ID:

dmo_367

 Coordinate:

scaffold_4485:40798-41062 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.2 -17.1 -16.8 -16.7

Flybase annnotation

CDS [Dmoj\GI11945-cds]; CDS [Dmoj\GI11945-cds]; exon [dmoj_GLEANR_120:3]; exon [dmoj_GLEANR_120:4]; intron [Dmoj\GI11945-in]

Repeatable elements

NameClassFamilyStrand
Gypsy11-I_Dpse-intLTRGypsy-
mature
  1. scaffold_1990:8470-8493 +
  2. dmo_367  scaffold_4485:40984-41007 -
  3. scaffold_5560:1052-1075 +
  4. scaffold_6381:32201-32224 -
  5. scaffold_6477:9824-9847 +
  6. scaffold_6498:2175058-2175081 -
star
  1. scaffold_1990:8437-8460 +
  2. dmo_367  scaffold_4485:41017-41040 -
  3. scaffold_5560:1019-1042 +
  4. scaffold_5889:9511-9534 -
  5. scaffold_6381:32234-32257 -
  6. scaffold_6473:16271747-16271770 +
  7. scaffold_6477:9791-9814 +

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CACGGTATGATGGGCCATACAAGGTCGTCAGCTTCGTATCCACGAACATCGTAAGACTGCAACGGCTAGGCACAAGACAGCGGAGGACGGCCAACGTGGCTGACCTAAAGGAGTTCCACGAAGTCCCCGGAGACGCGGAGAACCAGGATACGAACGCCAGGATAGCTTAAGGGGCGGGAAACTACTTACCTTGTATTAATCTTAGGACACACGAGCTACGCATAAGGCACTATAGGCAAACATTAGGCAAAGCGCAGGCATTAGGTAGCAGTCTTCCCTTGTTCTCACTAATATTACGGTTAAAACACCCCACAGCAGCAGCCTCGACGTACGCGCTGGAGGGACGGCAACCGTTGGGCGGCCCA
************************************************************************........((..((((......(((((....((....))....)))))..)))).))******************************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
.......................................................................................CGGCCAACGTGACTAACCT................................................................................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0
.......................................................................................................................................................................................................TCATAAGACACACGCGCTAC.................................................................................................................................................. 20 3 8 0.38 3 0 3 0
...........................................GAACATCGTAAGACTGCAACGGCTA......................................................................................................................................................................................................................................................................................................... 25 0 3 0.33 1 0 0 1
.......................................................................................................................................................................................................TCATAGGACACACGCGCTAT.................................................................................................................................................. 20 3 3 0.33 1 0 1 0
.......................................................................................................CAGACAGGAGTTCCACGAAGTCCCCG............................................................................................................................................................................................................................................ 26 3 3 0.33 1 1 0 0
..................................................................................................................................................................................................................................................................................................................................CTCGACGTACGCGCTGGA......................... 18 0 6 0.33 2 2 0 0
..................................................................................................................................................................................................................................................................................................................................................TAGGGACTGCAACCGTTGTG....... 20 3 4 0.25 1 0 0 1
......................................................................................................................................................................................................ATCATAAGACACACGCGCTAC.................................................................................................................................................. 21 3 4 0.25 1 0 1 0
.............................................................................................................................................................................................................................................................................................................................GCAGCCTCGACGTACGCGCTG........................... 21 0 6 0.17 1 1 0 0
.........................................................................................................TAAAGGAGTTCCACGAAGTCCCCG............................................................................................................................................................................................................................................ 24 0 6 0.17 1 1 0 0
.................................................................................................................................................................................................................................................................................................................................CCTCGACGTACGCGCTGGA......................... 19 0 6 0.17 1 1 0 0
........................................................................CAAGACAGCGGAGGACGGCCAACG............................................................................................................................................................................................................................................................................. 24 0 7 0.14 1 0 1 0
..................................................................................................................................................................................................................................................................................................TTATTAGGGTTAAAACACCA....................................................... 20 3 7 0.14 1 0 1 0
....................................................................................................................................................TACGAACGCCAGGATAGC....................................................................................................................................................................................................... 18 0 7 0.14 1 1 0 0
.....................................................................GCACAAGACAGCGGAGGACGGC.................................................................................................................................................................................................................................................................................. 22 0 10 0.10 1 1 0 0
.......................................................................................................................................................................................................TCATAAGACACACGTGCTAC.................................................................................................................................................. 20 3 11 0.09 1 0 1 0
...........................................................................................................................................TTACCAGGAGACGAACGCCA.............................................................................................................................................................................................................. 20 3 15 0.07 1 0 0 1

Anti-sense strand reads

GTGCCATACTACCCGGTATGTTCCAGCAGTCGAAGCATAGGTGCTTGTAGCATTCTGACGTTGCCGATCCGTGTTCTGTCGCCTCCTGCCGGTTGCACCGACTGGATTTCCTCAAGGTGCTTCAGGGGCCTCTGCGCCTCTTGGTCCTATGCTTGCGGTCCTATCGAATTCCCCGCCCTTTGATGAATGGAACATAATTAGAATCCTGTGTGCTCGATGCGTATTCCGTGATATCCGTTTGTAATCCGTTTCGCGTCCGTAATCCATCGTCAGAAGGGAACAAGAGTGATTATAATGCCAATTTTGTGGGGTGTCGTCGTCGGAGCTGCATGCGCGACCTCCCTGCCGTTGGCAACCCGCCGGGT
********************************************************************************************************************************************************************************************************************************************........((..((((......(((((....((....))....)))))..)))).))************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
 V049
head
................................................................................................................................................................................................................................................GTAATCCGTTTCGCGTCCGTAATCCAT.................................................................................................. 27 0 6 3.33 20 19 1 0 0 0
.................................................................................................................................................................................................................................................TAATCCGTTTCGCGTCCGTAATCCAT.................................................................................................. 26 0 6 2.33 14 13 1 0 0 0
.......................................................................................................................................................................................................................GATGCGTATGCCCTGATA.................................................................................................................................... 18 2 3 1.00 3 3 0 0 0 0
...................................................................................................................................................................................................................................................ATCCGTTTCGCGTCCGTAATCCAT.................................................................................................. 24 0 6 1.00 6 5 1 0 0 0
..................................................................................................................................................................................................................................................AATCCGTTTCGCGTCCGTAATCCAT.................................................................................................. 25 0 6 0.83 5 5 0 0 0 0
...............................................................................................................................................................................................................................................TGTAATCCGTTTCGCGTCCGTAATCCAT.................................................................................................. 28 0 6 0.67 4 4 0 0 0 0
....................................................................................................................................................................................................................................................TCCGTTTCGCGTCCGTAATCCAT.................................................................................................. 23 0 6 0.50 3 1 2 0 0 0
..............................................................................................................................................GGTCCTATGCTTGCGGTCCTATCGAAT.................................................................................................................................................................................................... 27 0 5 0.40 2 0 0 2 0 0
.......................................................................................................................................................................................................................GATGCGTATGCCCTGATAG................................................................................................................................... 19 3 20 0.35 7 4 0 3 0 0
.....................................................................................................................................................................................................................................................CCGTTTCGCGTCCGTAATCCAT.................................................................................................. 22 0 6 0.33 2 0 2 0 0 0
....................................................................................................................................................................................TGATGAATGGAACATAATTAGAAT................................................................................................................................................................. 24 0 3 0.33 1 0 0 1 0 0
.......................................................................................................................................................................................................................................................GTTTCGCGTCCGTAATCCAT.................................................................................................. 20 0 6 0.33 2 2 0 0 0 0
..................................................................................................................................................CTATGCTTGCGGTCCTATCGAATT................................................................................................................................................................................................... 24 0 7 0.29 2 1 1 0 0 0
................................................................................................................................CCTCTGCGCCTCTTGGTCCTATGCT.................................................................................................................................................................................................................... 25 0 4 0.25 1 0 0 1 0 0
.......................................................................................................................................................................................................................GATGCGTATGCCCTGATAGC.................................................................................................................................. 20 3 4 0.25 1 1 0 0 0 0
...............................................................................................................................................GTCCTATGCTTGCGGTCCTATCGAAT.................................................................................................................................................................................................... 26 0 5 0.20 1 0 0 1 0 0
................................................................................................................................................TCCTATGCTTGCGGTCCTATCG....................................................................................................................................................................................................... 22 0 5 0.20 1 0 0 1 0 0
..................................................................................................................................................................................................................................................AATCCGTTTCGCGTCCGTAAACCAT.................................................................................................. 25 1 6 0.17 1 1 0 0 0 0
......................................................................................................................................................................................................................................................CGTTTCGCGTCCGTAATCCAT.................................................................................................. 21 0 6 0.17 1 1 0 0 0 0
................................................................................................................................................................................................................................................GTAATCCGTTTCGCGTCCGTAAT...................................................................................................... 23 0 6 0.17 1 1 0 0 0 0
...............................................................................................................................................................................................................................................TGTAATCCGTTTCGCGTCCGTAATCAAT.................................................................................................. 28 1 6 0.17 1 0 1 0 0 0
..................................................................................................................................................................................................................................................GATCCGTTTCGCGTCCGTAATCCAT.................................................................................................. 25 1 6 0.17 1 1 0 0 0 0
..................................................................................................................................................................................................................................................AATCCGTTTCGCGTCCGTAATCCATCGT............................................................................................... 28 0 6 0.17 1 1 0 0 0 0
.................................................................................................................................................................................................................................................TAATCCGTTTCGCGTCCGTAATCCA................................................................................................... 25 0 6 0.17 1 1 0 0 0 0
................................................................................................................................................................................................................................................GTAATCCGTTTCGCGTCCGTAATCCATC................................................................................................. 28 0 6 0.17 1 1 0 0 0 0
................................................................................................................................................................................................................................................GTAATCCGTTTCGCGACCGTAATCCAT.................................................................................................. 27 1 6 0.17 1 1 0 0 0 0
...............................................................................................................................................................................................................................................CGTAATCCGTTTCGCGTCCGTAATCCAT.................................................................................................. 28 1 6 0.17 1 0 1 0 0 0
...............................................................................................................................................................................................................................................TGTAATCCGTTTCGCGTCCGTAATCC.................................................................................................... 26 0 6 0.17 1 0 1 0 0 0
................................................................................................................................................................................................................................................GTAATCCGTTTCGCGTCCGTAATCCATGA................................................................................................ 29 2 6 0.17 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................GTTTCGCGTCCGTAATCCATCGTC.............................................................................................. 24 0 6 0.17 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................CCGTTTCGCGTCCGTAATC..................................................................................................... 19 0 6 0.17 1 0 1 0 0 0
................................................................................................................................................................................................................................................GTAATCCGTTTCGCGGCCGTAATCCAT.................................................................................................. 27 1 6 0.17 1 1 0 0 0 0
..................................................................................................................................................CTATGCTTGCGGTCCTATCGAAGT................................................................................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0
.....................................................................CGTGTTCTGTCGCCTCCTGCCGGTTGCA............................................................................................................................................................................................................................................................................ 28 0 7 0.14 1 1 0 0 0 0
..........................................................................TCTGTCGCCCCGTGCCGGTTG.............................................................................................................................................................................................................................................................................. 21 2 7 0.14 1 0 0 0 1 0
.............................TCGAAACATAGGTGCTTGTAGCATCC...................................................................................................................................................................................................................................................................................................................... 26 2 7 0.14 1 1 0 0 0 0
.........................................TGCTTGTAGCAGCCTGACAT................................................................................................................................................................................................................................................................................................................ 20 3 7 0.14 1 0 1 0 0 0
........................................................................................................................................................................................................................................................TTTCGCGTCCGTAATCCAT.................................................................................................. 19 0 8 0.13 1 1 0 0 0 0
....................................................................CCGTGTTCTGTCGCCTCCTGCCGGTT............................................................................................................................................................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0
...................................................................TCCGTGTTCTGTCGCCTCCTGCCGGGT............................................................................................................................................................................................................................................................................... 27 1 9 0.11 1 0 1 0 0 0
...........................................................................CTGTCGCCACCTTCCGGTTTCA............................................................................................................................................................................................................................................................................ 22 3 9 0.11 1 0 0 0 0 1
..................................................................CTCCGTGTTCTGTCGCCTCCTGCCGGTT............................................................................................................................................................................................................................................................................... 28 1 9 0.11 1 0 1 0 0 0
....................................................................CCGTGTTCTGTCGCCTCCTGCCGGT................................................................................................................................................................................................................................................................................ 25 0 10 0.10 1 1 0 0 0 0
...................................................................TCCGTGTTCTGTCGCCTCCTGCCGGT................................................................................................................................................................................................................................................................................ 26 0 10 0.10 1 1 0 0 0 0
................................AAGCTTAGGGGCTTGGAGC.......................................................................................................................................................................................................................................................................................................................... 19 3 11 0.09 1 0 0 1 0 0
