ID:

dmo_347

 Coordinate:

scaffold_1700:2240-2433 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.2 -20.8 -20.6

Flybase annnotation

exon [dmoj_GLEANR_15278:2]; CDS [Dmoj\GI14551-cds]; CDS [Dmoj\GI14551-cds]; exon [dmoj_GLEANR_15278:1]; intron [Dmoj\GI14551-in]

Repeatable elements

NameClassFamilyStrand
BEL-11_DTa-I-intLTRPao-
mature
  1. dmo_347  scaffold_1700:2328-2348 -
  2. scaffold_3774:2833-2853 +
  3. scaffold_4182:42-62 +
  4. scaffold_6377:62773-62793 +
  5. scaffold_6406:82927-82947 -
  6. scaffold_6417:42660-42680 +
  7. scaffold_6500:32230511-32230531 -
  8. scaffold_6656:5702-5722 -
  9. scaffold_6838:2699-2719 +
star
  1. dmo_347  scaffold_1700:2244-2271 -
  2. scaffold_3774:2910-2937 +
  3. scaffold_4182:119-146 +
  4. scaffold_5889:2789-2816 +
  5. scaffold_6377:62850-62877 +
  6. scaffold_6406:82843-82870 -
  7. scaffold_6417:42737-42764 +
  8. scaffold_6425:58750-58777 -
  9. scaffold_6425:65073-65100 -
  10. scaffold_6500:32230427-32230454 -
  11. scaffold_6656:5618-5645 -
  12. dmo_2614  scaffold_6838:2776-2803 +

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#############################################-----
ACTTGGCTGCACGGGGTCGTCCGGATAATGAGAATAATTTGGAACGTTTGGTACCTTTTTCGTCTAAAGTTGAGAATTTTGTAGTATTTTTACAGCCAGCAAATGCAGTGCAGCATTTGCACAATCCTGTACTTTTGCAGCAACTTGTGGAGAAGCTGCCAATGACGAAACGGATTCAGGGGATAGATTATGCAGCATCTATTCGCCCATATGCAGACTTAAGACACTTCACTGATTGGCTCAGTGGCGTGGCGAGAAGCGTTGCACGAGCAGCAACAACTATAAATAGTCAAA
***************************************************************************************************************************************.....(((...(((((((((((((..(((..............((((((((((........)))))))).)))))..)))).)))......))))))...)))..****************************************************** 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M046
female body
 M060
embryo
 V041
embryo
 V049
head
.......................................................................................................................................TGCAGCAACTTGTGGAGAAGC.......................................................................................................................................... 21 0 9 0.33 3 1 0 2 0 0
....................................................................................................................................................................................................................GCAGACTTAAGACACTTCACTGATTGGC...................................................... 28 0 12 0.33 4 0 2 2 0 0
..............................................................................................................................................................................................................................................................AGAAGCGTTGCACGAGCAGCA................... 21 0 9 0.33 3 3 0 0 0 0
....................................................................................................................................................................................................................GCAGACTTAAGACACTTCACTGATTGG....................................................... 27 0 12 0.25 3 0 3 0 0 0
...........................................................................................................................................................................................................................................TTGGCTCAGTGGCGTGGCG........................................ 19 0 11 0.18 2 2 0 0 0 0
....................................ATTTGGAACGTTTGGTACCT.............................................................................................................................................................................................................................................. 20 0 6 0.17 1 0 1 0 0 0
....................................................................................................................................................................................................................GCAGACTTAAGACACTTCACTGA........................................................... 23 0 12 0.17 2 0 1 1 0 0
....................................................................................................................................................................................GGATAGATTATGCAGCATCTA............................................................................................. 21 0 6 0.17 1 1 0 0 0 0
.............................GAGTATAATTTGGAACGTTTGGTACC............................................................................................................................................................................................................................................... 26 1 8 0.13 1 0 0 1 0 0
...........................ATGAGAATAATTTGGAACGTTTGG................................................................................................................................................................................................................................................... 24 0 8 0.13 1 0 1 0 0 0
.............................................................................................................................................AACTTGTGGAGAAGCTGCCAA.................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0
.................................................................................................................................TACTTTTGCAGCAACTTGTGGAGAAGC.......................................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0
..................................TAATTTGGAACGTTTGGTACC............................................................................................................................................................................................................................................... 21 0 9 0.11 1 0 0 1 0 0
.............................................................................................................................................AACTTGTGGAGAAGCTGCCAATG.................................................................................................................................. 23 0 9 0.11 1 0 1 0 0 0
............................TGAGAATAATTTGGAACGTTT..................................................................................................................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0
........................................................................................................................................GCAGCAACTTGTGGAGAAGCC......................................................................................................................................... 21 1 9 0.11 1 0 0 1 0 0
...........................ATGAGAATAATTTGGAACGTT...................................................................................................................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0
.................................................................................................................................................................................................................................................CAGTGGCGTGGCGAGAAGCGT................................ 21 0 10 0.10 1 0 1 0 0 0
............................................................................................................................TCCTGTACTTTTGCAGCAACTTGTGGAG.............................................................................................................................................. 28 0 11 0.09 1 0 1 0 0 0
.........................................................................................................................................................................................................................................GATTGGCTCAGTGGCGTGGCG........................................ 21 0 11 0.09 1 1 0 0 0 0
...........................................................................................................................................................................................................................................TTGGCTCAGTGGCGTGGCGAG...................................... 21 0 11 0.09 1 1 0 0 0 0
.......................................................................................................................................................................................................................................CTGATTGGCTCAGTGGCGTGG.......................................... 21 0 11 0.09 1 1 0 0 0 0
...................................................................................................................................CTTTTGCAGCAACTTGTGGAG.............................................................................................................................................. 21 0 11 0.09 1 1 0 0 0 0
....................................................................................................................................................................................................................GCAGACTTAAGACACTTCACTGATTG........................................................ 26 0 12 0.08 1 0 1 0 0 0
........................................................................................................................................................................................................................ACTTAAGACACTTCGCTGATTGG....................................................... 23 1 13 0.08 1 0 1 0 0 0
......................................................................................................................................................................................................................AGACTTAAGACACTTCACTGATT......................................................... 23 0 13 0.08 1 0 1 0 0 0
................................................................................................................................................................................................................................CACTTCACTGATTGGCTCAG.................................................. 20 0 13 0.08 1 1 0 0 0 0
........................................................................................................................................................................................................................ACTTAAGACACTTCACTGATTGGCTC.................................................... 26 0 13 0.08 1 0 1 0 0 0
........................................................................................................................................................................................................................ACTTAAGACACTTCACTGATTGG....................................................... 23 0 13 0.08 1 0 1 0 0 0
.....................................................................................................................................................................................................................CGGACTTAAGACACTTCACTGATTGGC...................................................... 27 1 13 0.08 1 0 0 1 0 0
....................................................................................................................................TATTGCAGCAAGTTGTGGGGA............................................................................................................................................. 21 3 14 0.07 1 0 0 0 1 0
..........................................................................................................................................AGAAACTTGTGAAGAAGCT......................................................................................................................................... 19 2 15 0.07 1 0 0 0 1 0
...........................................................................................................................................................................................................................................TTGGCGGACTGGCGTGGCGA....................................... 20 3 16 0.06 1 0 0 0 0 1
......CTGCACGCGGTAGTCCCG.............................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

TGAACCGACGTGCCCCAGCAGGCCTATTACTCTTATTAAACCTTGCAAACCATGGAAAAAGCAGATTTCAACTCTTAAAACATCATAAAAATGTCGGTCGTTTACGTCACGTCGTAAACGTGTTAGGACATGAAAACGTCGTTGAACACCTCTTCGACGGTTACTGCTTTGCCTAAGTCCCCTATCTAATACGTCGTAGATAAGCGGGTATACGTCTGAATTCTGTGAAGTGACTAACCGAGTCACCGCACCGCTCTTCGCAACGTGCTCGTCGTTGTTGATATTTATCAGTTT
******************************************************.....(((...(((((((((((((..(((..............((((((((((........)))))))).)))))..)))).)))......))))))...)))..*************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V041
embryo
...................................................................................................................................................................................................GTAGATAAGCGGGTATACGTCTGAAT......................................................................... 26 0 13 0.54 7 5 1 0 1
...............................................................................................................................................................................................................................CGTGAAGCGACTAACCAAG.................................................... 19 3 20 0.45 9 9 0 0 0
.............................................................................................................................................................................................................................................................................CGTCGTTGTTGATATTTATCAGTTT 25 0 9 0.44 4 4 0 0 0
...........................................TGCAAACCATGGAAAAAGCAGATTT.................................................................................................................................................................................................................................. 25 0 6 0.33 2 1 1 0 0
.........................................................................................................................................................TCGACGGTTACTGCTTTGCCT........................................................................................................................ 21 0 10 0.30 3 0 1 2 0
..............................................................................................................................................................................................................................CCGTGAAGCGACTAACCAAG.................................................... 20 3 15 0.27 4 2 2 0 0
...................................................................................................................................................................................................................ACGTCTGAATTCTGTGAAGTG.............................................................. 21 0 12 0.25 3 0 3 0 0
........................................................................................................................................................................................................................................................................GTGCTCGTCGTTGTTGATA........... 19 0 10 0.20 2 0 2 0 0
..............................................................................................................................................................................................ACGTCGTAGATAAGCGGGTATACGTCT............................................................................. 27 0 12 0.17 2 2 0 0 0
.........................................................................................................................................................................................................AAGCGGGTATACGTCTGAATTCTGT.................................................................... 25 0 12 0.17 2 2 0 0 0
