dmo_350

CDS [Dmoj\GI17548-cds]; CDS [Dmoj\GI17548-cds]; exon [dmoj_GLEANR_235:1]; exon [dmoj_GLEANR_235:2]; intron [Dmoj\GI17548-in]

##################################################-----------------------------------------------------------------------------################################################## CAGAAGTGGAGCAGTGGAGCATGTCGAGGAGTTCCGATGAGGAATTCCAAGTGGAGGACGCGAACCCTGAGGAGGATGCTACCGCAGACCCTATTCCCCAACGCCGAACTGGCGCCGACGTTGAGAGGGACCAGCAGCCGGAATCCGTCAGGATCTCGTTGCGATATACGCCGGGCA ****************************************************....((((...((((.(((((.(((....)))..))....))).))..........)))).))..********************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M046 female body	V110 male body	M060 embryo	V041 embryo	V056 head
.................AGCATGTCGAGGAGTTCCGATGA.........................................................................................................................................	23	0	11	1.36	15	14	1	0	0	0
.................AGCATGTCGAGGAGTTCCGATGAGGA......................................................................................................................................	26	0	10	1.00	10	8	2	0	0	0
.................AGCATGTCGAGGAGTTCCGATG..........................................................................................................................................	22	0	11	0.64	7	4	2	0	0	1
.................AGCATGTCGAGGAGTTCCGATGAG........................................................................................................................................	24	0	11	0.64	7	2	4	0	1	0
......................................................AGGACGCGAACCCTGAGGAGGATGCTA................................................................................................	27	0	6	0.50	3	1	2	0	0	0
.................AGCATGTCGAGGAGTTCCGATGAGGAA.....................................................................................................................................	27	0	10	0.50	5	4	1	0	0	0
......................................................AGGACGCGAACCCTGAGGAGGATGC..................................................................................................	25	0	6	0.50	3	2	1	0	0	0
......................................................AGGACGCGAACCCTGAGGAGGA.....................................................................................................	22	0	8	0.50	4	4	0	0	0	0
.................AGCATGTCGAGGAGTTCCGATGAGG.......................................................................................................................................	25	0	10	0.30	3	3	0	0	0	0
..................................................................................................................CCGACGTTGAGAGGGACCAGCAGC.......................................	24	0	20	0.25	5	4	0	0	1	0
........................................................................AGGATGCTACCGCAGACCCTATTCCCC..............................................................................	27	0	6	0.17	1	1	0	0	0	0
.......................................................GGACGCGAACCCTGAGGAGGATGC..................................................................................................	24	0	6	0.17	1	1	0	0	0	0
...........................................................GCGAACCCTGAGTAGGATGCTACCGCA...........................................................................................	27	1	6	0.17	1	1	0	0	0	0
......................................................AGGACGCGAACCCTGAGGAGGATG...................................................................................................	24	0	6	0.17	1	1	0	0	0	0
.......................................AGGAATTCCAAGTGGAGGACGCGA..................................................................................................................	24	0	12	0.17	2	2	0	0	0	0
......................................................AGGACGCGAACCCTGAGGAGGATGCTAC...............................................................................................	28	0	6	0.17	1	1	0	0	0	0
......................................................AGCACGCGAACCCTGAGGAGG......................................................................................................	21	1	8	0.13	1	0	0	1	0	0
......................................................AGGACGCGAACCCTGAGGAGG......................................................................................................	21	0	8	0.13	1	1	0	0	0	0
......TTAAGCAGTGGAGCATGT.........................................................................................................................................................	18	2	9	0.11	1	0	1	0	0	0
..................GCATGTCGAGGAGTTCCGATGAGG.......................................................................................................................................	24	0	10	0.10	1	1	0	0	0	0
...............................................................................................................................................TCCGTCAGGATCTCGTTGCGATATAC........	26	0	20	0.10	2	2	0	0	0	0
..................GCATGTCGAGGAGTTCCGATGAGGAA.....................................................................................................................................	26	0	10	0.10	1	1	0	0	0	0
.................AGCATGTCGAGAAGTTCCGATGAGGA......................................................................................................................................	26	1	10	0.10	1	0	1	0	0	0
..............................................................................................................................................................TTGCGATATACGCCGGGC.	18	0	20	0.10	2	2	0	0	0	0
.................AGCATGTCGAGGAGTTCCGATGAGGATC....................................................................................................................................	28	2	10	0.10	1	1	0	0	0	0
....................................................................................................................................AGCAGCCGGAATCCGTCAGGATC......................	23	0	20	0.10	2	0	2	0	0	0
........................................GGAATTCCAAGTGGAGGACGCGAACCC..............................................................................................................	27	0	11	0.09	1	1	0	0	0	0
.................AGCATGTCGAGGAGTTCCGA............................................................................................................................................	20	0	11	0.09	1	1	0	0	0	0
.................AGCATGTCGAGGAGTTCCG.............................................................................................................................................	19	0	11	0.09	1	1	0	0	0	0
..................GCATGTCGAGGAGTTCCGATG..........................................................................................................................................	21	0	11	0.09	1	1	0	0	0	0
.......................................AGGAATTCCAAGTGGAGGACGCGAA.................................................................................................................	25	0	12	0.08	1	1	0	0	0	0
...................................GATGAGGAATTCCAAGTGGAGG........................................................................................................................	22	0	12	0.08	1	1	0	0	0	0
.................AGCTTGTCGAGGAGTTCCGATG..........................................................................................................................................	22	1	14	0.07	1	0	0	1	0	0
..............................................................................................TCCCCAACGCCGAACTGGCGCCGAC..........................................................	25	0	20	0.05	1	1	0	0	0	0
........................................................................................................................................GTCGGAATCCGTGAGGACC......................	19	3	20	0.05	1	1	0	0	0	0
.........................................................................................................................................................TCTCGTTGCGATATACGCCGGG..	22	0	20	0.05	1	1	0	0	0	0
..............................................................................................................................................................TTGCGATATACGCCGGGCA	19	0	20	0.05	1	0	0	1	0	0
..................................................................................................................CCCACGTTGAGAGGGACCAGC..........................................	21	1	20	0.05	1	0	0	1	0	0
..................................................................................................................CCGACTTTGAGAGGGACCAGCAGCC......................................	25	1	20	0.05	1	0	0	1	0	0
.............................................................................................................TGGCGCCGACGTTGAGAGGGACCAGCA.........................................	27	0	20	0.05	1	1	0	0	0	0
..................................................................................................................CCGACGTTGAGAGGGACCAG...........................................	20	0	20	0.05	1	0	0	0	1	0
..................................................................................................................CCGACGTTGAGAGGGACCAGC..........................................	21	0	20	0.05	1	0	1	0	0	0