....................................................................................................................................................................................................................................................TCCGTTACGCGTCCGTGA....................................................................................................... 18 2 15 0.07 1 1 0 0 0 0
........................................................................................................................................................................................................................ATGCGTATGCCCTGATAG................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0
...................................................................................ACCTGCCGGTTGGAACGA........................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_4485:40748-41112 - dmo_367 CACGGTATGATGGGCCATACAAGGTCGTC--AGCTTCGTATCCACGAACATCGTAAGACTGCAACGGCTAGGCACAAGACAGCGGAGGACGGCCAACGTGGCTGACCTAAAGGAGT--TCCACG-AAGTCCC------CGGA---GACGCG---GAGAACC------------------------AGGATACG-------AA--C--GCC--AGGA--T--AGCTTAAGGGGCGGGA----AACTACTTAC-------------------------------------------------CT--------TGTAT---TAATCTTAGGACACACGA--GCTACGCATAAGGCACTATAGGCAAACATTAGGCAAAGCGCAGGCATTAGGTAGCAGTCTTCCCTTGTTCTCACTAATATTACGGTTAAAACACCCCACAGCAGCAGCCTCGACGTACGCGCTGGAGGGACGGCAACCGTTGGGCGGCCCA
droVir3 scaffold_12960:46113-46296 - CCGAATTTGACGGCCCCTACAAAGTCGTC--TAATTCATATCCCCCAATATTGTGCGGCTGGTGAAAACAGACGACCGCAAGAAGAGGGTGGCCAACATCTCACAATTGAATCCAT--TCTACA-GAAAGAC------GACG---AGCGAC---GAAGAAGACGAAGA---T-C-----------------CA-------GG--C--AGA--GAGATATGGTGCTTAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGG------------------------
droGri2 scaffold_7670:2243-2388 + CGAGATACGGGGACCCGTACCAGATTGTG--GATTTTACCTCACCCGTAATATGCAAGATAAAGGGCATAACGGACAGTCGGATAAGAACAGCACACGTGAGCGACCTGAAGCCGC--ACAACG-ACCGGAA------GAAT---A--------------------------------------CG--------------GGAGA--AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAA------------------------
droWil2 scf2_1100000004943:90115-90230 - CTAAGTATTAAGGCCCGTATAAAATAATC--AAGATTCTTTCCAGCAACGTCGTTAGACTACAAGAAGCCCAGGGGCGTGAGCGACGTACCGCCGGCCTGGCTGACTTAAAGGCCT--TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_666:37254-37426 + CTAAGTACGACGGGCCGTACAAGGTAACC--CGATTCTTATCTCCCAACGTAGTTCGACTACAGATTCAACGAGGCAAACAAAGGAAAACAGCGAGTTTAGCCGACTTAAAGGCCT--TCCACG-GAGTGGA------ACAC---CCCGAG---GAGAACC-CGA---------------------------CGACGCTGGAGAG--ACC--CGAA--T--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTT------------------------
droPer2 scaffold_200:49600-49794 + CCAAATATGAGGGGCCTTACAAAGTAGTA--AAATTTATTTTCCCCACCATAGCACGACTCCAGAAGCATCCGGGAAGACAACGACGAACGGCCGGACTAGCCGACCTCAAGGCCT--ACCACG-ACCACGA------GCAC---ACCCCCACCAGCGACGACGACGAACC----CACCCTCACCAGCGTACA-------CA--CGCAGT--AAGA--T--AGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA------------------------
droAna3 scaffold_9357:512-666 + CAAAGTACGATGGGCCGTACACGGTGGTG--AACTTTGTGTCGCCAGTGATTGCTGTGCTACGGCACGCTGGCACAAGGAAGGAAAAGAGGGCCCACCTGAGTGAGCTGAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGCGC---AGGCATAAAACACAAAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------------------
droBip1 scf7180000394302:2132-2293 - CACAGTATGATGGGCCCTATACTGTCGTC--GATTTCGTGTCGCTGGTAATTGTCATCTTACGGCATGAAACGACGGAAGGA------CCGACCGACGGAAACGACCGACGGAAGG------------------------AA---GGTGCG---GCAGGAGACGCC-------------------A--------------TGGC---CTG---------------------------------------------------------------------------------------------GGGCACCACTAACGCCAAG----------------------------------------------------------------------------------------------------------------------------------------CCCAAGG------------------------
droKik1 scf7180000299893:25327-25490 + CGAAATACGAAGGACCCGTCCGGGCAGCA--AAGTTCCCATCGCCGAACATCGTGCAACTGCACGTGCCAGGAAGCCGACGCCGGCGGACCGCCAGCCTGAACCAGCTGAAGCCGT--ACCACC-AAGACGA------CGAT---GCCGAC------------------------ACCGA------AGCTGAAAC--------CC--ACC--AGGA--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGC------------------------
droFic1 scf7180000453339:27552-27818 + CACGCTTCGACCGGTCCTTCAAGGTCGTC--AAGTTCATCGCCCAAAATATCGTCCGACTCCAGGACCCAAAGACCAGACGCAGACGAACCACCGGCCTGGCTGATCTCAAGGCAT--TCCACG-AAGAAGA------CATC---G---AC------------------------AGTGA------ACCTGAAAGCGCCGATGAC--ATCGCCAAA--T--GAACAAGGTTTGGGGAAAACGGGTAG--AC-------------------------------------------------CTAGTAAACTTGTAATCCTAATGTTAAGACTCACCGCCAGTTTGTATACCGCACTC----CAAAGGTTAGGT------------------------------------------------------------------------------------------AGA------------------------
droEle1 scf7180000490661:21917-22135 + CGAAATACGAGGGTCTATTCAAAGGGACT--GGTTTCGTGTCCATAGTTATGGCGACGATCAAACATACGGTGACAGGGAAGACACACAGAGCATACATTAACGAACTAAAACCCG--AAGTAG-AGAACG---------------------------------AA-------------------G--------------A--------------------AGCCTAAGAAGTTAAA----GAAGATACTCTCCGAACGAATCAATCAAAGCATTTCCGACTACG-------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGCAACATCAGTAGACAAGGCGAAG------------------------
droRho1 scf7180000777586:7051-7303 + CAAAATATACAGGGCCATACAAGGTCATC--AAATTTCTATCGCCAAACGTGGTGCGACTCCAGTTAAAAGGCTCTCGGAAGCGGCTGACGGCCTGCCTACCCGACCTTAAGGAGT--ACCAGA-CCTCC------CGAGAAGCAGCCATC---GGAGGGGGCTGCCACAA--------------------------------CG--GCC--CAGA--C--------------------------------------------------------------TACGACGGCGACGAGCGACCT--------TGTAT---TG--------------GA--GCTACAGCCAAGCGACGACAGGTCCACTTTGCAGAGTGAAGCCACACTTGGTA-----------------------------------------------------------------------GCA------------------------
droBia1 scf7180000297828:3903-4081 - CAAAATATGACGGTCCCTACACCGTAAAAAGGGGTTCATATCCCCTAACCTTGTTCGGTTGCGACGCCCAGTGGAAAGACGTTCACGCTCCGCCAACATCAGCCAGCTGAAACCCT--ATTACT-CTGAAGACTTCGGGAAAGCAGCCGCA---GAAGAAGACGACTGGAC--------------------------------TA--GCC--CGGG--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCG------------------------
droTak1 scf7180000414216:888-1086 - CACGTTTCGACGGACCATTTAAAGTCGTA--AAGTTCATAGCGCAAAACATCATCCGTCTCCAAGACCCGAAGACCAAGCGCAGGCGAACAGCCGGCCTGGCCGACCTCAAGGTTT--TCCACG-AGGATGA------CATC---G---AC------------------------AGCGA------ACC-GAAGACTCCCAAGAC--ACCACCAAG--T--AAACCAGGTATTGGGA----GGGTAGTTAT-------------------------------------------------CTA---------------------------------------------------------------------------------------------------------------------------------------------------------------GTA------------------------
droEug1 scf7180000409847:34376-34543 + CAAGATATGGGGGGCCATTCCGAGTGGTC--AAGTTCCTCTCAACTAACATAGTCAGACTGCAAGACACCGGAAGCCGCCGTCGCCGCACGGCCAGCATAAACAACCTCAAGCCCT--ACCATC-AGGGCAA------CGAG---GATGAC---GACGACGACGACAC---G-C----------CG--------------GGGAC--ACC--AGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT------------------------
dm3 chrU:2086460-2086583 - CTAGGTTTGATTGGCCGTTCACAATAAAA--AATTTCACATCACCGGTTATCTGCATCTTAGAGCACAATGCAACCAGGAAAGTGAACTCGGCTCACATCAGCGACTTTAAGCGACGGGAAGCGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:20202432-20202541 - TGAGGTTCGATGGGCCGTACCAGGTTGTG--GACTTCGGATCGCCACTGATCTGTAAGGTGACCAACCAAAAGGACAGAAAGGAAAGGACGGTACACATCAGCGACCTACAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_705:1706-1864 + CAAGATTTGACGGGCCGTACACGATAAAG--AAATTCACGTCACCAGTTATATGCGTCCTAGAACATAAGACGACTAAGAAAGAAAAGACCGCGCACATCAGCGATCTGAAGCCGG--GAAGCGCG-GAGG------------------C------------CGACGG---G-CCAGGAGATTTCG--------------AGGA---ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAA------------------------
droYak3 v2_chrX_random_033:31013-31182 + CGAGGTTCAATGGACCGTACCAAATTGTG--GATTTCATATCGCCAGTGATAGTGGCGAATCTCCATCGGAAGAACAAAAAGGAACGCACGGTACATGTTAGCGACCTAAAACAGC--AGGATC-AGGAGGA------GAAT---GGTGAC---AAGAACGTGG----------------------AGTTG---------GATCC--ATC--GGAG--G--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGC------------------------
droEre2 scaffold_3340:7097-7278 - CAAGGTTCGACGGGCCGTTCAGGATAAAG--AAGTTCACTTCACCGGTTATCTGCATCCTGGAACACGCGGCAACCAAGAAGGTGAAAACGGCACACAAAGGCGACTTTAAGCCGG--GAAGCGCG-GGCG------------------C------------CGGCGG---G-CCAGAGGACACCG--------------AGTG---CTA---ATG--T--AGCAGAATAGTAGCGG----A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCCTT------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CACGGTATGATGGGCCATACAAGGTCGTC--AGCTTCGTATCCACGAACATCGTAAGACTGCAACGGCTAGGCACAAGACAGCGGAGGACGGCCAACGTGGCTGACCTAAAGGAGT--TCCACG-AAGTCCC------CGGA---GACGCG---GAGAACC------------------------AGGATACG-------AA--C--GCC--AGGA--T--AGCTTAAGGGGCGGGA----AACTACTTAC-------------------------------------------------CT--------TGTAT---TAATCTTAGGACACACGA--GCTACGCATAAGGCACTATAGGCAAACATTAGGCAAAGCGCAGGCATTAGGTAGCAGTCTTCCCTTGTTCTCACTAATATTACGGTTAAAACACCCCACAGCAGCAGCCTCGACGTACGCGCTGGAGGGACGGCAACCGTTGGGCGGCCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................GAACATCGTAAGACTGCAACGGCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGACGTACGCGCTGGA.........................1860.332200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCTCGACGTACGCGCTG...........................2160.171100000
...........................................................................................................TAAAGGAGT--TCCACG-AAGTCCC------CG.............................................................................................................................................................................................................................................................................................................................................................2460.171100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGACGTACGCGCTGGA.........................1960.171100000
..........................................................................CAAGACAGCGGAGGACGGCCAACG.......................................................................................................................................................................................................................................................................................................................................................................................................2470.141000010
.............................................................................................................................................................................................TACG-------AA--C--GCC--AGGA--T--AGC.........................................................................................................................................................................................................................................................................1870.141100000
.......................................................................GCACAAGACAGCGGAGGACGGC............................................................................................................................................................................................................................................................................................................................................................................................................22100.101100000
droVir3
CCGAATTTGACGGCCCCTACAAAGTCGTC--TAATTCATATCCCCCAATATTGTGCGGCTGGTGAAAACAGACGACCGCAAGAAGAGGGTGGCCAACATCTCACAATTGAATCCAT--TCTACA-GAAAGAC------GACG---AGCGAC---GAAGAAGACGAAGA---T-C-----------------CA-------GG--C--AGA--GAGATATGGTGCTTAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGG------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................ATCCAT--TCTACA-GAAAGAC------GACG---AGC.....................................................................................................................................................................................................................................................................................................................................................2615.005000000100000000000000000000110010000100000000000000000000000000
...................................TCATATCCCCCAATATTGTGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................23202.65530046000000000000000000000070000000000000000000000000000000000000
.............CCCCTACAAAGTCGTC--TAATTCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000002000000000000000000000000000000
..............................................................................................................ATCCAT--TCTACA-GAAAGAC------GACG---AG......................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000001000000000100000000000000000000000000
..............................................................................................................ATCCAT--TCTACA-GAAAGAC------GAC............................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000110000000000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGA...................................................................................................................................................................................................................................................................................................................................................22181.2222000011100620000000003001000022020000000100000000000000000000000
................................................................................................................CCAT--TCTACA-GAAAGAC------GACG---AG......................................................................................................................................................................................................................................................................................................................................................23191.0520000002200200000000001001000050130110000000000000000000000000001
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AG......................................................................................................................................................................................................................................................................................................................................................21191.0520000000100310000000001000002120020001000000000000000000000000006
.......................................................CGGCTGGTGAAAACAGACG...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................ATCCAT--TCTACA-GAAAGAC------GACG---........................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
..................................................................AACAGACGACCGCAAGAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................AGA---T-C-----------------CA-------GG--C--AGA--GAGATATGGTG..........................................................................................................................................................................................................................................................................2411.001000000000000000000000001000000000000000000000000000000000000000
...........................................................TGGTGAAAACAGACGACCGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................ATCCAT--TCTACA-GAAAGAC------G..............................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................AAGACGAAGA---T-C-----------------CA-------GG--C--AGA--GAG..................................................................................................................................................................................................................................................................................2311.001000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................CGAAGA---T-C-----------------CA-------GG--C--AGA--GAG..................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................AAGACGAAGA---T-C-----------------CA-------GG--C--AGA--.....................................................................................................................................................................................................................................................................................2011.001000001000000000000000000000000000000000000000000000000000000000
.................................................................AAACAGACGACCGCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
.............CCCCTACAAAGTCGTC--TAATTCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................ATCCAT--TCTACA-GAAAGAC------GACG---AGCGA...................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGC.....................................................................................................................................................................................................................................................................................................................................................22190.7915000001100000110000001002100101000001200000000000000000000000002
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCGA...................................................................................................................................................................................................................................................................................................................................................23180.6712000001000600000000001000000100110000000100000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCGAC---...............................................................................................................................................................................................................................................................................................................................................24180.5610000000030010000000000001000000030000100000000000000000000000001
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AG......................................................................................................................................................................................................................................................................................................................................................22190.5310000000000000000000000001200010000000000000000000000000000000006
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGA...................................................................................................................................................................................................................................................................................................................................................24180.509000000210000000000000001001010000000010000000000000000000000002
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AGC.....................................................................................................................................................................................................................................................................................................................................................23190.479000000000000000000000001100000001000100000000000000000000000005
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---A.......................................................................................................................................................................................................................................................................................................................................................20190.479001000000000000000000000000101100010000000000000000000000000004
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGAC---GA.............................................................................................................................................................................................................................................................................................................................................25180.448000000000100100000001001001011000000001000000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCGAC---GAA............................................................................................................................................................................................................................................................................................................................................27180.448000000000140000000000001000100000000100000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCG....................................................................................................................................................................................................................................................................................................................................................23180.397001000010000000000000002000010000011000000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGAC---...............................................................................................................................................................................................................................................................................................................................................23180.397000000000300000000000000001010010000010000000000000000000000000
................................................................................................................CCAT--TCTACA-GAAAGAC------GACG---A.......................................................................................................................................................................................................................................................................................................................................................22190.377000000000100000000000001001001110000100000000000000000000000000
................................................................................................................CCAT--TCTACA-GAAAGAC------GACG---AGC.....................................................................................................................................................................................................................................................................................................................................................24190.377000000001000000000001000001013000000000000000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGC.....................................................................................................................................................................................................................................................................................................................................................21190.377001001100000000000000001000000010000100000000000000000000000001
......................................................................................................................TCTACA-GAAAGAC------GACG---AGC.....................................................................................................................................................................................................................................................................................................................................................20190.326000001100000000000000003000000000000000000000000000000000000001
...................................TCATATCCCCCAATATTGTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.306100410000000000000000000000000000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAC---GA.............................................................................................................................................................................................................................................................................................................................................27180.285000000100110000000000000100000000000100000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGAC---GAA............................................................................................................................................................................................................................................................................................................................................26180.224000000000000000000000000010000020000001000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AGCGA...................................................................................................................................................................................................................................................................................................................................................25180.224000000000000000000000000200001010000000000000000000000000000000
