ID:

dmo_37

 Coordinate:

scaffold_6308:1300635-1300700 +

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

antisense_to_intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-33.2 -33.2 -33.1

Flybase annnotation

Antisense to intron [Dmoj\GI10984-in]

No Repeatable elements found

Sense Strand Reads

TATATTATTGTGAATCATATATATTTATATATCTAATTGGTGTCTTTTGAGCTTTGCCCAGAAGATCTCACTAATTTGTTTTAGATTTCGTTATTGAGATATTCTGAGCAAGCATAAAAGGCTGCCACCAGCAACAGCTGATACAAAGAGAGTTTTCCCGAGTGGT

***********************************..((((((((((((.((((.((.(((((.((((((.((((..............)))).)))))).))))).)))))).)))))))).))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M046

female body

 M060

embryo

 V056

head

 V049

head

 V041

embryo
..............................................................................................TGAGATATTCTGAGCAAGCAT................................................... 21 0 1 864.00 864 796 38 12 15 3 0
.............................................................................................TTGAGATATTCTGAGCAAGCAT................................................... 22 0 1 829.00 829 733 43 31 14 5 3
..............................................................................................TGAGATATTCTGAGCAAGCATT.................................................. 22 1 1 290.00 290 268 13 4 5 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCA.................................................... 21 0 1 164.00 164 158 5 0 1 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTC................................................. 23 2 1 129.00 129 122 6 0 1 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATC.................................................. 22 1 1 126.00 126 121 4 0 1 0 0
..................................................GCTTTGCCCAGAAGATCTCACT.............................................................................................. 22 0 1 98.00 98 90 2 2 2 1 1
..............................................................................................TGAGATATTCTGAGCAAGCA.................................................... 20 0 1 89.00 89 79 9 0 0 1 0
.............................................................................................TTGAGATATTCTGAGCAAGC..................................................... 20 0 1 83.00 83 81 0 0 0 2 0
.............................................................................................TTGAGATATTCTGAGCAAGCATC.................................................. 23 1 1 71.00 71 68 1 1 1 0 0
.............................................................................................TTGAGATATTCTGAGCAAG...................................................... 19 0 1 42.00 42 41 1 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATA.................................................. 22 0 1 40.00 40 36 3 1 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATG.................................................. 22 1 1 30.00 30 26 2 0 1 1 0
..................................................GCTTTGCCCAGAAGATCTCAC............................................................................................... 21 0 1 21.00 21 21 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTT................................................. 23 2 1 21.00 21 21 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATT.................................................. 23 1 1 19.00 19 18 0 0 1 0 0
..................................................GCTTTGCCCAGAAGATCTCACTC............................................................................................. 23 1 1 15.00 15 13 2 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGC..................................................... 19 0 1 12.00 12 10 2 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGT..................................................... 20 1 1 9.00 9 8 1 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCAA................................................... 22 1 1 9.00 9 9 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATAA................................................. 23 0 1 7.00 7 7 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCAC................................................... 21 1 1 6.00 6 3 0 3 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCAA................................................... 21 1 1 6.00 6 6 0 0 0 0 0
..............................................................................................TTAGATATTCTGAGCAAGCAT................................................... 21 1 1 6.00 6 3 0 3 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTCT................................................ 24 3 1 5.00 5 5 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATA.................................................. 23 0 1 5.00 5 5 0 0 0 0 0
.............................................................................................TGGAGATATTCTGAGCAAGCAT................................................... 22 1 1 5.00 5 0 0 5 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATTT................................................. 24 2 1 5.00 5 5 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATCT................................................. 24 2 1 5.00 5 5 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTCC................................................ 24 3 1 5.00 5 5 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATCC................................................. 23 2 1 5.00 5 5 0 0 0 0 0
..................................................GCTTTGCCCAGAAGATCTCA................................................................................................ 20 0 1 5.00 5 5 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTA................................................. 23 1 1 4.00 4 4 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATTC................................................. 24 2 1 4.00 4 3 1 0 0 0 0
...............................................................................................GAGATATTCTGAGCAAGCAT................................................... 20 0 1 4.00 4 1 3 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATAA................................................. 24 0 1 3.00 3 3 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATCC................................................. 24 2 1 3.00 3 3 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCAG................................................... 21 1 1 3.00 3 3 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGT..................................................... 19 1 1 3.00 3 3 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAACCAT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAATCAT................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGA..................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAGGCAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATTA................................................. 24 1 1 2.00 2 1 1 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTG................................................. 23 2 2 2.00 4 4 0 0 0 0 0