##################################################-----------------------------------------------------------------------------##################################################
CAGAAGTGGAGCAGTGGAGCATGTCGAGGAGTTCCGATGAGGAATTCCAAGTGGAGGACGCGAACCCTGAGGAGGATGCTACCGCAGACCCTATTCCCCAACGCCGAACTGGCGCCGACGTTGAGAGGGACCAGCAGCCGGAATCCGTCAGGATCTCGTTGCGATATACGCCGGGCA
******************************************************....((((...((((.(((((.(((....)))..))....))).))..........)))).))..**********************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M046
female body

V110
male body

M060
embryo

V041
embryo

V056
head

.................AGCATGTCGAGGAGTTCCGATGA.........................................................................................................................................

1.36

.................AGCATGTCGAGGAGTTCCGATGAGGA......................................................................................................................................

1.00

.................AGCATGTCGAGGAGTTCCGATG..........................................................................................................................................

0.64

.................AGCATGTCGAGGAGTTCCGATGAG........................................................................................................................................

0.64

......................................................AGGACGCGAACCCTGAGGAGGATGCTA................................................................................................

0.50

.................AGCATGTCGAGGAGTTCCGATGAGGAA.....................................................................................................................................

0.50

......................................................AGGACGCGAACCCTGAGGAGGATGC..................................................................................................

0.50

......................................................AGGACGCGAACCCTGAGGAGGA.....................................................................................................

0.50

.................AGCATGTCGAGGAGTTCCGATGAGG.......................................................................................................................................

0.30

..................................................................................................................CCGACGTTGAGAGGGACCAGCAGC.......................................

0.25

........................................................................AGGATGCTACCGCAGACCCTATTCCCC..............................................................................

0.17

.......................................................GGACGCGAACCCTGAGGAGGATGC..................................................................................................

0.17

...........................................................GCGAACCCTGAGTAGGATGCTACCGCA...........................................................................................

0.17

......................................................AGGACGCGAACCCTGAGGAGGATG...................................................................................................

0.17

.......................................AGGAATTCCAAGTGGAGGACGCGA..................................................................................................................

0.17

......................................................AGGACGCGAACCCTGAGGAGGATGCTAC...............................................................................................

0.17

......................................................AGCACGCGAACCCTGAGGAGG......................................................................................................

0.13

......................................................AGGACGCGAACCCTGAGGAGG......................................................................................................

0.13

......TTAAGCAGTGGAGCATGT.........................................................................................................................................................

0.11

..................GCATGTCGAGGAGTTCCGATGAGG.......................................................................................................................................

0.10

...............................................................................................................................................TCCGTCAGGATCTCGTTGCGATATAC........

0.10

..................GCATGTCGAGGAGTTCCGATGAGGAA.....................................................................................................................................

0.10

.................AGCATGTCGAGAAGTTCCGATGAGGA......................................................................................................................................

0.10

..............................................................................................................................................................TTGCGATATACGCCGGGC.

0.10

.................AGCATGTCGAGGAGTTCCGATGAGGATC....................................................................................................................................

0.10

....................................................................................................................................AGCAGCCGGAATCCGTCAGGATC......................

0.10

........................................GGAATTCCAAGTGGAGGACGCGAACCC..............................................................................................................

0.09

.................AGCATGTCGAGGAGTTCCGA............................................................................................................................................

0.09

.................AGCATGTCGAGGAGTTCCG.............................................................................................................................................

0.09

..................GCATGTCGAGGAGTTCCGATG..........................................................................................................................................

0.09

.......................................AGGAATTCCAAGTGGAGGACGCGAA.................................................................................................................

0.08

...................................GATGAGGAATTCCAAGTGGAGG........................................................................................................................

0.08

.................AGCTTGTCGAGGAGTTCCGATG..........................................................................................................................................

0.07

..............................................................................................TCCCCAACGCCGAACTGGCGCCGAC..........................................................

0.05

........................................................................................................................................GTCGGAATCCGTGAGGACC......................

0.05

.........................................................................................................................................................TCTCGTTGCGATATACGCCGGG..

0.05

..............................................................................................................................................................TTGCGATATACGCCGGGCA

0.05

..................................................................................................................CCCACGTTGAGAGGGACCAGC..........................................

0.05

..................................................................................................................CCGACTTTGAGAGGGACCAGCAGCC......................................

0.05

.............................................................................................................TGGCGCCGACGTTGAGAGGGACCAGCA.........................................

0.05

..................................................................................................................CCGACGTTGAGAGGGACCAG...........................................

0.05

..................................................................................................................CCGACGTTGAGAGGGACCAGC..........................................

