ID:

dmo_365

 Coordinate:

scaffold_4421:5067-5348 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.1 -14.6 -14.5

Flybase annnotation

CDS [Dmoj\GI11250-cds]; exon [dmoj_GLEANR_11238:2]; CDS [Dmoj\GI11250-cds]; exon [dmoj_GLEANR_11238:1]; intron [Dmoj\GI11250-in]

Repeatable elements

NameClassFamilyStrand
Gypsy1-I_Dmoj-intLTRGypsy-
mature
  1. scaffold_1649:2146-2168 +
  2. dmo_365  scaffold_4421:5170-5192 -
  3. dmo_365  scaffold_4421:5217-5239 -
star
  1. scaffold_1649:2146-2168 +
  2. dmo_365  scaffold_4421:5170-5192 -
  3. dmo_365  scaffold_4421:5217-5239 -

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCAGCATATGGAGTTGAGGATCAGGCTGGCGCACGGGCCAGCGCTGAACGTCAGAAAGAGAGAGACGGGTTCGACAGAAGGAGGGAGCTGGGCGTCCCGCAAGAGCTACAGAAAAGAGTAGGGATCTGATGGGTGGACTCAAGGAGCGGCGACCGCAGATCAAAGTAAGCATCTGATGGGTGGACTCAAGGAGCGGCCACCGCAGATCAAAGTAAGCATCTGATGGGTGGGCTCAAGAAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGGGCTCAAGGAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGGACTCAAGGAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGGACTCAGGGAG
***************************************************************************************************************************************************************...........((((.(((((((((.(((...)))...)))))...............)))).))))...********************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
 V041
embryo
 M060
embryo
 V049
head
.......................................................................................................................................................................................................................................................................GGCTCTGAGGGTTGGGCTC.................................................................................................... 19 3 20 2.15 43 17 20 5 0 0 1
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGGT............ 23 1 8 1.00 8 6 2 0 0 0 0
...............................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTGAAC.................................................................................................................................................................................................... 27 1 2 1.00 2 2 0 0 0 0 0
......................................................................................................................................................................TAAGCATCTGATGGGTGAACTCAAGGA............................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................ATCAAAGTAAACATCTGATGGG.......................................................................................................................................................... 22 1 3 1.00 3 2 0 0 1 0 0
..............................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGT......................................................................................................................................................... 23 0 3 1.00 3 1 1 0 1 0 0
...............................................................................................................................................................ATCAAAGTAAGCATCTGATGGGT........................................................................................................................................................................................................ 23 0 3 1.00 3 1 1 0 1 0 0
..................................................................CGGGTTCTAGAGAAGGATGGAG...................................................................................................................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
...............................................................................................................................................................ATCAAAGTAAACATCTGATGGG......................................................................................................................................................................................................... 22 1 3 1.00 3 2 0 0 1 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGGT........................................................... 23 1 8 1.00 8 6 2 0 0 0 0
..................................................................CGGGTTCGAGAGAAGGAGGCAG...................................................................................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................................CGGGTTCGTCAGAAGGAGGCAG...................................................................................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGGT.......................................................................................................... 23 1 8 1.00 8 6 2 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGG.......... 25 0 8 0.75 6 6 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGT............ 23 0 8 0.75 6 4 1 0 1 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGT........................................................... 23 0 8 0.75 6 4 1 0 1 0 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGG........................................................................................................ 25 0 8 0.75 6 6 0 0 0 0 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGT.......................................................................................................... 23 0 8 0.75 6 4 1 0 1 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGG......................................................... 25 0 8 0.75 6 6 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGG............................................................ 22 0 8 0.63 5 5 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGG............. 22 0 8 0.63 5 5 0 0 0 0 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGG........................................................................................................... 22 0 8 0.63 5 5 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGGAC....................................................... 27 0 7 0.57 4 3 0 0 0 1 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGGAC........ 27 0 7 0.57 4 3 0 0 0 1 0
...............................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTGAA..................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................AGGGATGGGCTCAAGGAGCGG........................................................................................... 21 2 2 0.50 1 0 0 0 0 1 0
...............................................................................................................................................................ATCAAAGTAAGCATATGATGGGTGGA..................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................................TCAAAGTAAGCATCTGATGGGTGAA..................................................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................................................AGCAAAGTAAGCATCTGATGGGTGAAC.................................................................................................................................................................................................... 27 2 2 0.50 1 0 0 0 0 1 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGGTGG......................................................... 25 1 8 0.38 3 1 1 0 0 1 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGGTGG.......... 25 1 8 0.38 3 1 1 0 0 1 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGGTGG........................................................................................................ 25 1 8 0.38 3 1 1 0 0 1 0
...............................................................................................................................................................ATCAAAGTAAGCATCTGATGGG......................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTGA....................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
..............TTGAAGAGCAGGCTGGCGC............................................................................................................................................................................................................................................................................................................................................................. 19 2 3 0.33 1 0 1 0 0 0 0
...............................................................................................................................................................ATCAAAGTAAACATCTGATGGGT........................................................................................................................................................................................................ 23 1 3 0.33 1 0 0 0 1 0 0
...............................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTGA...................................................................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
................................................................................................................................................................................................................CAAAGTAAACATCTGATGGGTGG....................................................................................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTC........................................................................................................................................................ 24 1 3 0.33 1 1 0 0 0 0 0
...............................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTC....................................................................................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGG.......................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................................CAAAGTAAACATCTGATGGGTGG...................................................................................................................................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0
........................................AGCGCTGAACGTCAGAAAGAGAGAGA............................................................................................................................................................................................................................................................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0
...............................................................................................................................................................ATCAAAGTAAACATCTGATGGGTGG...................................................................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................................................................ATCAAAGTAAACATCTGATGGGTGG....................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................................................................ATCAAAGTAAACATCTGATGGGT......................................................................................................................................................... 23 1 3 0.33 1 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGG........................................................................................................... 22 1 8 0.25 2 1 0 0 1 0 0
............................................................................AGAAGGAGGGAGCTGGGCGTC............................................................................................................................................................................................................................................................................................. 21 0 4 0.25 1 0 0 0 0 1 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGG.............. 21 0 8 0.25 2 2 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................GATCAAAGTAAGGATCTGATGGG............. 23 0 8 0.25 2 2 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGG............................................................ 22 1 8 0.25 2 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGGG............. 22 1 8 0.25 2 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................................GATCAAAGTAAGGATCTGATGGG............................................................ 23 0 8 0.25 2 2 0 0 0 0 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGG............................................................................................................ 21 0 8 0.25 2 2 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGG............................................................. 21 0 8 0.25 2 2 0 0 0 0 0
............................................................................................................................................................................................................................................................GATCAAAGTAAGGATCTGATGGG........................................................................................................... 23 0 8 0.25 2 2 0 0 0 0 0
..................................................................CGGGTGGGAAAGAAGGAGGGAG...................................................................................................................................................................................................................................................................................................... 22 3 5 0.20 1 0 0 1 0 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGGA........................................................ 26 0 7 0.14 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGGA......... 26 0 7 0.14 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................GATCAAAGTAAGGATATGATGGGT.......................................................................................................... 24 1 8 0.13 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGG.............. 21 1 8 0.13 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTG.......................................................... 24 0 8 0.13 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGG............................................................................................................ 21 1 8 0.13 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................GATCAAAGTAAGGATATGATGGGT............ 24 1 8 0.13 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................GACTCAAGGAGGGGCCACCGCAGATT................................ 26 2 8 0.13 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................GTGGACTCAAGGAGCGGCCACCGCAG................................... 26 0 8 0.13 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................CGGCCTCCGCAGATCAAAGTAAGGATC................................................................... 27 1 8 0.13 1 0 0 0 0 1 0
.................................................................................................................................................................................................................................................CGGCCTCCGCAGATCAAAGTAAGGATC.................................................................................................................. 27 1 8 0.13 1 0 0 0 0 1 0
...........................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTG........... 24 0 8 0.13 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATATGATGG............................................................. 21 1 8 0.13 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................CGGCCTCCGCAGATCAAAGTAAGGATC.................... 27 1 8 0.13 1 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTG......................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0
.......................................................................................................................................................................................GACTCAAGGAGGGGCCACCGCAGATT............................................................................................................................................................................. 26 2 8 0.13 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................GATCAAAGTAAGGATATGATGGGT........................................................... 24 1 8 0.13 1 0 1 0 0 0 0
....................................................................................................................................................................................GTGGACTCAAGGAGCGGCCACCGCAG................................................................................................................................................................................ 26 0 8 0.13 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................CACCGCAGATCGAAGTAAGGG.................................................................................................................... 21 2 9 0.11 1 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................................................CACCGCAGATCGAAGTAAGGG..................................................................... 21 2 9 0.11 1 0 0 0 1 0 0
................................................................................................................................................................................................................................................................AAAGTAAGGATCTGATGGGTGG........................................................................................................ 22 0 9 0.11 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................AAAGTAAGGATCTGATGGGTGG.......... 22 0 9 0.11 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................AAAGTAAGGATCTGATGGGTGG......................................................... 22 0 9 0.11 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................CACCGCAGATCGAAGTAAGGG...................... 21 2 9 0.11 1 0 0 0 1 0 0
...........................................................................................................................................................................................CAAGGAGCGGCCACCGCA................................................................................................................................................................................. 18 0 10 0.10 1 1 0 0 0 0 0
................................................................................................................................................................................ATGGGTGAACTCAAGGAGCGG......................................................................................................................................................................................... 21 1 10 0.10 1 1 0 0 0 0 0
................................................................................................................................................................................ATGGGTGGACTCAAGGAGCGG......................................................................................................................................................................................... 21 0 10 0.10 1 0 0 0 0 1 0
........................................................................................................................................................................................................................................................................................................................................CAAGGAGCGGCCACCGCA.................................... 18 0 10 0.10 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................CAAGGAGCGGCCACCGCA................................................................................... 18 0 10 0.10 1 1 0 0 0 0 0
.................................................................................................................................ATGGGTGGACTCAAGGAGCGG........................................................................................................................................................................................................................................ 21 0 10 0.10 1 0 0 0 0 1 0
....................................................................................................................................................................................................................................................................................................................................GACTCAAGGAGCGGCCACCG...................................... 20 0 10 0.10 1 1 0 0 0 0 0
.....................................................................................................................................................................................TGAACTCAAGGAGCGGCCTCCG................................................................................................................................................................................... 22 2 10 0.10 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TGAACTCAAGGAGCGGCCTCCG...................................... 22 2 10 0.10 1 1 0 0 0 0 0
.................................................................................................................................ATGGGTGAACTCAAGGAGCGG........................................................................................................................................................................................................................................ 21 1 10 0.10 1 1 0 0 0 0 0
