ID:

dmo_38

 Coordinate:

scaffold_6308:1309091-1309154 +

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-32.1 -32.1 -32.1

Flybase annnotation

intergenic

No Repeatable elements found

mature

star

  1. dmo_61  scaffold_6308:1308803-1308824 +
  2. dmo_38  scaffold_6308:1309091-1309112 +

Sense Strand Reads

ACTATATGTGCAATCAGTATATAGCAAAAATCTAAGTTAAATCATTTGTTTGCGAGCTATAACCTAGTGGAATACGTTTATTTATCGGTTTTAAGTAGGTTGTAGCTCGGTGACAAAATGCTTTACTTTGCAACAGGAAAATCGGGAAATCTAACATCGATATA

***********************************..((((.((((((((..((((((((((((((...(((..((.........))..)))...))))))))))))))..))).))))).))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M046

female body

 V041

embryo

 M060

embryo

 V056

head

 V049

head
...........................................................................................TAAGTAGGTTGTAGCTCGGTGA................................................... 22 0 1 1236.00 1236 1099 40 39 17 23 18
..................................................TGCGAGCTATAACCTAGTGGAA............................................................................................ 22 0 2 202.50 405 362 19 8 8 5 3
...........................................................................................TAAGTAGGTTGTAGCTCGGTG.................................................... 21 0 1 180.00 180 166 10 2 2 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGA................................................... 23 0 1 128.00 128 116 6 1 2 1 2
...........................................................................................TAAGTAGGTTGTAGCTCGGTGT................................................... 22 1 1 122.00 122 113 1 1 0 5 2
...........................................................................................TAAGTAGGTTGTAGCTCGG...................................................... 19 0 1 76.00 76 73 0 0 3 0 0
..................................................TGCGAGCTATAACCTAGTGGA............................................................................................. 21 0 4 46.25 185 155 16 0 6 5 3
..........................................................................................TTAAGTAGGTTGTAGCTCGG...................................................... 20 0 1 39.00 39 38 1 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGT..................................................... 20 0 1 32.00 32 30 1 0 0 0 1
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAA.................................................. 23 1 1 23.00 23 22 0 0 1 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAT.................................................. 23 1 1 21.00 21 20 0 1 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTG.................................................... 22 0 1 18.00 18 14 2 1 0 1 0
..........................................................................................TTAAGTAGGTTGTAGCTCG....................................................... 19 0 1 15.00 15 13 1 0 1 0 0
..................................................TGCGAGCTATAACCTAGTGGAAA........................................................................................... 23 1 2 13.50 27 22 3 0 1 1 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGT..................................................... 21 0 1 11.00 11 11 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAC............................................................................................ 22 1 4 7.25 29 27 0 0 2 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTT.................................................... 21 1 1 6.00 6 6 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTC.................................................. 23 1 1 6.00 6 6 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTTA................................................... 22 1 1 6.00 6 4 0 0 0 0 2
...........................................................................................TAAGTAGGTTGTAGCTCGGTGG................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAATACG........................................................................................ 26 0 2 5.50 11 10 0 0 0 0 1
...........................................................................................TAAGTAGGTTGTAGCTCGGGGA................................................... 22 1 1 5.00 5 3 1 0 1 0 0
............................................................................................AAGTAGGTTGTAGCTCGGTGA................................................... 21 0 1 5.00 5 1 4 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAAC........................................................................................... 23 1 2 5.00 10 9 1 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTTT................................................... 22 2 1 5.00 5 5 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGG.............................................................................................. 20 0 4 4.50 18 15 3 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGACC........................................................................................... 23 2 4 4.25 17 15 1 0 0 1 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAAA................................................. 24 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAG.................................................. 23 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGT................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTC.................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTATCTCGGTGA................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAATACGTT...................................................................................... 28 0 2 4.00 8 8 0 0 0 0 0
...........................................................................................TAAGTAGGCTGTAGCTCGGTGA................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCG....................................................... 18 0 1 4.00 4 3 1 0 0 0 0
...........................................................................................TGAGTAGGTTGTAGCTCGGTGA................................................... 22 1 1 3.00 3 1 0 0 2 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTA.................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCTGTGA................................................... 22 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTA.................................................. 23 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAC.................................................. 23 0 1 3.00 3 1 1 1 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTT.................................................. 23 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAGTGGGTTGTAGCTCGGTGA................................................... 22 1 1 3.00 3 2 0 0 0 0 1
.............................................................................................AGTAGGTTGTAGCTCGGTGA................................................... 20 0 1 3.00 3 2 0 0 1 0 0