0.05

GTCTTCACCTCGTCACCTCGTACAGCTCCTCAAGGCTACTCCTTAAGGTTCACCTCCTGCGCTTGGGACTCCTCCTACGATGGCGTCTGGGATAAGGGGTTGCGGCTTGACCGCGGCTGCAACTCTCCCTGGTCGTCGGCCTTAGGCAGTCCTAGAGCAACGCTATATGCGGCCCGT ********************************************************....((((...((((.(((((.(((....)))..))....))).))..........)))).))..****************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M046 female body	M060 embryo	V110 male body	V049 head	V041 embryo
.......................................................CCTGCGCTTGGGACTCCTCCTACGAT................................................................................................	26	0	6	4.17	25	13	12	0	0	0
................................................................................................................................................GGCAGTCCTAGAGCAACGCTATAT.........	24	0	20	3.60	72	71	0	1	0	0
...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATAT.........	25	0	20	2.90	58	57	0	0	0	1
........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAACGCT.............	28	0	20	1.30	26	15	11	0	0	0
....................................................................................................TGCGGCTTGACCGCGGCTGCAACT.....................................................	24	0	20	1.00	20	2	18	0	0	0
........................................................CTGCGCTTGGGACTCCTCCTACGAT................................................................................................	25	0	6	1.00	6	3	3	0	0	0
..CTTCACCTCGTCACCTCGTACAGCT......................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0
.....................................ACTCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................	27	0	12	0.92	11	11	0	0	0	0
..............................CAAGGCTACTCCTTAAGGTTCACCT..........................................................................................................................	25	0	12	0.92	11	8	3	0	0	0
.........................................................................................................................................GGCCTTAGGCAGTCCTAGAGCAACGCT.............	27	0	20	0.75	15	14	1	0	0	0
.........................................................................................................................................GGCCTTAGGCAGTCCTAGAGCAACGC..............	26	0	20	0.75	15	13	2	0	0	0
..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATAT.........	26	0	20	0.75	15	0	14	1	0	0
......................................CTCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................	26	0	12	0.58	7	6	1	0	0	0
...................................CTACTCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................	29	0	12	0.42	5	1	4	0	0	0
............................................................................................................................................CTTAGGCAGTCCTAGAGCAACGCTATAT.........	28	0	20	0.40	8	7	1	0	0	0
..........................................................................................................................................GCCTTAGGCAGTCCTAGAGCAACGCT.............	26	0	20	0.40	8	5	3	0	0	0
..............................................................................................................................................CAGGCAGTCCTAGAGCAACGCTATAT.........	26	1	20	0.35	7	0	7	0	0	0
........................................................CTGCGCTTGGGACTCCTCCTACGATG...............................................................................................	26	0	6	0.33	2	1	0	1	0	0
............................................................GCTTGGGACTCCTCCTACGAT................................................................................................	21	0	6	0.33	2	2	0	0	0	0
................................................................................................................................................GGCAGTCCTAGAGCAACGCTATATG........	25	0	20	0.30	6	4	2	0	0	0
.................................GGCTACTCCTTAAGGTTCACCT..........................................................................................................................	22	0	12	0.25	3	3	0	0	0	0
........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAACGC..............	27	0	20	0.20	4	0	4	0	0	0
...................................................................................................TTGCGGCTTGACCGCGGCTGCAACT.....................................................	25	0	20	0.20	4	4	0	0	0	0
.....................................................AACCTGCGCTTGGGACTCCTCCTACGAT................................................................................................	28	2	6	0.17	1	1	0	0	0	0
.......................................................CCTGCGCTTGGGACTCCTCCTACGATG...............................................................................................	27	0	6	0.17	1	1	0	0	0	0
.......................................................ACTGCGCTTGGGACTCCTCCTACGAT................................................................................................	26	1	6	0.17	1	1	0	0	0	0
....................................................................CTCCTCCTACGATGGCGTCTGGGAT....................................................................................	25	0	6	0.17	1	1	0	0	0	0
....................................AACTCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................	28	1	12	0.17	2	1	1	0	0	0
.........................................................TGCGCTTGGGACTCCTCCTACGAT................................................................................................	24	0	6	0.17	1	0	1	0	0	0
.......................................................ACTGCGCTTGGGACTCCTCCTACGA.................................................................................................	25	1	6	0.17	1	1	0	0	0	0
..........................................................GCGCTTGGGACTCCTCCTACGAT................................................................................................	23	0	6	0.17	1	1	0	0	0	0
.....................................................CTCCTGCGCTTGGGACTCCTCCTACGAT................................................................................................	28	0	6	0.17	1	1	0	0	0	0
............................................................................ACGATGGCGTCTGGGATAAGGGGT.............................................................................	24	0	6	0.17	1	1	0	0	0	0
..............................CAAGGCTACTCCTTAAGGTTCACC...........................................................................................................................	24	0	12	0.17	2	2	0	0	0	0
.......................................................CCTGCGCTTGAGACTCCTCCTAC...................................................................................................	23	1	6	0.17	1	1	0	0	0	0
.......................................TCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................	25	0	12	0.17	2	1	1	0	0	0
................................................................................................................................................GGCAGTCCTAGAGCAACGCTATA..........	23	0	20	0.15	3	3	0	0	0	0
.............................................................................................................................................TTAGGCAGTCCTAGAGCAACGCTATAT.........	27	0	20	0.15	3	3	0	0	0	0
.................................................................................GGCGTCTGGGATAAGGGGTTGCGGCT......................................................................	26	0	20	0.15	3	3	0	0	0	0
........................................................................................CGGATAAAGGGTTGCTGCTTG....................................................................	21	3	20	0.15	3	0	0	2	1	0
...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATA..........	24	0	20	0.15	3	3	0	0	0	0
..........................................................................................................................................GCCTTAGGCAGTCCTAGAGCAACGC..............	25	0	20	0.15	3	3	0	0	0	0
...........................................................................................................................................CCTTAGGCAGTCCTAGAGCAACGC..............	24	0	20	0.15	3	1	2	0	0	0