.......................................................................................................................................................................................GACTCAAGGAGCGGCCACCG................................................................................................................................................................................... 20 0 10 0.10 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................ATGGGTGAACTCAAGGAGCGG............................................ 21 1 10 0.10 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................ATGGGTGGACTCAAGGAGCGG............................................ 21 0 10 0.10 1 0 0 0 0 1 0
.............................................................................................................................TCTGATGGGTGGACTCAAG.............................................................................................................................................................................................................................................. 19 0 11 0.09 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................GACTCACGGATCGGCCAACGC..................................... 21 3 11 0.09 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................TCTGATGGGTGGACTCAAG.................................................. 19 0 11 0.09 1 1 0 0 0 0 0
.......................................................................................................................................................................................GACTCACGGATCGGCCAACGC.................................................................................................................................................................................. 21 3 11 0.09 1 0 1 0 0 0 0
............................................................................................................................................................................TCTGATGGGTGGACTCAAG............................................................................................................................................................................................... 19 0 11 0.09 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................................GTTCTGATGGGTGGACCCACG... 21 3 12 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................GTTCTGATGGGTGGACCCACG.................................................. 21 3 12 0.08 1 1 0 0 0 0 0
...........................................................................................................................GTTCTGATGGGTGGACCCACG.............................................................................................................................................................................................................................................. 21 3 12 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................GACTCACGGATCGGCCAACG................................................................................................................................................................................... 20 3 13 0.08 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................GACTCACGGATCGGCCAACG...................................... 20 3 13 0.08 1 0 1 0 0 0 0
...........................................................................................................................................CTAAGTAGCGGCGACCGCA................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

TCGTCGTATACCTCAACTCCTAGTCCGACCGCGTGCCCGGTCGCGACTTGCAGTCTTTCTCTCTCTGCCCAAGCTGTCTTCCTCCCTCGACCCGCAGGGCGTTCTCGATGTCTTTTCTCATCCCTAGACTACCCACCTGAGTTCCTCGCCGCTGGCGTCTAGTTTCATTCGTAGACTACCCACCTGAGTTCCTCGCCGGTGGCGTCTAGTTTCATTCGTAGACTACCCACCCGAGTTCTTCGCCGGTGGCGTCTAGTTTCATTCCTAGACTACCCACCCGAGTTCCTCGCCGGTGGCGTCTAGTTTCATTCCTAGACTACCCACCTGAGTTCCTCGCCGGTGGCGTCTAGTTTCATTCCTAGACTACCCACCTGAGTCCCTC
*********************************************************************************************************************************************************...........((((.(((((((((.(((...)))...)))))...............)))).))))...*************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V056
head
..............................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 26 0 8 21.25 170 81 89 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCATT........................................................................ 26 0 8 21.25 170 81 89 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCATT......................... 26 0 8 21.25 170 81 89 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCATT........................................................................ 25 0 8 7.88 63 36 25 2 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCATT......................... 25 0 8 7.88 63 36 25 2 0 0
...............................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 25 0 8 7.88 63 36 25 2 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCATT........................................................................ 26 1 8 6.75 54 31 18 1 3 1
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCATT......................... 26 1 8 6.75 54 31 18 1 3 1
..............................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCATT...................................................................................................................................................................... 26 1 8 6.75 54 31 18 1 3 1
..............................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 26 1 8 3.50 28 13 10 3 1 1
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATT........................................................................ 26 1 8 3.50 28 13 10 3 1 1
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATT......................... 26 1 8 3.50 28 13 10 3 1 1
...............................................................................................................................................................................................CTCGCCGGAGGCGTCTAGTTTCATT...................................................................................................................................................................... 25 1 8 3.13 25 18 4 3 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGAGGCGTCTAGTTTCATT......................... 25 1 8 3.13 25 18 4 3 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGAGGCGTCTAGTTTCATT........................................................................ 25 1 8 3.13 25 18 4 3 0 0
.................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 23 0 11 2.64 29 21 7 1 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCATT......................... 23 0 11 2.64 29 21 7 1 0 0
................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCATT....................................................................................................................... 23 0 11 2.64 29 21 7 1 0 0
...............................................................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCATT........................................................................ 23 0 11 2.64 29 21 7 1 0 0
..............................................................................................................................................................................................................................................TTCGCCGGTGGCGTCTAGTTTCATT....................................................................................................................... 25 0 2 2.50 5 3 1 1 0 0
............................................................................................................................................................................................................................................................................................TCTCGCCGGTGGCGTCTAGTTTCATT........................................................................ 26 1 9 2.44 22 17 5 0 0 0
...........................................................................................................................................................................................................................................................................................................................................TCTCGCCGGTGGCGTCTAGTTTCATT......................... 26 1 9 2.44 22 17 5 0 0 0
..............................................................................................................................................................................................TCTCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 26 1 9 2.44 22 17 5 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCATT......................... 25 1 8 1.88 15 12 3 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCATT........................................................................ 25 1 8 1.88 15 12 3 0 0 0
...............................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 25 1 8 1.88 15 12 3 0 0 0
.............................................................................................................................................................................................TCCTCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 27 0 8 1.75 14 9 4 1 0 0
..........................................................................................................................................................................................................................................................................................................................................TCCTCGCCGGTGGCGTCTAGTTTCATT......................... 27 0 8 1.75 14 9 4 1 0 0
...........................................................................................................................................................................................................................................................................................TCCTCGCCGGTGGCGTCTAGTTTCATT........................................................................ 27 0 8 1.75 14 9 4 1 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCAT......................................................................... 25 0 9 1.44 13 8 5 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCAT.......................... 25 0 9 1.44 13 8 5 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCAT....................................................................................................................................................................... 25 0 9 1.44 13 8 5 0 0 0
...................................................................................................................................................................................................CCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 21 0 11 1.36 15 2 11 1 1 0
................................................................................................................................................................................................................................................................................................................................................CCGGTGGCGTCTAGTTTCATT......................... 21 0 11 1.36 15 2 11 1 1 0
.................................................................................................................................................................................................................................................................................................CCGGTGGCGTCTAGTTTCATT........................................................................ 21 0 11 1.36 15 2 11 1 1 0
..................................................................................................................................................................................................................................................CCGGTGGCGTCTAGTTTCATT....................................................................................................................... 21 0 11 1.36 15 2 11 1 1 0
.............................................................................................................................................................................................................................................................................................................................................TCGCCGGTGGCGTCTAGTTTCATT......................... 24 0 10 1.30 13 8 5 0 0 0
................................................................................................................................................................................................TCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 24 0 10 1.30 13 8 5 0 0 0
..............................................................................................................................................................................................................................................................................................TCGCCGGTGGCGTCTAGTTTCATT........................................................................ 24 0 10 1.30 13 8 5 0 0 0
...............................................................................................................................................................................................................................................TCGCCGGTGGCGTCTAGTTTCATT....................................................................................................................... 24 0 10 1.30 13 8 5 0 0 0
...............................................................................................................................................................................................................................................................................................CGCCGGTGACGTCTAGTTTCATT........................................................................ 23 1 11 1.09 12 8 3 1 0 0
.................................................................................................................................................................................................CGCCGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 23 1 11 1.09 12 8 3 1 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCGGTGACGTCTAGTTTCATT......................... 23 1 11 1.09 12 8 3 1 0 0
................................................................................................................................................................................................................................................CGCCGGTGACGTCTAGTTTCATT....................................................................................................................... 23 1 11 1.09 12 8 3 1 0 0
...............................................................................................................................................................................................................................................................................................CGCCGGAGGCGTCTAGTTTCATT........................................................................ 23 1 11 1.00 11 5 5 1 0 0
...............................................................................................................................................CCTCGCCGCTGGCGTCTAGTTTCATT..................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................CGCCGGAGGCGTCTAGTTTCATT...................................................................................................................................................................... 23 1 11 1.00 11 5 5 1 0 0
..........................................................................................................................................................................GTAGACTACCCACCTGAGTT................................................................................................................................................................................................ 20 0 2 1.00 2 2 0 0 0 0
.....................................CGGTCGCGGCTTGCAGTCTTTCTCTCT.............................................................................................................................................................................................................................................................................................................................. 27 1 2 1.00 2 2 0 0 0 0
.....................................................................................................................................................................CATTCGTAGACTACCCACTTGAGTT................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................TTGTAGACTACCCACCTGAGTTCCT............................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................ATTTGTAGACTACCCACCTGAGTT................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................................CGCCGGAGGCGTCTAGTTTCATT....................................................................................................................... 23 1 11 1.00 11 5 5 1 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCGGAGGCGTCTAGTTTCATT......................... 23 1 11 1.00 11 5 5 1 0 0
.....................................................................................................................................................................CATTCGTAGACTACCCACTTGAGTTCCT............................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................................................................CCCGAGTTCCTCGCCGGTGACGTCTAGTT............................................................................. 29 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................................................................CGAGTTCCTCGCCGGTGACG.................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................GCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 22 0 11 0.91 10 10 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................GCCGGTGGCGTCTAGTTTCATT......................... 22 0 11 0.91 10 10 0 0 0 0
...................................................................................................................................................................................................................................................CGGTGGCGTCTAGTTTCATT....................................................................................................................... 20 0 11 0.91 10 7 2 0 1 0
....................................................................................................................................................................................................CGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 20 0 11 0.91 10 7 2 0 1 0
.................................................................................................................................................................................................................................................GCCGGTGGCGTCTAGTTTCATT....................................................................................................................... 22 0 11 0.91 10 10 0 0 0 0
..................................................................................................................................................................................................................................................................................................CGGTGGCGTCTAGTTTCATT........................................................................ 20 0 11 0.91 10 7 2 0 1 0
.................................................................................................................................................................................................................................................................................................................................................CGGTGGCGTCTAGTTTCATT......................... 20 0 11 0.91 10 7 2 0 1 0
................................................................................................................................................................................................................................................................................................GCCGGTGGCGTCTAGTTTCATT........................................................................ 22 0 11 0.91 10 10 0 0 0 0
.....................................................................................................................................................................................................GGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 19 0 12 0.83 10 6 0 2 2 0
....................................................................................................................................................................................................................................................GGTGGCGTCTAGTTTCATT....................................................................................................................... 19 0 12 0.83 10 6 0 2 2 0
...................................................................................................................................................................................................................................................................................................GGTGGCGTCTAGTTTCATT........................................................................ 19 0 12 0.83 10 6 0 2 2 0