................................................................................................................CCAT--TCTACA-GAAAGAC------GACG---AGCG....................................................................................................................................................................................................................................................................................................................................................25180.224000000000000000000000000101000001000001000000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCGAC---GA.............................................................................................................................................................................................................................................................................................................................................26180.224000000010010000000000000001010000000000000000000000000000000000
.......................................................................................................................CTACA-GAAAGAC------GACG---AG......................................................................................................................................................................................................................................................................................................................................................18190.214000000020000000000000000000020000000000000000000000000000000000
....................................CATATCCCCCAATATTGTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.204004000000000000000000000000000000000000000000000000000000000000
...................................TCATATCCCCCAATATTGTGCGGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000100000000300000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAC---...............................................................................................................................................................................................................................................................................................................................................25180.173000000010000000000000000000000001000000000000000000000000000001
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AGCG....................................................................................................................................................................................................................................................................................................................................................24180.173000000100000000000000000000000000000010000000000000000000000001
................................................................................................................CCAT--TCTACA-GAAAGAC------GACG---AGCGA...................................................................................................................................................................................................................................................................................................................................................26180.173000000000000100000000000000101000000000000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGAC---T..............................................................................................................................................................................................................................................................................................................................................24180.173000000000000000000000000000000000002001000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---A.......................................................................................................................................................................................................................................................................................................................................................21190.163000000000000000000000000000000000010000000000000000000000000002
......................................................................................................................TCTACA-GAAAGAC------GACG---A.......................................................................................................................................................................................................................................................................................................................................................18190.163000000000000000000001000000000000000000000000000000000000000002
................................................................................................................CCAT--TCTACA-GAAAGAC------GACG---........................................................................................................................................................................................................................................................................................................................................................21190.163000000000000000000001000000000020000000000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGAC---GAAA...........................................................................................................................................................................................................................................................................................................................................27190.163000000000000100000000000001000001000000000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---........................................................................................................................................................................................................................................................................................................................................................20190.163000000000000000000000000000020000000000000000000000000000000001
....................................CATATCCCCCAATATTGTGCGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153003000000000000000000000000000000000000000000000000000000000000
.........................................CCCCCAATATTGTGCGGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
........................................TCCCCCAATATTGTGCGGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153000000200000000000000000000000000000001000000000000000000000000
.........................................................................GACCGCAAGAAGAGGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................19200.153000000000000000000000000000002010000000000000000000000000000000
............................................................................................................................................................AGAAGACGAAGA---T-C-----------------CA-------GG--.............................................................................................................................................................................................................................................................................................18200.153000000030000000000000000000000000000000000000000000000000000000
...................................TCATATCCCCCAATATTGTGCGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153000000000000000000000000000000000020000000100000000000000000000
...........................................................................................................................A-GAAAGAC------GACG---AGCGAC---GAAG...........................................................................................................................................................................................................................................................................................................................................22200.153000000000000000000000000000002010000000000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGAC---G..............................................................................................................................................................................................................................................................................................................................................24180.112000000000000000000000000100010000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAT---T..............................................................................................................................................................................................................................................................................................................................................26180.112000000000000000000000000001000000000100000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGAC---GAAT...........................................................................................................................................................................................................................................................................................................................................27180.112000000000020000000000000000000000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAC---T..............................................................................................................................................................................................................................................................................................................................................26180.112000000000000200000000000000000000000000000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AGCGAC---...............................................................................................................................................................................................................................................................................................................................................26180.112000000000000000000000000010000100000000000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCG....................................................................................................................................................................................................................................................................................................................................................21180.112000000100000000000000000000000000001000000000000000000000000000
........................................................................................................................TACA-GAAAGAC------GACG---AGCGAC---GAAGA..........................................................................................................................................................................................................................................................................................................................................26180.112000000000000000000000000100000100000000000000000000000000000000
........................................................................................................................TACA-GAAAGAC------GACG---AGCGAC---GAAG...........................................................................................................................................................................................................................................................................................................................................25180.112000000000000000000000000000010010000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGTT---A..............................................................................................................................................................................................................................................................................................................................................26190.112000000000020000000000000000000000000000000000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---A.......................................................................................................................................................................................................................................................................................................................................................19190.112000000000000000000000001000010000000000000000000000000000000000
................................................................................................................CCAT--TCTACA-GAAAGAC------GAC............................................................................................................................................................................................................................................................................................................................................................20190.112000000000000000000000000100001000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---TTA.....................................................................................................................................................................................................................................................................................................................................................22190.112000000000000000000000000000020000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---........................................................................................................................................................................................................................................................................................................................................................19190.112000000000000000000000001000010000000000000000000000000000000000
.....................................................................AGACGACCGCAAGAAGAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000002000000000000000000000000000000000000000000000000000000
.............................................................................................................................GAAAGAC------GACG---AGCGAC---GAAT...........................................................................................................................................................................................................................................................................................................................................21200.102000000000020000000000000000000000000000000000000000000000000000
..................................TTCATATCCCCCAATATTGTGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102001000000000000000001000000000000000000000000000000000000000000
..........................................................................ACCGCAAGAAGAGGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000001010000000000000000000000000000000
...................................TCATATCCCCCAATATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000020000000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAC---GT.............................................................................................................................................................................................................................................................................................................................................27180.061000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AGCGAT---...............................................................................................................................................................................................................................................................................................................................................26180.061000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCGAC---G..............................................................................................................................................................................................................................................................................................................................................25180.061000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCG....................................................................................................................................................................................................................................................................................................................................................22180.061000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................TACA-GAAAGAC------GACG---AGCG....................................................................................................................................................................................................................................................................................................................................................19180.061001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAC---A..............................................................................................................................................................................................................................................................................................................................................26180.061000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAC---G..............................................................................................................................................................................................................................................................................................................................................26180.061000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AGCGAA---...............................................................................................................................................................................................................................................................................................................................................23180.061000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCGAC---GAC............................................................................................................................................................................................................................................................................................................................................27180.061000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAC---GAA............................................................................................................................................................................................................................................................................................................................................28180.061000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGAT---...............................................................................................................................................................................................................................................................................................................................................25180.061000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................TACA-GAAAGAC------GACG---AGCGAC---GAAT...........................................................................................................................................................................................................................................................................................................................................25180.061000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................CTACA-GAAAGAC------GACG---AGCGA...................................................................................................................................................................................................................................................................................................................................................21180.061000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCGAA---...............................................................................................................................................................................................................................................................................................................................................24180.061000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................TACA-GAAAGAC------GACG---AGCGAA---T..............................................................................................................................................................................................................................................................................................................................................22180.061000000000000100000000000000000000000000000000000000000000000000
................................................................................................................CCAT--TCTACA-GAAAGAC------GACG---AGCGAC---...............................................................................................................................................................................................................................................................................................................................................27180.061000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AGCGAC---C..............................................................................................................................................................................................................................................................................................................................................27180.061000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................TACA-GAAAGAC------GACG---AGCGA...................................................................................................................................................................................................................................................................................................................................................20180.061000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................TACA-GAAAGAC------GACG---AGCGAC---G..............................................................................................................................................................................................................................................................................................................................................22180.061000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................TACA-GAAAGAC------GACG---AGCGAC---GA.............................................................................................................................................................................................................................................................................................................................................23180.061000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCT....................................................................................................................................................................................................................................................................................................................................................23190.051000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGTT....................................................................................................................................................................................................................................................................................................................................................23190.051000000000000000000000000000000000000000000000000000000000000001
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---TAA.....................................................................................................................................................................................................................................................................................................................................................23190.051000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................ACA-GAAAGAC------GACG---AGCGAC---GAAG...........................................................................................................................................................................................................................................................................................................................................24190.051000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---C.......................................................................................................................................................................................................................................................................................................................................................21190.051000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGTA---T..............................................................................................................................................................................................................................................................................................................................................26190.051000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................ACA-GAAAGAC------GACG---AGCG....................................................................................................................................................................................................................................................................................................................................................18190.051000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AGT.....................................................................................................................................................................................................................................................................................................................................................23190.051000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................CAT--TCTACA-GAAAGAC------GACG---AT......................................................................................................................................................................................................................................................................................................................................................22190.051000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................CTACA-GAAAGAC------GACG---........................................................................................................................................................................................................................................................................................................................................................16190.051000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---AGCGTT---T..............................................................................................................................................................................................................................................................................................................................................26190.051000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................AT--TCTACA-GAAAGAC------GACG---ATT.....................................................................................................................................................................................................................................................................................................................................................22190.051000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AG......................................................................................................................................................................................................................................................................................................................................................20190.051000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................TCTACA-GAAAGAC------GACG---AG......................................................................................................................................................................................................................................................................................................................................................19190.051000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................CTACA-GAAAGAC------GACG---AGCGAC---GAAA...........................................................................................................................................................................................................................................................................................................................................26190.051000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................T--TCTACA-GAAAGAC------GACG---AGCGT...................................................................................................................................................................................................................................................................................................................................................23190.051000000100000000000000000000000000000000000000000000000000000000
......................................................................GACGACCGCAAGAAGAGGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010000000000000000000000000000000000000000000000000000000000
..................................TTCATATCCCCCAATATTGTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.....................................ATATCCCCCAATATTGTGCGGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................GACGACCGCAAGAAGAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000100000000000000000000000000000000000000000000000000
..........................................CCCCAATATTGTGCGGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000010000000000000000000000000000000000000
........................................TCCCCCAATATTGTGCGGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................AAGAC------GACG---AGCGAC---GAAG...........................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................A-GAAAGAC------GACG---AGCGAC---GAAGA..........................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000001000000000000000000000000000000000000000
........................................TCCCCCAATATTGTGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000010000000000000000000000000000000
.......................................ATCCCCCAATATTGTGCGGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................ACCGCAAGAAGAGGGTGGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
........................................TCCCCCAATATTGTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000001000000000000000000000000000000000000
........................................TCCCCCAATATTGTGCGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.........................................CCCCCAATATTGTGCGGCTGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
..................................TTCATATCCCCCAATATTGTGCGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................AGAC------GACG---AGCGAC---GAAG...........................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................AGAC------GACG---AGCGAC---GAAGAAGACG.....................................................................................................................................................................................................................................................................................................................................24200.051000000001000000000000000000000000000000000000000000000000000000
.......................................ATCCCCCAATATTGTGCGGCTGGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................AAAGAC------GACG---AGCGAC---GAT............................................................................................................................................................................................................................................................................................................................................19200.051000000001000000000000000000000000000000000000000000000000000000
...................................TCATATCCCCCAATATTGTGCGGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................G---AGCGAC---GAAGAAGACGAAGA---T-C-----------------TT-------C................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................GAC------GACG---AGCGAC---GAAGA..........................................................................................................................................................................................................................................................................................................................................18200.051000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GCGAC---GAAGAAGACGAAGA---T-C-----------------..........................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................A-GAAAGAC------GACG---AGCGAC---GAA............................................................................................................................................................................................................................................................................................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
......................................................................GACGACCGCAAGAAGAGGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................GACCGCAAGAAGAGGGTGGCCAAC........................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000010000000000000000000000000000000
................................................................................................................CCAT--TCTACA-GAAAGAC------G..............................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................GAC------GACG---AGCGAC---GAAGAAGACG.....................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
........................................TCCCCCAATATTGTGCGGCTGGTGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.........................................CCCCCAATATTGTGCGGCTGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AC------GACG---AGCGAC---GAAGAAGACG.....................................................................................................................................................................................................................................................................................................................................22200.051000001000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AAGAC------GACG---AGCGAC---GAAGA..........................................................................................................................................................................................................................................................................................................................................20200.051000000000100000000000000000000000000000000000000000000000000000
.........................................................................GACCGCAAGAAGAGGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
.....................................ATATCCCCCAATATTGTGCGGCTGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................GAAAGAC------GACG---AGCGAC---GAAG...........................................................................................................................................................................................................................................................................................................................................21200.051000000000000100000000000000000000000000000000000000000000000000
.........................................................................GACCGCAAGAAGAGGGTGGCCAT.........................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
........................................TCCCCCAATATTGTGCGGCTGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
...................................TCATATCCCCCAATATTGTGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
...................................TCATATCCCCCAATATTGTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000100000000000000000000000
.......................................ATCCCCCAATATTGTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................C------GACG---AGCGAC---GAAGAAG........................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
........................................TCCCCCAATATTGTGCGGCTGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000010000000000000000000000000000000
droGri2
CGAGATACGGGGACCCGTACCAGATTGTG--GATTTTACCTCACCCGTAATATGCAAGATAAAGGGCATAACGGACAGTCGGATAAGAACAGCACACGTGAGCGACCTGAAGCCGC--ACAACG-ACCGGAA------GAAT---A--------------------------------------CG--------------GGAGA--AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAA------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CTAAGTATTAAGGCCCGTATAAAATAATC--AAGATTCTTTCCAGCAACGTCGTTAGACTACAAGAAGCCCAGGGGCGTGAGCGACGTACCGCCGGCCTGGCTGACTTAAAGGCCT--TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................ATTCTTTCCAGCAACGTCGTTAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000
...........................................................TACAAGAAGCCCAGGGGCGTGAGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100010
........................................................GACTACAAGAAGCCCAGGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................21170.12201010
.........................................................ACTACAAGAAGCCCAGGGGCGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................24170.12201010
.......................................TTCCAGCAACGTCGTTAGACTACAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................27180.11200020
...................................TTCTTTCCAGCAACGTCGTTAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
...................................TTCTTTCCAGCAACGTCGTTAGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
.....................................CTTTCCAGCAACGTCGTTAGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10211000
................................................CGTCGTTAGACTACAAGAAGCCCAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................27130.08101000
................................................CGTCGTTAGACTACAAGAAGCCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................25140.07101000
.......................................TTCCAGCAACGTCGTTAGACTACAAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................29150.07100100
...................................................CGTTAGACTACAAGAAGCCCAGGGGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................28150.07100100
........................................................GACTACAAGAAGCCCAGGGGCGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................25160.06101000
........................................................GACTACAAGAAGCCCAGGGGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................23160.06100100
..................................................TCGTTAGACTACAAGAAGCCCAGGGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................28160.06100010
...................................................CGTTAGACTACAAGAAGCCCAGGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................25160.06101000
......................................................TAGACTACAAGAAGCCCAGGGGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................25160.06101000
........................................................GACTACAAGAAGCCCAGGGGCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................24160.06101000
..............................................AACGTCGTTAGACTACAAGAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................23160.06101000
.....................................................TTAGACTACAAGAAGCCCAGGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................24170.06101000
......................................................TAGACTACAAGAAGCCCAGGGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................24170.06101000
...................................TTCTTTCCAGCAACGTCGTTAGACTA............................................................................................................................................................................................................................................................................................................................................................................................................................................26170.06101000
.....................................................TTAGACTACAAGAAGCCCAGGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
.......................................TTCCAGCAACGTCGTTAGACTACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................26180.06100010
......................................TTTCCAGCAACGTCGTTAGACTA............................................................................................................................................................................................................................................................................................................................................................................................................................................23180.06101000
.......................................TTCCAGCAACGTCGTTAGACTACAAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................28180.06101000
........................................TCCAGCAACGTCGTTAGACTACAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................26180.06101000
........................................TCCAGCAACGTCGTTAGACTACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................25180.06100010
...................................TTCTTTCCAGCAACGTCGTTAGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
......................................TTTCCAGCAACGTCGTTAGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...................................TTCTTTCCAGCAACGTCGTTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
dp5
CTAAGTACGACGGGCCGTACAAGGTAACC--CGATTCTTATCTCCCAACGTAGTTCGACTACAGATTCAACGAGGCAAACAAAGGAAAACAGCGAGTTTAGCCGACTTAAAGGCCT--TCCACG-GAGTGGA------ACAC---CCCGAG---GAGAACC-CGA---------------------------CGACGCTGGAGAG--ACC--CGAA--T--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTT------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................TACAGATTCAACGAGGCAAACA........................................................................................................................................................................................................................................................................................................................................................................................................................2233.331001000000000
..............................................................AGATTCAACGAGGCAAACAAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................2432.6780800000000
...........................................................TACAGATTCAACGAGGCAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2132.3370510100000
..............................................................AGATTCAACGAGGCAAACAAAGGAA..................................................................................................................................................................................................................................................................................................................................................................................................................2531.3340300000100
...........................................................TACAGATTCAACGAGGCAAACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................2331.0030210000000
...........................................................TACAGATTCAACGAGGCAAACAAA......................................................................................................................................................................................................................................................................................................................................................................................................................2431.0030300000000
...........................................................TACAGATTCAACGAGGCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2030.6720200000000
..............................................................AGATTCAACGAGGCAAACAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................2330.6720200000000
...........................................................TACAGATTCAACGAGGCAAACAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................2630.6720110000000
...........................................................TACAGATTCAACGAGGCAAACAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................2530.6720200000000
...................................................AGTTCGACTACAGATTCAACGAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2530.6720200000000
..........................................................CTACAGATTCAACGAGGCAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310100000000
...................................................AGTTCGACTACAGATTCAACGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000000
...............................................................GATTCAACGAGGCAAACAAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310100000000
....................................................GTTCGACTACAGATTCAACGAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000000
...........................................................TACAGATTCAACGAGGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310100000000
................................................................ATTCAACGAGGCAAACAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
......................................................TCGACTACAGATTCAACGAGGCAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000100
...............................................................GATTCAACGAGGCAAACAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000001000
...........................................................TACAGATTCAACGAGGCAAACAAAGGAA..................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310100000000
...........................................................TACAGATTCAACGAGGCAAACAAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310100000000
.................................................................................................TTAGCCGACTTAAAGGCCT--TCCACG-G...........................................................................................................................................................................................................................................................................................................................................................................26200.1530100000200
...............................................................................................................................GTGGA------ACAC---CCCGAG---GAGAACC-CGA---------------------------CGA......................................................................................................................................................................................................................................................................................................2880.1310000001000
.............................................................................................................................................C---CCCGAG---GAGAACC-CGA---------------------------CGACGCTGG................................................................................................................................................................................................................................................................................................2690.1110100000000
...................................................................................................................................................CGAG---GAGAACC-CGA---------------------------CGACGCTT.................................................................................................................................................................................................................................................................................................2290.1110100000000
CTAAGTACGACGGGCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020200000000
........................................................................................ACAGCGAGTTTAGCCGACTTAAAGG........................................................................................................................................................................................................................................................................................................................................................................................25200.1020200000000
CTAAGTACGACGGGCCGTACAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000200
..................................................................................................TAGCCGACTTAAAGGCCT--TCCACG-G...........................................................................................................................................................................................................................................................................................................................................................................25200.1020200000000
........................................................................................ACAGCGAGTTTAGCCGACTTAAAGGCCT--...................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
..................................................................................................TAGCCGACTTAAAGGCCT--TCCACG-GA..........................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
........................................................................................ACAGCGAGTTTAGCCGACTTAAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
...............................................................................................................................................................CC-CGA---------------------------CGACGCTGGAGAG--ACC--CG...................................................................................................................................................................................................................................................................................23200.0510100000000
CTAAGTACGACGGGCCGTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...............................................................................................................................................................CC-CGA---------------------------CGACGCTGGAGAG--A.........................................................................................................................................................................................................................................................................................19200.0510100000000
.......................................................................................AACAGCGAGTTTAGCCGACTTAAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
..................................................................................................TAGCCGACTTAAAGGCCT--TCC................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................................................................................................GCCGACTTAAAGGCCT--TCCACG-G...........................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.TAAGTACGACGGGCCGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
..................................................................................................................................................................CGA---------------------------CGACGCTGGAGAG--ACC--CC...................................................................................................................................................................................................................................................................................21200.0510000000010
...............................................................................................................................................................CC-CGA---------------------------CGACGCTGGAGAG--ACT--.....................................................................................................................................................................................................................................................................................21200.0510100000000
..................................................................................................TAGCCGACTTAAAGGCCT--TCCAC..............................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
................................................................................................................................................................C-CGA---------------------------CGACGCTGGAGAG--ACC--.....................................................................................................................................................................................................................................................................................20200.0510000000010
.TAAGTACGACGGGCCGTACAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
..............................................................................................................................................................ACC-CGA---------------------------CGACGCTGGAGAG--AC........................................................................................................................................................................................................................................................................................21200.0510100000000
CTAAGTACGACGGGCCGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
......................................................................................................CGACTTAAAGGCCT--TCCACG-G...........................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
................................................................................................................................................................................................CGACGCTGGAGAG--ACC--CGA..................................................................................................................................................................................................................................................................................19200.0510000001000
....................................................................................................................................................................A---------------------------CGACGCTGGAGAG--ACC--C....................................................................................................................................................................................................................................................................................18200.0510100000000
................................................................................................................................................................C-CGA---------------------------CGACGCTGGAGAG--ACC--CGAA--T--............................................................................................................................................................................................................................................................................25200.0510100000000
droPer2
CCAAATATGAGGGGCCTTACAAAGTAGTA--AAATTTATTTTCCCCACCATAGCACGACTCCAGAAGCATCCGGGAAGACAACGACGAACGGCCGGACTAGCCGACCTCAAGGCCT--ACCACG-ACCACGA------GCAC---ACCCCCACCAGCGACGACGACGAACC----CACCCTCACCAGCGTACA-------CA--CGCAGT--AAGA--T--AGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................CACCATAGCACGACTCCAGAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................23200.306050100
.............................................................................................................................................................GACGACGACGAACC----CACCCTCACCAGC.............................................................................................................................................................................................................................................................................................................2760.171100000
..............................................................................ACAACGACGAACGGCCGGACTAGC...................................................................................................................................................................................................................................................................................................................................................................................................24200.153030000
............................................................................................................CAAGGCCT--ACCACG-ACCACGA------GCAC---AC......................................................................................................................................................................................................................................................................................................................................................2790.111010000
............................................................................................................CAAGGCCT--ACCACG-ACCACGA------GCAC---ACC.....................................................................................................................................................................................................................................................................................................................................................2890.111010000
CCAAATATGAGGGGCCTTACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
..............................................................................ACAACGACGAACGGCCGGACTAG....................................................................................................................................................................................................................................................................................................................................................................................................23200.102020000
..........................................................................GAAGACAACGACGAACGGCCGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................24200.102001001
CCAAATATGAGGGGCCTTACAAAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..................................................TAGCACGACTCCAGAAGCATCCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
..........................................................................GAAGACAACGACGAACGGCCGG.........................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
..................................................................................................TAGCCGACCTCAAGGCCT--ACCACG-A...........................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.............................................................................GACAACGACGAACGGCCGGACTAG....................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
............................................................................AGACAACGACGAACGGCCGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
..............................................ACCATAGCACGACTCCAGAAGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000
.........................................................ACTCCAGAAGCATCCGGGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
..................................................TAGCACGACTCCAGAAGCATCCGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.............................................CACCATAGCACGACTCCAGAAGCATCCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................29200.051010000
CCAAATATGAGGGGCCTTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
.............................................CACCATAGCACGACTCCAGAAGCATC..................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
.............................................CACCATAGCACGACTCCAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
................................................................................AACGACGAACGGCCGGACTAGCCGAC...............................................................................................................................................................................................................................................................................................................................................................................................26200.051000001
............................................................................AGACAACGACGAACGGCCGGACTAGC...................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.............................................CACCATAGCACGACTCCAGAAGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
droAna3
CAAAGTACGATGGGCCGTACACGGTGGTG--AACTTTGTGTCGCCAGTGATTGCTGTGCTACGGCACGCTGGCACAAGGAAGGAAAAGAGGGCCCACCTGAGTGAGCTGAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGCGC---AGGCATAAAACACAAAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................TGAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGC...................................................................................................................................................................................................................................................................................................................................25200.408440000
...........................................................................AAGGAAGGAAAAGAGGGCCCACC.......................................................................................................................................................................................................................................................................................................................................................................................................23200.357700000
......................................................................................................TGAGCTGAAAGCCC--AAGCGC-AGGAG.......................................................................................................................................................................................................................................................................................................................................................................25200.357420001
.........................................................................................................................CGC-AGGAGT-------------------------------CGGCGC---AGGCATAAAAC...................................................................................................................................................................................................................................................................................................................2630.331010000
...........................................................................................................TGAAAGCCC--AAGCGC-AGGAGT-------------------------------CGG....................................................................................................................................................................................................................................................................................................................................24200.306402000
...............................................................................AAGGAAAAGAGGGCCCACCT......................................................................................................................................................................................................................................................................................................................................................................................................20200.255500000
...............................................................................AAGGAAAAGAGGGCCCACCTGA....................................................................................................................................................................................................................................................................................................................................................................................................22200.255050000
...............................................................................AAGGAAAAGAGGGCCCACCTGAGTGAG...............................................................................................................................................................................................................................................................................................................................................................................................27200.204400000
...............................................................................AAGGAAAAGAGGGCCCACCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................24200.204400000
......................................................................................................TGAGCTGAAAGCCC--AAGCGC-AGG.........................................................................................................................................................................................................................................................................................................................................................................23200.153210000
...........................................................................AAGGAAGGAAAAGAGGGCCCACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................25200.153120000
.....................CGGTGGTG--AACTTTGTGTCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153200010
............................................................................AGGAAGGAAAAGAGGGCCCACCTGAG...................................................................................................................................................................................................................................................................................................................................................................................................26200.153300000
...............................................................................AAGGAAAAGAGGGCCCACC.......................................................................................................................................................................................................................................................................................................................................................................................................19200.153300000
...........................................................................AAGGAAGGAAAAGAGGGCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
.......................GTGGTG--AACTTTGTGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000002
..........................................................CTACGGCACGCTGGCACAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................21200.102100001
......................................................................................................TGAGCTGAAAGCCC--AAGCGC-AGGAGT-------------------------------C......................................................................................................................................................................................................................................................................................................................................27200.102200000
.........................................CGCCAGTGATTGCTGTGCTACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
..................................TTTGTGTCGCCAGTGATTGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000011
..........................GTG--AACTTTGTGTCGCCAGTGATTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102200000
............................................................................................................GAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGC...................................................................................................................................................................................................................................................................................................................................24200.102110000
...........................................................................................................TGAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGCGC---..............................................................................................................................................................................................................................................................................................................................27200.102200000
......................................................................................................TGAGCTGAAAGCCC--AAGCGC-AGGAGT-------------------------------.......................................................................................................................................................................................................................................................................................................................................26200.102020000
................................................................................................................GCCC--AAGCGC-AGGAGT-------------------------------CGGCGC---..............................................................................................................................................................................................................................................................................................................................22200.102001001
...............................................................................................ACCTGAGTGAGCTGAAAGCCC--AAGCGC-A...........................................................................................................................................................................................................................................................................................................................................................................28200.102200000
...........................TG--AACTTTGTGTCGCCAGTGATTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102200000
...........................................................................AAGGAAGGAAAAGAGGGCCCACCT......................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
..........................................................................CAAGGAAGGAAAAGAGGGCCCAC........................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
...............................................................................................ACCTGAGTGAGCTGAAAGCCC--AAGC...............................................................................................................................................................................................................................................................................................................................................................................25200.102020000
............................G--AACTTTGTGTCGCCAGTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
....................ACGGTGGTG--AACTTTGTGTCGCCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102200000
................................................................................AGGAAAAGAGGGCCCACCTGAGTGAGC..............................................................................................................................................................................................................................................................................................................................................................................................27200.102200000
........................................................................CACAAGGAAGGAAAAGAGGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
.......................................................................GCACAAGGAAGGAAAAGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................22200.102200000
........................................TCGCCAGTGATTGCTGTGCTACGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102200000
...........................................................................................................TGAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGT...................................................................................................................................................................................................................................................................................................................................25200.051100000