..............................................................................................GTAGGTTGTAGCTCGGTGA................................................... 19 0 1 3.00 3 3 0 0 0 0 0
.............................................................................................AGTAGGTTGTAGCTCGGTG.................................................... 19 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGATC................................................. 24 2 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGTTTGTAGCTCGGTGA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TTCGAGCTATAACCTAGTGGAA............................................................................................ 22 1 2 2.00 4 0 0 0 4 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGCGA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGGTGTAGCTCGGTGA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGT...................................................... 19 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGAA.................................................. 24 1 1 2.00 2 1 0 0 0 1 0
...........................................................................................TAAGTAGGTTGTACCTCGGTGA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGA..................................................... 20 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTAG................................................... 23 2 1 2.00 2 2 0 0 0 0 0
...................................................GCGAGCTATAACCTAGTGGAA............................................................................................ 21 0 2 2.00 4 1 3 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTT.................................................... 22 1 1 2.00 2 1 0 0 0 1 0
..................................................TGCGAGCTATAACCTAGTGGAAAA.......................................................................................... 24 1 2 2.00 4 4 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGAG.................................................. 24 1 1 2.00 2 2 0 0 0 0 0
............................................................................................AAGTAGGTTGTAGCTCGGTG.................................................... 20 0 1 2.00 2 0 2 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTTT................................................. 24 3 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTTGGTGA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTG............................................................................................... 19 0 5 1.80 9 7 1 0 0 0 1
.................................................TTGCGAGCTATAACCTAGTGGAA............................................................................................ 23 0 2 1.50 3 3 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAACC.......................................................................................... 24 2 2 1.50 3 3 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAT............................................................................................ 22 1 4 1.50 6 6 0 0 0 0 0
.................................................TTGCGAGCTATAACCTAGTGGA............................................................................................. 22 0 4 1.25 5 4 0 0 0 1 0
..........................................................................................TTAAGTAGGTTGTAGCTAGGTGA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGATTGTAGCTCGGTG.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGAAGCTCGGTG.................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTTA................................................. 24 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGATA................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTTGCTCGGTGA................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTTTC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCCGTGT................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGATAA................................................ 25 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GAAGTAGGTTGTAGCTCGG...................................................... 19 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTTTAGCTCGGTGA................................................... 22 1 2 1.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAAAA................................................ 25 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTC.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTAAGGAGGTTGTAGCTCGGTGA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGAGCTATAACCTAGTGGAA............................................................................................ 22 1 2 1.00 2 1 0 0 1 0 0
..........................................................................................TTAAGTAGGTTGTATCTCGGT..................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGATG.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGACT................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAAG........................................................................................... 23 1 2 1.00 2 2 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGTCC................................................. 25 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TCAGTAGGTTGTAGCTCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAAG................................................. 24 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGAT.................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTGGGTTGTAGCTCGGTGAC.................................................. 23 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGATA................................................. 25 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTATAGCTCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAATTAGGTTGTAGCTCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTATCTCGGTGAT.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTCT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGATAT................................................ 25 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGCTGTAGCTCCGTG.................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TGAAGTAGGTTGTAGCTCGGTGA................................................... 23 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAGTACGTTGTAGCTCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGATC................................................. 25 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTTC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAATACGTC...................................................................................... 28 1 2 1.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGATGTAGCTCGGTGA................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCAGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTATCTCGGT..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGTCGA................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGATT................................................. 24 2 1 1.00 1 0 0 0 0 0 1