.......................................................CCTGCGCTTGGGACTCCTCCTA....................................................................................................	22	0	8	0.13	1	1	0	0	0	0
............................................AAGGTTCACCTCCTGCGCTTGGGACT...........................................................................................................	26	0	8	0.13	1	1	0	0	0	0
...............................................GTTCACCTCCTGCGCTTGGGACTCCT........................................................................................................	26	0	8	0.13	1	1	0	0	0	0
....................................................................................................TGCGGCTTGACCGCGGCTGCAAGT.....................................................	24	1	20	0.10	2	0	2	0	0	0
................ATTGTACAGCTCCTCAAGGCTACTCCTT.....................................................................................................................................	28	2	10	0.10	1	1	0	0	0	0
.................................................................................................GGTTGCGGCTTGACCGCGGCTGCAACT.....................................................	27	0	20	0.10	2	1	1	0	0	0
............................................................................................................................................CTTAGGCAGTCCTAGAGCAACGCTA............	25	0	20	0.10	2	2	0	0	0	0
....................................................................................................................CTGCAACTCTCCCTGGTCGTCGGCCT...................................	26	0	20	0.10	2	0	2	0	0	0
..................................................................................................................................................CAGTCCTAGAGCAACGCTATATGCG......	25	0	20	0.10	2	0	2	0	0	0
........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAACG...............	26	0	20	0.10	2	2	0	0	0	0
..................................................................................................GTTGCGGCTTGACCGCGGCTGCAACT.....................................................	26	0	20	0.10	2	2	0	0	0	0
......................................................................................................CGGCTTGACCGCGGCTGCAACT.....................................................	22	0	20	0.10	2	1	1	0	0	0
...............................................................................................................................................AGGCAGTCCTAGAGCAACGTTATAT.........	25	1	20	0.10	2	0	1	1	0	0
.................................................................................................................................................GCAGTCCTAGAGCAACGCTATAT.........	23	0	20	0.10	2	1	0	1	0	0
................................................................................................................................................GGCAGTCCTAGAGCAACGCTAT...........	22	0	20	0.10	2	2	0	0	0	0
................................................................................................................................................GGCAGTCCTAGAGCAACGCTATATC........	25	1	20	0.10	2	0	2	0	0	0
.............................TCAAGGCTACTCCTTAAGGTT...............................................................................................................................	21	0	12	0.08	1	0	0	0	1	0
......................................CTCCTTAAGGTTCACCTCCTGCGCGT.................................................................................................................	26	1	12	0.08	1	0	1	0	0	0
........................................CCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................	24	0	12	0.08	1	1	0	0	0	0
............................CTCAAGGCTACTCCTTAAGGTTCACCT..........................................................................................................................	27	0	12	0.08	1	1	0	0	0	0
...................................CTACTCCTTAAGGTTCACCTCCTGCGCGT.................................................................................................................	29	1	12	0.08	1	0	1	0	0	0
....................................TACTCCTTAAGGTTCACCTCCTGCGCGT.................................................................................................................	28	1	12	0.08	1	0	1	0	0	0
..............................CAAGGCTACTCCTTAAGGTTCAACT..........................................................................................................................	25	1	12	0.08	1	0	1	0	0	0
...................................CTACTCCTTAAGGTTCACCTCCTGCCCTT.................................................................................................................	29	1	12	0.08	1	0	1	0	0	0
.............................TCAAGGCTACTCCTTAAGGTTCACCTC.........................................................................................................................	27	0	12	0.08	1	0	1	0	0	0
....................................AACTCCTTAAGGTTCACCTCCTGCGCT..................................................................................................................	27	1	12	0.08	1	1	0	0	0	0
......................CAGCTCCTCAAGGCTACTCCTTA....................................................................................................................................	23	0	12	0.08	1	1	0	0	0	0
...............................AAGGCTACTCCTTAAGGTTCACC...........................................................................................................................	23	0	12	0.08	1	1	0	0	0	0
...................................CTACTCCTTAAGGTTCACCTCCTGCTCGT.................................................................................................................	29	2	12	0.08	1	0	1	0	0	0
.............................TCAAGGCTACTCCTTAAGGTTCACCT..........................................................................................................................	26	0	12	0.08	1	1	0	0	0	0
...............................................................................................................................................AGGCAGTCCTAGAGCAAAGCTATAT.........	25	1	20	0.05	1	0	1	0	0	0
...................................................................................................CTGCGGCTTTACCGCGGCTGCAACT.....................................................	25	2	20	0.05	1	0	0	1	0	0
....................................................................................................TTCGGCTTGACCGCGGCTGCAACT.....................................................	24	1	20	0.05	1	0	1	0	0	0
......................................................................................................................................GTCGGCCTTAGGCAGTCCTAGAGCA..................	25	0	20	0.05	1	1	0	0	0	0
................................................................................................................................................GGCAGTCCTAGAGCAACGCTA............	21	0	20	0.05	1	1	0	0	0	0
...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATATGC.......	27	0	20	0.05	1	1	0	0	0	0
................................................................................................CGGTTGCGGCTTGACCGCGGCTGCAACT.....................................................	28	1	20	0.05	1	1	0	0	0	0
........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAAAGC..............	27	1	20	0.05	1	0	1	0	0	0
..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATAG.........	26	1	20	0.05	1	0	1	0	0	0
...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATCT.........	25	1	20	0.05	1	0	1	0	0	0
...............................................................................................................................................ATGCAGTCCTAGAGCAACGCTATAT.........	25	1	20	0.05	1	0	1	0	0	0
.........................................................................................................CTTGACCGCGGCTGCAACTCTCCCT...............................................	25	0	20	0.05	1	1	0	0	0	0
....................................................................................................TGCGGCTTGACCGCGGCTGCTACT.....................................................	24	1	20	0.05	1	0	1	0	0	0