..........................................................................CAAGGAAGGAAAAGAGGGCCCACCT......................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
.............GCCGTACACGGTGGTG--AACTTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
..................................................................................................TGAGTGAGCTGAAAGCCC--AAGCG..............................................................................................................................................................................................................................................................................................................................................................................23200.051100000
......................................................................................................TGAGCTGAAAGCCC--AAGCGC-AGGAGT-------------------------------CG.....................................................................................................................................................................................................................................................................................................................................28200.051100000
...............CGTACACGGTGGTG--AACTTTGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.............................................................................GGAAGGAAAAGAGGGCCCACCTGA....................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.................................CTTTGTGTCGCCAGTGATTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
....................ACGGTGGTG--AACTTTGTGTCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000
...........................................................TACGGCACGCTGGCACAAGGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
...................................................................................................................C--AAGCGC-AGGAGT-------------------------------CGGCGC---AGG...........................................................................................................................................................................................................................................................................................................................22200.051100000
..................................................................................................TGAGTGAGCTGAAAGCCC--AAGCGC-AGGA........................................................................................................................................................................................................................................................................................................................................................................28200.051100000
............................................................ACGGCACGCTGGCACAAGGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
................................ACTTTGTGTCGCCAGTGATTGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000
................................................................................AGGAAAAGAGGGCCCACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.................TACACGGTGGTG--AACTTTGTGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
......................................................................................................TGAGCTGAAAGCCC--AAGCGC-AGGA........................................................................................................................................................................................................................................................................................................................................................................24200.051001000
...................................TTGTGTCGCCAGTGATTGCTGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
.................................................................................................................CCC--AAGCGC-AGGAGT-------------------------------CGGCGC---A.............................................................................................................................................................................................................................................................................................................................22200.051100000
........................................TCGCCAGTGATTGCTGTGCTACGGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
.........................................CGCCAGTGATTGCTGTGCTACGGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
..................................................................................................TGAGTGAGCTGAAAGCCC--AAGCGC-AG..........................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.....................................................................................AAGAGGGCCCACCTGAGTGAGC..............................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.....................CGGTGGTG--AACTTTGTGTCGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.......................................................................GCACAAGGAAGGAAAAGAGGGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..............................................................................GAAGGAAAAGAGGGCCCACCTGAGTGA................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
..........................................................CTACGGCACGCTGGCACAAGGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
...................................................................................................................C--AAGCGC-AGGAGT-------------------------------CGGCGC---AGGCATA.......................................................................................................................................................................................................................................................................................................................26200.051010000
...........GGGCCGTACACGGTGGTG--AACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
..................................................................................................TGAGTGAGCTGAAAGCCC--AAGCGC-AGG.........................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.............................................................CGGCACGCTGGCACAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
.................................................................................................CTGAGTGAGCTGAAAGCCC--AAGCGC-............................................................................................................................................................................................................................................................................................................................................................................25200.051010000
...............................................TGATTGCTGTGCTACGGCACGC....................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
................................................................................................................GCCC--AAGCGC-AGGAGT-------------------------------CGGC...................................................................................................................................................................................................................................................................................................................................20200.051010000
......................................................................................................................AAGCGC-AGGAGT-------------------------------CGGCGC---AGGCA.........................................................................................................................................................................................................................................................................................................................23200.051100000
..............................................................................GAAGGAAAAGAGGGCCCACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
..........................................................CTACGGCACGCTGGCACAAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...............................................................................................................AGCCC--AAGCGC-AGGAGT-------------------------------CGG....................................................................................................................................................................................................................................................................................................................................20200.051100000
..........................................................................................................CTGAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGCG..................................................................................................................................................................................................................................................................................................................................27200.051100000
............................................CAGTGATTGCTGTGCTACGGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
............................................................................AGGAAGGAAAAGAGGGCCCACCTGA....................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.................................................................................GGAAAAGAGGGCCCACCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.......................................................................................................................AGCGC-AGGAGT-------------------------------CGGCGC---AGG...........................................................................................................................................................................................................................................................................................................................20200.051100000
..................ACACGGTGGTG--AACTTTGTGTCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
............................................................................................................GAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGCGC---..............................................................................................................................................................................................................................................................................................................................26200.051010000
...........................................CCAGTGATTGCTGTGCTACGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
............GGCCGTACACGGTGGTG--AACTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.........................................................................................................GCTGAAAGCCC--AAGCGC-AGGAGT-------------------------------CGGCG..................................................................................................................................................................................................................................................................................................................................28200.051100000
...................CACGGTGGTG--AACTTTGTGTCGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
...............................................................GCACGCTGGCACAAGGAAGGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
...............................................................................................ACCTGAGTGAGCTGAAAGCCC--...................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
........................................................TGCTACGGCACGCTGGCACAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.............................................................................................CCACCTGAGTGAGCTGAAAG........................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
..............................................................................................................AAGCCC--AAGCGC-AGGAGT-------------------------------CGG....................................................................................................................................................................................................................................................................................................................................21200.051000001
..........................................................CTACGGCACGCTGGCACAAGGAAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000001
..............................................................................................CACCTGAGTGAGCTGAAAGCCC--AAGC...............................................................................................................................................................................................................................................................................................................................................................................26200.051100000
droBip1
CACAGTATGATGGGCCCTATACTGTCGTC--GATTTCGTGTCGCTGGTAATTGTCATCTTACGGCATGAAACGACGGAAGGA------CCGACCGACGGAAACGACCGACGGAAGG------------------------AA---GGTGCG---GCAGGAGACGCC-------------------A--------------TGGC---CTG---------------------------------------------------------------------------------------------GGGCACCACTAACGCCAAG----------------------------------------------------------------------------------------------------------------------------------------CCCAAGG------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CGAAATACGAAGGACCCGTCCGGGCAGCA--AAGTTCCCATCGCCGAACATCGTGCAACTGCACGTGCCAGGAAGCCGACGCCGGCGGACCGCCAGCCTGAACCAGCTGAAGCCGT--ACCACC-AAGACGA------CGAT---GCCGAC------------------------ACCGA------AGCTGAAAC--------CC--ACC--AGGA--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGC------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CACGCTTCGACCGGTCCTTCAAGGTCGTC--AAGTTCATCGCCCAAAATATCGTCCGACTCCAGGACCCAAAGACCAGACGCAGACGAACCACCGGCCTGGCTGATCTCAAGGCAT--TCCACG-AAGAAGA------CATC---G---AC------------------------AGTGA------ACCTGAAAGCGCCGATGAC--ATCGCCAAA--T--GAACAAGGTTTGGGGAAAACGGGTAG--AC-------------------------------------------------CTAGTAAACTTGTAATCCTAATGTTAAGACTCACCGCCAGTTTGTATACCGCACTC----CAAAGGTTAGGT------------------------------------------------------------------------------------------AGA------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGAAATACGAGGGTCTATTCAAAGGGACT--GGTTTCGTGTCCATAGTTATGGCGACGATCAAACATACGGTGACAGGGAAGACACACAGAGCATACATTAACGAACTAAAACCCG--AAGTAG-AGAACG---------------------------------AA-------------------G--------------A--------------------AGCCTAAGAAGTTAAA----GAAGATACTCTCCGAACGAATCAATCAAAGCATTTCCGACTACG-------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGCAACATCAGTAGACAAGGCGAAG------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAAAATATACAGGGCCATACAAGGTCATC--AAATTTCTATCGCCAAACGTGGTGCGACTCCAGTTAAAAGGCTCTCGGAAGCGGCTGACGGCCTGCCTACCCGACCTTAAGGAGT--ACCAGA-CCTCC------CGAGAAGCAGCCATC---GGAGGGGGCTGCCACAA--------------------------------CG--GCC--CAGA--C--------------------------------------------------------------TACGACGGCGACGAGCGACCT--------TGTAT---TG--------------GA--GCTACAGCCAAGCGACGACAGGTCCACTTTGCAGAGTGAAGCCACACTTGGTA-----------------------------------------------------------------------GCA------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAAAATATGACGGTCCCTACACCGTAAAAAGGGGTTCATATCCCCTAACCTTGTTCGGTTGCGACGCCCAGTGGAAAGACGTTCACGCTCCGCCAACATCAGCCAGCTGAAACCCT--ATTACT-CTGAAGACTTCGGGAAAGCAGCCGCA---GAAGAAGACGACTGGAC--------------------------------TA--GCC--CGGG--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCG------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CACGTTTCGACGGACCATTTAAAGTCGTA--AAGTTCATAGCGCAAAACATCATCCGTCTCCAAGACCCGAAGACCAAGCGCAGGCGAACAGCCGGCCTGGCCGACCTCAAGGTTT--TCCACG-AGGATGA------CATC---G---AC------------------------AGCGA------ACC-GAAGACTCCCAAGAC--ACCACCAAG--T--AAACCAGGTATTGGGA----GGGTAGTTAT-------------------------------------------------CTA---------------------------------------------------------------------------------------------------------------------------------------------------------------GTA------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CAAGATATGGGGGGCCATTCCGAGTGGTC--AAGTTCCTCTCAACTAACATAGTCAGACTGCAAGACACCGGAAGCCGCCGTCGCCGCACGGCCAGCATAAACAACCTCAAGCCCT--ACCATC-AGGGCAA------CGAG---GATGAC---GACGACGACGACAC---G-C----------CG--------------GGGAC--ACC--AGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CTAGGTTTGATTGGCCGTTCACAATAAAA--AATTTCACATCACCGGTTATCTGCATCTTAGAGCACAATGCAACCAGGAAAGTGAACTCGGCTCACATCAGCGACTTTAAGCGACGGGAAGCGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droSim2
TGAGGTTCGATGGGCCGTACCAGGTTGTG--GACTTCGGATCGCCACTGATCTGTAAGGTGACCAACCAAAAGGACAGAAAGGAAAGGACGGTACACATCAGCGACCTACAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
CAAGATTTGACGGGCCGTACACGATAAAG--AAATTCACGTCACCAGTTATATGCGTCCTAGAACATAAGACGACTAAGAAAGAAAAGACCGCGCACATCAGCGATCTGAAGCCGG--GAAGCGCG-GAGG------------------C------------CGACGG---G-CCAGGAGATTTCG--------------AGGA---ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAA------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................AAAAGACCGCGCACATCAGCGAT...............................................................................................................................................................................................................................................................................................................................................................................................23918.441666113821
...................................................................................AAAAGACCGCGCACATCAGCGATC..............................................................................................................................................................................................................................................................................................................................................................................................24914.11127541702
..................................TTCACGTCACCAGTTATATGCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................242011.60232227203
..................................TTCACGTCACCAGTTATATGCGTCCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................272010.352071572480
...........................................................................TAAGAAAGAAAAGACCGCGCACATC.....................................................................................................................................................................................................................................................................................................................................................................................................2599.2283471341
..................................TTCACGTCACCAGTTATATGCGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................25206.60132001320
...........................................................................TAAGAAAGAAAAGACCGCGCACA.......................................................................................................................................................................................................................................................................................................................................................................................................2395.2247172280
..................................TTCACGTCACCAGTTATATGCGTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................26203.757574001
...........................................................................TAAGAAAGAAAAGACCGCGCACAT......................................................................................................................................................................................................................................................................................................................................................................................................2492.782581160
..................................TTCACGTCACCAGTTATATGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................23202.6553401111
.....TTTGACGGGCCGTACACGATAAAG--A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.5531160150
.....TTTGACGGGCCGTACACGATAAAG--AAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................27201.5030131133
...........................................................................TAAGAAAGAAAAGACCGCGCACATCA....................................................................................................................................................................................................................................................................................................................................................................................................2691.44135080
...........................................................................TAAGAAAGAAAAGACCGCGCACATCAG...................................................................................................................................................................................................................................................................................................................................................................................................2791.11107030
...................................TCACGTCACCAGTTATATGCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................23201.102221010
..................................TTCACGTCACCAGTTATATGCGTCCTAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................28201.002014060
................................AATTCACGTCACCAGTTATATGCGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................27201.002017021
...........................................................................TAAGAAAGAAAAGACCGCGCACATCAGC..................................................................................................................................................................................................................................................................................................................................................................................................2890.8986011
....................................................................................AAAGACCGCGCACATCAGCGATC..............................................................................................................................................................................................................................................................................................................................................................................................2390.8987010
...................................TCACGTCACCAGTTATATGCGTCCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.851717000
.....TTTGACGGGCCGTACACGATAAAG--AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.651313000
...........................................................................TAAGAAAGAAAAGACCGCGCAC........................................................................................................................................................................................................................................................................................................................................................................................................2290.5651040
....................................................................................................AGCGATCTGAAGCCGG--GAAGCGCG-GA........................................................................................................................................................................................................................................................................................................................................................................26200.55112081
..................................................................................................TCAGCGATCTGAAGCCGG--GAAGCGCG-..........................................................................................................................................................................................................................................................................................................................................................................26200.50105050
.....TTTGACGGGCCGTACACGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.50108011
..................................................................................................TCAGCGATCTGAAGCCGG--GAAGCGCG-G.........................................................................................................................................................................................................................................................................................................................................................................27200.4590090
..................................TTCACGTCACCAGTTATATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.4595040
...................................................................................AAAAGACCGCGCACATCAGCG.................................................................................................................................................................................................................................................................................................................................................................................................2190.4440040
...........................................................................TAAGAAAGAAAAGACCGCGCA.........................................................................................................................................................................................................................................................................................................................................................................................................2190.4442020
....................................................................................................AGCGATCTGAAGCCGG--GAAGCGCG-G.........................................................................................................................................................................................................................................................................................................................................................................25200.4082060
..................................................................................................TCAGCGATCTGAAGCCGG--GAAGCG.............................................................................................................................................................................................................................................................................................................................................................................24200.4083050
...................................................................................AAAAGACCGCGCACATCAGCGATCTG............................................................................................................................................................................................................................................................................................................................................................................................2680.3830030
..................................................................................................................................................................CGACGG---G-CCAGGAGATTTCG--------------AGGA---..........................................................................................................................................................................................................................................................................................2430.3311000
.....................................................................................................................................................................CGG---G-CCAGGAGATTTCG--------------AGGA---ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G............................2530.3311000
...................................................................................AAAAGACCGCGCACATCAGCGA................................................................................................................................................................................................................................................................................................................................................................................................2290.3332010
....................................................................................AAAGACCGCGCACATCAGCGAT...............................................................................................................................................................................................................................................................................................................................................................................................2290.3330030
......TTGACGGGCCGTACACGATAAAG--AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.3060060
...............................................................................................................................................................................AGGAGATTTCG--------------AGGA---ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT...........................2040.2511000
..................................TTCACGTCACCAGTTATATGCGTCCTAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................29200.2555000
..................................................................................................TCAGCGATCTGAAGCCGG--GAAGC..............................................................................................................................................................................................................................................................................................................................................................................23200.2552030
.................................ATTCACGTCACCAGTTATATGCGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2554010
............................................................................AAGAAAGAAAAGACCGCGCACATC.....................................................................................................................................................................................................................................................................................................................................................................................................2490.2222000
............................................................................AAGAAAGAAAAGACCGCGCACA.......................................................................................................................................................................................................................................................................................................................................................................................................2290.2222000
............................................................................AAGAAAGAAAAGACCGCGCACATCAG...................................................................................................................................................................................................................................................................................................................................................................................................2690.2221001
.......TGACGGGCCGTACACGATAAAG--AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2041030
..................................................................................................TCAGCGATCTGAAGCCGG--GAAG...............................................................................................................................................................................................................................................................................................................................................................................22200.2040040
....................................CACGTCACCAGTTATATGCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2044000
.....TTTGACGGGCCGTACACGATAAAG--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2044000
.....TTTGACGGGCCGTACACGATAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2044000
.AAGATTTGACGGGCCGTACACGATAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1532010
................................AATTCACGTCACCAGTTATATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1533000
...................................................................................................CAGCGATCTGAAGCCGG--GAAGCGC............................................................................................................................................................................................................................................................................................................................................................................24200.1530030
..................................TTCACGTCACCAGTTATATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1532010
.................................ATTCACGTCACCAGTTATATGCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530030
.....TTTGACGGGCCGTACACGATAAAG--AT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1532010
...................................................................................................CAGCGATCTGAAGCCGG--GA.................................................................................................................................................................................................................................................................................................................................................................................19200.1532010
......TTGACGGGCCGTACACGATAAAG--AAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1531020
..................................TTCACGTCACCAGTTATATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1533000
.......................................................................................GACCGCGCACATCAGCGATCTGAAG.........................................................................................................................................................................................................................................................................................................................................................................................2570.1411000
...................................................................................AAAAGACCGCGCACATCAGCGATCTGT...........................................................................................................................................................................................................................................................................................................................................................................................2780.1311000
............................................................................................CGCACATCAGCGATCTGAAGCCGG--GA.................................................................................................................................................................................................................................................................................................................................................................................2680.1311000
....................................................................................AAAGACCGCGCACATCAGCGATCTGA...........................................................................................................................................................................................................................................................................................................................................................................................2680.1311000
....................................................................................AAAGACCGCGCACATCAGCGATCTG............................................................................................................................................................................................................................................................................................................................................................................................2580.1310010
...........................................................................TAAGAAAGAAAAGACCGCGCACATCAT...................................................................................................................................................................................................................................................................................................................................................................................................2790.1110010
.....................................................................................AAGACCGCGCACATCAGC..................................................................................................................................................................................................................................................................................................................................................................................................1890.1111000
...........................................................................TAAGAAAGAAAAGACCGC............................................................................................................................................................................................................................................................................................................................................................................................................1890.1110010
.......................................................................CGACTAAGAAAGAAAAGACCGCGC..........................................................................................................................................................................................................................................................................................................................................................................................................2490.1110010
...................................................................................AAAAGACCGCGCACATCAGC..................................................................................................................................................................................................................................................................................................................................................................................................2090.1110010
.....................................................................................AAGACCGCGCACATCAGCGAT...............................................................................................................................................................................................................................................................................................................................................................................................2190.1110010
...............................................................................AAAGAAAAGACCGCGCACATC.....................................................................................................................................................................................................................................................................................................................................................................................................2190.1111000
...........................................................................TAAGAAAGAAAAGACCGCGCACATCAGA..................................................................................................................................................................................................................................................................................................................................................................................................2890.1111000
.................................................................................AGAAAAGACCGCGCACATCAGCGA................................................................................................................................................................................................................................................................................................................................................................................................2490.1111000
....................................................................................AAAGACCGCGCACATCAGC..................................................................................................................................................................................................................................................................................................................................................................................................1990.1110010
............................................................................AAGAAAGAAAAGACCGCGCACAT......................................................................................................................................................................................................................................................................................................................................................................................................2390.1111000
.....................................................................................AAGACCGCGCACATCAGCG.................................................................................................................................................................................................................................................................................................................................................................................................1990.1110010
...................................................................................AAAAGACCGCGCACATCAGCGAC...............................................................................................................................................................................................................................................................................................................................................................................................2390.1110010
..........................................................................CTAAGAAAGAAAAGACCGCGCACATC.....................................................................................................................................................................................................................................................................................................................................................................................................2690.1111000
..................................................................................................TCAGCGATCTGAAGCCGG--GAAGCGC............................................................................................................................................................................................................................................................................................................................................................................25200.1022000
...................................TCACGTCACCAGTTATATGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1022000
...................................................................................................CAGCGATCTGAAGCCGG--GAAGC..............................................................................................................................................................................................................................................................................................................................................................................22200.1020020
.....TTTGACGGGCCGTACACGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1021010
..................................................................................................TCAGCGATCTGAAGCCGG--GAAGCGCG-GA........................................................................................................................................................................................................................................................................................................................................................................28200.1020020
......TTGACGGGCCGTACACGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1021010
.......TGACGGGCCGTACACGATAAAG--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1022000
.......TGACGGGCCGTACACGATAAAG--A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020020
....................................CACGTCACCAGTTATATGCGTCCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1022000
.......TGACGGGCCGTACACGATAAAG--AAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020020
...................................TCACGTCACCAGTTATATGCGTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1021010
CAAGATTTGACGGGCCGTACACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020020
................................AATTCACGTCACCAGTTATATGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1022000
.....TTTGACGGGCCGTACACGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1022000
..................................TTCACGTCACCAGTTATATGCGTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1021010
...........................................................................TAAGAAAGAAAAGACCGTA...........................................................................................................................................................................................................................................................................................................................................................................................................19110.0911000
.....TTTGACGGGCCGTACACGATAAAT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
..................................TTCACGTCACCAGTTATATGCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
.AAGATTTGACGGGCCGTACACGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
...GATTTGACGGGCCGTACACGATAAAG--A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
..................................TTCACGTCACCAGTTATATGCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
...................................................................................................CAGCGATCTGAAGCCGG--GAAGCGCG-..........................................................................................................................................................................................................................................................................................................................................................................25200.0511000
................................AATTCACGTCACCAGTTATATGCGTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510010
..AGATTTGACGGGCCGTACACGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
..........................................ACCAGTTATATGCGTCCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000
...GATTTGACGGGCCGTACACGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
.....TTTGACGGGCCGTACACGATAATT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
........GACGGGCCGTACACGATAAAG--AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
........................................TCACCAGTTATATGCGTCCTAGAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
.......TGACGGGCCGTACACGATAAAG--AAATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010
.....TTTGACGGGCCGTACACGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
.....TTTGACGGGCCGTACACGATAAAG--ACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
..AGATTTGACGGGCCGTACACGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
....ATTTGACGGGCCGTACACGATAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
.........................AAAG--AAATTCACGTCACCAGTTATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
....................................CACGTCACCAGTTATATGCGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
.......TGACGGGCCGTACACGATAAAG--AAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
.....TTTGACGGGCCGTACACGATAAGA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
.....TTTGACGGGCCGTACACGATAAAG--ATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010
...GATTTGACGGGCCGTACACGATAAAA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
.....TTTGACGGGCCGTACACGATAAAA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
.......................ATAAAG--AAATTCACGTCACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
.AAGATTTGACGGGCCGTACACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
................................................................................................CATCAGCGATCTGAAGCCGG--GAAG...............................................................................................................................................................................................................................................................................................................................................................................24200.0511000
.....TTTGACGGGCCGTACACGATAAAG--T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
.......TGACGGGCCGTACACGATAAAA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0511000
......TTGACGGGCCGTACACGATAAAA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
.....TTTGACGGGCCGTACACGATAAAG--TC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010
.AAGATTTGACGGGCCGTACACGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
.......................................................................................................GATCTGAAGCCGG--GAAGCGCG-GA........................................................................................................................................................................................................................................................................................................................................................................23200.0511000
...GATTTGACGGGCCGTACACGATAAAG--AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0511000
................................................................................................CATCAGCGATCTGAAGCCGG--...................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
...................................................................................................CAGCGATCTGAAGCCGG--GAA................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
.......TGACGGGCCGTACACGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
....................................................................................................AGCGATCTGAAGCCGG--GAAGCGCG-T.........................................................................................................................................................................................................................................................................................................................................................................25200.0511000
................................................................................................CATCAGCGATCTGAAGCCGG--GAAGCGC............................................................................................................................................................................................................................................................................................................................................................................27200.0510010
......TTGACGGGCCGTACACGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000
.................................................................................................ATCAGCGATCTGAAGCCGG--GA.................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
..................................................................................................TCAGCGATCTGAAGCCGG--G..................................................................................................................................................................................................................................................................................................................................................................................19200.0511000
.................................ATTCACGTCACCAGTTATATGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
........................................TCACCAGTTATATGCGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000
....................................CACGTCACCAGTTATATGCGTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
..........CGGGCCGTACACGATAAAG--AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
..AGATTTGACGGGCCGTACACGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
.....TTTGACGGGCCGTACACGATACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
......TTGACGGGCCGTACACGATAAAG--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010
...........................AG--AAATTCACGTCACCAGTTATATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
.........................AAAG--AAATTCACGTCACCAGTTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
..................................TTCACGTCACCAGTTATATGCGTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
......TTGACGGGCCGTACACGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
CAAGATTTGACGGGCCGTACACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
...................................................................................................CAGCGATCTGAAGCCGG--G..................................................................................................................................................................................................................................................................................................................................................................................18200.0511000
....................................................................................................AGCGATCTGAAGCCGG--GAAGCGT............................................................................................................................................................................................................................................................................................................................................................................23200.0511000
.......TGACGGGCCGTACACGATAAAG--AAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
.................................ATTCACGTCACCAGTTATATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
.AAGATTTGACGGGCCGTACACGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
......TTGACGGGCCGTACACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
.........................................................................................................TCTGAAGCCGG--GAAGCGC............................................................................................................................................................................................................................................................................................................................................................................18200.0511000
.......TGACGGGCCGTACACGATAAAG--AAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
droYak3
CGAGGTTCAATGGACCGTACCAAATTGTG--GATTTCATATCGCCAGTGATAGTGGCGAATCTCCATCGGAAGAACAAAAAGGAACGCACGGTACATGTTAGCGACCTAAAACAGC--AGGATC-AGGAGGA------GAAT---GGTGAC---AAGAACGTGG----------------------AGTTG---------GATCC--ATC--GGAG--G--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGC------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................TGAC---AAGAACGTGG----------------------AGTTG---------GATCC--A.........................................................................................................................................................................................................................................................................................2511.00101000000000
...........................................................................................................TAAAACAGC--AGGATC-AGGAGG......................................................................................................................................................................................................................................................................................................................................................................21200.45900000030006
...........................................................................................................TAAAACAGC--AGGATC-AGGAGGA------G..............................................................................................................................................................................................................................................................................................................................................................23200.40807100000000
.............ACCGTACCAAATTGTG--GATTTCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.25505000000000
...........................................................................................................TAAAACAGC--AGGATC-AGGAGGA------GA.............................................................................................................................................................................................................................................................................................................................................................24200.20403000010000
...........................................................................................................TAAAACAGC--AGGATC-AGGAGGA------GAA............................................................................................................................................................................................................................................................................................................................................................25200.20403000010000
...........................................................................................................TAAAACAGC--AGGATC-AGGAGGA------...............................................................................................................................................................................................................................................................................................................................................................22200.20404000000000
........................................................................................................ACCTAAAACAGC--AGGATC-AGGA........................................................................................................................................................................................................................................................................................................................................................................22200.15303000000000
........................................................................................................ACCTAAAACAGC--AGGATC-AGG.........................................................................................................................................................................................................................................................................................................................................................................21200.15303000000000
...........................................................................................................TAAAACAGC--AGGATC-AGGAGGA------GAAT---........................................................................................................................................................................................................................................................................................................................................................26160.13202000000000
........................................................................................................ACCTAAAACAGC--AGGATC-AGGAG.......................................................................................................................................................................................................................................................................................................................................................................23200.10200010010000
........................................................................................................ACCTAAAACAGC--AGGATC-AGGAGGA------GA.............................................................................................................................................................................................................................................................................................................................................................27200.10201100000000
.........................................................................AACAAAAAGGAACGCACGGTACATG.......................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000000000
.........................................................................................................CCTAAAACAGC--AGGATC-AGGAGG......................................................................................................................................................................................................................................................................................................................................................................23200.10202000000000
..............................................................................................................AACAGC--AGGATC-AGGAGGA------GAAT---GGT.....................................................................................................................................................................................................................................................................................................................................................26130.08100000010000
.......................................................................................................................GGATC-AGGAGGA------GAAT---GG......................................................................................................................................................................................................................................................................................................................................................18190.05101000000000
................................................................................................................CAGC--AGGATC-AGGAGGA------G..............................................................................................................................................................................................................................................................................................................................................................18200.05101000000000
........................................................................................................ACCTAAAACAGC--AGGATC-AGGAGGA------G..............................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
........................................................................................................ACCTAAAACAGC--AGGATC-AGGAGG......................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
.........................................................................................................CCTAAAACAGC--AGGATC-AGGAGGA------G..............................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
............................................................................................................AAAACAGC--AGGATC-AGGAGGA------G..............................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
............GACCGTACCAAATTGTG--GATTTCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
............................................................................................................AAAACAGC--AGGATC-AGGAGGA------GA.............................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
.......................................................................................................GACCTAAAACAGC--AGGATC-AGGAGGA------...............................................................................................................................................................................................................................................................................................................................................................26200.05100010000000
.....................AAATTGTG--GATTTCATATCGCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
.........................TGTG--GATTTCATATCGCCAGTGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
.................................................................................................................AGC--AGGATC-AGGAGGA------GAA............................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
........................................................................................................ACCTAAAACAGC--AGGATC-AGGAGGA------...............................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
............................................................................................................AAAACAGC--AGGATC-AGGAGGA------GAA............................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
droEre2
CAAGGTTCGACGGGCCGTTCAGGATAAAG--AAGTTCACTTCACCGGTTATCTGCATCCTGGAACACGCGGCAACCAAGAAGGTGAAAACGGCACACAAAGGCGACTTTAAGCCGG--GAAGCGCG-GGCG------------------C------------CGGCGG---G-CCAGAGGACACCG--------------AGTG---CTA---ATG--T--AGCAGAATAGTAGCGG----A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCCTT------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................GATAAAG--AAGTTCACTTCACCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.4022000000
............................................................................................................................CG-GGCG------------------C------------CGGCGG---G-CCAGAGGACA..................................................................................................................................................................................................................................................................................................................24120.3340000004
........................................................TCCTGGAACACGCGGCAACCAAGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................2790.3333000000
........................................................TCCTGGAACACGCGGCAACCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................23110.2733000000
........................................................TCCTGGAACACGCGGCAACCAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................24110.2733000000
......................GATAAAG--AAGTTCACTTCACCGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2511000000
......................GATAAAG--AAGTTCACTTCACCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2511000000
....................................................TGCATCCTGGAACACGCGGCAACCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................27100.2022000000
........................................................TCCTGGAACACGCGGCAACCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................22110.1822000000
........................................................TCCTGGAACACGCGGCAACCAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................26110.1822000000
.....................................................GCATCCTGGAACACGCGGCAACCAAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................28100.1011000000
......................................................CATCCTGGAACACGCGGCAACCAATT.........................................................................................................................................................................................................................................................................................................................................................................................................................26100.1011000000
..................................TTCACTTCACCGGTTATCTGCATCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................27100.1011000000
.................................GTTCACTTCACCGGTTATCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.1011000000
........................................................TCCTGGAACACGCGGCAACCAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................24110.0911000000
........................................................TCCTGGAACACGCGGCAACCAAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................25110.0911000000
.........................................................CCTGGAACACGCGGCAACCAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................23110.0911000000
................................................TATCTGCATCCTGGAACACGCGGCAACC.............................................................................................................................................................................................................................................................................................................................................................................................................................28110.0910000001
........................................................TCCTGGAACACGCGGCAACCAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................24110.0911000000
....................................................TGCATCCTGGAACACGCGGCAACCA............................................................................................................................................................................................................................................................................................................................................................................................................................25110.0911000000
........................................................TCCTGGAACACGCGGCAACCAAGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................26110.0911000000
..................................................TCTGCATCCTGGAACACGCGGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................25110.0911000000
................................................TATCTGCATCCTGGAACACGCGGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................27110.0910000100
........................................................TCCTGGAACACGCGGCAACCAAGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................26120.0811000000
........................................................TCCTGGAACACGCGGCAACCAAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................26120.0811000000
...................................TCACTTCACCGGTTATCTGCATCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0811000000
.........................................................CCTGGAACACGCGGCAACCAAGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................25120.0811000000
........................................................TCCTGGAACACGCGGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................19130.0811000000
.....................................................GCATCCTGGAACACGCGGCAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................23130.0811000000
................................................TATCTGCATCCTGGAACACGCGGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................26150.0711000000
................................................................................................................................GCG------------------C------------CGGCGG---G-CCAGAGGACACC................................................................................................................................................................................................................................................................................................................23160.0610100000
.................................................................................................................................CG------------------C------------CGGCGG---G-CCAGAGGACA..................................................................................................................................................................................................................................................................................................................20170.0611000000
............................................................................AAGAAGGTGAAAACGGCACACA.......................................................................................................................................................................................................................................................................................................................................................................................................22180.0611000000

Generated: 05/17/2015 at 10:09 PM