...........................................................................................TAATTAGGTTGTAGCTCGGTG.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTCTAGCTCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAACTCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TAGGTTGTAGCTCGGTGA................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TATGTAGGTTGTAGCTCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAAT................................................. 24 2 1 1.00 1 1 0 0 0 0 0
............................................................................................AAGTAGGTTGTAGCTCGGTGATC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TGCGAGCTATAGCCTAGTGGAA............................................................................................ 22 1 2 1.00 2 0 0 0 0 1 1
..........................................................................................CTAAGTAGGTTGTAGCTCGGTGA................................................... 23 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGAC.................................................. 24 0 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAGGAGGTTGTAGCTCGGTGC................................................... 22 2 1 1.00 1 0 0 0 0 1 0
...........................................................................................TAAGTAGGTTGTAGCTCTGTG.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCCCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTATGTTGTAGCTCGGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTTGAA............................................................................................ 22 1 2 1.00 2 2 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTTAT.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTGGGTTGTCGCTCGGTGG................................................... 22 3 1 1.00 1 0 0 0 0 0 1
...........................................................................................TAAGTAGGTTGTAGCTCTG...................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGTTAT................................................... 23 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGC................................................... 22 1 1 1.00 1 0 0 0 0 0 1
...........................................................................................TAAGTAAGTTGTAGCTCGGTGT................................................... 22 2 1 1.00 1 0 0 0 0 0 1
..................................................TGCGAGCTATAACCTAGTGGAAT........................................................................................... 23 0 2 1.00 2 1 1 0 0 0 0
...........................................................................................TAAGTAGGTTGGAGATAGGTGA................................................... 22 3 1 1.00 1 0 0 1 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTTGGTGAT.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGTT..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTATGTTGTAGCTCGGTG.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAATAG......................................................................................... 25 1 2 1.00 2 2 0 0 0 0 0
..........................................................................................TTAAGTATGTTGTAGCTCGG...................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGTTCGGTGAA.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCCGC..................................................... 21 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTTAA.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTATA................................................ 25 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGGTATT.................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..............................................TGTTTGCGAGCTATAACCTAG................................................................................................. 21 0 5 0.80 4 4 0 0 0 0 0
..............................................TGTTTGCGAGCTATAACCTAGTG............................................................................................... 23 0 5 0.60 3 2 0 1 0 0 0
..................................................TGCGAGCCATAACCTAGTGGAA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAGTATAT....................................................................................... 27 3 4 0.50 2 2 0 0 0 0 0
...................................................TCGAGCTATAACCTAGTGGAAA........................................................................................... 22 2 2 0.50 1 0 1 0 0 0 0
........................................................................TACGTTTATTTATCGGTTTTAAG..................................................................... 23 0 2 0.50 1 0 1 0 0 0 0
...........................................................................................TATCTAGGTTGTAGCTCGGTGA................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..................................................TGCCAGCTATAACCTAGTGGAA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGCTATAGCCTAGTGGAAAAA......................................................................................... 25 3 2 0.50 1 0 0 0 0 1 0
....................................................CGAGCTATAACCTAGTGGAA............................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0
..................................................TTCGAGCTATAACCTAGTGGA............................................................................................. 21 1 4 0.50 2 1 0 0 1 0 0
..................................................TGCGAGCTATAACCTAGTGGCA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAATAT......................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAAGT.......................................................................................... 24 2 2 0.50 1 0 0 0 0 0 1
..................................................TGCGAGCTATGACCTAGTGGAA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTATTGGAA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
...........................................................................................GAACTAGGTTGTAGCTCCGTGA................................................... 22 3 2 0.50 1 0 0 0 0 0 1
..................................................TTCGAGCTATAACCTAGTGGAAA........................................................................................... 23 2 2 0.50 1 0 0 0 1 0 0
...........................................................................................TAAGTAGGTTGTAGCTCTGA..................................................... 20 2 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAAAACC........................................................................................ 26 2 2 0.50 1 1 0 0 0 0 0
..................................................TGCGGGCTATAACCTAGTGGAA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTCGGCAT................................................... 23 3 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTATGGGAA............................................................................................ 22 2 2 0.50 1 0 0 0 0 0 1