..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATATC........	27	1	20	0.05	1	1	0	0	0	0
.................................................................................................GGTTGCGGCTTGACCGCGGCTGCAAC......................................................	26	0	20	0.05	1	1	0	0	0	0
...............................................................................................................................................AGGCAGTCCTACAGCAACGCTATAT.........	25	1	20	0.05	1	0	1	0	0	0
.................................................................................................................................................GCAGTCCTAGGGCAACGCTATAT.........	23	1	20	0.05	1	1	0	0	0	0
.................................................................................GGCGTCTGGGATAAGGGGTTGCGGCTT.....................................................................	27	0	20	0.05	1	1	0	0	0	0
..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATTT.........	26	1	20	0.05	1	0	1	0	0	0
...........................................................................................................................................CCTTAGGCAGTCCTAGAGCAACGCTA............	26	0	20	0.05	1	1	0	0	0	0
.............................................................................................................................................TTAGGCAGTCCTAGAGCAACGC..............	22	0	20	0.05	1	0	1	0	0	0
...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTACAT.........	25	1	20	0.05	1	0	1	0	0	0
..................................................................................................................................................CAGTCCTAGAGCAACGCTATATG........	23	0	20	0.05	1	0	1	0	0	0
.................................................................................................................................................GCAGTCCTAGAGCAACGCTATA..........	22	0	20	0.05	1	1	0	0	0	0
.....................................................................................................................................................TCCTAGAGCAACGCTATATG........	20	0	20	0.05	1	1	0	0	0	0
...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATTT.........	25	1	20	0.05	1	0	1	0	0	0
..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTAT...........	24	0	20	0.05	1	1	0	0	0	0
........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCATCGC..............	27	1	20	0.05	1	0	1	0	0	0
..................................................................................................................................GGTCGTCGGCCTTAGGCAGTCCT........................	23	0	20	0.05	1	1	0	0	0	0
............................................................................................................................CTCCCTGGTCGTCGGCCTTAGGCAGTCCT........................	29	0	20	0.05	1	1	0	0	0	0
..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTA............	23	0	20	0.05	1	1	0	0	0	0
.........................................................................................................................................GGCCTTAGGCAGTCCTAGAGCAACGCTA............	28	0	20	0.05	1	1	0	0	0	0
........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAACTC..............	27	1	20	0.05	1	0	1	0	0	0
.............................................................................................................................................CTAGGCAGTCCTAGAGCAACGCTATAT.........	27	1	20	0.05	1	1	0	0	0	0
............................................................................................................................................CTTAGGCAGTCCTAGAGCAACGCTATATT........	29	1	20	0.05	1	1	0	0	0	0
..............................................................................................................................CCCTGGTCGTCGGCCTTAGGCAGTCC.........................	26	0	20	0.05	1	1	0	0	0	0
.........................................................................................................................................TGCCTTAGGCAGTCCTAGAGCAACGCT.............	27	1	20	0.05	1	0	1	0	0	0
............................................................................................................................................TTTAGGCAGTCCTAGAGCAACGCTATAT.........	28	1	20	0.05	1	0	1	0	0	0
............................................................................................................................................ATAAGGCAGTCCTAGAGCAACGCTATAT.........	28	2	20	0.05	1	1	0	0	0	0
.......................................................................................................................................TCGGCCTTAGGCAGTCCTAGAGCAACGC..............	28	0	20	0.05	1	1	0	0	0	0
...........................................................................................................................................CCTTAGGCAGTCCTAGAGCAACG...............	23	0	20	0.05	1	0	1	0	0	0
................................................................................................................................................GGCAGTCCTAGAGCAACGCTATAGG........	25	1	20	0.05	1	0	1	0	0	0
.................................................................................................................................CGGTCGTCGGCCTTAGGCAGTCCTA.......................	25	1	20	0.05	1	0	1	0	0	0
..............................................................................................................................CCCTGGTCGTCGGCCTTAGGCAGTCCT........................	27	0	20	0.05	1	1	0	0	0	0
.................................................................................................................................................GCAGTCCTAGAACAACGCTATAT.........	23	1	20	0.05	1	0	0	1	0	0
...................................................................................................CTGCGGCTTGACCGCGGCTGCAACT.....................................................	25	1	20	0.05	1	1	0	0	0	0
.................................................................................................................................TGGTCGTCGGCCTTAGGCAGTCCT........................	24	0	20	0.05	1	0	1	0	0	0
................................................................................................................................................GGCAGTCCTAGAGCAACGCTATATGCG......	27	0	20	0.05	1	1	0	0	0	0
....................................................................................................TGCGGCTTGACCGCGGCTGCAACTC....................................................	25	0	20	0.05	1	1	0	0	0	0
..............................................................................................................................................TAGGCAGTCCTAGAGCAAC................	19	0	20	0.05	1	1	0	0	0	0
...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATATT........	26	1	20	0.05	1	1	0	0	0	0
...............................................................................................................................................CGGCAGTCCTAGAGCAACGCTATAT.........	25	1	20	0.05	1	1	0	0	0	0
...............................................................................................................................CCTGGTCGTCGGCCTTAGGCATT...........................	23	1	20	0.05	1	0	1	0	0	0
.........................................................................................................................................GGCCTTAGGCAGTCCTAGAGCAACGCTT............	28	1	20	0.05	1	1	0	0	0	0
..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATATG........	27	0	20	0.05	1	1	0	0	0	0
.................................................................................................................CGGCTGCAACTCTCCCTGGTCGT.........................................	23	0	20	0.05	1	0	0	0	0	1
..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATA..........	25	0	20	0.05	1	0	1	0	0	0
..................................................................................................................................................CAGTCCTAGAGCAACGCTACAT.........	22	1	20	0.05	1	0	1	0	0	0
...........................................................................................................................................CCTTAGGCAGTCCTAGAGCAACGCTATAT.........	29	0	20	0.05	1	0	1	0	0	0