..................................................................................................................................................................................................CGTAGATAAGCGGGTATACGTCTGAAT......................................................................... 27 0 13 0.15 2 1 0 1 0
...............................................................................................................................................................................................................................TGTGAAGTGACTAACCGAGTC.................................................. 21 0 13 0.15 2 0 2 0 0
...............................................................................................................................................GAACACCTCTTCGACGGTTACTGCTTT............................................................................................................................ 27 0 8 0.13 1 1 0 0 0
...............................................................................................................................................................................................................................CGTGAAGCGACTAACCAAGTC.................................................. 21 3 16 0.13 2 2 0 0 0
............................................................................................................................................................................................................................................................................TCGTCGTTGTTGATATTTATCAGTTT 26 0 9 0.11 1 1 0 0 0
...............................................................................................................................................................................................................................................................CTTCGCAACGTGCTCGTCGTT.................. 21 0 9 0.11 1 0 1 0 0
...........................................TGCAAACCATGGCAAAAGCAGATTT.................................................................................................................................................................................................................................. 25 1 9 0.11 1 0 1 0 0
.............................................................................................................................................................................................................................................................................CGTCGTTGTTGATATTTATCAGTGT 25 1 9 0.11 1 0 0 1 0
............................................................................................................................................GTTGAACACCTCTTCGACGGTTACT................................................................................................................................. 25 0 9 0.11 1 0 0 1 0
.....................................................................................................................................................................................................................................................................AACGTGCTCGTCGTTGTTGA............. 20 0 9 0.11 1 1 0 0 0
...............................................................................................................................................GAACACCTCTTCGACGGTTACTGCT.............................................................................................................................. 25 0 9 0.11 1 1 0 0 0
.....................................................................................................................................................................................................................................................................AACGTGCTCGTCGTTGTTGATA........... 22 0 9 0.11 1 1 0 0 0
........................................................................................................................................................TTCGACGGTTACTGCTTTGCCTAAGT.................................................................................................................... 26 0 9 0.11 1 1 0 0 0
.........................................................................................................................................................................................................................................................................TGCTCGTCGTTGTTGATATTTATCAGT.. 27 0 9 0.11 1 1 0 0 0
............................................................................................................................................................................................................................................................................CCGTCGTTGTTGATATTTATCAGTT. 25 1 9 0.11 1 0 0 1 0
......................................................................................................................................................................................................................................................................ACGTGCTCGTCGTTGTTGATATT......... 23 0 9 0.11 1 0 1 0 0
.....................................................................................................................................................................................................................................................................AACGTGCTCGTCGTTGTTGATATT......... 24 0 9 0.11 1 0 1 0 0
.....................................................................................................................................................................................................................................................................AACGTGCTCGTCGTTGTTGAT............ 21 0 9 0.11 1 0 1 0 0
..........................................................................................................................................................CGACGGTTACTGCTTTGCCTA....................................................................................................................... 21 0 10 0.10 1 0 0 1 0
........................................................................................................................................................................................................................................................CACCGCTCTTCGCAACGTGCTCGTC..................... 25 0 10 0.10 1 0 0 1 0
.......................................................................................................................................................................................................................................................................CGTGCTCGTCGTTGTTGATAT.......... 21 0 10 0.10 1 0 1 0 0
....................................................................................................................................................CCTCTTCGACGGTTACTGCTT............................................................................................................................. 21 0 10 0.10 1 0 1 0 0
....................................................................................................................................................................................................................................................ACCGCACCGCTCTTCGCAACGTGCTCGT...................... 28 0 10 0.10 1 1 0 0 0
.......................................................................................................................................................................................................................................................................CGTGCTCGTCGTTGTTGATATGT........ 23 1 10 0.10 1 0 0 1 0
.........................................................................................................................................................................................................................................................................TGCTCGTCGTTGTTGATATTT........ 21 0 10 0.10 1 0 1 0 0
..................................................................................................................................................CACCTCTTCGACGGTTACTGC............................................................................................................................... 21 0 10 0.10 1 0 0 1 0
.............................................................................................................................GGACATGAAAACGTCGTTGAACACCT............................................................................................................................................... 26 0 11 0.09 1 1 0 0 0
.............................................................................................................CGTCGTAAACGTGTTAGGACATGAA................................................................................................................................................................ 25 0 11 0.09 1 1 0 0 0
............................................................................................................ACGTCGTAAACGTGTTAGGACATGAA................................................................................................................................................................ 26 0 11 0.09 1 1 0 0 0
.......................................................................................................................................................................................................................................................GCACCGCTCTTCGCAACGTGCTCGT...................... 25 0 11 0.09 1 1 0 0 0
........................................................................................................................................................................................................................................................CACCGCTCTTCGCAACGTGCT......................... 21 0 11 0.09 1 1 0 0 0
.................................................................................................................................................................................................................................TGAAGCGACTAACCAAGTCAC................................................ 21 2 12 0.08 1 1 0 0 0
..............................................................................................................................................................................................................................CCGTGAAGCGACTAACCAAGTCAC................................................ 24 3 12 0.08 1 1 0 0 0
..................................................................................................................................................................................................................TACGTCTGAATTCTGTGAAGTGACT........................................................... 25 0 12 0.08 1 0 1 0 0
..........................................................................................................................................................................................................AGCGGGTATACGTCTGAATTCTGT.................................................................... 24 0 12 0.08 1 0 1 0 0
.................................................................................................................................................................................................................ATACGTCTGAATTCTGTGAAG................................................................ 21 0 12 0.08 1 0 1 0 0
......................................................................................................................CGTGTTAGGACATGAAAACGT........................................................................................................................................................... 21 0 12 0.08 1 0 0 1 0
................................................................................................................................................................................................GTCGTAGATAAGCGGGTATACGTCT............................................................................. 25 0 12 0.08 1 1 0 0 0
.............................................................................................................................................................................................................GGGTATACGTCTGAATTCTGT.................................................................... 21 0 12 0.08 1 1 0 0 0
....................................................................................................................................................................................................................CGTCTGAATTCTGTGAAGTGA............................................................. 21 0 12 0.08 1 0 1 0 0
............................................................................................................................................................................................................CGGGTATACGTCTGAATTCTGT.................................................................... 22 0 12 0.08 1 0 0 0 1
..................................................................................................................................................................................................................TACGTCTGAATTCTGTGAAGT............................................................... 21 0 12 0.08 1 0 1 0 0
.........................................................................................................................GTTAGGACATGAAAACGTCGTTGAA.................................................................................................................................................... 25 0 12 0.08 1 0 1 0 0
........................................................................................................................................................................................................TAAGCGGGTATACGTCTGAATTCTG..................................................................... 25 0 13 0.08 1 1 0 0 0
..........................................................................................................................................................................................................AGCGGGTATACGTCTGAATTC....................................................................... 21 0 13 0.08 1 0 1 0 0
...........................................................................................................................................................................................................GCGGGTATACGTCTGAATTCT...................................................................... 21 0 13 0.08 1 1 0 0 0
..............................................................................................................................................................................................................................CCGTGAAGCGACTAACCAAGTC.................................................. 22 3 13 0.08 1 1 0 0 0
.....................................................................................................................................................................................................AGATAAGCGGGTATACGTCTGAATT........................................................................ 25 0 13 0.08 1 0 1 0 0
..................................................................................................................................................................................................CGTAGATAAGCGGGTATACGTC.............................................................................. 22 0 13 0.08 1 1 0 0 0
..................................................................................................................................................................................................CGTAGATAAGCGGGTATACGTCTGAATT........................................................................ 28 0 13 0.08 1 1 0 0 0