...................................................GCGAGCTATAACCTAGTGGAAG........................................................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGAA..................................................... 20 2 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGTTATAACCTAGTGGAATACG........................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGATCTATAACCTAGTGGAA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGAATA.......................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0
........................................................................TACGTTTATTTATCGGTTTTAAGTAG.................................................................. 26 0 2 0.50 1 1 0 0 0 0 0
..................................................TGCTAGCTATAACCTAGTGGAA............................................................................................ 22 1 2 0.50 1 0 0 0 1 0 0
..................................................TGCGAGCTTTAACCTAGTGGAA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGATATAACCTAGCGGGA............................................................................................ 22 3 2 0.50 1 0 0 0 0 0 1
..................................................TGCGAGCTGTAACCTAGTGGAAT........................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
..................................................TGCGAGATATAACCTAGTGGAAA........................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
........................................................................TACGTTTATTTATCGGTTTTAAGTCC.................................................................. 26 2 2 0.50 1 1 0 0 0 0 0
..................ATATGGCAACAATCTAACTT.............................................................................................................................. 20 3 20 0.45 9 0 9 0 0 0 0
..............................................TGTTTGCGAGCTATAACCTAGTC............................................................................................... 23 1 5 0.40 2 2 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGTAATACG........................................................................................ 26 1 3 0.33 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGCAA............................................................................................ 22 1 3 0.33 1 0 0 0 0 0 1
..................................................TGCGAGCTATAACCTAGTGTAA............................................................................................ 22 1 3 0.33 1 1 0 0 0 0 0
........................................................................TACGTTTATTTATCGGTTTC........................................................................ 20 1 3 0.33 1 1 0 0 0 0 0
..................................................TACGAGCTATAACCTAGTGTAAAA.......................................................................................... 24 3 3 0.33 1 0 0 0 0 0 1
..................................................TGCGAGCTATAACCTAGTGGACA........................................................................................... 23 2 4 0.25 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGT............................................................................................. 21 1 4 0.25 1 1 0 0 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGAAT.................................................... 21 3 4 0.25 1 1 0 0 0 0 0
..................................................TGAGAGCTATAACCTAGTGGA............................................................................................. 21 1 4 0.25 1 0 0 0 1 0 0
..................................................TGCTAGCTATAACCTAGTGGA............................................................................................. 21 1 4 0.25 1 0 0 0 1 0 0
..................................................TGCGAGCTATAACCTAGTGGTC............................................................................................ 22 2 4 0.25 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGTTT........................................................................................... 23 2 4 0.25 1 1 0 0 0 0 0
.................................................TTGCGAGCTATAACCTAGTGG.............................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGACT........................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0
..................................................TGCGATCTATAACCTAGTGGA............................................................................................. 21 1 4 0.25 1 1 0 0 0 0 0
..................................................TACGAGCTATAACCTAGTGGA............................................................................................. 21 1 4 0.25 1 1 0 0 0 0 0
.................................................TTGCGAGCTATAACCTGGTGGA............................................................................................. 22 1 4 0.25 1 0 0 0 0 0 1
..................................................TGCGAGCTATAACCTAGTGGC............................................................................................. 21 1 4 0.25 1 1 0 0 0 0 0
..................................................TGCGAGCTTTAACCTAGTGGACC........................................................................................... 23 3 4 0.25 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTAGTGGATT........................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0
..................ATATGGCAACAATCTAACTTA............................................................................................................................. 21 3 14 0.21 3 1 2 0 0 0 0
..............................................TGTTTGCGAGCTATAACCTAGT................................................................................................ 22 0 5 0.20 1 0 0 0 1 0 0
..................................................TTCGAGCTATAACCTAGT................................................................................................ 18 1 5 0.20 1 0 0 0 1 0 0
...........................................................................................TAAGTAGGTTGTAGCTCGTGA.................................................... 21 3 5 0.20 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTGGAG............................................................................................... 19 2 5 0.20 1 1 0 0 0 0 0
..................................................TGCGAGCTATAACCTCGTGTA............................................................................................. 21 2 5 0.20 1 0 0 0 0 0 1
.................................................TTGCGAGCTATAACCTAGTG............................................................................................... 20 0 5 0.20 1 0 1 0 0 0 0
..........................................................................................TTAAGTAGGTTGTAGCTTA....................................................... 19 2 5 0.20 1 0 0 1 0 0 0
...........................................................................................TAAGTAGGTTGTAGCTGTGA..................................................... 20 3 11 0.09 1 0 1 0 0 0 0

Anti-sense strand reads

TGATATACACGTTAGTCATATATCGTTTTTAGATTCAATTTAGTAAACAAACGCTCGATATTGGATCACCTTATGCAAATAAATAGCCAAAATTCATCCAACATCGAGCCACTGTTTTACGAAATGAAACGTTGTCCTTTTAGCCCTTTAGATTGTAGCTATAT

************************************..((((.((((((((..((((((((((((((...(((..((.........))..)))...))))))))))))))..))).))))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total V056

head

 M046

female body

 V110

male body
..................TATACCGTTGTTAGATTGAAT............................................................................................................................. 21 3 14 0.29 4 1 2 1
..............................AGATTCAATTTGGTAAGC.................................................................................................................... 18 2 9 0.11 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6308:1309041-1309204 + dmo_38 confident ACTATATGTGCAATCAGTATATAGCAAAAATCTAAGTTAAATCATTTGTTTGCGAGCTATAACCTAGTGGAATACGTTTATTTATCGGTTTTAAGTAGGTTGTAGCTCGGTGACAAAATGCTTTACTTTGCAACAGGAAAATCGGGAAATCTAACATCGATATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACTATATGTGCAATCAGTATATAGCAAAAATCTAAGTTAAATCATTTGTTTGCGAGCTATAACCTAGTGGAATACGTTTATTTATCGGTTTTAAGTAGGTTGTAGCTCGGTGACAAAATGCTTTACTTTGCAACAGGAAAATCGGGAAATCTAACATCGATATASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...........................................................................................TAAGTAGGTTGTAGCTCGGTGA...................................................2211236.00123640391823171099
..................................................TGCGAGCTATAACCTAGTGGAA............................................................................................222202.50405198358362
...........................................................................................TAAGTAGGTTGTAGCTCGGTG....................................................211180.00180102002166
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGA...................................................231128.0012861212116
...........................................................................................TAAGTAGGTTGTAGCTCGGTGT...................................................221122.0012211250113
...........................................................................................TAAGTAGGTTGTAGCTCGG......................................................19176.00760000373
..................................................TGCGAGCTATAACCTAGTGGA.............................................................................................21446.25185160356155
..........................................................................................TTAAGTAGGTTGTAGCTCGG......................................................20139.00391000038
...........................................................................................TAAGTAGGTTGTAGCTCGGT.....................................................20132.00321010030
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAA..................................................23123.00230000122
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAT..................................................23121.00210100020
..........................................................................................TTAAGTAGGTTGTAGCTCGGTG....................................................22118.00182101014
..........................................................................................TTAAGTAGGTTGTAGCTCG.......................................................19115.00151000113
..................................................TGCGAGCTATAACCTAGTGGAAA...........................................................................................23213.50273001122
..........................................................................................TTAAGTAGGTTGTAGCTCGGT.....................................................21111.00110000011
..................................................TGCGAGCTATAACCTAGTGGAC............................................................................................2247.25290000227
...........................................................................................TAAGTAGGTTGTAGCTCGGTT....................................................2116.006000006
...........................................................................................TAAGTAGGTTGTAGCTCGGTGG...................................................2216.006000006
..................................................TGCGAGCTATAACCTAGTGGAATACG........................................................................................2625.50110010010
............................................................................................AAGTAGGTTGTAGCTCGGTGA...................................................2115.005400001
..................................................TGCGAGCTATAACCTAGTGGAAC...........................................................................................2325.0010100009
...........................................................................................TAAGTAGGTTGTAGCTCGGTTT...................................................2215.005000005
..................................................TGCGAGCTATAACCTAGTGG..............................................................................................2044.50183000015
..................................................TGCGAGCTATAACCTAGTGGACC...........................................................................................2344.25171001015
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAG..................................................2314.004000004
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGT...................................................2314.004000004
..........................................................................................TTAAGTAGGTTGTAGCTCGGTC....................................................2214.004000004
..................................................TGCGAGCTATAACCTAGTGGAATACGTT......................................................................................2824.008000008
...........................................................................................TAAGTAGGTTGTAGCTCG.......................................................1814.004100003
...........................................................................................TAAGTAGGTTGTAGCTCGGTA....................................................2113.003000003
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTA..................................................2313.003000003
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAC..................................................2313.003110001
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTT..................................................2313.003000003
.............................................................................................AGTAGGTTGTAGCTCGGTGA...................................................2013.003000012
..............................................................................................GTAGGTTGTAGCTCGGTGA...................................................1913.003000003
.............................................................................................AGTAGGTTGTAGCTCGGTG....................................................1912.002000002
...........................................................................................TAAGTAGGTTGTAGCTCGGTGATC.................................................2412.002000002
...........................................................................................TAAGTAGGTTGTAGCTCGGTAT...................................................2212.002000002
...........................................................................................TAAGTAGGTTGTAGCTCGT......................................................1912.002000002
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGAA..................................................2412.002000101
...........................................................................................TAAGTAGGTTGTAGCTCGGA.....................................................2012.002000002
..........................................................................................TTAAGTAGGTTGTAGCTCGGTAG...................................................2312.002000002
...................................................GCGAGCTATAACCTAGTGGAA............................................................................................2122.004300001
..........................................................................................TTAAGTAGGTTGTAGCTCGGTT....................................................2212.002000101
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGAG..................................................2412.002000002
............................................................................................AAGTAGGTTGTAGCTCGGTG....................................................2012.002200000
...........................................................................................TAAGTAGGTTGTAGCTCGGTGTTT.................................................2412.002000002
..................................................TGCGAGCTATAACCTAGTG...............................................................................................1951.809101007
.................................................TTGCGAGCTATAACCTAGTGGAA............................................................................................2321.503000003
..................................................TGCGAGCTATAACCTAGTGGAACC..........................................................................................2421.503000003
..................................................TGCGAGCTATAACCTAGTGGAT............................................................................................2241.506000006
.................................................TTGCGAGCTATAACCTAGTGGA.............................................................................................2241.255000104
...........................................................................................TAAGTAGGTTGTAGCTCGGTC....................................................2111.001000001
...........................................................................................TAAGTAGGTTGTAGCTCGGTGACT.................................................2411.001000001
..................................................TGCGAGCTATAACCTAGTGGAAG...........................................................................................2321.002000002
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAAG.................................................2411.001000001
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGAT..................................................2411.001000001
...........................................................................................TAAGTAGGTTGTAGCTCGGTCT...................................................2211.001000001
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGATC.................................................2511.001000001
...........................................................................................TAAGTAGGTTGTAGCTCGGTTC...................................................2211.001000001
..................................................TGCGAGCTATAACCTAGTGGAATACGTC......................................................................................2821.002000002
...........................................................................................TAAGTAGGTTGTAGCTCGGTGATT.................................................2411.001001000
...............................................................................................TAGGTTGTAGCTCGGTGA...................................................1811.001000001
...........................................................................................TAAGTAGGTTGTAGCTCGGTGAAT.................................................2411.001000001
............................................................................................AAGTAGGTTGTAGCTCGGTGATC.................................................2311.001000001
..........................................................................................TTAAGTAGGTTGTAGCTCGGTGAC..................................................2411.001000010
...........................................................................................TAAGTAGGTTGTAGCTCGGTGC...................................................2211.001001000
..................................................TGCGAGCTATAACCTAGTGGAAT...........................................................................................2321.002100001
..................................................TGCGAGCTATAACCTAGTGGAATAG.........................................................................................2521.002000002
...........................................................................................TAAGTAGGTTGTAGCTCGGTATT..................................................2311.001000001
..............................................TGTTTGCGAGCTATAACCTAG.................................................................................................2150.804000004
..............................................TGTTTGCGAGCTATAACCTAGTG...............................................................................................2350.603010002
........................................................................TACGTTTATTTATCGGTTTTAAG.....................................................................2320.501100000
....................................................CGAGCTATAACCTAGTGGAA............................................................................................2020.501000001
..................................................TGCGAGCTATAACCTAGTGGAATAT.........................................................................................2520.501000001
..................................................TGCGAGCTATAACCTAGTGGAAGT..........................................................................................2420.501001000
..........................................................................................TTAAGTAGGTTGTAGCTCGGCAT...................................................2320.501000001
...................................................GCGAGCTATAACCTAGTGGAAG...........................................................................................2220.501100000
...........................................................................................TAAGTAGGTTGTAGCTCGAA.....................................................2020.501000001
..................................................TGCGAGCTATAACCTAGTGGAATA..........................................................................................2420.501010000
........................................................................TACGTTTATTTATCGGTTTTAAGTAG..................................................................2620.501000001
........................................................................TACGTTTATTTATCGGTTTTAAGTCC..................................................................2620.501000001
..............................................TGTTTGCGAGCTATAACCTAGTC...............................................................................................2350.402000002
........................................................................TACGTTTATTTATCGGTTTC........................................................................2030.331000001
..................................................TGCGAGCTATAACCTAGTGGACA...........................................................................................2340.251000001
..................................................TGCGAGCTATAACCTAGTGGT.............................................................................................2140.251000001
...........................................................................................TAAGTAGGTTGTAGCTCGAAT....................................................2140.251000001
..................................................TGCGAGCTATAACCTAGTGGTC............................................................................................2240.251000001
.................................................TTGCGAGCTATAACCTAGTGG..............................................................................................2140.251000001
..................................................TGCGAGCTATAACCTAGTGGC.............................................................................................2140.251000001
..............................................TGTTTGCGAGCTATAACCTAGT................................................................................................2250.201000010
...........................................................................................TAAGTAGGTTGTAGCTCGTGA....................................................2150.201000001
.................................................TTGCGAGCTATAACCTAGTG...............................................................................................2050.201100000
..........................................................................................TTAAGTAGGTTGTAGCTTA.......................................................1950.201010000

Generated: 10/20/2015 at 07:30 PM