GTCTTCACCTCGTCACCTCGTACAGCTCCTCAAGGCTACTCCTTAAGGTTCACCTCCTGCGCTTGGGACTCCTCCTACGATGGCGTCTGGGATAAGGGGTTGCGGCTTGACCGCGGCTGCAACTCTCCCTGGTCGTCGGCCTTAGGCAGTCCTAGAGCAACGCTATATGCGGCCCGT
**********************************************************....((((...((((.(((((.(((....)))..))....))).))..........)))).))..******************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M046
female body

M060
embryo

V110
male body

V049
head

V041
embryo

.......................................................CCTGCGCTTGGGACTCCTCCTACGAT................................................................................................

4.17

................................................................................................................................................GGCAGTCCTAGAGCAACGCTATAT.........

3.60

...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATAT.........

2.90

........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAACGCT.............

1.30

....................................................................................................TGCGGCTTGACCGCGGCTGCAACT.....................................................

1.00

........................................................CTGCGCTTGGGACTCCTCCTACGAT................................................................................................

1.00

..CTTCACCTCGTCACCTCGTACAGCT......................................................................................................................................................

1.00

.....................................ACTCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................

0.92

..............................CAAGGCTACTCCTTAAGGTTCACCT..........................................................................................................................

0.92

.........................................................................................................................................GGCCTTAGGCAGTCCTAGAGCAACGCT.............

0.75

.........................................................................................................................................GGCCTTAGGCAGTCCTAGAGCAACGC..............

0.75

..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATAT.........

0.75

......................................CTCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................

0.58

...................................CTACTCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................

0.42

............................................................................................................................................CTTAGGCAGTCCTAGAGCAACGCTATAT.........

0.40

..........................................................................................................................................GCCTTAGGCAGTCCTAGAGCAACGCT.............

0.40

..............................................................................................................................................CAGGCAGTCCTAGAGCAACGCTATAT.........

0.35

........................................................CTGCGCTTGGGACTCCTCCTACGATG...............................................................................................

0.33

............................................................GCTTGGGACTCCTCCTACGAT................................................................................................

0.33

................................................................................................................................................GGCAGTCCTAGAGCAACGCTATATG........

0.30

.................................GGCTACTCCTTAAGGTTCACCT..........................................................................................................................

0.25

........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAACGC..............

0.20

...................................................................................................TTGCGGCTTGACCGCGGCTGCAACT.....................................................

0.20

.....................................................AACCTGCGCTTGGGACTCCTCCTACGAT................................................................................................

0.17

.......................................................CCTGCGCTTGGGACTCCTCCTACGATG...............................................................................................

0.17

.......................................................ACTGCGCTTGGGACTCCTCCTACGAT................................................................................................

0.17

....................................................................CTCCTCCTACGATGGCGTCTGGGAT....................................................................................

0.17

....................................AACTCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................

0.17

.........................................................TGCGCTTGGGACTCCTCCTACGAT................................................................................................

0.17

.......................................................ACTGCGCTTGGGACTCCTCCTACGA.................................................................................................

0.17

..........................................................GCGCTTGGGACTCCTCCTACGAT................................................................................................

0.17

.....................................................CTCCTGCGCTTGGGACTCCTCCTACGAT................................................................................................

0.17

............................................................................ACGATGGCGTCTGGGATAAGGGGT.............................................................................

0.17

..............................CAAGGCTACTCCTTAAGGTTCACC...........................................................................................................................

0.17

.......................................................CCTGCGCTTGAGACTCCTCCTAC...................................................................................................

0.17

.......................................TCCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................

0.17

................................................................................................................................................GGCAGTCCTAGAGCAACGCTATA..........

0.15

.............................................................................................................................................TTAGGCAGTCCTAGAGCAACGCTATAT.........

0.15

.................................................................................GGCGTCTGGGATAAGGGGTTGCGGCT......................................................................

0.15

........................................................................................CGGATAAAGGGTTGCTGCTTG....................................................................

0.15

...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATA..........

0.15

..........................................................................................................................................GCCTTAGGCAGTCCTAGAGCAACGC..............

0.15

...........................................................................................................................................CCTTAGGCAGTCCTAGAGCAACGC..............

0.15

.......................................................CCTGCGCTTGGGACTCCTCCTA....................................................................................................

0.13

............................................AAGGTTCACCTCCTGCGCTTGGGACT...........................................................................................................

0.13

...............................................GTTCACCTCCTGCGCTTGGGACTCCT........................................................................................................

0.13

....................................................................................................TGCGGCTTGACCGCGGCTGCAAGT.....................................................

0.10

................ATTGTACAGCTCCTCAAGGCTACTCCTT.....................................................................................................................................

0.10

.................................................................................................GGTTGCGGCTTGACCGCGGCTGCAACT.....................................................

0.10

............................................................................................................................................CTTAGGCAGTCCTAGAGCAACGCTA............

0.10

....................................................................................................................CTGCAACTCTCCCTGGTCGTCGGCCT...................................

0.10

..................................................................................................................................................CAGTCCTAGAGCAACGCTATATGCG......

0.10

........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAACG...............

0.10

..................................................................................................GTTGCGGCTTGACCGCGGCTGCAACT.....................................................

0.10

......................................................................................................CGGCTTGACCGCGGCTGCAACT.....................................................

0.10

...............................................................................................................................................AGGCAGTCCTAGAGCAACGTTATAT.........

0.10

.................................................................................................................................................GCAGTCCTAGAGCAACGCTATAT.........

0.10

................................................................................................................................................GGCAGTCCTAGAGCAACGCTAT...........

0.10

................................................................................................................................................GGCAGTCCTAGAGCAACGCTATATC........

0.10

.............................TCAAGGCTACTCCTTAAGGTT...............................................................................................................................

0.08

......................................CTCCTTAAGGTTCACCTCCTGCGCGT.................................................................................................................

0.08

........................................CCTTAAGGTTCACCTCCTGCGCTT.................................................................................................................

0.08

............................CTCAAGGCTACTCCTTAAGGTTCACCT..........................................................................................................................

0.08

...................................CTACTCCTTAAGGTTCACCTCCTGCGCGT.................................................................................................................

0.08

....................................TACTCCTTAAGGTTCACCTCCTGCGCGT.................................................................................................................

0.08

..............................CAAGGCTACTCCTTAAGGTTCAACT..........................................................................................................................

0.08

...................................CTACTCCTTAAGGTTCACCTCCTGCCCTT.................................................................................................................