...................................................................................................................................................................................................GTAGATAAGCGGGTATACGTCTGAATT........................................................................ 27 0 13 0.08 1 1 0 0 0
..................................................................................................................................................................................................CGTAGATAAGCGGGTGTACGTCTGAAT......................................................................... 27 1 13 0.08 1 1 0 0 0
...............................................................................................................................................................................................CGTCGTAGATAAGCGGGTATA.................................................................................. 21 0 13 0.08 1 1 0 0 0
..............................................................................................................................................................................................................................CCGTGAAGCGACTAACCAAGT................................................... 21 3 13 0.08 1 0 1 0 0
....................................................................................................................AACGTCTTTGGACACGAAAA.............................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0
............CCCCAACAGGCCTATTGT........................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 1 0
...............................................................................................................................................................................................................................CGTGAAGCGACTAACCAAGT................................................... 20 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_1700:2190-2483 - dmo_347 ACTTGGCTGCACGGGGTCGT----------CCGGATAATGAGAATAATTTGGAACGTTTGGTACCTTTTTCGTCTAAAGTTGAGAA-TTTTGTAGTATTTTTACAGCCAGCAAATGCAGTGCAGCATTTGCACAATCCTGTACTTTTGCAGCAACTTGTGGAGAAGCTGCCAATGACGAAACGGATTCAGGGGATAGATTATGCAGCATCTATTCGCCCATATGCAGACTTAAGACACTTCACTGATTGGCTCAGTGGCGTGGCGAGAAGCGTTGCACGAGCAGCAACAACTA----T----------------------AAATAGTCAAA
droWil2 scf2_1100000004952:409188-409466 - ---------------------------------------GAGAATAATTTAGAAAGGATGGTTCCATTTGCCACGAAAGTAAAAAAACTTGGTTATATTTTTGCAATCTTCAGAAGCAGTATTACATTTGCAAAATCCATCGTTGCTGGATCAATTAGTTTCAAAAATGCCAATGTCAAAACGCATGCAATGGCAAGAGTTTTCATCCCAAATACATCCATACGCCAATTTGATGCATTTTAGTAATTGGTTAAATAGTATAGCAAGAACGATTGGGAAGGTAACATTAATGA----C---AACTTCGAACAGGGCCAC------TTCAAA
dp5 Unknown_group_492:4030-4203 - ---------------------------------------GAGCACAATCTGGCGAAGATTATTCCCTTTGCAACCCGTGTGAGTAA-TCTCACTGCCTTCTTGCAGTCAGCGAGGGCAGATCAGCATTTGGGGAACCCAACACTTTTGAAGGAGCTTGTGGCCAAACTCCCTACAAGCAAGCGAGTGGAGTGGGCAAGGCATGCTGCAACGATT---------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_70:93664-93837 - ---------------------------------------GAGCACAATCTGGCGAAGATTATTCCCTTTGCAACCCGTGTGAGTAA-TCTCACTGCCTTCTTGCAGTCAGCGAGGGCAGATCAGCATTTGGGGAACCCAACACTTTTGGAAGAGCTTGTGGCCAAACTCCCTACAAGCAAGCGAGTGGAGTGGGCAAGGCATGCTGCAACGATT---------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13250:3361131-3361355 - ---------------------------------------GAACATAATTTGGGAAAGCTCGTTTCATTCTCCACGCATGTGAGTAA-CCTCAAGGCTTTCTTGCAGTCGGCAAAGGCAGAACAGCATTTGTGTAATCCTACCCTCATGGAAGACCTTGTGGCCAAGCTGCCAATAAGTAAACGAGTGAAGTGGGTAAGCTATGCTGCAGCTATTCAGCCCTTTCCGACTATTGTAGACTGAAGTTCGTGGCTGACTGACTTAGCG------------------------------------------------------------------
droBip1 scf7180000394859:11564-11832 + ---------------------------------------GAGCAAAATCTGGAAATGCTCGTCACATTCGCCACGCATGTGAGTAA-TCTAAAGGCCTTCTTGCAGTCAGCAAAGGCAGAGCAGCATTTGTGTAACCCTACCCTTATGGAGAAGCTTGTGGCCAAGCTCCCGATAAGCAACCGAGTGGAGTGGGGAATGCATTTTGCAGCTATCAAGCCCTATTCAACCCTTGTGGATTTCAGTTCGTCGCTGACGGATTTGGCTAATGTGGTCTGCGCGGTAGCAGACATTGGCGTA----------------------AAATAGCCAAA
droKik1 scf7180000302050:16291-16481 + ---------------------------------------G---------------------TTCCCTTCGCAACCCGAGTGAGTAA-CCTCACGGCCTTCTTGCAGTCAGCGAAGGCGGAGCATCACCTGGGGAACCCATCCCTTATGGAGGAGCTTGTGGCAAAGCTTCCTACGAGCAAGCGGATGGATTGGGCCAGGCATGCTGCATCGATCGAGCCCTTTACCACTGTAGCGCACTTCAACGCGTGGCT-------------------------------------------------------------------------------
droEle1 scf7180000486848:4948-5218 - ------------------------------CCGGTTACAGAAAATAATTTAGAAAAGTTGGTCGTATTCGCTTCTTAGGTTGGTAA-CTTGATTATATTTTTGAAATCAGCAAATGCAACTCAGCATTTACAGAATCCTTCTCTGATAGAGAGCTTAGTAGGTAAGATGCCACTCAGTAAGCGAGTTCAATGGATTGAATATTCATCGCCAATTCAGCCATATCCTAATTTAGACCACTTCAGCAATTGGCTGAGCACTATGGCAAGAAGCATTGCA-GGGCAACCATT---G----CAG--C-------------CAGTTAAT------A
droTak1 scf7180000415278:122448-122749 + --TCAGATGAATATGGTTAACCAAATAACGCCGGTAACAGAGAATAACTTAGAAAAGATAGTCTTATTTGCATCTAAGGTTGACAA-TTTAGTTATATTTTTAAAATCAGCCAATGCCACTCAACATTTACAAAATCCAGCCCTGATAGAGAGCCTGGTAGGTAAAATGCCACTCAGTAAGCGGGTTCAATGGATCGAGCATTCATCGCAAATTCAGCTTTATCCAAATTTAGATCACTTCAGCAATTGGCTGAGCACTATGGCAAGAAGCATTGCAAGGGCAACCGTA---T----CAGCAC-------------CGGTAAATA------
droEug1 scf7180000407868:3984-4204 - ------------------------------CCGATTACGGAGCAGAACCTGGCGAGGATCGTTCCCTTCGTAACTAGAGTGAGTAA-CCTCACGGCCTTCTTGCAGTCGGCGAAGGCGGAGCAACATCTGGGAAACCCCACCCTCATGGAGCAGCTTGTGGCAAAGCTTCCCACCAGCAAACGAGTGGATTGGGCCAGGCACGCTGCATCGATCGAGCCCTTCCCCACTGTAGCGCACTTCAGCGTGTGGCT-------------------------------------------------------------------------------
dm3 chrUextra:2359254-2359465 + ---------------------------------------GAGCACAATTTGGCGAAGATCATTCCCTTCGCAACCCGAGTGAGTAA-CCTCGCGGCCTTCTTGCAGTCAGCGAAGGCGGAGCAGCATCTGGGGAACCCAACCCTCATGGAGGAGCTTGTGGCCAAGCTGCCAACGAGCAAGCGAGTAGACTGGGCAAGGCATGCTGCAACGATTGCGCCCTTTCCCACTGTAGTCCACTTCAGCGCGTGGCT-------------------------------------------------------------------------------
droSec2 scaffold_63:137097-137308 + ---------------------------------------GAGCACAATTTGGCGAAGATCATTCCCTTCGCAACCCGAGTGAGTAA-CCTCGCGGCCTTCTTGCAGTTAGCGAAGGCAGAGCAACACCTGGGGAACCCAACCCTCATGGAGGAGCTTGTGGCCAAGCTGCCAACGAGCAAGCGAGTGGACTGGGCCAGGCATGCAGCAACGATTGCGCCCTTTCCCACTGTAGTCCACTTCAGCGCGTGGCT-------------------------------------------------------------------------------
droYak3 2L:21812131-21812401 - ---------------------------------------GAGAATAATTTAAAAAAGCTAGTTTTATTCGCTTCGAAAATAGATAA-TCTAGTAATTTTCTTGAAATCGGCTAGTGCTTCCCAACATTTACAGAATCCGTCGTTGATAGAAAGCTTAGTAGGAAAGATGCTACTTAGCAAACGTATTCAATGGATTGAATATTTATCACAGATACTGTCATAACCCAATTTAGACGACTTCAGCCGTTGGTTAAGTAATATGGCTAGAAGTATAGCAAGGGCCATAGTT---A----CAGATC-------------CAATAAATAATAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACTTGGCTGCACGGGGTCGT----------CCGGATAATGAGAATAATTTGGAACGTTTGGTACCTTTTTCGTCTAAAGTTGAGAA-TTTTGTAGTATTTTTACAGCCAGCAAATGCAGTGCAGCATTTGCACAATCCTGTACTTTTGCAGCAACTTGTGGAGAAGCTGCCAATGACGAAACGGATTCAGGGGATAGATTATGCAGCATCTATTCGCCCATATGCAGACTTAAGACACTTCACTGATTGGCTCAGTGGCGTGGCGAGAAGCGTTGCACGAGCAGCAACAACTA----T----------------------AAATAGTCAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................TGCAGCAACTTGTGGAGAAGC....................................................................................................................................................................2190.333000021
...............................................................................................................................................................................................................................GCAGACTTAAGACACTTCACTGATTGGC................................................................................28120.334200020
.........................................................................................................................................................................................................................................................................AGAAGCGTTGCACGAGCAGCA.............................................2190.333000003
...............................................................................................................................................................................................................................GCAGACTTAAGACACTTCACTGATTGG.................................................................................27120.253300000
......................................................................................................................................................................................................................................................TTGGCTCAGTGGCGTGGCG..................................................................19110.182000002
..............................................ATTTGGAACGTTTGGTACCT.........................................................................................................................................................................................................................................................................2060.171100000
...............................................................................................................................................................................................................................GCAGACTTAAGACACTTCACTGA.....................................................................................23120.172100010
...............................................................................................................................................................................................GGATAGATTATGCAGCATCTA.......................................................................................................................2160.171000001
.....................................ATGAGAATAATTTGGAACGTTTGG..............................................................................................................................................................................................................................................................................2480.131100000
........................................................................................................................................................AACTTGTGGAGAAGCTGCCAA..............................................................................................................................................................2190.111000001
............................................................................................................................................TACTTTTGCAGCAACTTGTGGAGAAGC....................................................................................................................................................................2790.111000001
............................................TAATTTGGAACGTTTGGTACC..........................................................................................................................................................................................................................................................................2190.111000010
........................................................................................................................................................AACTTGTGGAGAAGCTGCCAATG............................................................................................................................................................2390.111100000
......................................TGAGAATAATTTGGAACGTTT................................................................................................................................................................................................................................................................................2190.111000001
...................................................................................................................................................GCAGCAACTTGTGGAGAAGCC...................................................................................................................................................................2190.111000010
.....................................ATGAGAATAATTTGGAACGTT.................................................................................................................................................................................................................................................................................2190.111000001
............................................................................................................................................................................................................................................................CAGTGGCGTGGCGAGAAGCGT..........................................................21100.101100000
.......................................................................................................................................TCCTGTACTTTTGCAGCAACTTGTGGAG........................................................................................................................................................................28110.091100000
....................................................................................................................................................................................................................................................GATTGGCTCAGTGGCGTGGCG..................................................................21110.091000001
......................................................................................................................................................................................................................................................TTGGCTCAGTGGCGTGGCGAG................................................................21110.091000001
..................................................................................................................................................................................................................................................CTGATTGGCTCAGTGGCGTGG....................................................................21110.091000001
..............................................................................................................................................CTTTTGCAGCAACTTGTGGAG........................................................................................................................................................................21110.091000001
...............................................................................................................................................................................................................................GCAGACTTAAGACACTTCACTGATTG..................................................................................26120.081100000
.................................................................................................................................................................................................................................AGACTTAAGACACTTCACTGATT...................................................................................23130.081100000
...........................................................................................................................................................................................................................................CACTTCACTGATTGGCTCAG............................................................................20130.081000001
...................................................................................................................................................................................................................................ACTTAAGACACTTCACTGATTGGCTC..............................................................................26130.081100000