..................................................................................................................................................................................................................................................................................................................................................GGTGGCGTCTAGTTTCATT......................... 19 0 12 0.83 10 6 0 2 2 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCAGT........................................................................ 26 1 8 0.75 6 0 6 0 0 0
..........................................................................................................................................................................................................................................................................................TTCCTCGCCGGTGGCGTCTAGTTTCATT........................................................................ 28 0 8 0.75 6 5 1 0 0 0
.........................................................................................................................................................................................................................................................................................................................................TTCCTCGCCGGTGGCGTCTAGTTTCATT......................... 28 0 8 0.75 6 5 1 0 0 0
............................................................................................................................................................................................TTCCTCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 28 0 8 0.75 6 5 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCAGT......................... 26 1 8 0.75 6 0 6 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCAGT...................................................................................................................................................................... 26 1 8 0.75 6 0 6 0 0 0
...........................................CGGCTTGCAGTCTTTCTCTCT.............................................................................................................................................................................................................................................................................................................................. 21 1 3 0.67 2 1 1 0 0 0
..........................................................................................................................................................................GTAGACTACCCACTTGAGTT................................................................................................................................................................................................ 20 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................TTCATTTGTAGACTACCCACCTGAGT................................................................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCATTCGTA.................................................................................................................................................................. 27 0 2 0.50 1 0 1 0 0 0
.................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCATTCGT................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTTATT......................... 26 1 8 0.50 4 0 4 0 0 0
.........................................................................................................................................................................TGTAGACTACCCACCTGAGTTCCT............................................................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................GTTTCATTTGTAGACTACCCACCTGAGT................................................................................................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTTATT........................................................................ 26 1 8 0.50 4 0 4 0 0 0
..............................................................................................................................................................................................................................................TTCGCCGGTGACGTCTAGTTTCATT....................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................CTAGTTTCATTCGTAGACTACCCACTT..................................................................................................................................................................................................... 27 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................................................................................TTCGCCGGAGGCGTCTAGTTTCATT....................................................................................................................... 25 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTTATT...................................................................................................................................................................... 26 1 8 0.50 4 0 4 0 0 0
...............................................................................................................................................................................................CTCGCCGGTGACGTCTGGTTTCATTTGT................................................................................................................................................................... 28 3 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................................................................................CCGGTGACGTCTAGTTTCATT....................................................................................................................... 21 1 11 0.45 5 0 5 0 0 0
.................................................................................................................................................................................................................................................................................................CCGGTGACGTCTAGTTTCATT........................................................................ 21 1 11 0.45 5 0 5 0 0 0
................................................................................................................................................................................................................................................................................................................................................CCGGTGACGTCTAGTTTCATT......................... 21 1 11 0.45 5 0 5 0 0 0
...................................................................................................................................................................................................CCGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 21 1 11 0.45 5 0 5 0 0 0
..............................................................................................................................................................................................................................................................................................TCGCCGGTGACGTCTAGTTTCATT........................................................................ 24 1 10 0.40 4 4 0 0 0 0
...............................................................................................................................................................................................................................................TCGCCGGTGACGTCTAGTTTCATT....................................................................................................................... 24 1 10 0.40 4 4 0 0 0 0
...............................................................................................................................................................................................................................................TCGCCGGAGGCGTCTAGTTTCATT....................................................................................................................... 24 1 10 0.40 4 1 2 0 1 0
................................................................................................................................................................................................TCGCCGGAGGCGTCTAGTTTCATT...................................................................................................................................................................... 24 1 10 0.40 4 1 2 0 1 0
.............................................................................................................................................................................................................................................................................................................................................TCGCCGGAGGCGTCTAGTTTCATT......................... 24 1 10 0.40 4 1 2 0 1 0
.............................................................................................................................................................................................................................................................................................................................................TCGCCGGTGACGTCTAGTTTCATT......................... 24 1 10 0.40 4 4 0 0 0 0
..............................................................................................................................................................................................................................................................................................TCGCCGGAGGCGTCTAGTTTCATT........................................................................ 24 1 10 0.40 4 1 2 0 1 0
................................................................................................................................................................................................TCGCCGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 24 1 10 0.40 4 4 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCAGT........................................................................ 26 2 8 0.38 3 0 3 0 0 0
..............................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCAGT...................................................................................................................................................................... 26 2 8 0.38 3 0 3 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCAGT........................................................................ 25 2 8 0.38 3 0 3 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCAGT......................... 26 2 8 0.38 3 0 3 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCAGT...................................................................................................................................................................... 26 2 8 0.38 3 0 3 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCAGT........................................................................ 26 2 8 0.38 3 0 3 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCATTC....................................................................... 27 0 8 0.38 3 1 2 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCAGT......................... 26 2 8 0.38 3 0 3 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCATTC........................ 27 0 8 0.38 3 1 2 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCATTC..................................................................................................................................................................... 27 0 8 0.38 3 1 2 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCAGT......................... 25 2 8 0.38 3 0 3 0 0 0
...............................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCAGT...................................................................................................................................................................... 25 2 8 0.38 3 0 3 0 0 0
...........................................CGGCTTGCAGTCTTTCTCTC............................................................................................................................................................................................................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0
..........................................GCGGCTTGCAGTCTTTCTCTCTCT............................................................................................................................................................................................................................................................................................................................ 24 1 3 0.33 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCAT......................................................................... 24 0 10 0.30 3 2 1 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCAT.......................... 24 0 10 0.30 3 2 1 0 0 0
...............................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCAT....................................................................................................................................................................... 24 0 10 0.30 3 2 1 0 0 0
.............................................................................................................................................................................................CCCTCGCCGGTGGCGTCTAGTTTCAGT...................................................................................................................................................................... 27 2 8 0.25 2 0 2 0 0 0
.....................................................................................................................................................................................................GGTGACGTCTAGTTTCATT...................................................................................................................................................................... 19 1 12 0.25 3 2 0 1 0 0
...............................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCAGT...................................................................................................................................................................... 25 1 8 0.25 2 0 2 0 0 0
................................................................................................................................................................................................................................................CGCCGGAGGCGTCTAGTTTCATTCCT.................................................................................................................... 26 1 8 0.25 2 1 1 0 0 0
......................................................................................TCGACCCGCAGGGCGTTCT..................................................................................................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................CGCCGGAGGCGTCTAGTTTCATTCCT..................................................................... 26 1 8 0.25 2 1 1 0 0 0
...............................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTTATT...................................................................................................................................................................... 25 1 8 0.25 2 0 2 0 0 0
.............................................................................................................................................................................................TCCTCGCCGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 27 1 8 0.25 2 1 0 0 1 0
...........................................................................................................................................................................................................................................................................................CCCTCGCCGGTGGCGTCTAGTTTCAGT........................................................................ 27 2 8 0.25 2 0 2 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCCTCGCCGGTGGCGTCTAGTTTCAGT......................... 27 2 8 0.25 2 0 2 0 0 0
....................................................................................................................................................................................................................................................GGTGACGTCTAGTTTCATT....................................................................................................................... 19 1 12 0.25 3 2 0 1 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGGCTAGTTTCATT......................... 26 1 8 0.25 2 2 0 0 0 0
...........................................................................................................................................................................................................................................................................................TCCTCGCCGGTGACGTCTAGTTTCATT........................................................................ 27 1 8 0.25 2 1 0 0 1 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGGCTAGTTTCATT...................................................................................................................................................................... 26 1 8 0.25 2 2 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCGGAGGCGTCTAGTTTCATTCCT...................... 26 1 8 0.25 2 1 1 0 0 0
..............................................................................................................................................................................................................................................................................................................GTTTCATTCCTATACTACCCACCTGAGTT................................................... 29 1 4 0.25 1 1 0 0 0 0
......................................................................AAGCTGTCTTCCTCCCTCGACCCGC............................................................................................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGGCTAGTTTCATT........................................................................ 26 1 8 0.25 2 2 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................TCCTCGCCGGTGACGTCTAGTTTCATT......................... 27 1 8 0.25 2 1 0 0 1 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCAGT......................... 25 1 8 0.25 2 0 2 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTTATT........................................................................ 25 1 8 0.25 2 0 2 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTTATT......................... 25 1 8 0.25 2 0 2 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTTCAGT........................................................................ 25 1 8 0.25 2 0 2 0 0 0
...................................................................................................................................................................................................................................................................................................GGTGACGTCTAGTTTCATT........................................................................ 19 1 12 0.25 3 2 0 1 0 0
..........................................................................................................................CCTAGACTACCCACCTGAGTT............................................................................................................................................................................................................................................... 21 0 8 0.25 2 2 0 0 0 0
......................................................................................................................................................................................................................................................................................................................CCTAGACTACCCACCTGAGTT................................................... 21 0 8 0.25 2 2 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................GGTGACGTCTAGTTTCATT......................... 19 1 12 0.25 3 2 0 1 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCAT......................................................................... 25 1 9 0.22 2 2 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCAT.......................... 25 1 9 0.22 2 2 0 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCAT....................................................................................................................................................................... 25 1 9 0.22 2 2 0 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCAT......................................................................... 24 1 10 0.20 2 2 0 0 0 0
............................................................................................................................................................................................................................................................................................CATCGCCGGTGGCGTCTAGTTTCATT........................................................................ 26 1 10 0.20 2 0 2 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CATCGCCGGTGGCGTCTAGTTTCATT......................... 26 1 10 0.20 2 0 2 0 0 0
...............................................................................................................................................................................................................................................................................................................CTTCATTCCTAGACTACCCACCTGAGTT................................................... 28 1 5 0.20 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCATTCCT...................... 29 0 5 0.20 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCAT.......................... 24 1 10 0.20 2 2 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTCATTCCT..................................................................... 29 0 5 0.20 1 0 1 0 0 0
...............................................................................................................................................................................................CTCGCCGGTGACGTCTAGTTTCAT....................................................................................................................................................................... 24 1 10 0.20 2 2 0 0 0 0
.............................................................................................................................................................................................................................................CATCGCCGGTGGCGTCTAGTTTCATT....................................................................................................................... 26 1 10 0.20 2 0 2 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCATTCCT...................... 29 1 5 0.20 1 1 0 0 0 0
..............................................................................................................................................................................................CATCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 26 1 10 0.20 2 0 2 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCATTCCT..................................................................... 29 1 5 0.20 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................CCGCCGGAGGCGTCTAGTTTCATT........................................................................ 24 2 11 0.18 2 0 2 0 0 0
...............................................................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTTATT........................................................................ 23 1 11 0.18 2 0 2 0 0 0
................................................................................................................................................................................................................................................................................................GCCGGTGACGTCTAGTTTCATT........................................................................ 22 1 11 0.18 2 2 0 0 0 0
.................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTTATT...................................................................................................................................................................... 23 1 11 0.18 2 0 2 0 0 0
..................................................................................................................................................................................................................................................CCGGAGGCGTCTAGTTTCATT....................................................................................................................... 21 1 11 0.18 2 1 1 0 0 0
...............................................................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCAGT........................................................................ 23 1 11 0.18 2 0 2 0 0 0
..................................................................................................................................................................................................GCCGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 22 1 11 0.18 2 2 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................CCGCCGGAGGCGTCTAGTTTCATT......................... 24 2 11 0.18 2 0 2 0 0 0
................................................................................................................................................................................................CCGCCGGAGGCGTCTAGTTTCATT...................................................................................................................................................................... 24 2 11 0.18 2 0 2 0 0 0
................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTTATT....................................................................................................................... 23 1 11 0.18 2 0 2 0 0 0
.................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCAGT...................................................................................................................................................................... 23 1 11 0.18 2 0 2 0 0 0
.................................................................................................................................................................................................................................................GCCGGTGACGTCTAGTTTCATT....................................................................................................................... 22 1 11 0.18 2 2 0 0 0 0
...................................................................................................................................................................................................CCGGAGGCGTCTAGTTTCATT...................................................................................................................................................................... 21 1 11 0.18 2 1 1 0 0 0
....................................................................................................................................................................................................CGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 20 1 11 0.18 2 1 1 0 0 0
.................................................................................................................................................................................................................................................................................................................................................CGGTGACGTCTAGTTTCATT......................... 20 1 11 0.18 2 1 1 0 0 0
..................................................................................................................................................................................................................................................................................................CGGTGACGTCTAGTTTCATT........................................................................ 20 1 11 0.18 2 1 1 0 0 0
.................................................................................................................................................................................................................................................................................................CCGGAGGCGTCTAGTTTCATT........................................................................ 21 1 11 0.18 2 1 1 0 0 0
................................................................................................................................................................................................................................................................................................................................................CCGGAGGCGTCTAGTTTCATT......................... 21 1 11 0.18 2 1 1 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCAGT......................... 23 1 11 0.18 2 0 2 0 0 0
...............................................................................................................................................................................................................................................CCGCCGGAGGCGTCTAGTTTCATT....................................................................................................................... 24 2 11 0.18 2 0 2 0 0 0
...............................................................................................................................................................................................................................................................................................................................................GCCGGTGACGTCTAGTTTCATT......................... 22 1 11 0.18 2 2 0 0 0 0
................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCAGT....................................................................................................................... 23 1 11 0.18 2 0 2 0 0 0
...................................................................................................................................................................................................................................................CGGTGACGTCTAGTTTCATT....................................................................................................................... 20 1 11 0.18 2 1 1 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTTATT......................... 23 1 11 0.18 2 0 2 0 0 0
................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCAT........................................................................................................................ 22 0 13 0.15 2 2 0 0 0 0
.................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCAT....................................................................................................................................................................... 22 0 13 0.15 2 2 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCAT.......................... 22 0 13 0.15 2 2 0 0 0 0
...............................................................................................................................................................................................................................................................................................CGCCGGTGGCGTCTAGTTTCAT......................................................................... 22 0 13 0.15 2 2 0 0 0 0
......................................................................................................................................................................................................................................................................................................................CCTAGACTACCCACCTGAGTTTCTCGC............................................. 27 1 7 0.14 1 1 0 0 0 0
......................................................................................................................................................................................................................................................CGGCGTCTAGTTTCATTCCTAGACTACCC........................................................................................................... 29 1 7 0.14 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................CGGCGTCTAGTTTCATTCCTAGACTACCC............. 29 1 7 0.14 1 1 0 0 0 0
..........................................................................................................................CCTAGACTACCCACCTGAGTTTCTCGC......................................................................................................................................................................................................................................... 27 1 7 0.14 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................CGGCGTCTAGTTTCATTCCTAGACTACCC............................................................ 29 1 7 0.14 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCAAGTTTCAGT........................................................................ 26 2 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTTAGT......................... 26 2 8 0.13 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCGCCCGTGACGTCTAGTTTCATT...................................................................................................................................................................... 26 2 8 0.13 1 1 0 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTTAGT...................................................................................................................................................................... 26 2 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTACTTTCATT........................................................................ 26 1 8 0.13 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTCCATT........................................................................ 25 1 8 0.13 1 1 0 0 0 0
...............................................................................................................................................................................................CTCGCCGGGGGCGTCTAGTTTCAGT...................................................................................................................................................................... 25 2 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCCCGCCGGTGACGTCTAGTTGCATT......................... 26 3 8 0.13 1 0 0 0 1 0
..............................................................................................................................................................................................CCCCGCCGGTGACGTCTAGTTGCATT...................................................................................................................................................................... 26 3 8 0.13 1 0 0 0 1 0
......................................................................................................................................................................................................................................................TGGCGTCTAGTTTCATTCCTATACT............................................................................................................... 25 1 8 0.13 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................TCCTCGCCCGTGGCGTCTAGTTTTAGT........................................................................ 27 3 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCCGTGACGTCTAGTTTCATT......................... 26 2 8 0.13 1 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................GGCGTCTAGTTTCATTCCTATACT................................................................ 24 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCCCCGGTGGCGTCTAGTTTCATT......................... 25 1 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGTCGTCTAGTTTCATT......................... 26 1 8 0.13 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGTCGTCTAGTTTCATT...................................................................................................................................................................... 26 1 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGGGGCGTCTAGTTTCATT........................................................................ 26 1 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................ATCCTCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 28 1 8 0.13 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGGGGCGTCTAGTTTCAGT........................................................................ 25 2 8 0.13 1 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................ATCCTCGCCGGTGGCGTCTAGTTTCATT........................................................................ 28 1 8 0.13 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................ATCCTCGCCGGTGGCGTCTAGTTTCATT......................... 28 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGGGGCGTCTAGTTTCAGT......................... 25 2 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................CCCCGCCGGTGACGTCTAGTTGCATT........................................................................ 26 3 8 0.13 1 0 0 0 1 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTTATT........................................................................ 26 2 8 0.13 1 0 1 0 0 0
...............................................................................................................................................................................................CTCCCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 25 1 8 0.13 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGTCTACTTTCATT...................................................................................................................................................................... 26 1 8 0.13 1 1 0 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGTCAAGTTTCAGT...................................................................................................................................................................... 26 2 8 0.13 1 0 1 0 0 0
......................................................................................................................................................................................................................................................................................................GGCGTCTAGTTTCATTCCTAGACTA............................................................... 25 0 8 0.13 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................TGGCGTCTAGTTTCATTCCTATACT................................................................ 25 1 8 0.13 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCCTCGCCGGTGGCGTCTAGTTTCATT......................... 27 1 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCAAGTTTCAGT......................... 26 2 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTCCATT......................... 25 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTTAGT........................................................................ 26 2 8 0.13 1 0 1 0 0 0
.............................................................................................................................................................................................................................................................................................CTCCCCGGTGGCGTCTAGTTTCATT........................................................................ 25 1 8 0.13 1 0 1 0 0 0
.............................................................................................................................................................................................TCCTCGCCCGTGGCGTCTAGTTTTAGT...................................................................................................................................................................... 27 3 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCCGTGACGTCTAGTTTCATT........................................................................ 26 2 8 0.13 1 1 0 0 0 0
...........................................................................................................................CTATACTACCCACCTGAGTT............................................................................................................................................................................................................................................... 20 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGAGGCGTCTAGTTTCAGT......................... 25 2 8 0.13 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTTATT...................................................................................................................................................................... 26 2 8 0.13 1 0 1 0 0 0
.......................................................................................................................................................................................................................................................GGCGTCTAGTTTCATTCCTATACT............................................................................................................... 24 1 8 0.13 1 1 0 0 0 0
................................................................................................................................................................................................................................................CGCCGGAGGCGTCTGGTTTCATTCCT.................................................................................................................... 26 2 8 0.13 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATTT........................ 27 2 8 0.13 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGACTAGTTTCATT........................................................................ 25 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATTT....................................................................... 27 2 8 0.13 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................GGCGTCTAGTTTCATTCCTAGACTA................ 25 0 8 0.13 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................TGGCGTCTAGTTTCATTCCTATACT................. 25 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGTCGGTGGCGTCTAGTTTCATT........................................................................ 26 1 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGTCGGTGGCGTCTAGTTTCATT......................... 26 1 8 0.13 1 0 1 0 0 0
.............................................................................................................................................................................................CCCTCGCCGGAGGCGTCTAGTTTCAGT...................................................................................................................................................................... 27 3 8 0.13 1 0 1 0 0 0
.......................................................................................................................................................................................CTGAGTTCCTCGCCGGTGGCGTCTAGT............................................................................................................................................................................ 27 0 8 0.13 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................CCCTCGCCGGTGGCGTCTAGTTTCATT........................................................................ 27 1 8 0.13 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGGCGTATAGTTTCATT...................................................................................................................................................................... 26 1 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTATAGTTTCATT......................... 26 1 8 0.13 1 0 1 0 0 0
...............................................................................................................................................................................................CTCGCCGGTGGCGACTAGTTTCATT...................................................................................................................................................................... 25 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................CTCGCCGGTGGCGACTAGTTTCATT......................... 25 1 8 0.13 1 1 0 0 0 0
..........................................................................................................................CCTATACTACCCACCTGAGTT............................................................................................................................................................................................................................................... 21 1 8 0.13 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................CTATACTACCCACCTGAGTT................................................... 20 1 8 0.13 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................CTCGCCGGAGGCGTCTAGTTTCAGT........................................................................ 25 2 8 0.13 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATTC..................................................................................................................................................................... 27 1 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................CCCTCGCCGGAGGCGTCTAGTTTCAGT........................................................................ 27 3 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................TTTCCTCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 29 1 8 0.13 1 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................................CTGAGTTCCTCGCCGGTGGCGTCTAGT............................... 27 0 8 0.13 1 1 0 0 0 0
..............................................................................................................................................................................................CCTCGTCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 26 1 8 0.13 1 0 1 0 0 0
...............................................................................................................................................................................................CTCGCCGGAGGCGTCTAGTTTCAGT...................................................................................................................................................................... 25 2 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGGGGCGTCTAGTTTCATT......................... 26 1 8 0.13 1 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................CGCCGGAGGCGTCTGGTTTCATTCCT..................................................................... 26 2 8 0.13 1 1 0 0 0 0
..............................................................................................................................................................................................CCTCGCCGGGGGCGTCTAGTTTCATT...................................................................................................................................................................... 26 1 8 0.13 1 0 1 0 0 0
........................................................................................................................................................................................................................................................................................................................................TTTCCTCGCCGGTGGCGTCTAGTTTCATT......................... 29 1 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTTATT......................... 26 2 8 0.13 1 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................TTTCCTCGCCGGTGGCGTCTAGTTTCATT........................................................................ 29 1 8 0.13 1 0 1 0 0 0
...............................................................................................................................................................................................CTCGCCGGTGGCGTCTAGTTCCATT...................................................................................................................................................................... 25 1 8 0.13 1 1 0 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATTT..................................................................................................................................................................... 27 2 8 0.13 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................GGCGTCTAGTTTCATTCCTAGACTA.............................................................................................................. 25 0 8 0.13 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................TCCTCGCCCGTGGCGTCTAGTTTTAGT......................... 27 3 8 0.13 1 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCCTCGCCGGAGGCGTCTAGTTTCAGT......................... 27 3 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTACTTTCATT......................... 26 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGTCGTCTAGTTTCATT........................................................................ 26 1 8 0.13 1 0 1 0 0 0
.............................................................................................................................................................................................CCCTCGCCGGTGGCGTCTAGTTTCATT...................................................................................................................................................................... 27 1 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTATAGTTTCATT........................................................................ 26 1 8 0.13 1 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................GGCGTCTAGTTTCATTCCTATACT................. 24 1 8 0.13 1 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................................CCTATACTACCCACCTGAGTT................................................... 21 1 8 0.13 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCGGAGGCGTCTGGTTTCATTCCT...................... 26 2 8 0.13 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATTC........................ 27 1 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCATTC....................................................................... 27 1 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................TCTCGCCGGTGACGTCTAGTTTCATT........................................................................ 26 2 9 0.11 1 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................................TTCTCGCCGGTGGCGTCTAGTTTCAGT......................... 27 2 9 0.11 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCA.......................................................................... 24 1 9 0.11 1 1 0 0 0 0
.............................................................................................................................................................................................TCCTCGCCGGTGGCGTCTAGTTTCAT....................................................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTC............................ 23 0 9 0.11 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCTCCGGTGGCGTCTAGTTTCA........................................................................................................................................................................ 24 1 9 0.11 1 0 1 0 0 0
.............................................................................................................................................................................................TTCTCGCCGGTGGCGTCTAGTTTCAGT...................................................................................................................................................................... 27 2 9 0.11 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCTCCGGTGGCGTCTAGTTTCA........................... 24 1 9 0.11 1 0 1 0 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGGTGGCGTCTAGTTTC........................................................................... 23 0 9 0.11 1 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................GAGTTCCTCGCCGGAGGCGTCTAGTTT............................................................................ 27 1 9 0.11 1 1 0 0 0 0
..............................................................................................................................................................................................TCTCGCCGGTGACGTCTAGTTTCATT...................................................................................................................................................................... 26 2 9 0.11 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................TCTCGCCGGTGGCGTCTAGTTTCAGT......................... 26 2 9 0.11 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................TTCTCGCCGGTGGCGTCTAGTTTCAGT........................................................................ 27 2 9 0.11 1 0 1 0 0 0
...............................................................................................................................................CCTCGCCGTAGGCGTCTAGTTTCATT..................................................................................................................................................................................................................... 26 2 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................GTTCCTCGCCGGTGGCGTCTAGTTT............................................................................ 25 0 9 0.11 1 1 0 0 0 0
.............................................................................................................................................................................................TCCTCGCCGGTGACGTCTAGTTTCAT....................................................................................................................................................................... 26 1 9 0.11 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCTCGCCGTAGGCGTCTAGTTTCATT......................... 26 2 9 0.11 1 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GTGGCGTCTAGTTTCATTCCT...................... 21 0 9 0.11 1 1 0 0 0 0
..............................................................................................................................................................................................CCTCGCCGGAGGCGTCTAGTTTCAT....................................................................................................................................................................... 25 1 9 0.11 1 0 1 0 0 0
..............................................................................................................................................................................................TCTCGCCGGCGGCGTCTAGTTTCATT...................................................................................................................................................................... 26 2 9 0.11 1 0 0 1 0 0
............................................................................................................................................................................................................................................................................................CCTCGCCGTAGGCGTCTAGTTTCATT........................................................................ 26 2 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................................................GAGTTCCTCGCCGGTGGCGTCTAGTTT.......................................................................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................TCTCGCCGGTGGCGTCTAGTTTCAGT........................................................................ 26 2 9 0.11 1 0 1 0 0 0
..............................................................................................................................................................................................CCTCGCCGGTGACGTCTAGTTTCA........................................................................................................................................................................ 24 1 9 0.11 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_4421:5017-5398 - dmo_365 AGCA-----------G-----------------------------------CATATGGAGTTGAGGATCAGGCTGG---CGCACGGGCCAGCGCTGAACGTCAGAAAGAGAGAGACGGGTTCGACAGAAGGAGGGAGCTGGGCGTCCCGCAAGAGCTACAGAAAAGAGTAGGGATCTGATGGGTGGACTCAAGGAGCGGCGACCGCAGATCAAAGTAAGCATCTGATGGGTGGACTCAAGGAGCGGCCACCGCAGATCAAAGTAAGCATCTGATGGGTGGGCTCAAGAAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGGGCTCAAGGAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGGACTCAAGGAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGG---------------ACTCA--------GGGAG
droVir3 scaffold_12723:31064-31152 + GGCT-----------G-----------------------------------CTCGCTGCTTTGTACGATCAGGTAA---CTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGTCCGTAACTA---------GTG--CGTTCGACCCCAGGACAAAAGAGAATAATTTAAA---------AGAA
droGri2 scaffold_15110:10438478-10438512 + AGAG-----------A-----------------------------------GAGAGAGAG--------------------------------------------------------AGGTGTGAGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAA--------GGGAG
droWil2 scf2_1100000004511:4391893-4391991 - GACA-----------G-----------------------------------CAAACAGCAGCAAGAAAGGGGGTGG---CGG-------GGTGCTGAGAGAAAGAGAGAGAGAGGTGAGAAAGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGGGAGAGCGA----------------------------------------------------------------------------------------------------------------------GAGAGAC---------------AGAGG--------GGAAT
dp5 Unknown_group_327:4881-5039 + GCGG-----------C-----------------------------------GGTAAAAAG------------------------------------------------------------------------------------------------------------TATGCGTGCGGGCGGCTTCGTCTAGAAGTTTCTACTGCGGTACAAAGTAAGCGTGCGGGCGGCTTCGTCTAGAAGTTTCTACTGCGGTACAAAGTAAGCGTGCGGGAAGCTTCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGT---------------ACAAA--------GTAAG
droPer2 scaffold_2258:224-379 + GCGG-----------T-----------------------------------ACAAAGTATGCGT---------------------------------------------------------------------------------------------------------------GCGGGCGGTTTCGTCTAGAAATTTCTACTGCCGTACAAGGTAAGCGTGCGGGCGGCTTCGTCTAGAAGTTTCTACTGCCGTACAAGGTAAGCGTGCGGGCGGCTTCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGT---------------TCAAA--------GTAAG
droAna3 scaffold_13034:1088407-1088480 + GATC-----------C-----------------------------------GGCAGG----------------------CGCAAAGTGAAGCGTTCTCCGTAGAAGAGAGAGAGACGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAAAG----------------------------------------------------------------------------------------------------------------------------------------------ATCTCGAAA-------GAAGG
droBip1 scf7180000396789:8783-8804 + CGCA-----------G-----------------------------------GGCAGGGAGCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAT
droFic1 scf7180000453072:5519-5530 - GGAC-----------T-----------------------------------CGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAG
droEle1 scf7180000488233:22240-22279 + CTCG-----------A-----------------------------------GGAACAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA----------------------------------------------------------------------------------------------------------------------GATC---------------AATTTGAAGGAATGGCGGGAG
droRho1 scf7180000779340:4675-4734 + GGGC--GGTCTAAATGCAAATACACCGGA--------TGACAATCAGGATG--------------CAAT-------GGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAC------------------------------------------------------------TCA-----------AGGA
droBia1 scf7180000300043:24826-24918 - TGGACA-----CGAGGTGAGAATACCGGC------------------------CAGGAACCGACACAAT-------GGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG-CTCGAGGAGAGGCTATCG---------GTAGCAGTCCTACAACAGG---------------AAACA--------GAATA
droTak1 scf7180000415238:195510-195571 + GTAC-----------C-----------------------------------CGTGTAAA--------------------------------CGTCAAATGCCAGAAAGGACCAAACAGCTCCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAAC---------------AAAGG--------AGCTG
droSim2 2r:380255-380274 - CGCA-----------G-----------------------------------GGAAGGGAGCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG
droSec2 scaffold_1772:828-847 - CGCA-----------G-----------------------------------GGAAGGGAGCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG
droYak3 v2_chr2L_random_001:89860-89930 + AGAGGCCATCGGAATTCA-----------AACCGAGGCCAAAATAACAGCA--------------CT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGGAATGGTAA----------------------------------------------------------------------------------------------------------------------GAGT---------------AGCTCAAA---------ATAA
droEre2 scaffold_4784:155727-155782 - TAAAATCAAAGAGCTGCA-----------GCTGCAGTCCAGGATAAGGATC--------------CGCC-------AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAC--------------------------------------------------------------------------CCAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGCA-----------G-----------------------------------CATATGGAGTTGAGGATCAGGCTGG---CGCACGGGCCAGCGCTGAACGTCAGAAAGAGAGAGACGGGTTCGACAGAAGGAGGGAGCTGGGCGTCCCGCAAGAGCTACAGAAAAGAGTAGGGATCTGATGGGTGGACTCAAGGAGCGGCGACCGCAGATCAAAGTAAGCATCTGATGGGTGGACTCAAGGAGCGGCCACCGCAGATCAAAGTAAGCATCTGATGGGTGGGCTCAAGAAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGGGCTCAAGGAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGGACTCAAGGAGCGGCCACCGCAGATCAAAGTAAGGATCTGATGGGTGG---------------ACTCA--------GGGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGT................................................................................................................................................................................2331.003110001
................................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGT...............................................................................................................................................................................................................................2331.003110001
............................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGG---------------..................2580.756600000
............................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGT...................................2380.756410001
.............................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGT..................................................................................2380.756410001
..............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGG...............................................................................................................................2580.756600000
..............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGT.................................................................................................................................2380.756410001
.............................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGG................................................................................2580.756600000
.............................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGG...................................................................................2280.635500000
............................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGG....................................2280.635500000
..............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGG..................................................................................................................................2280.635500000
.............................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGGAC..............................................................................2770.574300010
............................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGG---------------AC................2770.574300010
................................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGG................................................................................................................................................................................................................................2230.331100000
...............................................................................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTGA..............................................................................................................................................................................2530.331100000
................................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTGA.............................................................................................................................................................................................................................2530.331100000
...............................................................................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTC...............................................................................................................................................................................2430.331100000
................................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGGTC..............................................................................................................................................................................................................................2430.331100000
...............................................................................................................................................................................................................................................................ATCAAAGTAAGCATCTGATGGG.................................................................................................................................................................................2230.331100000
.........................................................................................AGCGCTGAACGTCAGAAAGAGAGAGA...................................................................................................................................................................................................................................................................................................................................................2630.331100000
.............................................................................................................................AGAAGGAGGGAGCTGGGCGTC....................................................................................................................................................................................................................................................................................................................2140.251000010
............................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGG.....................................2180.252200000
...........................................................................................................................................................................................................................................................................................................................................................................................................GATCAAAGTAAGGATCTGATGGG....................................2380.252200000
............................................................................................................................................................................................................................................................................................................................................................GATCAAAGTAAGGATCTGATGGG...................................................................................2380.252200000
..............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGG...................................................................................................................................2180.252200000
.............................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGG....................................................................................2180.252200000
.............................................................................................................................................................................................................................................................................................................GATCAAAGTAAGGATCTGATGGG..................................................................................................................................2380.252200000
.............................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGGA...............................................................................2670.141100000
............................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTGG---------------A.................2670.141100000
.............................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTG.................................................................................2480.131100000
..................................................................................................................................................................................................................................................................................................................................................................................GTGGACTCAAGGAGCGGCCACCGCAG..........................................................2680.131100000
............................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTG..................................2480.131100000
..............................................................................................................................................................................................................................................................................................................ATCAAAGTAAGGATCTGATGGGTG................................................................................................................................2480.131100000
.....................................................................................................................................................................................................................................GTGGACTCAAGGAGCGGCCACCGCAG.......................................................................................................................................................................................................2680.131100000
.................................................................................................................................................................................................................................................................................................................AAAGTAAGGATCTGATGGGTGG...............................................................................................................................2290.111100000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAAGTAAGGATCTGATGGGTGG---------------..................2290.111100000
................................................................................................................................................................................................................................................................................................................................................................AAAGTAAGGATCTGATGGGTGG................................................................................2290.111100000
............................................................................................................................................................................................................................................CAAGGAGCGGCCACCGCA........................................................................................................................................................................................................18100.101100000
.................................................................................................................................................................................................................................ATGGGTGGACTCAAGGAGCGG................................................................................................................................................................................................................21100.101000010
.........................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGCGGCCACCGCA...........................................................18100.101100000
..........................................................................................................................................................................................................................................................................................................................................CAAGGAGCGGCCACCGCA..........................................................................................................18100.101100000
..................................................................................................................................................................................ATGGGTGGACTCAAGGAGCGG...............................................................................................................................................................................................................................................................21100.101000010
.....................................................................................................................................................................................................................................................................................................................................................................................GACTCAAGGAGCGGCCACCG.............................................................20100.101100000
........................................................................................................................................................................................................................................GACTCAAGGAGCGGCCACCG..........................................................................................................................................................................................................20100.101100000
..............................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGACTCAAGGAGCGG...................................................................21100.101000010
..............................................................................................................................................................................TCTGATGGGTGGACTCAAG.....................................................................................................................................................................................................................................................................19110.091100000
..........................................................................................................................................................................................................................................................................................................................................................................TCTGATGGGTGGACTCAAG.........................................................................19110.091100000
.............................................................................................................................................................................................................................TCTGATGGGTGGACTCAAG......................................................................................................................................................................................................................19110.091100000
droVir3
GGCT-----------G-----------------------------------CTCGCTGCTTTGTACGATCAGGTAA---CTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGTCCGTAACTA---------GTG--CGTTCGACCCCAGGACAAAAGAGAATAATTTAAA---------AGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................TGTACGATCAGGTAA---CTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------............................................................................18200.153000000020000000000000000000001000000000000000000000000000000000
droGri2
AGAG-----------A-----------------------------------GAGAGAGAG--------------------------------------------------------AGGTGTGAGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAA--------GGGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GACA-----------G-----------------------------------CAAACAGCAGCAAGAAAGGGGGTGG---CGG-------GGTGCTGAGAGAAAGAGAGAGAGAGGTGAGAAAGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGGGAGAGCGA----------------------------------------------------------------------------------------------------------------------GAGAGAC---------------AGAGG--------GGAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................AGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGGGAGAGCGA----------------------------------------------------------------------------------------------------------------------GA......................................19190.05100001
dp5
GCGG-----------C-----------------------------------GGTAAAAAG------------------------------------------------------------------------------------------------------------TATGCGTGCGGGCGGCTTCGTCTAGAAGTTTCTACTGCGGTACAAAGTAAGCGTGCGGGCGGCTTCGTCTAGAAGTTTCTACTGCGGTACAAAGTAAGCGTGCGGGAAGCTTCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGT---------------ACAAA--------GTAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGT.........................................................................................................................................................................................................................................................................21203.456904910109900
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTCT.......................................................................................................................................................................................................................................................................23202.454903900005500
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCG..........................................................................................................................................................................................................................................................................20202.454903500104630
......................................................................................................................................................................................................................................................................TAAGCGTGCGGGAAGCTTCGTCTA........................................................................................................................................................................2412.0020110000000
......................................................................................................................................................................................................................................................................TAAGCGTGCGGGAAGCTTCGTC..........................................................................................................................................................................2212.0020200000000
...............................................................................................................................................................................................................................................................TACAAAGTAAGCGTGCGGGAAGCT...............................................................................................................................................................................2412.0020200000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTCTA......................................................................................................................................................................................................................................................................2461.67100400003210
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTC........................................................................................................................................................................................................................................................................22201.653300803018310
...............................................................................................................................................................................................................................................................TACAAAGTAAGCGTGCGGGAAGC................................................................................................................................................................................2311.0010100000000
......................................................................................................................................................................................................................................................................TAAGCGTGCGGGAAGCTTCG............................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................TAAGCGTGCGGGAAGCTTCGTCTAGA......................................................................................................................................................................2611.0010100000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTCTAG.....................................................................................................................................................................................................................................................................2561.0060200004000
......................................................................................................................................................................................................................................................................TAAGCGTGCGGGAAGCTTCGTCTAG.......................................................................................................................................................................2511.0010000001000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCGTC.........................................................................................................................................................................................................................22190.891701500001010
.....................................................................................................................................................................................................TTCTACTGCGGTACAAAGTAAGCG.........................................................................................................................................................................................................................................2450.6030200001000
....................................................................................................................................................................................................................................................TTCTACTGCGGTACAAAGTAAGCG..........................................................................................................................................................................................2450.6030200001000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTCTAGA....................................................................................................................................................................................................................................................................2660.5030200001000
................................................................................................................................................................................................................TACAAAGTAAGCGTGCGGGC..................................................................................................................................................................................................................................2040.5020101000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTT............................................................................................................................................................................................................................................................................18200.4590810000000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCGTCTA.......................................................................................................................................................................................................................24180.4480700000010
..........................................................................................................................................................................................................................................................TGCGGTACAAAGTAAGCGTGCGGG....................................................................................................................................................................................2450.4020200000000
........................................................................................................................................................................................................TACTGCGGTACAAAGTAAGCGTGCGG....................................................................................................................................................................................................................................2650.4020200000000
...........................................................................................................................................................................................................TGCGGTACAAAGTAAGCGTGCGGG...................................................................................................................................................................................................................................2450.4020200000000
.......................................................................................................................................................................................................................................................TACTGCGGTACAAAGTAAGCGTGCGG.....................................................................................................................................................................................2650.4020200000000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCGTCT........................................................................................................................................................................................................................23180.3970500002000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCGT..........................................................................................................................................................................................................................21190.3260300000300
................................................................................................................................................................................................................TACAAAGTAAGCGTGCGGGCG.................................................................................................................................................................................................................................2140.2510100000000
............................................................................................................................................................................................................GCGGTACAAAGTAAGCGTGCGGGC..................................................................................................................................................................................................................................2440.2510000001000
.........................................................................................................................................................................ATGCGTGCGGGCGGCTTCGT.........................................................................................................................................................................................................................................................................20200.2550500000000
..............................................................................................................................................................................................TAGAAGTTTCTACTGCGGTACA..................................................................................................................................................................................................................................................2290.2220100000100
............................................................................................................................................................................................................................................................................................TAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGT---------------ACA...............2290.2220100000100
.............................................................................................................................................................................................................................................TAGAAGTTTCTACTGCGGTACA...................................................................................................................................................................................................2290.2220100000100
....................................................................................................................................................................................................................................................TTCTACTGCGGTACAAAGTAAGCGTGC.......................................................................................................................................................................................2750.2010000001000
.......................................................................................................................................................................................................CTACTGCGGTACAAAGTAAGCGTGCG.....................................................................................................................................................................................................................................2650.2010100000000
......................................................................................................................................................................................................TCTACTGCGGTACAAAGTAAGCGTGC......................................................................................................................................................................................................................................2650.2010000010000
.......................................................................................................................................................................................................................................................TACTGCGGTACAAAGTAAGCGTG........................................................................................................................................................................................2350.2010000000010
...........................................................................................................................................................................................................TGCGGTACAAAGTAAGCGTGCGG....................................................................................................................................................................................................................................2350.2010000000010
......................................................................................................................................................................................................................................................CTACTGCGGTACAAAGTAAGCGTGCG......................................................................................................................................................................................2650.2010100000000
.....................................................................................................................................................................................................TTCTACTGCGGTACAAAGTAAGCGTGC......................................................................................................................................................................................................................................2750.2010000001000
........................................................................................................................................................................................................TACTGCGGTACAAAGTAAGCGTG.......................................................................................................................................................................................................................................2350.2010000000010
....................................................................................................................................................................................................TTTCTACTGCGGTACAAAGTAAGCG.........................................................................................................................................................................................................................................2550.2010000001000
...................................................................................................................................................................................................................................................TTTCTACTGCGGTACAAAGTAAGCG..........................................................................................................................................................................................2550.2010000001000
..........................................................................................................................................................................................................................................................TGCGGTACAAAGTAAGCGTGCGG.....................................................................................................................................................................................2350.2010000000010
.....................................................................................................................................................................................................................................................TCTACTGCGGTACAAAGTAAGCGTGC.......................................................................................................................................................................................2650.2010000010000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCGTCTAGA.....................................................................................................................................................................................................................26160.1930100000110
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTCTAGAAG..................................................................................................................................................................................................................................................................2860.1710100000000
.......................................................................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCG...................................22120.1720200000000
.........................................................................................................................................................................................TCGTCTAGAAGTTTCTACTGCG.......................................................................................................................................................................................................................................................22120.1720200000000
...........................................................G------------------------------------------------------------------------------------------------------------TATGCGTGCGGGCGGCTTCG..........................................................................................................................................................................................................................................................................2160.1710100000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTCTAA.....................................................................................................................................................................................................................................................................2560.1710000000100
.........................................................................................................................................................................ATGCGTGCGGGCGGCTTCGTCTAGA....................................................................................................................................................................................................................................................................2560.1710100000000
........................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTACTGCG........................................................................................................................................................................................................22120.1720200000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTC...........................................................................................................................................................................................................................................................................19200.1530210000000
.........................................................................................................................................................................ATGCGTGCGGGCGGCTTCGTC........................................................................................................................................................................................................................................................................21200.1530300000000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCGTCTAG......................................................................................................................................................................................................................25160.1320200000000
.........................................................................................................................................................................................TCGTCTAGAAGTTTCTACTGCGGTA....................................................................................................................................................................................................................................................2590.1110100000000
........................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTACTGCGGTA.....................................................................................................................................................................................................2590.1110100000000
.......................................................................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGT---------------A.................2590.1110100000000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCG...........................................................................................................................................................................................................................20190.1120200000000
.........................................................................................................................................................................ATGCGTGCGGGCGGCTTCGTCT.......................................................................................................................................................................................................................................................................22200.1020200000000
.........................................................................................................................................................................ATGCGTGCGGGCGGCTTCG..........................................................................................................................................................................................................................................................................19200.1020200000000
..............................................................................................................................................................................TGCGGGCGGCTTCGTCTAGAAG..................................................................................................................................................................................................................................................................22200.1020200000000
.............................................................................................................................................................................................................................TGCGGGCGGCTTCGTCTAGAAG...................................................................................................................................................................................................................22200.1020200000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTCTT......................................................................................................................................................................................................................................................................24200.1020200000000
............................................................................................................................................................................................................................................................................................TAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGA---------------..................19120.0810100000000
.............................................................................................................................................................................................................................................TAGAAGTTTCTACTGCGGA......................................................................................................................................................................................................19120.0810100000000
........................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTACTGCGG.......................................................................................................................................................................................................23120.0810100000000
.........................................................................................................................................................................................................................................CGTCTAGAAGTTTCTACTGCG........................................................................................................................................................................................................21120.0810100000000
..........................................................................................................................................................................................CGTCTAGAAGTTTCTACTGCGG......................................................................................................................................................................................................................................................22120.0810000000010
..............................................................................................................................................................................................TAGAAGTTTCTACTGCGGT.....................................................................................................................................................................................................................................................19120.0810100000000
.........................................................................................................................................................................................................................................CGTCTAGAAGTTTCTACTGCGGT......................................................................................................................................................................................................23120.0810000001000
.............................................................................................................................................................................................CTAGAAGTTTCTACTGCGG......................................................................................................................................................................................................................................................19120.0810100000000
............................................................................................................................................................................................................................................................................................TAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGT---------------..................19120.0810100000000
...........................................................................................................................................................................................................................................................................................CTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGG..................................19120.0810100000000
.............................................................................................................................................................................................................................................TAGAAGTTTCTACTGCGGT......................................................................................................................................................................................................19120.0810100000000
............................................................................................................................................................................................................................................CTAGAAGTTTCTACTGCGG.......................................................................................................................................................................................................19120.0810100000000
........................................................................................................................................................................................................................................................................................CGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGG..................................22120.0810000000010
........................................................................................................................................................................................................................................................................................CGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGT---------------..................23120.0810000001000
..............................................................................................................................................................................................TAGAAGTTTCTACTGCGGA.....................................................................................................................................................................................................................................................19120.0810100000000
........................................................................................................................................................................................................................................................................................CGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCG...................................21120.0810100000000
.........................................................................................................................................................................................TCGTCTAGAAGTTTCTACTGCGG......................................................................................................................................................................................................................................................23120.0810100000000
..........................................................................................................................................................................................CGTCTAGAAGTTTCTACTGCGGT.....................................................................................................................................................................................................................................................23120.0810000001000
.......................................................................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGG..................................23120.0810100000000
..........................................................................................................................................................................................CGTCTAGAAGTTTCTACTGCG.......................................................................................................................................................................................................................................................21120.0810100000000
.........................................................................................................................................................................................................................................CGTCTAGAAGTTTCTACTGCGG.......................................................................................................................................................................................................22120.0810000000010
........................................................................................................................................................................................................................AAGCGTGCGGGCGGCTTCGTCTAG......................................................................................................................................................................................................................24160.0610100000000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCGTCTAGAA....................................................................................................................................................................................................................27160.0610000000010
........................................................................................................................................................................................................................AAGCGTGCGGGCGGCTTC............................................................................................................................................................................................................................18190.0510000001000
.......................................................................................................................................................................................................................TAAGCGTGCGGGCGGCTTCGTA.........................................................................................................................................................................................................................22190.0510010000000
..........................................................................................................................................................................................CGTCTAGAAGTTTCTACTGC........................................................................................................................................................................................................................................................20200.0510100000000
..............................................................................................................................................................................TGCGGGCGGCTTCGTCTAGAAGTTT...............................................................................................................................................................................................................................................................25200.0510100000000
.........................................................................................................................................................................................TCGTCTAGAAGTTTCTACTGC........................................................................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCA..........................................................................................................................................................................................................................................................................20200.0510000000100
...........................................................................................................................................................................GCGTGCGGGCGGCTTCGTC........................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................................................................GCGTGCGGGCGGCTTCGTC.........................................................................................................................................................................................................................19200.0510100000000
.........................................................................................................................................................................................TCGTCTAGAAGTTTCTACTG.........................................................................................................................................................................................................................................................20200.0510100000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTT...........................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................TGCGTGCGGGCGGCTTCGTCT.......................................................................................................................................................................................................................................................................21200.0510100000000
.......................................................................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTG.....................................20200.0510100000000
...........................................................................................................................................................................GCGTGCGGGCGGCTTCGTCTAGA....................................................................................................................................................................................................................................................................23200.0510100000000
.............................................................................................................................................................................................................................TGCGGGCGGCTTCGTCTAGAAGTTT................................................................................................................................................................................................................25200.0510100000000
..............................................................................................................................................................................TGCGGGCGGCTTCGTCTAGAAGTT................................................................................................................................................................................................................................................................24200.0510100000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCC..........................................................................................................................................................................................................................................................................20200.0510000001000
.............................................................................................................................................................................GTGCGGGCGGCTTCGTCTAGAAG..................................................................................................................................................................................................................................................................23200.0510100000000
............................................................................................................................................................................................................................GTGCGGGCGGCTTCGTCTAGAAG...................................................................................................................................................................................................................23200.0510100000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGTCA.......................................................................................................................................................................................................................................................................23200.0510100000000
........................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTACTG..........................................................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................TGCGTGCGGGCGGCTTCGTC........................................................................................................................................................................................................................................................................20200.0510100000000
........................................................................................................................................................................................................................................................................................CGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGC....................................20200.0510100000000
........................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTACTGC.........................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................................TATGCGTGCGGGCGGCTTCGAAA.......................................................................................................................................................................................................................................................................23200.0510100000000
........................................................AAAG------------------------------------------------------------------------------------------------------------TATGCGTGCGGGCGG...............................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................................................................GCGTGCGGGCGGCTTCGTCTAGA.....................................................................................................................................................................................................................23200.0510100000000
.........................................................................................................................................................................................................................................CGTCTAGAAGTTTCTACTGC.........................................................................................................................................................................................................20200.0510100000000
.......................................................................................................................................................................................................................................................................................TCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGC....................................21200.0510100000000
.............................................................................................................................................................................................................................TGCGGGCGGCTTCGTCTAGAAGTT.................................................................................................................................................................................................................24200.0510100000000
droPer2
GCGG-----------T-----------------------------------ACAAAGTATGCGT---------------------------------------------------------------------------------------------------------------GCGGGCGGTTTCGTCTAGAAATTTCTACTGCCGTACAAGGTAAGCGTGCGGGCGGCTTCGTCTAGAAGTTTCTACTGCCGTACAAGGTAAGCGTGCGGGCGGCTTCGTCTAGAAGTTTCTA----------------------------------------------------------------------------------------------------------------------CTGCGGT---------------TCAAA--------GTAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................GAAGTTTCTACTGCCGTACAAGGTA..............................................................................................................................................................................................2570.141010000
GCGG-----------T-----------------------------------ACAAAGTATGCGT---------------------------------------------------------------------------------------------------------------GCGG...................................................................................................................................................................................................................................................................................22200.051010000
droAna3
GATC-----------C-----------------------------------GGCAGG----------------------CGCAAAGTGAAGCGTTCTCCGTAGAAGAGAGAGAGACGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAAAG----------------------------------------------------------------------------------------------------------------------------------------------ATCTCGAAA-------GAAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CGCA-----------G-----------------------------------GGCAGGGAGCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATSizeHit CountTotal NormTotal
No Reads
droFic1
GGAC-----------T-----------------------------------CGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGSizeHit CountTotal NormTotal
No Reads
droEle1
CTCG-----------A-----------------------------------GGAACAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA----------------------------------------------------------------------------------------------------------------------GATC---------------AATTTGAAGGAATGGCGGGAGSizeHit CountTotal NormTotal
No Reads
droRho1
GGGC--GGTCTAAATGCAAATACACCGGA--------TGACAATCAGGATG--------------CAAT-------GGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAC------------------------------------------------------------TCA-----------AGGASizeHit CountTotal NormTotal
No Reads
droBia1
TGGACA-----CGAGGTGAGAATACCGGC------------------------CAGGAACCGACACAAT-------GGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG-CTCGAGGAGAGGCTATCG---------GTAGCAGTCCTACAACAGG---------------AAACA--------GAATASizeHit CountTotal NormTotal
No Reads
droTak1
GTAC-----------C-----------------------------------CGTGTAAA--------------------------------CGTCAAATGCCAGAAAGGACCAAACAGCTCCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAAC---------------AAAGG--------AGCTGSizeHit CountTotal NormTotal
No Reads
droSim2
CGCA-----------G-----------------------------------GGAAGGGAGCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...A-----------G-----------------------------------GGAAGGGAGCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG1790.78700000000007000000
...A-----------G-----------------------------------GGAAGGGAGCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..1590.67600000000006000000
...............G-----------------------------------GGAAGGGAGCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG1690.22200000000002000000
...A-----------G-----------------------------------GGAAGGGAGCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G.1690.22200000000002000000
droSec2
CGCA-----------G-----------------------------------GGAAGGGAGCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AGAGGCCATCGGAATTCA-----------AACCGAGGCCAAAATAACAGCA--------------CT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGGAATGGTAA----------------------------------------------------------------------------------------------------------------------GAGT---------------AGCTCAAA---------ATAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................AGGAATGGTAA----------------------------------------------------------------------------------------------------------------------GAGT---------------AGCTCAAA---------ATA.2620.50100000010000
droEre2
TAAAATCAAAGAGCTGCA-----------GCTGCAGTCCAGGATAAGGATC--------------CGCC-------AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAC--------------------------------------------------------------------------CCACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:08 PM