0.08

.............................TCAAGGCTACTCCTTAAGGTTCACCTC.........................................................................................................................

0.08

....................................AACTCCTTAAGGTTCACCTCCTGCGCT..................................................................................................................

0.08

......................CAGCTCCTCAAGGCTACTCCTTA....................................................................................................................................

0.08

...............................AAGGCTACTCCTTAAGGTTCACC...........................................................................................................................

0.08

...................................CTACTCCTTAAGGTTCACCTCCTGCTCGT.................................................................................................................

0.08

.............................TCAAGGCTACTCCTTAAGGTTCACCT..........................................................................................................................

0.08

...............................................................................................................................................AGGCAGTCCTAGAGCAAAGCTATAT.........

0.05

...................................................................................................CTGCGGCTTTACCGCGGCTGCAACT.....................................................

0.05

....................................................................................................TTCGGCTTGACCGCGGCTGCAACT.....................................................

0.05

......................................................................................................................................GTCGGCCTTAGGCAGTCCTAGAGCA..................

0.05

................................................................................................................................................GGCAGTCCTAGAGCAACGCTA............

0.05

...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATATGC.......

0.05

................................................................................................CGGTTGCGGCTTGACCGCGGCTGCAACT.....................................................

0.05

........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAAAGC..............

0.05

..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATAG.........

0.05

...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATCT.........

0.05

...............................................................................................................................................ATGCAGTCCTAGAGCAACGCTATAT.........

0.05

.........................................................................................................CTTGACCGCGGCTGCAACTCTCCCT...............................................

0.05

....................................................................................................TGCGGCTTGACCGCGGCTGCTACT.....................................................

0.05

..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATATC........

0.05

.................................................................................................GGTTGCGGCTTGACCGCGGCTGCAAC......................................................

0.05

...............................................................................................................................................AGGCAGTCCTACAGCAACGCTATAT.........

0.05

.................................................................................................................................................GCAGTCCTAGGGCAACGCTATAT.........

0.05

.................................................................................GGCGTCTGGGATAAGGGGTTGCGGCTT.....................................................................

0.05

..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATTT.........

0.05

...........................................................................................................................................CCTTAGGCAGTCCTAGAGCAACGCTA............

0.05

.............................................................................................................................................TTAGGCAGTCCTAGAGCAACGC..............

0.05

...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTACAT.........

0.05

..................................................................................................................................................CAGTCCTAGAGCAACGCTATATG........

0.05

.................................................................................................................................................GCAGTCCTAGAGCAACGCTATA..........

0.05

.....................................................................................................................................................TCCTAGAGCAACGCTATATG........

0.05

...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATTT.........

0.05

..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTAT...........

0.05

........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCATCGC..............

0.05

..................................................................................................................................GGTCGTCGGCCTTAGGCAGTCCT........................

0.05

............................................................................................................................CTCCCTGGTCGTCGGCCTTAGGCAGTCCT........................

0.05

..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTA............

0.05

.........................................................................................................................................GGCCTTAGGCAGTCCTAGAGCAACGCTA............

0.05

........................................................................................................................................CGGCCTTAGGCAGTCCTAGAGCAACTC..............

0.05

.............................................................................................................................................CTAGGCAGTCCTAGAGCAACGCTATAT.........

0.05

............................................................................................................................................CTTAGGCAGTCCTAGAGCAACGCTATATT........

0.05

..............................................................................................................................CCCTGGTCGTCGGCCTTAGGCAGTCC.........................

0.05

.........................................................................................................................................TGCCTTAGGCAGTCCTAGAGCAACGCT.............

0.05

............................................................................................................................................TTTAGGCAGTCCTAGAGCAACGCTATAT.........

0.05

............................................................................................................................................ATAAGGCAGTCCTAGAGCAACGCTATAT.........

0.05

.......................................................................................................................................TCGGCCTTAGGCAGTCCTAGAGCAACGC..............

0.05

...........................................................................................................................................CCTTAGGCAGTCCTAGAGCAACG...............

0.05

................................................................................................................................................GGCAGTCCTAGAGCAACGCTATAGG........

0.05

.................................................................................................................................CGGTCGTCGGCCTTAGGCAGTCCTA.......................

0.05

..............................................................................................................................CCCTGGTCGTCGGCCTTAGGCAGTCCT........................

0.05

.................................................................................................................................................GCAGTCCTAGAACAACGCTATAT.........

0.05

...................................................................................................CTGCGGCTTGACCGCGGCTGCAACT.....................................................

0.05

.................................................................................................................................TGGTCGTCGGCCTTAGGCAGTCCT........................

0.05

................................................................................................................................................GGCAGTCCTAGAGCAACGCTATATGCG......

0.05

....................................................................................................TGCGGCTTGACCGCGGCTGCAACTC....................................................

0.05

..............................................................................................................................................TAGGCAGTCCTAGAGCAAC................

0.05

...............................................................................................................................................AGGCAGTCCTAGAGCAACGCTATATT........

0.05

...............................................................................................................................................CGGCAGTCCTAGAGCAACGCTATAT.........

0.05

...............................................................................................................................CCTGGTCGTCGGCCTTAGGCATT...........................

0.05

.........................................................................................................................................GGCCTTAGGCAGTCCTAGAGCAACGCTT............

0.05

..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATATG........

0.05

.................................................................................................................CGGCTGCAACTCTCCCTGGTCGT.........................................

0.05

..............................................................................................................................................TAGGCAGTCCTAGAGCAACGCTATA..........

0.05

..................................................................................................................................................CAGTCCTAGAGCAACGCTACAT.........

0.05

...........................................................................................................................................CCTTAGGCAGTCCTAGAGCAACGCTATAT.........