...................................................................................................................................................................................................................................ACTTAAGACACTTCACTGATTGG.................................................................................23130.081100000
droWil2
---------------------------------------GAGAATAATTTAGAAAGGATGGTTCCATTTGCCACGAAAGTAAAAAAACTTGGTTATATTTTTGCAATCTTCAGAAGCAGTATTACATTTGCAAAATCCATCGTTGCTGGATCAATTAGTTTCAAAAATGCCAATGTCAAAACGCATGCAATGGCAAGAGTTTTCATCCCAAATACATCCATACGCCAATTTGATGCATTTTAGTAATTGGTTAAATAGTATAGCAAGAACGATTGGGAAGGTAACATTAATGA----C---AACTTCGAACAGGGCCAC------TTCAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................AATAGTATAGCAAGAACGATTGGG......................................................2422.00404000
.............................................................................................................................................................................................................................................................AATAGTATAGCAAGAACGATTGG.......................................................2321.50303000
............................................................................................................................................................................................................................................................................................CATTAATGA----C---AACTTCGAACAGGGC...............2521.00200020
.........................................................................................................................................................................................................................................................................................................C---AACTTCGAACAGGGCCAC------TTCA..2320.50101000
.............................................................................................................................................................................................................................................................AATAGTATAGCAAGAACGATTGGGA.....................................................2520.50100100
............................................................................................................................................................................................................................................................AAATAGTATAGCAAGAACGATTGG.......................................................2420.50101000
..................................................................................................................................................................................................................................................................TATAGCAAGAACGATTGGGAAGGT.................................................2420.50101000
..........................................................................................................................TACATTTGCAAAATCCATCGTTGCTG.......................................................................................................................................................................................2620.50101000
.........................................................................................................................................................................................................TTCATCCCAAATACATCCATACGC..........................................................................................................2420.50101000
..............................................................................................................................................................................................................................................................ATAGTATAGCAAGAACGATTGGGA.....................................................2420.50101000
...............................................................................................................................................................................................................................................................TAGTATAGCAAGAACGATTGGGA.....................................................2320.50101000
.............................................................................................................................................................................................................................................................AATAGTATAGCAAGAACGATTG........................................................2290.44402020
..............................................................................................................................................................................................TGGCAAGAGTTTTCATCCCAAATACA...................................................................................................................2630.33100010
.........................................................................................................................................................................................................................................................................................TAACATTAATGA----C---AACTTCGAACAGG.................2650.20101000
..........................................................................................................................................................TTAGTTTCAAAAATGCCAATGTCAAAA......................................................................................................................................................2780.13101000
..........................................................................................................................................................TTAGTTTCAAAAATGCCAATGTC..........................................................................................................................................................2380.13100010
..........................................................................................................................................................................................................................................................TTAAATAGTATAGCAAGAACGATTG........................................................2590.11100100
..............................................................................................................................................................................................................................................................ATAGTATAGCAAGAACGATTG........................................................2190.11101000
................................................................................................................................................................TCAAAAATGCCAATGTCAAAACGCA..................................................................................................................................................2590.11101000
dp5
---------------------------------------GAGCACAATCTGGCGAAGATTATTCCCTTTGCAACCCGTGTGAGTAA-TCTCACTGCCTTCTTGCAGTCAGCGAGGGCAGATCAGCATTTGGGGAACCCAACACTTTTGAAGGAGCTTGTGGCCAAACTCCCTACAAGCAAGCGAGTGGAGTGGGCAAGGCATGCTGCAACGATT---------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................TGGGGAACCCAACACTTTTGAAGGAGCA...............................................................................................................................................................................2811.0010100000000
...........................................................................................................................................ACACTTTTGAAGGAGCTTGTGGC.........................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................AAGCAAGCGAGTGGAGTGGG.........................................................................................................................................2060.6740400000000
...................................................................................................CTTGCAGTCAGCGAGGGCAG....................................................................................................................................................................................................................2070.5740400000000
...................................................................................................CTTGCAGTCAGCGAGGGC......................................................................................................................................................................................................................1870.4330300000000
...................................................................................................CTTGCAGTCAGCGAGGGCAGA...................................................................................................................................................................................................................2170.4330300000000
...................................................................................................CTTGCAGTCAGCGAGGGCAGATCA................................................................................................................................................................................................................2470.4330300000000
............................................................................................................................................................TGTGGCCAAACTCCCTACAAGCAAGCGA...................................................................................................................................................2850.4020000000020
...................................................................................................CTTGCAGTCAGCGAGGGCAGATCAGC..............................................................................................................................................................................................................2660.3320200000000
...........................................................................................................................................................................TACAAGCAAGCGAGTGGAGTGG..........................................................................................................................................2260.3320200000000
..............................................................................................................CGAGGGCAGATCAGCATTTGGGG......................................................................................................................................................................................................2330.3310000001000
..............................................................TCCCTTTGCAACCCGTGTGAGTAA-....................................................................................................................................................................................................................................................2470.2920200000000
..............................................................TCCCTTTGCAACCCGTGTGAGT.......................................................................................................................................................................................................................................................2270.2920200000000
..............................................................TCCCTTTGCAACCCGTGTGAG........................................................................................................................................................................................................................................................2170.2920200000000
...................................................................................................CTTGCAGTCAGCGAGGGCAGATC.................................................................................................................................................................................................................2370.2920200000000
.............................................................................................TGCCTTCTTGCAGTCAGCGAGGG.......................................................................................................................................................................................................................2340.2510100000000
........................................................................................................................................................................CCCTACAAGCAAGCGAGTGGAG.............................................................................................................................................2240.2510100000000
..........................................................................................................................................................................CTACAAGCAAGCGAGTGGAGTGG..........................................................................................................................................2340.2510100000000
..........................................................................................................................................................................CTACAAGCAAGCGAGTGGAGT............................................................................................................................................2140.2510100000000
.............................................................................................TGCCTTCTTGCAGTCAGCGA..........................................................................................................................................................................................................................2040.2510100000000
.............................................................................................TGCCTTCTTGCAGTCAGCGAGGGCAGA...................................................................................................................................................................................................................2740.2510100000000
..........................................................................................................TCAGCGAGGGCAGATCAGCATTTGG........................................................................................................................................................................................................2540.2510100000000
..............................................................................................................................................................................................TGGGCAAGGCATGCTGCAACGA.......................................................................................................................2250.2010100000000
..........................................CACAATCTGGCGAAGATTAT.............................................................................................................................................................................................................................................................................2050.2010100000000
.......................................................................................................CAGTCAGCGAGGGCAGATCAGC..............................................................................................................................................................................................................2260.1710100000000
..........................................................................................................TCAGCGAGGGCAGATCAGCAT............................................................................................................................................................................................................2160.1710100000000
..............................................................................................................................................................................AAGCAAGCGAGTGGAGTGGGC........................................................................................................................................2160.1710000001000
...........................................................................................................................................................................TACAAGCAAGCGAGTGGAGTGGG.........................................................................................................................................2360.1710100000000
..........................................................................................................TCAGCGAGGGCAGATCAGCAA............................................................................................................................................................................................................2160.1710100000000
..................................................................................................TCTTGCAGTCAGCGAGGGCAGATCAGCA.............................................................................................................................................................................................................2860.1710100000000
....................................................................TGCAACCCGTGTGAGTAA-TCT.................................................................................................................................................................................................................................................2160.1710100000000
...................................................................................TAA-TCTCACTGCCTTCTTGCAGTCAG.............................................................................................................................................................................................................................2660.1710100000000
..............................................................................................................................................................................AAGCAAGCGAGTGGAGTGGGCAAG.....................................................................................................................................2460.1710100000000
....................................................................TGCAACCCGTGTGAGTAA-TCTCAC..............................................................................................................................................................................................................................................2460.1710100000000
..............................................................................................................................................................................AAGCAAGCGAGTGGAGTGGA.........................................................................................................................................2060.1710100000000
.................................................................................................................................................................................CAAGCGAGTGGAGTGGGCAAGG....................................................................................................................................2260.1710100000000
...................................................................................................CTTGCAGTCAGCGAGGGCAGAT..................................................................................................................................................................................................................2270.1410100000000
...........................................................TATTCCCTTTGCAACCCGTGTGAGTA......................................................................................................................................................................................................................................................2670.1410100000000
..............................................................TCCCTTTGCAACCCGTGTGAGTAA-TC..................................................................................................................................................................................................................................................2670.1410100000000
..............................................................TCCCTTTGCAACCCGTGTGAGTTG-....................................................................................................................................................................................................................................................2470.1410100000000
............................................................ATTCCCTTTGCAACCCGTGT...........................................................................................................................................................................................................................................................2070.1410100000000
...............................................................CCCTTTGCAACCCGTGTGAGT.......................................................................................................................................................................................................................................................2170.1410100000000
.....................................................................................................................................................................................CGAGTGGAGTGGGCAAGGC...................................................................................................................................1970.1410100000000
...................................................................................................CTTGCAGTCAGCGAGGGCAGATCAG...............................................................................................................................................................................................................2570.1410100000000
....................................................................................................TTGCAGTCAGCGAGGGCAGATCAA...............................................................................................................................................................................................................2470.1410100000000
......................................................................................................GCAGTCAGCGAGGGCAGATCAG...............................................................................................................................................................................................................2270.1410000001000
...........................................................TATTCCCTTTGCAACCCGTGTGAG........................................................................................................................................................................................................................................................2470.1410100000000
droPer2
---------------------------------------GAGCACAATCTGGCGAAGATTATTCCCTTTGCAACCCGTGTGAGTAA-TCTCACTGCCTTCTTGCAGTCAGCGAGGGCAGATCAGCATTTGGGGAACCCAACACTTTTGGAAGAGCTTGTGGCCAAACTCCCTACAAGCAAGCGAGTGGAGTGGGCAAGGCATGCTGCAACGATT---------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................TCAGCATTTGGGGAACCCAACA.............................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................CCTACAAGCAAGCGAGTGGAGTGG..........................................................................................................................................2430.331010000
...................................................................................................CTTGCAGTCAGCGAGGGCAGATCA................................................................................................................................................................................................................24150.203030000
.....................................................................................................TGCAGTCAGCGAGGGCAGATCAGCA.............................................................................................................................................................................................................25110.091010000
.......................................................................................................CAGTCAGCGAGGGCAGATCAGCA.............................................................................................................................................................................................................23110.091010000
...................................................................................................................................................................................AGCGAGTGGAGTGGGCAAGGCATG................................................................................................................................24120.081010000
..............................................................................................................................................................................AAGCAAGCGAGTGGAGTGGGC........................................................................................................................................21120.081010000
...............................................................................................................................................................................AGCAAGCGAGTGGAGTGGGCAAGGC...................................................................................................................................25120.081010000
...................................................................................................CTTGCAGTCAGCGAGGGCAGATC.................................................................................................................................................................................................................23150.071010000
...................................................................................................CTTGCAGTCAGCGAGGGCAGA...................................................................................................................................................................................................................21150.071010000
droAna3
---------------------------------------GAACATAATTTGGGAAAGCTCGTTTCATTCTCCACGCATGTGAGTAA-CCTCAAGGCTTTCTTGCAGTCGGCAAAGGCAGAACAGCATTTGTGTAATCCTACCCTCATGGAAGACCTTGTGGCCAAGCTGCCAATAAGTAAACGAGTGAAGTGGGTAAGCTATGCTGCAGCTATTCAGCCCTTTCCGACTATTGTAGACTGAAGTTCGTGGCTGACTGACTTAGCG------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................GACTATTGTAGACTGAAGTTCGTGG.................................................................................2512.002200000
.....................................................................................................TGCAGTCGGCAAAGGCAGAACAGCATT...........................................................................................................................................................................................................2711.001010000
............................................................................................................................................................................................................................TTTCCGACTATTGTAGACTGAAGTTCG....................................................................................2711.001100000
droBip1
---------------------------------------GAGCAAAATCTGGAAATGCTCGTCACATTCGCCACGCATGTGAGTAA-TCTAAAGGCCTTCTTGCAGTCAGCAAAGGCAGAGCAGCATTTGTGTAACCCTACCCTTATGGAGAAGCTTGTGGCCAAGCTCCCGATAAGCAACCGAGTGGAGTGGGGAATGCATTTTGCAGCTATCAAGCCCTATTCAACCCTTGTGGATTTCAGTTCGTCGCTGACGGATTTGGCTAATGTGGTCTGCGCGGTAGCAGACATTGGCGTA----------------------AAATAGCCAAASizeHit CountTotal NormTotal
No Reads
droKik1
---------------------------------------G---------------------TTCCCTTCGCAACCCGAGTGAGTAA-CCTCACGGCCTTCTTGCAGTCAGCGAAGGCGGAGCATCACCTGGGGAACCCATCCCTTATGGAGGAGCTTGTGGCAAAGCTTCCTACGAGCAAGCGGATGGATTGGGCCAGGCATGCTGCATCGATCGAGCCCTTTACCACTGTAGCGCACTTCAACGCGTGGCT-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------CCGGTTACAGAAAATAATTTAGAAAAGTTGGTCGTATTCGCTTCTTAGGTTGGTAA-CTTGATTATATTTTTGAAATCAGCAAATGCAACTCAGCATTTACAGAATCCTTCTCTGATAGAGAGCTTAGTAGGTAAGATGCCACTCAGTAAGCGAGTTCAATGGATTGAATATTCATCGCCAATTCAGCCATATCCTAATTTAGACCACTTCAGCAATTGGCTGAGCACTATGGCAAGAAGCATTGCA-GGGCAACCATT---G----CAG--C-------------CAGTTAAT------ASizeHit CountTotal NormTotal
No Reads
droTak1
--TCAGATGAATATGGTTAACCAAATAACGCCGGTAACAGAGAATAACTTAGAAAAGATAGTCTTATTTGCATCTAAGGTTGACAA-TTTAGTTATATTTTTAAAATCAGCCAATGCCACTCAACATTTACAAAATCCAGCCCTGATAGAGAGCCTGGTAGGTAAAATGCCACTCAGTAAGCGGGTTCAATGGATCGAGCATTCATCGCAAATTCAGCTTTATCCAAATTTAGATCACTTCAGCAATTGGCTGAGCACTATGGCAAGAAGCATTGCAAGGGCAACCGTA---T----CAGCAC-------------CGGTAAATA------SizeHit CountTotal NormTotal
No Reads
droEug1
------------------------------CCGATTACGGAGCAGAACCTGGCGAGGATCGTTCCCTTCGTAACTAGAGTGAGTAA-CCTCACGGCCTTCTTGCAGTCGGCGAAGGCGGAGCAACATCTGGGAAACCCCACCCTCATGGAGCAGCTTGTGGCAAAGCTTCCCACCAGCAAACGAGTGGATTGGGCCAGGCACGCTGCATCGATCGAGCCCTTCCCCACTGTAGCGCACTTCAGCGTGTGGCT-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------GAGCACAATTTGGCGAAGATCATTCCCTTCGCAACCCGAGTGAGTAA-CCTCGCGGCCTTCTTGCAGTCAGCGAAGGCGGAGCAGCATCTGGGGAACCCAACCCTCATGGAGGAGCTTGTGGCCAAGCTGCCAACGAGCAAGCGAGTAGACTGGGCAAGGCATGCTGCAACGATTGCGCCCTTTCCCACTGTAGTCCACTTCAGCGCGTGGCT-------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................TAGACTGGGCAAGGCATGCTGCAAC.........................................................................................................................254120.25481000000000000000000000000000000000000000000100000100010000000000000000000000000000000311000000000100000000000000010000000000000000010000801011110010021113070000000000000000000200000600000020010110122131611532030405121200090852304306139330000000000000000000000000000000000000000000000000000000000003000004203900000014119000000000000003832000000
........................................................................................................................................................................GCCAACGAGCAAGCGAGTAGACTGGGC........................................................................................................................................27884.886790000000000000000000002000000000000002020010050200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000023516043036098840000000000000000000000000000000003267002001780010003126262135000220721000150100000000000000000000000000000000000000000000000000000000000200020132311670001003753350000000000000025524530000000
..........................................................................................................................................................................CAACGAGCAAGCGAGTAGACTGGGC........................................................................................................................................25855.75446000000000000000000000101000000000000403020101040100000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000131104102108822000000000000000000000000020000001012630120022280000003020310110001001042062444000000000010100000200100000000000000000000000000000000000000800001396461020001125190000000000010013271718000000