.............................................................................................TTTAGATATTCTGAGCAAGCAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTGAGATATTCTGACCAAGCAT................................................... 22 1 1 2.00 2 1 0 1 0 0 0
..................................................GCTTTGCCCAGAAGATCTCACTA............................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTGTGATATTCTGAGCAAGCAT................................................... 22 1 1 2.00 2 1 0 1 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGAAT................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTGAGATGTTCTGAGCAAGCA.................................................... 21 1 1 2.00 2 1 0 0 1 0 0
..............................................................................................TAAGATATTCTGAGCAAGCAT................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTCAGATATTCTGAGCAAGCAT................................................... 22 1 1 2.00 2 1 0 1 0 0 0
...................................................CTTTGCCCAGAAGATCTCACT.............................................................................................. 21 0 1 2.00 2 0 1 0 0 1 0
..............................................................................................TGAGATATTCTGAGCAAGCATGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATG.................................................. 23 1 1 2.00 2 2 0 0 0 0 0
....................................................TTTGCCCAGAAGATCTCACTA............................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCAC................................................... 22 1 1 2.00 2 1 0 1 0 0 0
.............................................................................................TTGAGATATTCTGAGCAATCAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..............................................................................................TGACATATTCTGAGCAAGCATC.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..............................................................................................TGAGATGTTCTGAGCAAGCAT................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..............................................................................................TGGGATATTCTGAGCAAGCAT................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGTAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTTT................................................ 24 3 1 2.00 2 2 0 0 0 0 0
............................................................................................ATTGAGATATTCTGAGCAAGCA.................................................... 22 0 1 2.00 2 1 1 0 0 0 0
..............................................................................................TGAGATATTCTGAGTAAGCATT.................................................. 22 2 2 1.50 3 3 0 0 0 0 0
..................................................GCTTTGCACAGAAGATCTCACT.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGGTATTCTGAGCAAGCA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAT...................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................GCTTTGCCCATAAGATCTCACTC............................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGATATATTCTGAGCAAGCAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................GAGATATTCTGAGCAAGCATC.................................................. 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................................................TTGAGATATTATGAGCAAGC..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTATGAGCAAGCATC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................AGCTTTGCCCAGAAGATCTCAC............................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................TTGAGATATTCTGAACAAGCAAA.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...................................................CTTTGCCCAGAAGATCTCACTA............................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCGAGCATC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATAT................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAATCAC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAACAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATTAT................................................ 25 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAATCATTC................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGGATATTCTGAGCAAGC..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAGGCAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCATGCAT................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.............................................................................................TGGAGATATTCTGAGCAAGCAC................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................................................TTGAGATATTCTGAACAAGCAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGATCAAGCATTTAA............................................... 25 3 1 1.00 1 1 0 0 0 0 0
..................................................GCTTTGCCCAGAAGATCTC................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................TCAGATATTCTGAGCAAGCAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGTATTAT................................................ 25 3 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCCT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTATGAGCAAGCAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCAAA.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAA....................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGACATTCTGAGCAATCAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGAGATTCTGAGCAAGCAT................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..........................................................................TTTGTTTTAGATTTCGTTAT........................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGATCAAGCATT.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATAGGAA.............................................. 27 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................TATTGAGATATTCTGAGCAAGCAT................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTTAA............................................... 25 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCGT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TTAGATATTCTGAGCAAGCAA................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGGTATTCTGAGCAAGCAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................GAGATATTCTGAGCAAGCA.................................................... 19 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................GATATTCTGAGCAAGCATTA................................................. 20 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGTAAGCA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGAGATTCTGCGCAAGCATT.................................................. 22 3 1 1.00 1 0 0 0 0 1 0
.............................................................................................TTGAGATATTCTGAGCAAGCAAT.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTATTGAGATATTCTGAGCAAG...................................................... 22 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATAAAAAAA............................................ 28 3 1 1.00 1 0 1 0 0 0 0
.............................................................................................TTGAGATACTCTGAGCAAGCATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGATATATTCTGAGCAAGCATC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAATCA.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TGGATATTCTGAGCAAGCAT................................................... 20 2 1 1.00 1 0 0 1 0 0 0
..................................................GCTTTGCCCAGAAGATCTCATT.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTCAGCAAGCAT................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................TGAGATATTCTGATCAAGCAT................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................TTGCCCAGAAGATCTCACT.............................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................TGAGATATTCTGCGCAAGCATT.................................................. 22 2 1 1.00 1 0 0 0 1 0 0
.............................................................................................TTGAGATATTCTGAGCATGCAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGGTATTCTGAGCAAGCATT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TATTGAGATATTCTGAGCAA....................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................TGGAGATATTCTGAGCAAGC..................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGAGATATTCCGAGCAAGCAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGTAAGCAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGTA.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCAGT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGATCAAGC..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTATGAGCAAGCA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCGGAGCAAGCAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TTAGATATTCTGAGCAAGCATT.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATTCA................................................ 24 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCGT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTTAGCAAGCAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................GATATTCTGAGCAAGCATTC................................................. 20 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................GAGATATTCTGAGCAAGCATAA................................................. 22 0 1 1.00 1 0 1 0 0 0 0
................................................................................................AGATATTCTGAGCAAGCAT................................................... 19 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATCA................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...................................................CTTTGCCCAGAAGATCTCACTC............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAACATT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..................................................GCTTTGCCCAGAAGATCTCAA............................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATGTTCTGAGCAAGCA.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCAG................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATCCTGAGCAAGCATC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATAT................................................. 24 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGATCAAGCAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAACATC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTTAGCAAGCATT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGCGATATTCTGAGCAAGCAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................CGAGATATTCTGAGCAAGCAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
........................................................................AATTTGTTTTAGATTTAGTTAT........................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATAATCTGAGCAAGCAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGATATATTCTGAGCAAGCA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGGGCAAG...................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCATAC................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..................................................GCTTTGCCCAGAAGATCTCGCT.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCACGCAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCACT.................................................. 22 2 2 0.50 1 1 0 0 0 0 0
........................................TGTCTTTTGGGCTTTGCC............................................................................................................ 18 1 2 0.50 1 0 0 1 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGTT.................................................... 21 2 2 0.50 1 1 0 0 0 0 0
.............................................................................................TGGAGATATTCGGAGCAATCAT................................................... 22 3 2 0.50 1 0 0 0 0 1 0
.............................................................................................TTGAGATATTCTGAGCAAGCT.................................................... 21 1 2 0.50 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGCAAGCATTG................................................. 24 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGAAAGCATC.................................................. 22 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGATCAAGCATC.................................................. 22 2 2 0.50 1 1 0 0 0 0 0
.............................................................................................TTGAGATATTCTGAGTAAG...................................................... 19 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAATT..................................................... 19 2 3 0.33 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAGCGTTCA................................................ 24 3 3 0.33 1 1 0 0 0 0 0
..............................ATCTAACTGGTGTTTTTTG..................................................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAAAA..................................................... 19 2 7 0.29 2 2 0 0 0 0 0
...............................................................................................TTGATATTCTGAGCAAGCAT................................................... 20 2 4 0.25 1 1 0 0 0 0 0
..................................................................................................ATATTCTGAGCAAGCATCC................................................. 19 2 5 0.20 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCATC...................................................... 18 2 8 0.13 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCATT...................................................... 18 2 10 0.10 1 1 0 0 0 0 0
..............................................................................................TGAGATATTCTGAGCAATGT.................................................... 20 3 11 0.09 1 1 0 0 0 0 0