0.05

Species	Coordinate	ID	Alignment
droMoj3	scaffold_1986:44-220 -	dmo_350	CAGAAGTGGAGCAGTGGAGCATGTCGAGGAGTTCCGATGAGGAATTCCAAGTGGAGGACGCGAACCCTGAGGAGGATGCTACCGCAGACCCTATTCCCCAACGCCGAACTGGCGCCGACGTTGAGAGGGACCAGCAGCCGGAATCCGTCAGGATCTCGTTGCGATATACGCCGGGCA

Species

Coordinate

Alignment

droMoj3

scaffold_1986:44-220 -

dmo_350

CAGAAGTGGAGCAGTGGAGCATGTCGAGGAGTTCCGATGAGGAATTCCAAGTGGAGGACGCGAACCCTGAGGAGGATGCTACCGCAGACCCTATTCCCCAACGCCGAACTGGCGCCGACGTTGAGAGGGACCAGCAGCCGGAATCCGTCAGGATCTCGTTGCGATATACGCCGGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droMoj3

CAGAAGTGGAGCAGTGGAGCATGTCGAGGAGTTCCGATGAGGAATTCCAAGTGGAGGACGCGAACCCTGAGGAGGATGCTACCGCAGACCCTATTCCCCAACGCCGAACTGGCGCCGACGTTGAGAGGGACCAGCAGCCGGAATCCGTCAGGATCTCGTTGCGATATACGCCGGGCA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.................AGCATGTCGAGGAGTTCCGATGA.........................................................................................................................................	23	11	1.36	15	14	0	0	0	0	1
.................AGCATGTCGAGGAGTTCCGATGAGGA......................................................................................................................................	26	10	1.00	10	8	0	0	0	0	2
.................AGCATGTCGAGGAGTTCCGATG..........................................................................................................................................	22	11	0.64	7	4	0	0	1	0	2
.................AGCATGTCGAGGAGTTCCGATGAG........................................................................................................................................	24	11	0.64	7	2	1	0	0	0	4
......................................................AGGACGCGAACCCTGAGGAGGATGCTA................................................................................................	27	6	0.50	3	1	0	0	0	0	2
.................AGCATGTCGAGGAGTTCCGATGAGGAA.....................................................................................................................................	27	10	0.50	5	4	0	0	0	0	1
......................................................AGGACGCGAACCCTGAGGAGGATGC..................................................................................................	25	6	0.50	3	2	0	0	0	0	1
......................................................AGGACGCGAACCCTGAGGAGGA.....................................................................................................	22	8	0.50	4	4	0	0	0	0	0
.................AGCATGTCGAGGAGTTCCGATGAGG.......................................................................................................................................	25	10	0.30	3	3	0	0	0	0	0
..................................................................................................................CCGACGTTGAGAGGGACCAGCAGC.......................................	24	20	0.25	5	4	1	0	0	0	0
........................................................................AGGATGCTACCGCAGACCCTATTCCCC..............................................................................	27	6	0.17	1	1	0	0	0	0	0
.......................................................GGACGCGAACCCTGAGGAGGATGC..................................................................................................	24	6	0.17	1	1	0	0	0	0	0
......................................................AGGACGCGAACCCTGAGGAGGATG...................................................................................................	24	6	0.17	1	1	0	0	0	0	0
.......................................AGGAATTCCAAGTGGAGGACGCGA..................................................................................................................	24	12	0.17	2	2	0	0	0	0	0
......................................................AGGACGCGAACCCTGAGGAGGATGCTAC...............................................................................................	28	6	0.17	1	1	0	0	0	0	0
......................................................AGGACGCGAACCCTGAGGAGG......................................................................................................	21	8	0.13	1	1	0	0	0	0	0
..................GCATGTCGAGGAGTTCCGATGAGG.......................................................................................................................................	24	10	0.10	1	1	0	0	0	0	0
...............................................................................................................................................TCCGTCAGGATCTCGTTGCGATATAC........	26	20	0.10	2	2	0	0	0	0	0
..................GCATGTCGAGGAGTTCCGATGAGGAA.....................................................................................................................................	26	10	0.10	1	1	0	0	0	0	0
..............................................................................................................................................................TTGCGATATACGCCGGGC.	18	20	0.10	2	2	0	0	0	0	0
.................AGCATGTCGAGGAGTTCCGATGAGGATC....................................................................................................................................	28	10	0.10	1	1	0	0	0	0	0
....................................................................................................................................AGCAGCCGGAATCCGTCAGGATC......................	23	20	0.10	2	0	0	0	0	0	2
........................................GGAATTCCAAGTGGAGGACGCGAACCC..............................................................................................................	27	11	0.09	1	1	0	0	0	0	0
.................AGCATGTCGAGGAGTTCCGA............................................................................................................................................	20	11	0.09	1	1	0	0	0	0	0
.................AGCATGTCGAGGAGTTCCG.............................................................................................................................................	19	11	0.09	1	1	0	0	0	0	0
..................GCATGTCGAGGAGTTCCGATG..........................................................................................................................................	21	11	0.09	1	1	0	0	0	0	0
.......................................AGGAATTCCAAGTGGAGGACGCGAA.................................................................................................................	25	12	0.08	1	1	0	0	0	0	0
...................................GATGAGGAATTCCAAGTGGAGG........................................................................................................................	22	12	0.08	1	1	0	0	0	0	0
..............................................................................................TCCCCAACGCCGAACTGGCGCCGAC..........................................................	25	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................TCTCGTTGCGATATACGCCGGG..	22	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................TTGCGATATACGCCGGGCA	19	20	0.05	1	0	0	0	0	1	0
.............................................................................................................TGGCGCCGACGTTGAGAGGGACCAGCA.........................................	27	20	0.05	1	1	0	0	0	0	0
..................................................................................................................CCGACGTTGAGAGGGACCAG...........................................	20	20	0.05	1	0	1	0	0	0	0
..................................................................................................................CCGACGTTGAGAGGGACCAGC..........................................	21	20	0.05	1	0	0	0	0	0	1

-14.3	-14.0	-13.9	-13.9

dmo_350

scaffold_1986:94-170 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads