGAAA--------------------------------------TAT--CCCCGTCGGC----------T..................................................................2240.251000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GCGCAAACGACGGG-GAAGCAG.21200.204000020000000000000000000000000000000002000000000000000000000000
...........................................................................CACCAGCGCAGGACGTGGA...................................................................................................................................................19200.153000001000000000000000000001000000000000000000000000000000000010
......................................................................CACACCACCAGCGCAGGACGTGG....................................................................................................................................................23190.112000000000000000000000002000000000000000000000000000000000000000
.........................................................GAACGGAGGAGCACACACCAC...................................................................................................................................................................21190.112000000000000000000000000002000000000000000000000000000000000000
...........................................................................................................................................................................................................................CGCAAACGACGGG-GAAGCAGA21190.112000010000000000000000000000000000000001000000000000000000000000
.........................GAGATGGA-CGAGGAAGAGT....................................................................................................................................................................................................19200.102000000000000000000000000000000000000000000000000000000000000020
.................................................ACCGTTCGGAACGGAGGAG.............................................................................................................................................................................19200.102000000000000000000000002000000000000000000000000000000000000000
..........................................................................CCACCAGCGCAGGACGTGGAGGC................................................................................................................................................23200.102001000000000000000000000000000000000000000000000000000000000010
...........................................................................CACCAGCGCAGGACGTGG....................................................................................................................................................18200.102000010000010000000000000000000000000000000000000000000000000000
.................................................ACCGTTCGGAACGGAGGAGC............................................................................................................................................................................20200.102000000000000000000000001001000000000000000000000000000000000000
.................................................................................CGCAGGACGTGGAGGCGG..............................................................................................................................................18200.102000000000000000000000000000100000000001000000000000000000000000
...................................................................................................................................................................................................................GGCATCCGCGCAAACGACGGG-GAAGCA..27140.071001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TCCGCGCAAACGACGGG-GAAGCA..23140.071000010000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TGCCGAACGGCATCCGCGCAAACGAC............26140.071000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................CATCCGCGCAAACGACGGG-GA......21160.061000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................TCCGCGCAAACGACGGG-GAAG....21160.061000000000000000100000000000000000000000000000000000000000000000
.........................................................GAACGGAGGAGCACACACCACCA.................................................................................................................................................................23190.051000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................GCGCAAACGACGGG-GAAGCAGA22190.051000010000000000000000000000000000000000000000000000000000000000
.........................................................GAACGGAGGAGCACACACCACCAT................................................................................................................................................................24190.051000000000000000000000000000000000000100000000000000000000000000
.........................................................GAACGGAGGAGCACACACCACCAGC...............................................................................................................................................................25190.051000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................GCGCAAACGACGGG-GAAGC...19200.051000000000000000000000000000000000000001000000000000000000000000
..............CCGCGGCCGGCGAGATGGA-CGA............................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.........................................GAGTCCGCACCGTTCGGAACGG..................................................................................................................................................................................22200.051000000001000000000000000000000000000000000000000000000000000000
.................................................ACCGTTCGGAACGGAGGAGCACACAC......................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
................................................CACCGTTCGGAACGGAGGAGC............................................................................................................................................................................21200.051000000000010000000000000000000000000000000000000000000000000000
.......................................................................ACACCACCAGCGCAGGACGTG.....................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................GAGTCCGCACCGTTCGGAAC....................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................CGAGATGGA-CGAGGAAGAGT....................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
....AACCCCAA--CCGCGGCCGGCGAG.....................................................................................................................................................................................................................22200.051000000000000000000000100000000000000000000000000000000000000000
.............................TGGA-CGAGGAAGAGTCCGCACCGTTC.........................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................AT--CCCCGTCGGC----------CGGAGACGCGGA.......................................................24200.051000000000000000001000000000000000000000000000000000000000000000
..............................................................................CAGCGCAGGACGTGGAGGCGG..............................................................................................................................................21200.051000010000000000000000000000000000000000000000000000000000000000
................................A-CGAGGAAGAGTCCGCACCGTTCGGA......................................................................................................................................................................................26200.051000000000010000000000000000000000000000000000000000000000000000
.......................................................................ACACCACCAGCGCAGGACGTGGAGGC................................................................................................................................................26200.051000000000000000000000000000000010000000000000000000000000000000
...........................................................................CACCAGCGCAGGACGTGGAGGC................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
GGC-AACCCCAA--CCGCGGCCGGCGAGAT...................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000000010
..........................AGATGGA-CGAGGAAGAGTCCGC................................................................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
.................................................ACCGTTCGGAACGGAGGAGCAC..........................................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................GCGCAGGACGTGGAGGCGG..............................................................................................................................................19200.051000010000000000000000000000000000000000000000000000000000000000
..C-AACCCCAA--CCGCGGCCGGCGAG.....................................................................................................................................................................................................................23200.051000000000000000100000000000000000000000000000000000000000000000
..........................................................................CCACCAGCGCAGGACGTGGA...................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................GCGCAAACGACGGG-GAAGCAA.21200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................GGACGTGGAGGCGGTAGGAGAA......................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.GC-AACCCCAA--CCGCGGCCGGC........................................................................................................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
......................................GAAGAGTCCGCACCGTTCGGAAC....................................................................................................................................................................................23200.051000000000000000100000000000000000000000000000000000000000000000
..............................................................GAGGAGCACACACCACCAGC...............................................................................................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
.........CAA--CCGCGGCCGGCGAGATG..................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..............................GGA-CGAGGAAGAGTCCGCACCGT...........................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GTCGGC----------CGGAGACGCGGAGT.....................................................20200.051000000000000000000000000000000000000000000000000000000000000010
..............................................................................CAGCGCAGGACGTGGAGGCGT..............................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................GCGCAAACGACGGG-GAAGCA..20200.051000010000000000000000000000000000000000000000000000000000000000
............................................TCCGCACCGTTCGGAACGGAGGA..............................................................................................................................................................................23200.051000010000000000000000000000000000000000000000000000000000000000
GGC-AACCCCAA--CCGCGGCCGG.........................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.......................................AAGAGTCCGCACCGTTCGG.......................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.............................TGGA-CGAGGAAGAGTCCGCACCGTTCGGA......................................................................................................................................................................................29200.051000000010000000000000000000000000000000000000000000000000000000
....AACCCCAA--CCGCGGCCGGCGAGA....................................................................................................................................................................................................................23200.051000000000000000000100000000000000000000000000000000000000000000
...............................GA-CGAGGAAGAGTCCGCACCG............................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
......................GGCGAGATGGA-CGAGGAAGAGT....................................................................................................................................................................................................22200.051000000000100000000000000000000000000000000000000000000000000000
droAna3
AGC-GAC----------------------------GAC-----------------------GAAGGAGCA-------------------GCGGCGGCAGCAGAAGACGACA----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droFic1
CGGCGGCTTCGTCGGAGAGGCCGGAGAGC---GAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GGA-G--------------------------------------------------------------------------------------------------------------------------GGGAGGAGACGGCACAGAGAACTGTACCGCCAGCAACAACGGAGCCCCGGACATC-----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEre2
ACACGCCACCACCGCCGACGCGGGGAAGG---AAGGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/17/2015 at 10:11 PM