Anti-sense strand reads

ATATAATAACACTTAGTATATATAAATATATAGATTAACCACAGAAAACTCGAAACGGGTCTTCTAGAGTGATTAAACAAAATCTAAAGCAATAACTCTATAAGACTCGTTCGTATTTTCCGACGGTGGTCGTTGTCGACTATGTTTCTCTCAAAAGGGCTCACCA

************************************..((((((((((((.((((.((.(((((.((((((.((((..............)))).)))))).))))).)))))).)))))))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M046

female body

 V049

head
..............................................................................................................................TGGTTGGTGTGGACTATGT..................... 19 3 20 0.55 11 6 4 1
..............................................................................................................................TGGTAGGTGTGGACTATGT..................... 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6308:1300585-1300750 + dmo_37 confident TATATTATTGTGAATCATATATATTTATATATCTAATTGGTGTCTTTTGAGCTTTGCCCAGAAGATCTCACTAATTTGTTTTAGATTTCGTTATTGAGATATTCTGAGCAAGCATAAAAGGCTGCCACCAGCAACAGCTGATACAAAGAGAGTTTTCCCGAGTGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TATATTATTGTGAATCATATATATTTATATATCTAATTGGTGTCTTTTGAGCTTTGCCCAGAAGATCTCACTAATTTGTTTTAGATTTCGTTATTGAGATATTCTGAGCAAGCATAAAAGGCTGCCACCAGCAACAGCTGATACAAAGAGAGTTTTCCCGAGTGGTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..............................................................................................TGAGATATTCTGAGCAAGCAT...................................................211864.0086438031512796
.............................................................................................TTGAGATATTCTGAGCAAGCAT...................................................221829.0082943351431733
..............................................................................................TGAGATATTCTGAGCAAGCATT..................................................221290.00290130054268
.............................................................................................TTGAGATATTCTGAGCAAGCA....................................................211164.0016450010158
..............................................................................................TGAGATATTCTGAGCAAGCATTC.................................................231129.0012960010122
..............................................................................................TGAGATATTCTGAGCAAGCATC..................................................221126.0012640010121
..................................................GCTTTGCCCAGAAGATCTCACT..............................................................................................22198.00982112290
..............................................................................................TGAGATATTCTGAGCAAGCA....................................................20189.00899010079
.............................................................................................TTGAGATATTCTGAGCAAGC.....................................................20183.00830020081
.............................................................................................TTGAGATATTCTGAGCAAGCATC..................................................23171.00711001168
.............................................................................................TTGAGATATTCTGAGCAAG......................................................19142.00421000041
..............................................................................................TGAGATATTCTGAGCAAGCATA..................................................22140.00403000136
..............................................................................................TGAGATATTCTGAGCAAGCATG..................................................22130.00302011026
..................................................GCTTTGCCCAGAAGATCTCAC...............................................................................................21121.00210000021
..............................................................................................TGAGATATTCTGAGCAAGCATTT.................................................23121.00210000021
.............................................................................................TTGAGATATTCTGAGCAAGCATT..................................................23119.00190001018
..................................................GCTTTGCCCAGAAGATCTCACTC.............................................................................................23115.00152000013
..............................................................................................TGAGATATTCTGAGCAAGC.....................................................19112.00122000010
.............................................................................................TTGAGATATTCTGAGCAAGT.....................................................2019.009100008
.............................................................................................TTGAGATATTCTGAGCAAGCAA...................................................2219.009000009
..............................................................................................TGAGATATTCTGAGCAAGCATAA.................................................2317.007000007
..............................................................................................TGAGATATTCTGAGCAAGCAC...................................................2116.006000033
..............................................................................................TGAGATATTCTGAGCAAGCAA...................................................2116.006000006
..............................................................................................TGAGATATTCTGAGCAAGCATTCT................................................2415.005000005
.............................................................................................TTGAGATATTCTGAGCAAGCATA..................................................2315.005000005
.............................................................................................TTGAGATATTCTGAGCAAGCATTT.................................................2415.005000005
.............................................................................................TTGAGATATTCTGAGCAAGCATCT.................................................2415.005000005
..............................................................................................TGAGATATTCTGAGCAAGCATTCC................................................2415.005000005
..............................................................................................TGAGATATTCTGAGCAAGCATCC.................................................2315.005000005
..................................................GCTTTGCCCAGAAGATCTCA................................................................................................2015.005000005
.............................................................................................TTGAGATATTCTGAGCAAGCATTC.................................................2414.004100003
...............................................................................................GAGATATTCTGAGCAAGCAT...................................................2014.004300001
.............................................................................................TTGAGATATTCTGAGCAAGCATAA.................................................2413.003000003
.............................................................................................TTGAGATATTCTGAGCAAGCATCC.................................................2413.003000003
..............................................................................................TGAGATATTCTGAGCAAGCAG...................................................2113.003000003
..............................................................................................TGAGATATTCTGAGCAAGT.....................................................1913.003000003
.............................................................................................TTGAGATATTCTGAGCAAGA.....................................................2012.002000002
..............................................................................................TGAGATATTCTGAGCAAGCATTG.................................................2322.004000004
..................................................GCTTTGCCCAGAAGATCTCACTA.............................................................................................2312.002000002
...................................................CTTTGCCCAGAAGATCTCACT..............................................................................................2112.002101000
..............................................................................................TGAGATATTCTGAGCAAGCATGT.................................................2312.002000002
.............................................................................................TTGAGATATTCTGAGCAAGCATG..................................................2312.002000002
....................................................TTTGCCCAGAAGATCTCACTA.............................................................................................2112.002200000
.............................................................................................TTGAGATATTCTGAGCAAGCAC...................................................2212.002000011
..............................................................................................TGAGATATTCTGAGCAAGCATTTT................................................2412.002000002
............................................................................................ATTGAGATATTCTGAGCAAGCA....................................................2212.002100001
.............................................................................................TTGAGATATTCTGAGCAAT......................................................1911.001000001
...............................................................................................GAGATATTCTGAGCAAGCATC..................................................2111.001000010
.................................................AGCTTTGCCCAGAAGATCTCAC...............................................................................................2211.001100000
...................................................CTTTGCCCAGAAGATCTCACTA.............................................................................................2211.001000001
..............................................................................................TGAGATATTCTGAGCAAGCATAT.................................................2311.001000001
..................................................GCTTTGCCCAGAAGATCTC.................................................................................................1911.001000001
.............................................................................................TTGAGATATTCTGAGCAA.......................................................1811.001000001
..........................................................................TTTGTTTTAGATTTCGTTAT........................................................................2011.001000001
...........................................................................................TATTGAGATATTCTGAGCAAGCAT...................................................2411.001000001
...............................................................................................GAGATATTCTGAGCAAGCA....................................................1911.001100000
.............................................................................................TTGAGATATTCTGAGCAAGCAAT..................................................2311.001000001
..........................................................................................TTATTGAGATATTCTGAGCAAG......................................................2211.001100000
..............................................................................................TGAGATATTCTGAGCAAGCATAAAAAAA............................................2811.001100000
.....................................................TTGCCCAGAAGATCTCACT..............................................................................................1911.001100000
...........................................................................................TATTGAGATATTCTGAGCAA.......................................................2011.001000001
..............................................................................................TGAGATATTCTGAGCAAGCAGT..................................................2211.001000001
.................................................................................................GATATTCTGAGCAAGCATTC.................................................2011.001100000
...............................................................................................GAGATATTCTGAGCAAGCATAA.................................................2211.001100000
................................................................................................AGATATTCTGAGCAAGCAT...................................................1911.001100000
...................................................CTTTGCCCAGAAGATCTCACTC.............................................................................................2211.001000001
..................................................GCTTTGCCCAGAAGATCTCAA...............................................................................................2111.001000001
.............................................................................................TTGAGATATTCTGAGCAAGCAG...................................................2211.001000001
.............................................................................................TTGAGATATTCTGAGCAAGCATAT.................................................2411.001000001
..............................................................................................TGAGATATTCTGAGCAAGCATAC.................................................2311.001000001
..............................................................................................TGAGATATTCTGAGCAAGCACT..................................................2220.501000001
.............................................................................................TTGAGATATTCTGAGCAAGTT....................................................2120.501000001
.............................................................................................TTGAGATATTCTGAGCAAGCT....................................................2120.501000001
.............................................................................................TTGAGATATTCTGAGCAAGCATTG.................................................2420.501000001
..............................................................................................TGAGATATTCTGAGCAATT.....................................................1930.331000001
..............................................................................................TGAGATATTCTGAGCAAAA.....................................................1970.292000002
..................................................................................................ATATTCTGAGCAAGCATCC.................................................1950.201000001
..............................................................................................TGAGATATTCTGAGCATC......................................................1880.131000001
..............................................................................................TGAGATATTCTGAGCATT......................................................18100.101000001
..............................................................................................TGAGATATTCTGAGCAATGT....................................................20110.091000001

Generated: 10/20/2015 at 06:46 PM