...............................................................................................................................................TCATGGAGGAGCTTGTGGCCAAGCT...................................................................................................................................................................252038.70774000000000000000000000000000003000000100000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220213122093020000000000000000000103000000000020340020110300004108321080000009145178261407910000000000000000010000000000000000000000000000000000000000000110200010111002241500000000000601324838380000000
...................................................................................TAA-CCTCGCGGCCTTCTTGCAGTCAGC............................................................................................................................................................................................................................271835.6764200000010000100000000012000000551001020303130014011106000010000000000000000000000001122210000000101000100000000000000000000000000200142810122203800100011000023200000000000000000005150011000000322000101463300202000240000110464905235610111610000000000010000030020000000000000000000000000000000000000020000011023001000310000000000000000541000000
...........................................................................................................................................................................AACGAGCAAGCGAGTAGACTGGGC........................................................................................................................................24830.63245000000000000000000000000000000000000000000101000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021011020300000000000000000000000000200000032193020101970000101102201200012034005010000000000000000000000000000000000000000000000000000000000000020000107324100000102016000000000000009121411000000
..............................................................................................................................TCTGGGGAACCCAACCCTCATGGAGGA..................................................................................................................................................................................27827.5022000000000000000000000000000000000000010001000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002002000000000000000000000000000010000000021005000000000000101203900080101403602322201000000000100000000000000000000000000000000000000000000000000000001202000000312000000000000001300000000
........................................................................................................................................................................GCCAACGAGCAAGCGAGTAGACTGGG.........................................................................................................................................26827.25218000000000000000000000000000000000000302012001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030131010000000000000000000000000000400000030730011054000000143031233000110310010010001000000000000000000000000000000000000000001000000000000000801000311010100100522100000000000000011228000000
................................................................................................................................................CATGGAGGAGCTTGTGGCCAAGCT...................................................................................................................................................................242024.2548500000000000000000000000100000300000000000010000000000000000000000000000000000000000000000000001010000000000000110000000000000000000000000000711000760414131000000000300000000010300010000003192020008230001209000411300010022700440244220000000000000000000000000000000000000000000000000000000000011133010102003400024200000000000030306324226000000
......................................................................................................................................................................................GAGTAGACTGGGCAAGGCATGCTGC............................................................................................................................25424.25970000000000000000000000000000000000001000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000012000000000000000000000000000000000000000001000000008442600000106000202010817830000000000000000000000000000000000000000000000000000000000001000001227000000301000000000000000322000000
...............................................................................TGAGTAA-CCTCGCGGCCTTCTTGCAGT................................................................................................................................................................................................................................271920.213840000000000000000000001000000000000000031002000601010000005000000000000000000000000010000000000000000005000000000100100000000000101000001000000100161702380200000000000000000000000000000000334300001401000200000118250008000180272262723000000000000100000000000000000000000000000000000000000000000000000144116250000008710000000000000002100000010
...................................................................................TAA-CCTCGCGGCCTTCTTGCAGTCAG.............................................................................................................................................................................................................................261819.223460000000000010000000000410000010000001030100032402000400000000000000000000000000000000010000101401100000000000002000000000000000000000010000000210011210150020000000000000000000101000100000031320200961152000010301011150001309710013018261610000000001000000000000000000000000000000001000000000000000000010036351000001254000000000000002542000000
.................................................................................................TTCTTGCAGTCAGCGAAGGCGGA...................................................................................................................................................................................................................232018.7037400000000000000000000011000000000000000102100010010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301822010210000000000000000000000000000000000006158901003663610000016461195000015057407001100000000000000000010030000000000000000000000100000000000000010000215020000000110000000000010509013000000
............................................................................................................................................................TGTGGCCAAGCTGCCAACGAGCAAGC.....................................................................................................................................................262018.15363000001000100000000000110000001000000106002400010000000000000000000000000000000000000000000000040040000000000000500000000000000000000001000000112161502630107000000000000000000000010000000000612600003012400000000301396000171616001000100000000020030000000030000000000000000000000000000000000000042010001360003000571311000000000000035005010000
...................................................................................TAA-CCTCGCGGCCTTCTTGCAGT................................................................................................................................................................................................................................231917.53333000000000000000000000022100000000000000011500250000000000000000000000000000000000000001000000020000000000000000000000000000000000000100300000010001120010160000000000000000000000000100000055960182210212250303132431000120714901302323160000000001100000000000000000000000000000000000001000000000002000003626001000876000000000000008251000000
.....................................................................................................................................................................................CGAGTAGACTGGGCAAGGCATGCTGC............................................................................................................................26417.50700000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000010001000010100000000100000000000000000000000000000000000000201000202001300000180000000021604730000000000000000000000000000000000000000000000000000000000003000001009000000300000000000000010120000000
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......................................................................CAACCCGAGTGAGTAA-CCTCG...............................................................................................................................................................................................................................................21201.402800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000020008120000000000000001301000000000000000000000000000000000
..............................................................................................................................................................................................................CAACGATTGCGCCCTTTCCCACT......................................................................................................23201.40280000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000305120901010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000
................................................................................................................................................CATGGAGGAGCTTGTGGCC........................................................................................................................................................................19201.40280000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060300100000260000001000001000000000000000000000000000000000000000000000000000000000000001000000011010000300000000000000000000000000
............................................................................................................................................................TGTGGCCAAGCTGCCAACGAGCAAGCGA...................................................................................................................................................28201.40280000000000000000000001000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000100100000000000000000000000000000000000000000100000001000050000200000000100000000000000000000000000000000000000000000000000000000000000000010001000000106000000000000010000000000
...................................................................................................................................................................................................................ATTGCGCCCTTTCCCACTGTA...................................................................................................21201.402800000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000003000020101030000000000000000000000000000000000000000000000030100000000000000001200000000000000000000000000000000000
...........................................................................................................................................ACCCTCATGGAGGAGCTTGTGG..........................................................................................................................................................................22201.40280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000102000000100000000000000000100000000000000000000000000000000000000000000000000000000000020000000000010000303000000253000000000000001000000000
.........................................................................................................................................CAACCCTCATGGAGGAGCTTGTG...........................................................................................................................................................................23201.40280000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000010000100000013000000000000000000000000000000000003004000200000000000000000301000100000000000000000000000000000000000000000000000000000000000000000000001100000000130000000000000000000000000
..............................................................................................................................TCTGGGGAACCCAACCCTCATGGAG....................................................................................................................................................................................2581.38110000000000000000000000100000000000000000001000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000020201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ATCTGGGGAACCCAACCCTCATGGAGGAG.................................................................................................................................................................................2981.38110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.......................................................................................................................AGCAGCATCTGGGGAACCCAA...............................................................................................................................................................................................2181.38110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000030000000000000000110000000010000000000000000002000000
.........................................................................................................................................................................CCAACGAGCAAGCGAGTAGACTGG..........................................................................................................................................2481.38110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000030000000000000000000000000010000000000000000000000000000000000000000000000000000000100001000000001000000110000000000000000010000000
.....................................................................................................................................................................GCTGCCAACGAGCAAGCGAGTAGACTG...........................................................................................................................................2781.38110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000001010201000000000000000000000000000000000000000000000000000000000000000000010000000000021000000000000000000000000
.................................................................................................TTCTTGCAGTCAGCGAAGG.......................................................................................................................................................................................................................19201.35270000000000000000000000001000010000000000001000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000215000010620000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................AACGATTGCGCCCTTTCCCACTGTAGTC................................................................................................28201.35270000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000002000000204000001000000000200020001420000000000000000000000000000000000000000000000000000000000001010000001000000002000000000000000000000000
..................................................................................................................GGCGGAGCAGCATCTGGGGAACC..................................................................................................................................................................................................2361.3380000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211000000000000000000000000
...................................................................................................................................................................................................AAGGCATGCTGCAACGATTGCGC.................................................................................................................2331.3340000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................GCGAAGGCGGAGCAGCATCTGG........................................................................................................................................................................................................2261.3380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000200000000200000000000000000000000000
.................................................................................AGTAA-CCTCGCGGCCTTCTTGCAGT................................................................................................................................................................................................................................25191.32250000000000000000000000000000000000000000000000100000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100100000000100100000000000001000402110000000000000000000000000000000000000000000000000000000000000000000101000000400000000000000000000000000
..............................................................................................................................................................................................................CAACGATTGCGCCCTTTCCCACTG.....................................................................................................24201.30260000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000100000000000102010803100000000000000000000000000000000000000000000000000000000000000000000010000000121000000000000000000000000
......................................................................................................................................................................................................................................TAGTCCACTTCAGCGCGTGGC................................................................................21201.302600000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000010000000002001100000010000000000000000000000000000000000000000000002002120000000000000000000000000000000000000000000000000000
.............................................................TTCCCTTCGCAACCCGAGTGAGTAA-CC..................................................................................................................................................................................................................................................27201.30260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000110000000000102000000100000000000100000500100101501000000000000000001000000000000000000000000000000000000000000000000100000000110000000000000000000000000
droSec2
---------------------------------------GAGCACAATTTGGCGAAGATCATTCCCTTCGCAACCCGAGTGAGTAA-CCTCGCGGCCTTCTTGCAGTTAGCGAAGGCAGAGCAACACCTGGGGAACCCAACCCTCATGGAGGAGCTTGTGGCCAAGCTGCCAACGAGCAAGCGAGTGGACTGGGCCAGGCATGCAGCAACGATTGCGCCCTTTCCCACTGTAGTCCACTTCAGCGCGTGGCT-------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................CAGGCATGCAGCAACGATTGCGCC................................................................................................................2415.0052012
....................................................................................................................................................................................................AGGCATGCAGCAACGATTGCGCCC...............................................................................................................2412.0022000
.....................................................................................A-CCTCGCGGCCTTCTTGCAGTTAGC............................................................................................................................................................................................................................2512.0021001
...................................................................................................................................................................................................CAGGCATGCAGCAACGATTGCGCCC...............................................................................................................2512.0022000
.........................................................................................TCGCGGCCTTCTTGCAGTTAGCGAAA........................................................................................................................................................................................................................2611.0010010
...................................................................................................................................................................................................CAGGCATGCAGCAACGATTGCGC.................................................................................................................2311.0010010
...........................................................................................GCGGCCTTCTTGCAGTTAGCGAAGGCAGAG..................................................................................................................................................................................................................3011.0010010
..............................................................................................................................................................................................TGGGCCAGGCATGCAGCAACGATTGC...................................................................................................................2611.0011000
.......................................................................................................CAGTTAGCGAAGGCAGAGCAACACC...........................................................................................................................................................................................................2511.0011000
...............................................................................................CCTTCTTGCAGTTAGCGAAGGCAGA...................................................................................................................................................................................................................2511.0011000
..............................................................................................................................................................................................................................TCCCACTGTAGTCCACTTCAGCGCG....................................................................................25190.741413001
..........................................................TCATTCCCTTCGCAACCCGAGTGAGTA......................................................................................................................................................................................................................................................27110.6474030
................................................................................................................................TGGGGAACCCAACCCTCATGGAGGAGC................................................................................................................................................................................27120.5874111
..............................................................................................................................................................................................................................TCCCACTGTAGTCCACTTCAGCGCGT...................................................................................26190.53108020
................................................................................................................................TGGGGAACCCAACCCTCATGGAGGAGCT...............................................................................................................................................................................28120.4255000
............................................................................................................................................................TGTGGCCAAGCTGCCAACGAGCAAGC.....................................................................................................................................................2680.3831020
..........................................................TCATTCCCTTCGCAACCCGAGTGAGT.......................................................................................................................................................................................................................................................26110.3641030
.......................................................................................................................................................................TGCCAACGAGCAAGCGAGTGGACTGGG.........................................................................................................................................27140.2942020
.............................................................TTCCCTTCGCAACCCGAGTGAGTAA-CCT.................................................................................................................................................................................................................................................28110.2731011
............................................................................................................................................CCCTCATGGAGGAGCTTGTGGCCAAGC....................................................................................................................................................................2740.2511000
..........................................................................................................................................AACCCTCATGGAGGAGCTTGTGGCCA.......................................................................................................................................................................2640.2511000
.......................................................................................................................................................................TGCCAACGAGCAAGCGAGTGGACTGG..........................................................................................................................................26140.2133000
............................................................................................................................................................................................................................TTTCCCACTGTAGTCCACTTCAGCGC.....................................................................................26190.2144000
...............................................................................................................................................................................................................................CCCACTGTAGTCCACTTCAGCGCGTGGC................................................................................28160.1933000
..............................................................TCCCTTCGCAACCCGAGTGAGTAA-CC..................................................................................................................................................................................................................................................26110.1821001
.............................................................TTCCCTTCGCAACCCGAGTGAGTAA-CC..................................................................................................................................................................................................................................................27110.1821010
.................................................................................................................................GGGGAACCCAACCCTCATGGAGGAGCT...............................................................................................................................................................................27120.1722000
......................................................................................................................................................................CTGCCAACGAGCAAGCGAGTGGACTG...........................................................................................................................................26150.1321010
..............................................................................................................................................................TGGCCAAGCTGCCAACGAGCAAGCGAGT.................................................................................................................................................2880.1311000
...........................................................................................................................................................TTGTGGCCAAGCTGCCAACGAG..........................................................................................................................................................2280.1311000
.........................................................................................................................CAACACCTGGGGAACCCAACCCTC..........................................................................................................................................................................................24160.1322000
...............................................................................................................................................................GGCCAAGCTGCCAACGAGCAAGC.....................................................................................................................................................2380.1311000
...........................................................................................................................................................TTGTGGCCAAGCTGCCAACGAGCAA.......................................................................................................................................................2580.1310001
............................................................................................................................................................TGTGGCCAAGCTGCCAACGAGCAAGCG....................................................................................................................................................2780.1310001
..............................................................................................................................................................................................................................TCCCACTGTAGTCCACTTCAGCGCGTG..................................................................................27190.1122000
.....................................................................................................................................................................................................................TGCGCCCTTTCCCACTGTAGTCCACTTC..........................................................................................28190.1122000
...........................................................CATTCCCTTCGCAACCCGAGTGAGT.......................................................................................................................................................................................................................................................25110.0910010
............................................................ATTCCCTTCGCAACCCGAGTGAGTA......................................................................................................................................................................................................................................................25110.0910010
..........................................................TCATTCCCTTCGCAACCCGAGTGAGTAA-C...................................................................................................................................................................................................................................................29110.0911000
..................................................................TTCGCAACCCGAGTGAGTAA-CCT.................................................................................................................................................................................................................................................23110.0910010
........................................................................................................................GCAACACCTGGGGAACCCAACCCTCA.........................................................................................................................................................................................26110.0911000
....................................................................CGCAACCCGAGTGAGTAA-CCTC................................................................................................................................................................................................................................................22110.0910010
...........................................................CATTCCCTTCGCAACCCGAGTGAGTA......................................................................................................................................................................................................................................................26110.0911000
..........................................................TCATTCCCTTCGCAACCCGAGTGA.........................................................................................................................................................................................................................................................24110.0911000
.............................................................TTCCCTTCGCAACCCGAGTGAGTA......................................................................................................................................................................................................................................................24110.0911000
..................................................................TTCGCAACCCGAGTGAGTAA-CCTCGCGG............................................................................................................................................................................................................................................28110.0911000
..................................................................TTCGCAACCCGAGTGAGTAA-CCTC................................................................................................................................................................................................................................................24110.0910010
..........................................................TCATTCCCTTCGCAACCCGAGT...........................................................................................................................................................................................................................................................22110.0910010
...........................................................CATTCCCTTCGCAACCCGAGTGAGTAA-CC..................................................................................................................................................................................................................................................29110.0911000
..............................................................TCCCTTCGCAACCCGAGTGAGTAA-CCT.................................................................................................................................................................................................................................................27110.0910010
................................................................................................................................TGGGGAACCCAACCCTCATGGAGGACT................................................................................................................................................................................27120.0811000
...............................................................................................................................CTGGGGAACCCAACCCTCATGGAGGAGC................................................................................................................................................................................28120.0810001
...............................................................................................................................CTGGGGAACCCAACCCTCATGGAGG...................................................................................................................................................................................25120.0811000
.............................................................................................................................ACCTGGGGAACCCAACCCTCATGGAGG...................................................................................................................................................................................27120.0811000
...........................................................................................................................ACACCTGGGGAACCCAACCCTCATG.......................................................................................................................................................................................25130.0811000
.........................................................................................................................CAACACCTGGGGAACCCAACCCTCA.........................................................................................................................................................................................25130.0811000
.........................................................................................................................................................................CCAACGAGCAAGCGAGTGGACTGG..........................................................................................................................................24140.0711000
..........................................................................................................................................................................CAACGAGCAAGCGAGTGGACTGGGC........................................................................................................................................25140.0710010
.......................................................................................................................................................................TGCCAACGAGCAAGCGAGTGGACTGGGC........................................................................................................................................28140.0710100
.................................................................................................................................................................................................................................CACTGTAGTCCACTTCAGCGCGTGGC................................................................................26160.0611000
...............................................................................TGAGTAA-CCTCGCGGCCTTCTTGCAGT................................................................................................................................................................................................................................27160.0610001
......................................................................................................................................................................CTGCCAACGAGCAAGCGAGTGGAC.............................................................................................................................................24160.0611000
................................................................................................................................................................................................................................CCACTGTAGTCCACTTCAGCGCGTGGC................................................................................27160.0611000
..................................................................................................................................................................................................................................ACTGTAGTCCACTTCAGCGCGTGGC................................................................................25160.0611000
................................................................................................................................................................................GCAAGCGAGTGGACTGGGCCAGGC...................................................................................................................................24170.0611000
..................................................................................................................................................................................AAGCGAGTGGACTGGGCCAGG....................................................................................................................................21170.0611000
.................................................TGGCGAAGATCATTCCCTTCG.....................................................................................................................................................................................................................................................................21170.0610001
.....................................................................................................................................................................................CGAGTGGACTGGGCCAGGCATT................................................................................................................................22180.0611000
.......................................................................................................................................................................................................................CGCCCTTTCCCACTGTAGTCCACTTC..........................................................................................26190.0511000
...................................................................................................................................................................................................................................CTGTAGTCCACTTCAGCGCGT...................................................................................21190.0510010
..............................................................................................................................................................................................................CAACGATTGCGCCCTTTCCCA........................................................................................................21190.0511000
.............................................................................................................................................................................................................................TTCCCACTGTAGTCCACTTCAGCGCGT...................................................................................27190.0511000
..............................................................................................................................................................................................................................TCCCACTGTAGTCCACTTCAGCGC.....................................................................................24190.0510010
............................................................................................................................................................................................................................TTTCCCACTGTAGTCCACTTCAGCGCGT...................................................................................28190.0511000
............................................................................................................................................................................................................................TTTCCCACTGTAGTCCACTTCAGCGCG....................................................................................27190.0511000
....................................................................................................................................................................................................................................TGTAGTCCACTTCAGCGCGTGT.................................................................................22190.0511000
..............................................................................................................................................................................................................................TCCCACTGTAGTCCACTTCAGCG......................................................................................23190.0511000
...............................................................................................................................................................................................................AACGATTGCGCCCTTTCCCACTGT....................................................................................................24190.0510100
...............................................................................................................................................................................................................................CCCACTGTAGTCCACTTCAGCGCG....................................................................................24190.0511000
............................................................................................................................................................................................................................TTTCCCACTGTAGTCCACTTCAGCGA.....................................................................................26190.0511000
...............................................................................TGAGTAA-CCTCGCGGCCTTCT......................................................................................................................................................................................................................................21200.0511000
droYak3
---------------------------------------GAGAATAATTTAAAAAAGCTAGTTTTATTCGCTTCGAAAATAGATAA-TCTAGTAATTTTCTTGAAATCGGCTAGTGCTTCCCAACATTTACAGAATCCGTCGTTGATAGAAAGCTTAGTAGGAAAGATGCTACTTAGCAAACGTATTCAATGGATTGAATATTTATCACAGATACTGTCATAACCCAATTTAGACGACTTCAGCCGTTGGTTAAGTAATATGGCTAGAAGTATAGCAAGGGCCATAGTT---A----CAGATC-------------CAATAAATAATAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/17/2015 at 10:05 PM