ID:

dmo_338

 Coordinate:

scaffold_6540:1739258-1739399 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.2 -41.2 -41.0 -41.0

Flybase annnotation

intron [Dmoj\GI23766-in]; utr3 [utr3_minus_8345]

No Repeatable elements found

Sense Strand Reads

GCTTCAAGTATAATATTTATGTATTCACATGCCGACAAATATCAATGGATACCATTAAAAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCAGTGCACTGTAACCGTTGCAGAGGGCAATTGTTCAAATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAGTTTCAAACATGCATTCACCAAAAAATGAAATTCAAGCAAAAAATAAAAAGAAAACAAAATAAAT

**********************************************************((.((((((...(((.(((((.((((((((..((((((..((.((.(((.(((((.....))))).)))))...))...........))))))..))))))))))))).)))...))))))))...********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 V056

head

 V049

head

 M046

female body

 V041

embryo

 V110

male body
....................................................................................................................................................TAGCACCATGAGATTCAGCTC......................................................................... 21 0 1 193355.00 193355 173065 7009 4986 1109 4423 2763
....................................................................................................................................................TAGCACCATGAGATTCAGCTT......................................................................... 21 1 1 25206.00 25206 23119 378 296 557 362 494
....................................................................................................................................................TACCACCATGAGATTCAGCTC......................................................................... 21 1 1 7881.00 7881 7872 0 2 1 1 5
....................................................................................................................................................TAGTACCATGAGATTCAGCTC......................................................................... 21 1 1 7106.00 7106 7095 3 1 0 5 2
...................................................................................................................................................CTAGCACCATGAGATTCAGCTC......................................................................... 22 1 1 6764.00 6764 6731 11 7 9 6 0
.........................................................................ACTGAATTCTCGTGGGTCTGCA................................................................................................................................................... 22 0 1 5606.00 5606 1006 256 150 3768 68 358
....................................................................................................................................................TGGCACCATGAGATTCAGCTC......................................................................... 21 1 1 5197.00 5197 5180 4 8 0 4 1
....................................................................................................................................................TAGCACCATGAGATTCAGCT.......................................................................... 20 0 1 4889.00 4889 2719 756 573 117 218 506
....................................................................................................................................................TAGCACCATGAGATTCAGCTCT........................................................................ 22 0 1 2721.00 2721 1865 257 217 67 248 67
.........................................................................ACTGAATTCTCGTGGGTCTGC.................................................................................................................................................... 21 0 1 2014.00 2014 329 384 234 747 27 293
...................................................................................................................................................CGAGCACCATGAGATTCAGCTC......................................................................... 22 2 1 1347.00 1347 1347 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTCC........................................................................ 22 1 1 1341.00 1341 1272 18 19 2 25 5
.....................................................................................................................................................AGCACCATGAGATTCAGCTC......................................................................... 20 0 1 1282.00 1282 1171 5 1 100 3 2
....................................................................................................................................................TACCACCATGAGATTCAGCTT......................................................................... 21 2 1 1261.00 1261 1258 1 0 0 0 2
....................................................................................................................................................TAGCACCATGCGATTCAGCTC......................................................................... 21 1 1 1246.00 1246 1178 11 38 0 19 0
....................................................................................................................................................TTGCACCATGAGATTCAGCTC......................................................................... 21 1 1 1228.00 1228 1225 1 0 0 2 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTTT........................................................................ 22 1 1 1191.00 1191 987 78 44 45 15 22
....................................................................................................................................................TAGTACCATGAGATTCAGCTT......................................................................... 21 2 1 904.00 904 904 0 0 0 0 0
....................................................................................................................................................TAGCACCCTGAGATTCAGCTC......................................................................... 21 1 1 772.00 772 752 5 13 0 2 0
....................................................................................................................................................TAGCACCATGAGCTTCAGCTC......................................................................... 21 1 1 760.00 760 669 27 41 0 22 1
....................................................................................................................................................TAGCACCATGAGATTCAGCTCA........................................................................ 22 1 1 756.00 756 419 102 93 29 71 42
....................................................................................................................................................CAGCACCATGAGATTCAGCTC......................................................................... 21 1 1 705.00 705 670 14 12 0 4 5
....................................................................................................................................................TAGCACCATGAGATTCAGCC.......................................................................... 20 1 1 653.00 653 651 1 1 0 0 0
................................................................................................................................................GATCTAGCACCATGAGATTCAGCTC......................................................................... 25 3 1 650.00 650 650 0 0 0 0 0
...................................................................................................................................................CTAGCACCATGAGATTCAGCTT......................................................................... 22 2 1 648.00 648 645 1 0 1 1 0
....................................................................................................................................................GAGCACCATGAGATTCAGCTC......................................................................... 21 1 1 627.00 627 617 2 5 0 2 1
....................................................................................................................................................TAGCACCATGAGATTTAGCTC......................................................................... 21 1 1 605.00 605 587 6 6 1 4 1
....................................................................................................................................................TAGCACCATGAGATTCAGCTA......................................................................... 21 1 1 587.00 587 492 19 22 20 27 7
....................................................................................................................................................TATCACCATGAGATTCAGCTC......................................................................... 21 1 1 558.00 558 532 6 4 1 5 10
....................................................................................................................................................TGGCACCATGAGATTCAGCTT......................................................................... 21 2 1 539.00 539 537 1 0 0 1 0
..................................................................................................................................................TCTAGCACCATGAGATTCAGCTC......................................................................... 23 1 1 513.00 513 513 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGC........................................................................... 19 0 1 462.00 462 414 20 8 8 8 4
....................................................................................................................................................AAGCACCATGAGATTCAGCTC......................................................................... 21 1 1 409.00 409 391 6 4 0 5 3
....................................................................................................................................................TACTACCATGAGATTCAGCTC......................................................................... 21 2 1 349.00 349 349 0 0 0 0 0
.....................................................................................................................................................ATCACCATGAGATTCAGCTC......................................................................... 20 1 1 317.00 317 317 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCCC......................................................................... 21 1 1 274.00 274 230 16 18 0 8 2
....................................................................................................................................................TAACACCATGAGATTCAGCTC......................................................................... 21 1 1 272.00 272 249 11 6 0 6 0
..........................................................................CTGAATTCTCGTGGGTCTGCA................................................................................................................................................... 21 0 1 269.00 269 1 0 0 268 0 0
....................................................................................................................................................TAGCTCCATGAGATTCAGCTC......................................................................... 21 1 1 263.00 263 258 3 0 0 1 1
....................................................................................................................................................TAGCAGCATGAGATTCAGCTC......................................................................... 21 1 1 251.00 251 237 12 1 0 0 1
.................................................................................................................................................ATCTAGCACCATGAGATTCAGCTC......................................................................... 24 2 1 243.00 243 242 0 0 0 1 0
....................................................................................................................................................TAGCACCATGAGATTCATCTC......................................................................... 21 1 1 234.00 234 189 16 25 0 1 3
....................................................................................................................................................TAGCACCATGAGATTCAGCTG......................................................................... 21 1 1 232.00 232 208 2 4 1 17 0
....................................................................................................................................................TAGCACCACGAGATTCAGCTC......................................................................... 21 1 1 203.00 203 190 8 5 0 0 0
....................................................................................................................................................TACCACCATGAGATTCAGCT.......................................................................... 20 1 1 185.00 185 184 0 1 0 0 0
....................................................................................................................................................TTGCACCATGAGATTCAGCTT......................................................................... 21 2 1 176.00 176 173 1 0 0 0 2
....................................................................................................................................................TAGCACCATGAGATTCAGCTTC........................................................................ 22 2 1 176.00 176 141 3 4 5 1 22
....................................................................................................................................................TAGCACCATGAGATTCGGCTC......................................................................... 21 1 1 170.00 170 144 15 4 0 5 2
.....................................................................................................................................................AGCACCATGAGATTCAGCTT......................................................................... 20 1 1 164.00 164 105 1 0 57 0 1
....................................................................................................................................................TAGCACCATGCGATTCAGCTT......................................................................... 21 2 1 158.00 158 151 2 3 0 2 0
....................................................................................................................................................TGGTACCATGAGATTCAGCTC......................................................................... 21 2 1 152.00 152 152 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGTTC......................................................................... 21 1 1 149.00 149 137 6 5 0 0 1
.........................................................................ACTGAATTCTCGTGGGTCTG..................................................................................................................................................... 20 0 1 140.00 140 4 16 9 77 3 31
....................................................................................................................................................TAGCACCATGGGATTCAGCTC......................................................................... 21 1 1 134.00 134 107 14 5 1 5 2
....................................................................................................................................................TAGCACTATGAGATTCAGCTC......................................................................... 21 1 1 134.00 134 110 10 11 0 2 1
....................................................................................................................................................TAGCATCATGAGATTCAGCTC......................................................................... 21 1 1 133.00 133 117 5 2 0 7 2
....................................................................................................................................................TACCACCATGAGCTTCAGCTC......................................................................... 21 2 1 133.00 133 133 0 0 0 0 0
.....................................................................................................................................................TACACCATGAGATTCAGCTC......................................................................... 20 2 1 133.00 133 132 0 0 0 0 1
....................................................................................................................................................TAGCACCGTGAGATTCAGCTC......................................................................... 21 1 1 132.00 132 91 15 15 0 8 3
...................................................................................................................................................CGAGCACCATGAGATTCAGCTT......................................................................... 22 3 1 127.00 127 127 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCACCTC......................................................................... 21 1 1 126.00 126 110 8 3 0 3 2
....................................................................................................................................................TAGCACCATAAGATTCAGCTC......................................................................... 21 1 1 121.00 121 88 1 19 0 10 3
....................................................................................................................................................TAGCACGATGAGATTCAGCTC......................................................................... 21 1 1 120.00 120 116 2 0 0 1 1
....................................................................................................................................................TAGCACCATGAGGTTCAGCTC......................................................................... 21 1 1 119.00 119 82 17 8 1 10 1
....................................................................................................................................................TAGCGCCATGAGATTCAGCTC......................................................................... 21 1 1 113.00 113 89 10 7 0 6 1
....................................................................................................................................................TAGCACCATTAGATTCAGCTC......................................................................... 21 1 1 112.00 112 101 1 5 2 1 2
....................................................................................................................................................CAGCACCATGAGATTCAGCTT......................................................................... 21 2 1 110.00 110 108 1 1 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCAC......................................................................... 21 1 1 105.00 105 99 5 1 0 0 0
....................................................................................................................................................TAGCACCATGAGACTCAGCTC......................................................................... 21 1 1 102.00 102 68 17 10 1 3 3
....................................................................................................................................................TAGCACCCTGAGATTCAGCTT......................................................................... 21 2 1 100.00 100 98 0 0 0 2 0
....................................................................................................................................................TAGCACCATGACATTCAGCTC......................................................................... 21 1 1 100.00 100 86 6 6 0 2 0
....................................................................................................................................................TAGCACCATGAGCTTCAGCTT......................................................................... 21 2 1 99.00 99 90 0 6 0 3 0
...................................................................................................................................................CTATCACCATGAGATTCAGCTC......................................................................... 22 2 1 98.00 98 98 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATCCAGCTC......................................................................... 21 1 1 96.00 96 73 17 4 0 2 0
....................................................................................................................................................TAGCACCATGAGATTCAGCGC......................................................................... 21 1 1 95.00 95 54 17 12 0 12 0
....................................................................................................................................................TAGCACCATGAGATTCCGCTC......................................................................... 21 1 1 91.00 91 6 19 52 0 14 0
....................................................................................................................................................TAGTACCATGAGATTCAGCTCT........................................................................ 22 1 1 86.00 86 85 0 0 0 0 1
....................................................................................................................................................TAGCACCATGAGTTTCAGCTC......................................................................... 21 1 1 84.00 84 6 48 24 0 6 0
.....................................................................................................................................................AGAACCATGAGATTCAGCTC......................................................................... 20 1 1 83.00 83 83 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAACTC......................................................................... 21 1 1 82.00 82 66 3 8 0 2 3
....................................................................................................................................................TAGCACCATGAGATTTAGCTT......................................................................... 21 2 1 81.00 81 79 0 1 0 1 0
....................................................................................................................................................TACCACCATGAGATTCAGCTCT........................................................................ 22 1 1 81.00 81 81 0 0 0 0 0
....................................................................................................................................................TATCACCATGAGATTCAGCTT......................................................................... 21 2 1 77.00 77 73 1 2 1 0 0
...................................................................................................................................................CTAGCACCATGAGATTCAGCT.......................................................................... 21 1 1 75.00 75 73 0 1 1 0 0
....................................................................................................................................................TAGTACCATGAGATTCAGCT.......................................................................... 20 1 1 75.00 75 73 0 2 0 0 0
....................................................................................................................................................TACCACCATGCGATTCAGCTC......................................................................... 21 2 1 74.00 74 74 0 0 0 0 0
..........................................................................CTGAATTCTCGTGGGTCTGC.................................................................................................................................................... 20 0 1 72.00 72 0 0 1 71 0 0
....................................................................................................................................................TACCACCCTGAGATTCAGCTC......................................................................... 21 2 1 70.00 70 70 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTC....................................................................................................................................................... 18 0 1 69.00 69 20 15 21 9 0 4
....................................................................................................................................................TAGCACCATGAGATTCAGCTCTT....................................................................... 23 1 1 69.00 69 14 24 25 3 2 1
..................................................................................................................................................CCTAGCACCATGAGATTCAGCTC......................................................................... 23 2 1 69.00 69 69 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTTA........................................................................ 22 2 1 68.00 68 47 5 5 8 0 3
...................................................................................................................................................CTAGCACCATGAGATTCAGCTCT........................................................................ 23 1 1 67.00 67 65 0 0 2 0 0
....................................................................................................................................................GAGCACCATGAGATTCAGCTT......................................................................... 21 2 1 66.00 66 66 0 0 0 0 0
....................................................................................................................................................TAGCACCATGCGCTTCAGCTC......................................................................... 21 2 1 65.00 65 62 1 2 0 0 0
....................................................................................................................................................TAGCACCATGAGAGTCAGCTC......................................................................... 21 1 1 65.00 65 41 14 8 0 2 0
....................................................................................................................................................TAGTACCCTGAGATTCAGCTC......................................................................... 21 2 1 63.00 63 63 0 0 0 0 0
....................................................................................................................................................TGGCACCATGAGATTCAGCT.......................................................................... 20 1 1 62.00 62 58 0 1 0 1 2
....................................................................................................................................................TACCACCATGAGATTCAGCTCC........................................................................ 22 2 1 61.00 61 61 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTAAGCTC......................................................................... 21 1 1 59.00 59 26 17 7 0 9 0
....................................................................................................................................................TAGCACCATGAAATTCAGCTC......................................................................... 21 1 1 55.00 55 40 0 7 4 4 0
....................................................................................................................................................AAGCACCATGAGATTCAGCTT......................................................................... 21 2 1 55.00 55 55 0 0 0 0 0
...................................................................................................................................................TTAGCACCATGAGATTCAGCTC......................................................................... 22 1 1 55.00 55 53 0 0 2 0 0
....................................................................................................................................................TAGCACAATGAGATTCAGCTC......................................................................... 21 1 1 54.00 54 28 11 4 0 8 3
................................................................................................................................................GGTCTAGCACCATGAGATTCAGCTC......................................................................... 25 3 1 49.00 49 49 0 0 0 0 0
....................................................................................................................................................TACCACCATGAGATTCAGCTTT........................................................................ 22 2 1 48.00 48 48 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTCG........................................................................ 22 1 1 48.00 48 12 25 9 0 0 2
....................................................................................................................................................TGGCACCATGAGATTCAGCTCT........................................................................ 22 1 1 47.00 47 47 0 0 0 0 0
...................................................................................................................................................CTAGCACCATGAGATTCAGCTCC........................................................................ 23 2 1 47.00 47 47 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGATC......................................................................... 21 1 1 45.00 45 23 13 7 0 2 0
.....................................................................TGGAACTGAATTCTCGTGGGTCT...................................................................................................................................................... 23 0 1 44.00 44 30 2 1 10 0 1
....................................................................................................................................................TGGCACCATGAGATTCAGCTCC........................................................................ 22 2 1 44.00 44 44 0 0 0 0 0
....................................................................................................................................................TGCCACCATGAGATTCAGCTC......................................................................... 21 2 1 43.00 43 43 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGCT................................................................................................................................................... 22 1 1 43.00 43 8 7 8 13 1 6
....................................................................................................................................................TTGTACCATGAGATTCAGCTC......................................................................... 21 2 1 43.00 43 43 0 0 0 0 0
....................................................................................................................................................TAGCTCCATGAGATTCAGCTT......................................................................... 21 2 1 42.00 42 42 0 0 0 0 0
....................................................................................................................................................TAGTACCATGAGATTCAGCTCC........................................................................ 22 2 1 42.00 42 42 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTTC.................................................................................................................................................... 21 1 1 42.00 42 2 10 30 0 0 0
....................................................................................................................................................TGGCACCATGCGATTCAGCTC......................................................................... 21 2 1 41.00 41 41 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGCAT.................................................................................................................................................. 23 1 1 41.00 41 4 0 3 33 0 1
....................................................................................................................................................TAGCACCTTGAGATTCAGCTC......................................................................... 21 1 1 40.00 40 36 2 0 0 1 1
....................................................................................................................................................TAACACCATGAGATTCAGCTT......................................................................... 21 2 1 39.00 39 36 1 1 0 1 0
......................................................................................................................................................GCACCATGAGATTCAGCTC......................................................................... 19 0 1 38.00 38 25 1 1 6 2 3
...............................................................................................................................................CTATCTAGCACCATGAGATTCAGCTC......................................................................... 26 3 1 38.00 38 38 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGAATCAGCTC......................................................................... 21 1 1 37.00 37 28 4 3 0 1 1
................................................................................................................................................GATTTAGCACCATGAGATTCAGCTC......................................................................... 25 3 1 37.00 37 37 0 0 0 0 0
....................................................................................................................................................TAGCACCATGATATTCAGCTC......................................................................... 21 1 1 37.00 37 26 4 3 0 1 3
..................................................................................................................................................TCTAGCACCATGAGATTCAGCTT......................................................................... 23 2 1 36.00 36 36 0 0 0 0 0
....................................................................................................................................................TAGTACCATGAGATTCAGCTTT........................................................................ 22 2 1 35.00 35 35 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCCT......................................................................... 21 2 1 35.00 35 31 2 1 1 0 0
...................................................................................................................................................ATAGCACCATGAGATTCAGCTC......................................................................... 22 1 1 34.00 34 31 0 0 3 0 0
.........................................................................ACCGAATTCTCGTGGGTCTGCA................................................................................................................................................... 22 1 1 33.00 33 31 1 0 1 0 0
.................................................................................................................................................AGCTAGCACCATGAGATTCAGCTC......................................................................... 24 3 1 33.00 33 31 0 0 2 0 0
....................................................................................................................................................TAGCACCATGAGATTCGGCTT......................................................................... 21 2 1 33.00 33 29 1 1 1 0 1
.........................................................................AGTGAATTCTCGTGGGTCTGCA................................................................................................................................................... 22 1 1 33.00 33 33 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTAA........................................................................ 22 2 1 33.00 33 23 0 0 10 0 0
.....................................................................................................................................................AGCTCCATGAGATTCAGCTC......................................................................... 20 1 1 33.00 33 33 0 0 0 0 0
...................................................................................................................................................CCAGCACCATGAGATTCAGCTC......................................................................... 22 2 1 32.00 32 32 0 0 0 0 0
....................................................................................................................................................TAGTACCATGAGCTTCAGCTC......................................................................... 21 2 1 32.00 32 32 0 0 0 0 0
....................................................................................................................................................TAGTACCATGCGATTCAGCTC......................................................................... 21 2 1 31.00 31 31 0 0 0 0 0
....................................................................................................................................................TAGCAGCATGAGATTCAGCTT......................................................................... 21 2 1 31.00 31 29 1 1 0 0 0
.....................................................................................................................................................ATAACCATGAGATTCAGCTC......................................................................... 20 2 1 31.00 31 31 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCT...................................................................................................................................................... 19 0 1 30.00 30 3 5 2 11 1 8
.....................................................................................................................................................TGCACCATGAGATTCAGCTC......................................................................... 20 1 1 30.00 30 29 0 0 0 0 1
....................................................................................................................................................TAGCACCATGAGATACAGCTC......................................................................... 21 1 1 30.00 30 24 4 1 0 1 0
....................................................................................................................................................TAGCACCCTGAGATTCATCTC......................................................................... 21 2 1 29.00 29 29 0 0 0 0 0
....................................................................................................................................................TAGCACCATGCGATTCAGCT.......................................................................... 20 1 1 28.00 28 22 2 2 0 2 0
...................................................................................................................................................CTAGCACCATGAGATTCAGCTA......................................................................... 22 2 1 28.00 28 28 0 0 0 0 0
....................................................................................................................................................TAGCAACATGAGATTCAGCTC......................................................................... 21 1 1 28.00 28 4 8 9 0 7 0
....................................................................................................................................................TAGCACCACGAGATTCAGCTT......................................................................... 21 2 1 28.00 28 25 1 1 0 1 0
....................................................................................................................................................TAGTACCATGAGATTTAGCTC......................................................................... 21 2 1 28.00 28 28 0 0 0 0 0
....................................................................................................................................................TGGCACCATGAGATTCAGCTTT........................................................................ 22 2 1 27.00 27 27 0 0 0 0 0
....................................................................................................................................................TAGAACCATGAGATTCAGCTC......................................................................... 21 1 1 27.00 27 12 6 5 1 1 2
....................................................................................................................................................TAGCACCCTGCGATTCAGCTC......................................................................... 21 2 1 27.00 27 25 0 1 0 1 0
...................................................................................................................................................CTAGCACAATGAGATTCAGCTC......................................................................... 22 2 1 27.00 27 27 0 0 0 0 0
...................................................................................................................................................CGATCACCATGAGATTCAGCTC......................................................................... 22 3 2 26.50 53 53 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTTAGTTC......................................................................... 21 2 1 26.00 26 26 0 0 0 0 0
.....................................................................................................................................................ATCACCATGAGATTCAGCTT......................................................................... 20 2 1 26.00 26 26 0 0 0 0 0
....................................................................................................................................................TAGCACCCTGCGCTTCAGCTC......................................................................... 21 3 2 25.50 51 49 0 2 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAG............................................................................ 18 0 1 25.00 25 0 8 9 1 4 3
....................................................................................................................................................TACCACCATGAGATTCAGCC.......................................................................... 20 2 1 25.00 25 25 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTCAA....................................................................... 23 2 1 24.00 24 13 0 1 10 0 0
....................................................................................................................................................TACCACCATGAGATTCAGCTA......................................................................... 21 2 1 24.00 24 24 0 0 0 0 0
....................................................................................................................................................TAGCACCATGCGATTCAGCTCT........................................................................ 22 1 1 24.00 24 17 1 4 0 2 0
....................................................................................................................................................TAGCACGATGAGATTCAGCTT......................................................................... 21 2 1 24.00 24 23 0 0 0 1 0
....................................................................................................................................................TAGTACCATGAGATTCAGCC.......................................................................... 20 2 1 24.00 24 24 0 0 0 0 0
....................................................................................................................................................TATTACCATGAGATTCAGCTC......................................................................... 21 2 1 24.00 24 24 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATGCAGCTC......................................................................... 21 1 1 23.00 23 6 10 3 0 4 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...................................................................... 24 2 1 23.00 23 1 13 6 1 0 2
....................................................................................................................................................TAGCACCATGAGATTGAGCTC......................................................................... 21 1 1 23.00 23 17 3 1 0 2 0
....................................................................................................................................................TAGCACCATCAGATTCAGCTC......................................................................... 21 1 1 22.00 22 7 7 6 0 2 0
.....................................................................................................................................................AGCACCATGAGATTCAGCT.......................................................................... 19 0 1 22.00 22 11 0 0 10 0 1
....................................................................................................................................................TACCACCATGAGATTCAGCTCA........................................................................ 22 2 1 22.00 22 22 0 0 0 0 0
....................................................................................................................................................TGGCACCATGAGCTTCAGCTC......................................................................... 21 2 1 21.00 21 21 0 0 0 0 0
....................................................................................................................................................TGGCACCATGAGATTCAGCC.......................................................................... 20 2 1 21.00 21 21 0 0 0 0 0
.....................................................................................................................................................AGCACCATGAGATTCAGCTCT........................................................................ 21 0 1 21.00 21 9 0 0 11 1 0
....................................................................................................................................................TAGCACCATGTGATTCAGCTC......................................................................... 21 1 1 20.00 20 11 5 1 0 3 0
....................................................................................................................................................TAGCATCATGAGATTCAGCTT......................................................................... 21 2 1 20.00 20 17 3 0 0 0 0
....................................................................................................................................................TGTCACCATGAGATTCAGCTC......................................................................... 21 2 1 20.00 20 20 0 0 0 0 0
...................................................................................................................................................TGAGCACCATGAGATTCAGCTC......................................................................... 22 2 1 20.00 20 20 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGCAA.................................................................................................................................................. 23 1 1 19.00 19 2 3 0 14 0 0
...................................................................................................................................................CTAGTACCATGAGATTCAGCTC......................................................................... 22 2 1 19.00 19 19 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGCTTCAGCTG......................................................................... 21 2 1 19.00 19 18 0 0 0 1 0
....................................................................................................................................................TAGCACCCTGAGATTCAGCT.......................................................................... 20 1 1 19.00 19 18 0 1 0 0 0
...................................................................................................................................................TCAGCACCATGAGATTCAGCTC......................................................................... 22 2 1 19.00 19 19 0 0 0 0 0
....................................................................................................................................................TTGCACCATGAGATTCAGCT.......................................................................... 20 1 1 18.00 18 18 0 0 0 0 0
....................................................................................................................................................TAGGACCATGAGATTCAGCTC......................................................................... 21 1 1 18.00 18 8 0 5 0 3 2
...................................................................................................................................................CTAGCACCATGAGATTCAGTTC......................................................................... 22 2 1 18.00 18 18 0 0 0 0 0
...................................................................................................................................................CTAGCACCATGAGATTCATCTC......................................................................... 22 2 1 18.00 18 18 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGT.................................................................................................................................................... 21 1 1 18.00 18 3 4 3 2 0 6
....................................................................................................................................................TAGCACCATTAGATTCAGCTT......................................................................... 21 2 1 18.00 18 17 0 1 0 0 0
....................................................................................................................................................TACCACCATGAGATTTAGCTC......................................................................... 21 2 1 18.00 18 17 0 1 0 0 0
..................................................................................................................................................TCCAGCACCATGAGATTCAGCTC......................................................................... 23 2 1 18.00 18 18 0 0 0 0 0
....................................................................................................................................................TAGCACCAGGAGATTCAGCTC......................................................................... 21 1 1 18.00 18 13 2 3 0 0 0
.....................................................................................................................................................AGCACCATGAGATTCAGCTCC........................................................................ 21 1 1 18.00 18 16 0 0 2 0 0
.................................................................................................................................................ATCTAGCACCATGAGATTCAGCTT......................................................................... 24 3 1 17.00 17 17 0 0 0 0 0
....................................................................................................................................................TAGCACCATAAGATTCAGCTT......................................................................... 21 2 1 17.00 17 12 0 2 1 2 0
..................................................................................................................................................TGTAGCACCATGAGATTCAGCTC......................................................................... 23 0 1 17.00 17 17 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCTGCTC......................................................................... 21 1 1 17.00 17 7 5 1 0 3 1
....................................................................................................................................................TAGCACCATGAGATTCAGCTTTT....................................................................... 23 2 1 17.00 17 12 2 0 3 0 0
....................................................................................................................................................TAGCACCATGAGATTCATCTT......................................................................... 21 2 1 17.00 17 14 1 2 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGGTC......................................................................... 21 1 1 17.00 17 10 4 2 0 1 0
....................................................................................................................................................TAGCACCATGAGCTTCAGCT.......................................................................... 20 1 1 17.00 17 11 1 4 0 1 0
....................................................................................................................................................TAGTACCATGAGATTCAGCTCA........................................................................ 22 2 1 17.00 17 17 0 0 0 0 0
....................................................................................................................................................TCGCACCATGAGATTCAGCTC......................................................................... 21 1 1 17.00 17 5 5 7 0 0 0
....................................................................................................................................................TACTACCATGAGATTCAGCTT......................................................................... 21 3 4 16.25 65 65 0 0 0 0 0
....................................................................................................................................................TTGCACCATGAGATTCAGCTCT........................................................................ 22 1 1 16.00 16 15 0 0 0 1 0
....................................................................................................................................................TAGTACGATGAGATTCAGCTC......................................................................... 21 2 1 16.00 16 16 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGTTT......................................................................... 21 2 1 16.00 16 12 3 1 0 0 0
....................................................................................................................................................TAGCACCATGAGGTTCAGCTT......................................................................... 21 2 1 16.00 16 12 1 1 0 2 0
....................................................................................................................................................TAGCACCATGAGATTCCGCT.......................................................................... 20 1 1 16.00 16 0 4 10 0 2 0
...........................................................................TGAATTCTCGTGGGTCTGCA................................................................................................................................................... 20 0 1 16.00 16 0 0 0 16 0 0
....................................................................................................................................................TAGCACTATGAGATTCAGCTT......................................................................... 21 2 1 15.00 15 14 0 0 1 0 0
....................................................................................................................................................TACCACCCTGAGATTCAGCTT......................................................................... 21 3 1 15.00 15 15 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTTT...................................................................................................................................................... 19 1 1 15.00 15 0 1 3 6 0 5
....................................................................................................................................................TAGCACCATGAGATTCACCTT......................................................................... 21 2 1 15.00 15 15 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGCTTCATCTC......................................................................... 21 2 1 15.00 15 15 0 0 0 0 0
...................................................................................................................................................CTCGCACCATGAGATTCAGCTC......................................................................... 22 2 1 15.00 15 15 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGCTACAGCTC......................................................................... 21 2 1 15.00 15 15 0 0 0 0 0
...................................................................................................................................................CTAGCACCATGAGATTCAGCTCA........................................................................ 23 2 1 15.00 15 14 0 0 1 0 0
.........................................................................AGTGAATTCTCGTGGGTCTGC.................................................................................................................................................... 21 1 1 15.00 15 14 1 0 0 0 0
....................................................................................................................................................TAGTACCATGAGATTCAGTTC......................................................................... 21 2 1 14.00 14 14 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGTTTCAGCTT......................................................................... 21 2 1 14.00 14 2 5 6 0 1 0
....................................................................................................................................................TGGCACCATGAGATTCAGCTA......................................................................... 21 2 1 14.00 14 14 0 0 0 0 0
...................................................................................................................................................CTAGCACCATGAGATTCAGCC.......................................................................... 21 2 1 14.00 14 14 0 0 0 0 0
...................................................................................................................................................CTAGCACCATGAGATTCAGCTTT........................................................................ 23 2 1 14.00 14 13 1 0 0 0 0
....................................................................................................................................................TAGCGCCATGAGATTCAGCTT......................................................................... 21 2 1 14.00 14 12 1 0 0 0 1
......................................................................................................................................................TCACCATGAGATTCAGCTC......................................................................... 19 1 1 14.00 14 14 0 0 0 0 0
....................................................................................................................................................GAGCACCATGAGATTCAGCT.......................................................................... 20 1 1 13.00 13 11 0 2 0 0 0
....................................................................................................................................................TAGCCCCATGAGATTCAGCTC......................................................................... 21 1 1 13.00 13 4 6 3 0 0 0
.....................................................................................................................................................AGCACCATGAGATTCAGCTTT........................................................................ 21 1 1 13.00 13 9 0 0 4 0 0
...................................................................................................................................................CTATCACCATGAGATTCAGCTT......................................................................... 22 3 1 13.00 13 13 0 0 0 0 0
................................................................................................................................................ATCCTAGCACCATGAGATTCAGCTC......................................................................... 25 3 1 13.00 13 13 0 0 0 0 0
....................................................................................................................................................TAGCACCATGGGATTCAGCTT......................................................................... 21 2 1 13.00 13 11 1 0 0 1 0
....................................................................................................................................................TAGCACCATGAGATTCACTC.......................................................................... 20 3 1 13.00 13 13 0 0 0 0 0
....................................................................................................................................................TACCACCATGAGATTCAGCCC......................................................................... 21 2 1 12.00 12 12 0 0 0 0 0
.........................................................................ACTTAATTCTCGTGGGTCTGCA................................................................................................................................................... 22 1 1 12.00 12 12 0 0 0 0 0
...................................................................................................................................................CAAGCACCATGAGATTCAGCTC......................................................................... 22 2 1 12.00 12 12 0 0 0 0 0
....................................................................................................................................................TGGCACCATGAGATTTAGCTC......................................................................... 21 2 1 12.00 12 12 0 0 0 0 0
....................................................................................................................................................TATCACCATGAGATTCAGCT.......................................................................... 20 1 1 12.00 12 7 0 3 0 0 2
...................................................................................................................................................TTAGCACCATGAGATTCAGCTT......................................................................... 22 2 1 12.00 12 12 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTT....................................................................................................................................................... 18 1 1 12.00 12 0 2 5 5 0 0
....................................................................................................................................................TAGCACCATGAGTTTCAGCT.......................................................................... 20 1 1 12.00 12 1 5 6 0 0 0
....................................................................................................................................................TAGCACCCTGAGATTCGGCTC......................................................................... 21 2 1 12.00 12 12 0 0 0 0 0
....................................................................................................................................................TAGTACCATGAGATTCAGCCC......................................................................... 21 2 1 12.00 12 12 0 0 0 0 0
...................................................................................................................................................CTAGCACCATGAGATTCAGC........................................................................... 20 1 1 12.00 12 12 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGACTCAGCTT......................................................................... 21 2 1 12.00 12 10 1 1 0 0 0
...................................................................................................................................................CTACCACCATGAGATTCAGCTC......................................................................... 22 2 1 12.00 12 12 0 0 0 0 0
....................................................................................................................................................TTGCACCATGAGATTCAGCTCC........................................................................ 22 2 1 12.00 12 12 0 0 0 0 0
....................................................................................................................................................TAGTACCATGAGATTCAGCTA......................................................................... 21 2 2 11.50 23 23 0 0 0 0 0
....................................................................................................................................................TAGCACCATGCGATTCAGCTTT........................................................................ 22 2 1 11.00 11 10 0 1 0 0 0
....................................................................................................................................................TTGCACCATGAGCTTCAGCTC......................................................................... 21 2 1 11.00 11 11 0 0 0 0 0
....................................................................................................................................................TAGCACCATGCGATTCAGCC.......................................................................... 20 2 1 11.00 11 11 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCGT......................................................................... 21 2 1 11.00 11 7 3 0 0 0 1
.........................................................................ACCGAATTCTCGTGGGTCTGC.................................................................................................................................................... 21 1 1 11.00 11 9 1 0 0 0 1
....................................................................................................................................................CAGTACCATGAGATTCAGCTC......................................................................... 21 2 1 11.00 11 11 0 0 0 0 0
...................................................................................................................................................CGAGCACCATGAGATTCAGCTCT........................................................................ 23 2 1 11.00 11 11 0 0 0 0 0
...................................................................................................................................................CTAGCGCCATGAGATTCAGCTC......................................................................... 22 2 1 11.00 11 11 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTCTA....................................................................... 23 1 1 11.00 11 4 2 1 2 2 0
....................................................................................................................................................TTGCACCCTGAGATTCAGCTC......................................................................... 21 2 1 11.00 11 11 0 0 0 0 0
....................................................................................................................................................TAATACCATGAGATTCAGCTC......................................................................... 21 2 1 11.00 11 10 1 0 0 0 0
....................................................................................................................................................TAGCACCATGCGATTCCGCTC......................................................................... 21 2 1 11.00 11 0 2 9 0 0 0
....................................................................................................................................................TGGCACCCTGAGATTCAGCTC......................................................................... 21 2 2 10.50 21 21 0 0 0 0 0
............................................................................GAATTCTCGTGGGTCTGCA................................................................................................................................................... 19 0 1 10.00 10 0 0 0 10 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGCAC.................................................................................................................................................. 23 1 1 10.00 10 2 1 0 7 0 0
.....................................................................TGGAACTGAATTCTCGTGGGTCC...................................................................................................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
....................................................................................................................................................TACCACCATGAGATTCAGCTG......................................................................... 21 2 1 10.00 10 10 0 0 0 0 0
....................................................................................................................................................TACCACCACGAGATTCAGCTC......................................................................... 21 2 1 10.00 10 10 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATCCAGCTT......................................................................... 21 2 1 10.00 10 10 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCCGCTT......................................................................... 21 2 1 10.00 10 4 1 5 0 0 0
....................................................................................................................................................TGGCACCATGAGATTCAGCTCA........................................................................ 22 2 1 10.00 10 9 0 0 0 1 0
....................................................................................................................................................CAGCACCATGAGATTCAGCT.......................................................................... 20 1 1 10.00 10 7 1 2 0 0 0
....................................................................................................................................................TATCACCATGAGATTCAGCTCT........................................................................ 22 1 1 10.00 10 8 1 1 0 0 0
.........................................................................ATTGAATTCTCGTGGGTCTGCA................................................................................................................................................... 22 1 1 10.00 10 8 1 0 1 0 0
....................................................................................................................................................TAGCACCATGAGATTTAGCT.......................................................................... 20 1 1 10.00 10 9 0 1 0 0 0
................................................................................................................................................GATCTAGCACCATGAGATTCAGCT.......................................................................... 24 3 1 10.00 10 10 0 0 0 0 0
................................................................................................................................................CATCTAGCACCATGAGATTCAGCTC......................................................................... 25 3 1 10.00 10 10 0 0 0 0 0
....................................................................................................................................................TACCACCATGAGATTCAGC........................................................................... 19 1 1 10.00 10 10 0 0 0 0 0
.................................................................................................................................................ATATAGCACCATGAGATTCAGCTC......................................................................... 24 2 1 10.00 10 10 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGCTCCAGCTC......................................................................... 21 2 1 10.00 10 9 1 0 0 0 0
....................................................................................................................................................TAGCACCGTGAGTTTCAGCTC......................................................................... 21 2 1 9.00 9 0 4 4 0 1 0
................................................................................................................................................GATCTAGCACCATGAGATTCAGCTCT........................................................................ 26 3 1 9.00 9 9 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTCTC....................................................................... 23 1 1 9.00 9 7 1 1 0 0 0
.........................................................................ACTAAATTCTCGTGGGTCTGCA................................................................................................................................................... 22 1 1 9.00 9 6 1 1 1 0 0
.........................................................................ACTGAATTCTCTTGGGTCTGCA................................................................................................................................................... 22 1 1 9.00 9 1 0 1 6 0 1
....................................................................................................................................................TAGCACCATGAGCTTCAGTTC......................................................................... 21 2 1 9.00 9 9 0 0 0 0 0
.....................................................................................................................................................AACACCATGAGATTCAGCTC......................................................................... 20 1 1 9.00 9 7 1 0 0 1 0
....................................................................................................................................................AAGCACCATGAGATTCAGCT.......................................................................... 20 1 1 9.00 9 9 0 0 0 0 0
....................................................................................................................................................CAGCACCATGCGATTCAGCTC......................................................................... 21 2 1 9.00 9 8 0 1 0 0 0
.........................................................................ACTGAATTCTAGTGGGTCTGCA................................................................................................................................................... 22 1 1 9.00 9 7 0 0 1 1 0
....................................................................................................................................................TAGCACCATGAGATTCAGCAT......................................................................... 21 2 1 9.00 9 9 0 0 0 0 0
....................................................................................................................................................TGGCACCATGAGATTCAGTTC......................................................................... 21 2 1 9.00 9 9 0 0 0 0 0
....................................................................................................................................................TACCACCATGACATTCAGCTC......................................................................... 21 2 1 9.00 9 9 0 0 0 0 0
.....................................................................................................................................................ATCACCATGAGATTCAGCTCT........................................................................ 21 1 1 9.00 9 9 0 0 0 0 0
...................................................................................................................................................CGAGCACAATGAGATTCAGCTC......................................................................... 22 3 1 9.00 9 9 0 0 0 0 0
....................................................................................................................................................TAGCACCCTGAGCTTCAGCTC......................................................................... 21 2 1 9.00 9 8 0 1 0 0 0
....................................................................................................................................................TAGCACCATGAGATTCAGCTTTA....................................................................... 23 2 1 9.00 9 6 0 1 1 1 0
...................................................................................................................................................CGAGCACCATGAGATTCAGCTCC........................................................................ 23 3 1 9.00 9 9 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGATTTAGCTCT........................................................................ 22 1 1 9.00 9 8 0 1 0 0 0
....................................................................................................................................................TAGTACCACGAGATTCAGCTC......................................................................... 21 2 2 8.50 17 17 0 0 0 0 0
....................................................................................................................................................TAGCACCATGAGACTCAGCT.......................................................................... 20 1 1 8.00 8 3 3 2 0 0 0

Anti-sense strand reads

CGAAGTTCATATTATAAATACATAAGTGTACGGCTGTTTATAGTTACCTATGGTAATTTTTTAAGTAAAACCTTGACTTAAGAGCACCCAGACGTCACGTGACATTGGCAACGTCTCCCGTTAACAAGTTTAACTTTAACTTTAAAACATCGTGGTACTCTAAGTCGAGACCGCACTCAAAGTTTGTACGTAAGTGGTTTTTTACTTTAAGTTCGTTTTTTATTTTTCTTTTGTTTTATTTA

**********************************************************((.((((((...(((.(((((.((((((((..((((((..((.((.(((.(((((.....))))).)))))...))...........))))))..))))))))))))).)))...))))))))...********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body
...........................................................................................TCTTGACGTGACATTGGCAA................................................................................................................................... 20 3 9 0.11 1 1
.....................................................................ACGTTCACTCAAGAGCACC.......................................................................................................................................................... 19 3 14 0.07 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6540:1739208-1739449 - dmo_338 confident GCTTCAAGTATAATATTTATGTA------------TTCACAT-------GCCGACAA---AT--ATC-AA------TGGATA--CCATTA----------------------------AAAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTGTAACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAGTTTCAA-ACATGCATTCACC--------AA-----A------------------------------------------------AAATGAAATTCAAGC---------------AAAAAATAAAAAGAAAA-----CAA-AATA--AAT
droVir3 scaffold_13047:6339606-6339765 + dvi-mir-998 Known_mirbase ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACTAAGAACCAACCGTTAATCAAGCGC---------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:11660071-11660311 + dgr_78 confident -------------------------------------------------GCCGCCTTTATGTTGCTCAAA------TGG-GA--CCATTCTGTATATCAATCCAATCAACGCGCAAGCGCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACC--------AA-----ATC----------------------------------------------AAATCAAA-TCAATCAAAATAAAAATC---------------GA--------CAA-AATT--AAT
droWil2 scf2_1100000004902:8480189-8480389 + dwi_204 confident A----------------------------------------------------------------------------------------------------------------------AAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT-GG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCATC--------AC-----A------------------------------------------------AA-------------AGAATAA-AACCACTAAAAAACAATAAGAAAATGTTACAA-CAAA--ACG
dp5 2:23856847-23856988 - ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT-------------T----CC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_3:6633412-6633553 - ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT-------------T----CC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:5676212-5676385 + ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACCTGCTGCTGCTGCTGCTCT----CC-AGTTTGGCCAATTTTGTTAAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACCAAA----AAC-----ATCTCTCGC---------------------------------------------------------------------------------------------------------
droBip1 scf7180000396708:3137664-3137889 - G-------TATAATATGTATGTATGTATATATATATCGACATATAACCCGACGCCTC---GTC-AGC-AA------TCGTCC--TC-GTG----------------------------TCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTCT----CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCTCGC---------------------------------------------------------------------------------------------------------
droKik1 scf7180000302706:728188-728401 + A------------------TGTA------------TCGACATA--ACCCGACGCCTC---GTC-AGC-AAATTCGTTCGTCCTCTC-GTG----------------------------TCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCAACTG-CAACAACACTG--ACC-GCT-------------T----CC-GG--GGGCCAAT--TGTTCATATTTGAGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAAACATGCATCCACCAAAA--CAAC-----ATCTCT------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454096:748474-748620 - ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCT------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491104:156500-156717 - ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCTCGCTCTATCAGCTCTCTCTTCCTCTTCTATGTTTGTCCACGGCAA-------------AAAATAA-AATC---------------GA--------CAATAATTCAAAA
droRho1 scf7180000762316:6973-7127 - ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCTCGCTCTAT----------------------------------------------------------------------------------------------------
droBia1 scf7180000302402:5912501-5912638 - ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAC-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415711:238708-238902 + ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCTCGCTCTGTCAGCTCTCTCT----CCTCAATGTTTGTCCACGGCA-----------------------ATC---------------GA------------------AAT
droEug1 scf7180000409760:942010-942154 + ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGACAACAACACTG--ACC-GCT------------------CCCGG---GGCCAAT--TGTTAAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACC--------AA-----------------------------------------------------------------------------------------------------------------------
dm3 chr3R:17447597-17447734 - dme-mir-998 Known_mirbase ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCAAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:3865005-3865196 + dsi_272 confident A------------TATGTATATA------------TCGACATAAAACCCGCCGCCTC---GTC-AGC-AA------TCGTCC--TC-GTG----------------------------TCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_6:4044345-4044536 + dse_356 confident A------------TATGTATATA------------TCGACATAAAACCCGCCGCCTC---GTC-AGC-AA------TCGTCC--TC-GTG----------------------------TCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------
droYak3 3R:6285162-6285299 - ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:4217730-4217867 + ------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCTTCAAGTATAATATTTATGTA------------TTCACAT-------GCCGACAA---AT--ATC-AA------TGGATA--CCATTA----------------------------AAAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTGTAACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAGTTTCAA-ACATGCATTCACC--------AA-----A------------------------------------------------AAATGAAATTCAAGC---------------AAAAAATAAAAAGAAAA-----CAA-AATA--AATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................211193355.0019335511094423498670091730652763
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................21125206.002520655736229637823119494
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2215606.0056063768681502561006358
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2014889.0048891172185737562719506
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................2212721.00272167248217257186567
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2112014.00201474727234384329293
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................2211341.001341225191812725
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................2011282.00128210031511712
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221756.0075629719310241942
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................201653.0065300116510
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................211587.00587202722194927
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................191462.00462888204144
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................211269.0026926800010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................211232.00232117422080
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC.............................................................................................................................................................221176.00176514314122
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................201164.00164570011051
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................201140.00140773916431
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................20172.00727101000
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................18169.0069902115204
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................23169.0069322524141
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................22168.00688055473
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22148.004800925122
..................................................................................................................................TGGAACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................23144.004410012301
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................22143.00431318786
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................23141.00413303041
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................19138.00386211253
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................21135.00351012310
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................22133.003310000230
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................19130.00301112538
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................18125.0025149803
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................23124.002410010130
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................................................................................................................................24123.00231061312
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................19122.002210000111
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................21121.00211110090
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A.......................................................................................................................................................................................................................................................................23119.00191400320
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................21118.0018203436
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCC.............................................................................................................................................................21118.00182000160
................................................................................................................................................................................................................................................TGTAGCACCATGAGATTCAGCTC..............................................................................................................................................................23117.00170000170
........................................................................................................................................TGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................20116.00161600000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCACTC...............................................................................................................................................................20113.00130000130
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................18112.0012505200
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGT..............................................................................................................................................................21111.0011000371
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................23111.0011221240
.........................................................................................................................................GAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................19110.00101000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................23110.0010700120
..................................................................................................................................TGGAACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................23110.00100000100
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTC............................................................................................................................................................2319.009001170
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAT..............................................................................................................................................................2119.009000090
droVir3
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACTAAGAACCAACCGTTAATCAAGCGC---------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................211304401.003044015432016657754882093671141210459754431143542101603843381100411195614637156410741402147595137692176596377685934527633143942481428196614301480559953322255286548205172158327193333193122145119815412237718234482199411616112918912117957564776658471471870694352141500308152643832218
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................21122520.00225200235839082423115935214939441134154232009027629515048439327517909199451149140692889547611492144722612293001651073683010113314354557732137619318805530819322817382674041577370272239319396
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................20115499.001549902181111615229849229134219692371541589960118141874632159715774785326526476438633698321833921811882451566734930000101221231000148127521265258122881067434282016323343161136131175
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................2219039.00903900100102392038531530851365729806242701148694105120182168328364160379414830453631511042455252674983241291159190300929394533331252015422241449588098801172
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2217534.00753487714776198832402810692010783210232892130313827264321776946942181250223000389641119068144861911408980762110914731397803445623128643923526928329729149125
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................2112641.002641002913511076219222141571115534510713713358161113493118481311714116238012030120000000000030001000018108273616108003113352283745
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2111906.00190657146269341793262313458011121239414541550271140257974409105310211462000111236183234201413104157015652111323178101532133
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................2211755.00175500362819917016032711171161914492013443630605925342059531268798358471600010000001000000005654230181548733803236020807287102
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................2211318.001318001334924233700008231143108148348914201201136716939314256930100031115411200115910300038206500045554422548
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................1811295.00129579498642428194720495100288787541451165974736142502500004270000111110102214121266100000014144814600011
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................191879.008796541232132418721010001711275319261230561614624023000041500000000000000001200331300200038109101100110
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................191784.00784002131511311140206353461452442214131421255314645861512000000102101110002052020083941504310201549226896
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................231686.006860084300000000020000001041131042001160181748127000000000000000000000000181357853400000018646454108
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................201410.00410002152542102000100101102203361220234221101220000000000000000000553881301312000111671518
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC.............................................................................................................................................................221308.00308003431700000000021202430070211433818370310001338000000000001000000001501000000000001110
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................201288.00288396120150922200011647325311325215114110810002600000000000000000000183203803002003000010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................231284.002840051513000000010333931110741287263411335701312180000000000000000000013300424522000116031
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAA...........................................................................................................................................................241274.00274001000000000000000000000001010112011500000000000000000000000000203028210020001435274952
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................231266.00266004101100000000000112203444364235111420491000000000000000000011001014207000000626252638
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................221219.002190033203000000000000020051251561201839102531310000000000000000000000063917900000006151210
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA............................................................................................................................................................231219.0021900130004000001000000000038113100007153582320000000000000000000000005119510000000116712
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAA..............................................................................................................................................................211207.0020700000000000020000000000010010001200031300000000000000000000000000121912000000347292645
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................211206.002060023405501000101101090073437352510215100750100000100000000002250002102240320002541118
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAAA..........................................................................................................................................................251204.0020400000000000000000000000000000000000150200000000000000000000000000212512000000241213440
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................181194.0019400102051731600010010001413864691319413163322112000000000000000000004302410101000010001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA...........................................................................................................................................................241184.0018400602000000000000000000041422101104320250000000000000000000010002017144000000230131825
........................................................................................................................................................................................................................................................CATGAGATTCAGCTC..............................................................................................................................................................151175.001750000000000000000000000000000000000000000000114381682017121312151282500000000000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-........................................................................................................................................................................................................................................................................221145.00145498700000000000000000000000000000000000000000010000010100000101100000000010000101
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................221136.0013600103140000011100120232564381521240847622000000000000000000000106317400000023323
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A.......................................................................................................................................................................................................................................................................231117.0011717120100000000000000000041095100000000010000000000000000000000001261103178115611021
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................18198.0098167004210274000421200440202007114040000020000000000000000000010000000001011200000
......................................................................................................................................ACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................19191.009157000040000000000000010000000110602000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................19175.007500131001010000100000000153133111311102002000000000000000000010001000003010009743
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................20174.007400024111010000011000050110121563801011112000000000000000000002100100000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................................................................................................................................24162.006200200000000000012101211100017143810000103000000000000000000005000010100100001201
.....................................................................................................................................AACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................22161.006100000000000000000000000000000000000000000000000000000000000000610000000000000000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................20160.006000430110010000020001000110013102000000010000000000000000000000000000000000000001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22158.00580011200001000000000020211221351411020014000000000000000000016400022000000001211
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTAA............................................................................................................................................................23158.00580020000000010000100000001200000000049100000000000000000000001002166200000032167
.......................................................................................................................................................................................................................................................CCATGAGATTCAGCTC..............................................................................................................................................................16150.005000000000000000000000000000000000000000000000143153562221211200000000000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-GTG-------C.............................................................................................................................................................................................................................................................26146.00460010220000000000000010012533201221423130000000000000000000000003000000000000011
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................18144.00440251021002100000000010071121060012000010000000000100000000110100000000000011010
......................................................................................................................................ACTGAATTCTCGTGGGTCG............................................................................................................................................................................................................................................................................19142.004252820000110000010000000000000000000000000000000000000000000001100000002000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA............................................................................................................................................................23142.00420000011000010000010000010000000120126411000000000000000000000000025000000014205
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21142.004201380000000000010000000000000000000000000000000000000000000000000000001000010000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTC...........................................................................................................................................................24141.004100000000000000000000400000005351308000002000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTC............................................................................................................................................................23138.00380000100000000000000050000000295900000001000000000000000000000000011300000010000
......................................................................................................................................ACTGAATTCTCGTGGGTCA............................................................................................................................................................................................................................................................................19137.003711250000000000000001100010000040200000101000000000000000000003500000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCT............................................................................................................................................................23135.00350000000001000001000021001000541715000003000000000000000000000102000000000000000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................19134.003400232000001000000000000000000131000000010000000000000000000000000200000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................23133.003301130000000000020020011011001010000000000000000001010000000100400000101000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................21133.00330000205000000000000200041000131201010033000000000000000000010000100000000000101
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................20130.003000270000000000000000000000001000100000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................20130.00300000000000000000001000010010130000101000000000000000000000002100014100000023025
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................20128.00280300060000000020021110000000211103000002000000000000000000000200000000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................21128.00281310010010000022000030300001200300000002000000000000000000001100000000000000010
......................................................................................................................................ACTGAATTCTCGTGGGTA.............................................................................................................................................................................................................................................................................18126.00261250020100000011011001020000100102000001000000000000000000003000000000000000000
.................................................................................................................................................................................................................................................GTAGCACCATGAGATTCAGCTC..............................................................................................................................................................22125.00250030000000000000000000000000000000010000000000000000000000010001010000000004842
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................21125.002500111000000000010010100000111110001000100000000000000000000011000010000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG............................................................................................................................................................23123.00230010102000000010010000010110210200000000000000000000000000000000002000000010114
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-........................................................................................................................................................................................................................................................................22122.00220020213000000001011302010001001000000001000000010100000000000000000000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-GT......................................................................................................................................................................................................................................................................24122.00220100005000000000000000000012001022000020000000000000000000000000200002020000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTG.............................................................................................................................................................22121.00210030003002000020000010000000001310000000000000000000000000001000001100000000020
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGAAA..............................................................................................................................................................21119.00190000000000000000000000000000000000000000000000000000000000000000032100000004252
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCAA...........................................................................................................................................................24119.00190000000000000000000000000100000200010100000000000000000000000000021000000006320
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGA................................................................................................................................................................19118.00180000000000000000000000000000001100001000000000000000000000000000012000000003054
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCC............................................................................................................................................................23118.00180010100000000000000040000001102104000002000000000000000000000100000000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................22116.00161801000000000010100100000000000000000000000000000000000000001100000000000010000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-GTG-------CAC...........................................................................................................................................................................................................................................................28116.00160020000000000000000000000122000010100110000000000000000000000002010000000000011
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTA...........................................................................................................................................................24116.00160000000000000000000010000000422010000001000000000000000000000000300000000000011
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAT............................................................................................................................................................23115.00150000000000000000120000101010200100012100000000000000000000010000001000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-G.......................................................................................................................................................................................................................................................................23113.00130020300000000000010000001010000000000110000000000000000000000000000001010000010
......................................................................................................................................................................................................................................................ACCATGAGATTCAGCTC..............................................................................................................................................................17113.00130000000000000000000000000000000000000000000010000000100000000000120000000020114
........................................................................................................................................TGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................20113.00130130000000000000010000001010010100000000000000000000010100100000000000001000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTCC...........................................................................................................................................................24112.00120000000000000000000020000000211400000002000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT................................................................................................................................................................19112.00120000000100000000000000000000110300000112000000000000000000001000001000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGAA...............................................................................................................................................................20111.00110000000000000000000000000000000000000000000000000000000000000000001100000000135
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAAA.............................................................................................................................................................22111.00110010000000000000000000000000000000000000000000000000000000000000003200000000320
.............................................................................................................................................................GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-AT...................................................................................................................................................................................................35110.00100000000000000000000000000000000000000000000000002010141000100000000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAAA................................................................................................................................................................19110.00100000000000000000000000000000000000101000000000000000000000000000003200000010101
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTGA.............................................................................................................................................................22110.00100001000000000000000010000000000000000000000000000000000000000000012000000011021
......................................................................................................................................ACTGAATTCTCGTGGGTCTGG..........................................................................................................................................................................................................................................................................2119.0093500000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTCC............................................................................................................................................................2318.0080010000000000000000020000000001200000002000000000000000000000000000000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-T.......................................................................................................................................................................................................................................................................2318.0081500000000000001000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAT...........................................................................................................................................................2418.0080000000000000000000000000000030010000001000000000000000000000000001000000000002
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTT..............................................................................................................................................................1818.0080100002010000000000001000000000000000011000000000000000000000000000100000000000
......................................................................................................................................ACTGAATTCTCGTGGGTTC............................................................................................................................................................................................................................................................................1918.0080010000000000000000030000000000101000010000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAC...........................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000010000000003211
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................2318.0080330000000000000000000000000000000000000000000000000000000000000000020000000000
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTT..............................................................................................................................................................1918.0080010001000000000100000001000000310000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTAT............................................................................................................................................................2317.0070000000000000000000000000000041000000100000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAT..............................................................................................................................................................2117.0070000001000000000000000010010010000000010000000000000000000000000001000000000100
droGri2
-------------------------------------------------GCCGCCTTTATGTTGCTCAAA------TGG-GA--CCATTCTGTATATCAATCCAATCAACGCGCAAGCGCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACC--------AA-----ATC----------------------------------------------AAATCAAA-TCAATCAAAATAAAAATC---------------GA--------CAA-AATT--AATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................2111155.001155468687
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................201394.00394155239
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................211340.00340168172
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................221332.0033228646
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................211151.0015110150
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................22181.00816318
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................20139.0039381
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................22133.0033924
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21126.0026260
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................20118.0018180
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................20118.0018126
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................19118.0018180
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................19117.0017125
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................21110.0010100
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2016.00660
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................2314.00431
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................2114.00431
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................1914.00440
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................2213.00321
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................1812.00211
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................1912.00220
........................................................................................................................................TGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2012.00220
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................2011.00101
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTC...........................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................1811.00110
.................................................................................................................................................................................................................................................GTAGCACCATGAGATTCAGCT...............................................................................................................................................................2111.00110
.................................................................................................................................TTGGAACTGAATTCTCGTGGG...............................................................................................................................................................................................................................................................................2111.00101
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................2311.00101
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................2211.00110
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-G.......................................................................................................................................................................................................................................................................2311.00110
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCT...............................................................................................................................................................1811.00110
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................1811.00110
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTCT.............................................................................................................................................................2011.00110
.........................................................................................................................................GAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................1911.00110
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................2311.00110
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................2211.00101
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTGA...........................................................................................................................................................2411.00101
......................................................................................................................................ACTGAATTCTCGTGGGTTA............................................................................................................................................................................................................................................................................1911.00110
.................................................................................................................................................................................................................................................GTAGCACCATGAGATTCAGCTT..............................................................................................................................................................2211.00110
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................1811.00110
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGC................................................................................................................................................................1811.00110
...............................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGCTC..............................................................................................................................................................2411.00110
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TA......................................................................................................................................................................................................................................................................2411.00110
......................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-A.......................................................................................................................................................................................................................................................................2311.00101
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC.............................................................................................................................................................2220.50101
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCCCT................................................................................................................................................................1990.11101
droWil2
A----------------------------------------------------------------------------------------------------------------------AAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT-GG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCATC--------AC-----A------------------------------------------------AA-------------AGAATAA-AACCACTAAAAAACAATAAGAAAATGTTACAA-CAAA--ACGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................21141098.00410982325267032445315184
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2219370.009370830651022355177
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2014309.00430986815522801798
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................2112124.002124983651762205
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................2211423.00142351917618764
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................211641.0064121910552149116
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221527.00527166307207
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................211346.00346014126071
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................181329.0032929070131
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-........................................................................................................................................................................................................................................................................221259.002592590000
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................191202.0020217821417
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................221131.001311627745
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................19193.00932105436
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................20187.008720458311
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................20187.008704301727
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................18151.00510003714
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21139.0039336000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22134.0034023920
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................23130.0030251022
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................19124.0024020814
...............................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGC................................................................................................................................................................22121.0021000183
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................22117.0017151001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................21117.0017000161
......................................................................................................................................ACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................19113.0013120001
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................20111.001108030
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................22111.001101091
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................21111.001191100
.........................................................................................................................................GAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................19110.001091000
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT-...........................................................................................................................................................................................................................29110.0010100000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................2319.00962100
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................2019.00920034
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2018.00808000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCTC.................................................................................................................................................................1827.501500069
...............................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGT................................................................................................................................................................2217.00700070
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---.................................................................................................................................................................................................................................................................2617.00704030
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A.......................................................................................................................................................................................................................................................................2317.00750020
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................1817.00730004
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA............................................................................................................................................................2316.00600060
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-........................................................................................................................................................................................................................................................................2216.00660000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................2116.00605001
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................1916.00605001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................2316.00600042
......................................................................................................................................ACTGAATTCTCGTGGGTCTGG..........................................................................................................................................................................................................................................................................2116.00660000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................2316.00600051
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................2215.00503002
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................1815.00530020
...............................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAG.................................................................................................................................................................2115.00500023
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................2315.00502030
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................2115.00500050
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................2014.00401030
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................2013.00300003
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GC.....................................................................................................................................................................................................................................2013.00320010
........................................................................................................................................TGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................1913.00303000
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GCTT...................................................................................................................................................................................................................................2213.00330000
.......................................................................................................................................CTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................1913.00303000
......................................................................................................................................ACTGAATTCTCGTGGGTCG............................................................................................................................................................................................................................................................................1913.00330000
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTCT.............................................................................................................................................................1913.00330000
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTT..............................................................................................................................................................1812.00202000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGC................................................................................................................................................................1812.00201010
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TA......................................................................................................................................................................................................................................................................2412.00220000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA...........................................................................................................................................................2412.00200020
...............................................................................................................................TTTTGGAACTGAATTCTCGTGGG...............................................................................................................................................................................................................................................................................2312.00200011
.............................................................................................................................................................................................................................................TTTTGTAGCACCATGAGATTCA..................................................................................................................................................................2212.00201010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTG.............................................................................................................................................................2212.00200002
...........................................................................................................................................................................................................................................AATTTTGTAGCACCATGAGATT....................................................................................................................................................................2212.00201001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAC.............................................................................................................................................................2212.00200011
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA............................................................................................................................................................2312.00200020
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TG......................................................................................................................................................................................................................................................................2412.00220000
.........................................................................................................................................GAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................1812.00202000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTG.....................................................................................................................................................................................................................................................................2512.00201010
......................................................................................................................................ACTGAATTCTCGTGGGTCTCA..........................................................................................................................................................................................................................................................................2112.00202000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG............................................................................................................................................................2312.00201010
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GCT....................................................................................................................................................................................................................................2112.00210001
.......................................................................................................................................CTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................1812.00202000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT................................................................................................................................................................1912.00200011
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCA..............................................................................................................................................................2111.00100010
..............................................................................................................................................................................................................................................TTTGTAGCACCATGAGATTCAG.................................................................................................................................................................2211.00110000
.....................................................................................................................................................................AACACTG--ACC-GCT---------GCTTTAAACCT-GG---G.....................................................................................................................................................................................................................2711.00101000
..............................................................................................................................................................TGA---CAACACTG--ACC-GCT---------G......................................................................................................................................................................................................................................1811.00100010
dp5
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT-------------T----CC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................21127503.002750307079516774936794922516325377
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2011718.0017180110126362191816914315
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2111491.001491114903820729412844112167
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................221707.007071930012821582582211115
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................201611.006110389214413722101617
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................221444.0044404541161761085017
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................191385.0038534158242212614214
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................211240.00240016546832635002
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221167.0016709193055442701
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................201161.001610662258851001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................221144.001440663432560001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................191124.001240518413551001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................201102.00102002576010000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................21160.00600177025110000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................21160.0060015021258225
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................18156.0056182211230000
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................20135.003503400000001
.......................................................................................................................................CTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................19133.003303300000000
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21123.002302300000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................23123.002304051130000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................19121.002101901100000
......................................................................................................................................ACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................19118.001801016010000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................21115.00150134430000
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................20113.00130710041000
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................19110.00100301130002
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................2219.0091302111000
.......................................................................................................................................CTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................1819.0090900000000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................2117.0070601000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................2216.0060500100000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................1816.0060000150000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................2315.0050410000000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................2015.0050310010000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................2314.0041111000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGA..........................................................................................................................................................................................................................................................................2114.0040100120000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................2014.0040100030000
........................................................................................................................................TGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................1914.0040400000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................2314.0040110010001
......................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-........................................................................................................................................................................................................................................................................2214.0040200020000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................2114.0040101200000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................2213.0030000030000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................2213.0030011100000
................................................................................................................................................................................................................................................TGTAGCACCATGAGATTCAGCTC..............................................................................................................................................................2313.0030003000000
..............................................................................................................................................................................................................................................TTTGTAGCACCATGAGATTCAGC................................................................................................................................................................2313.0030000001002
......................................................................................................................................ACTGAATTCTCGTGGGTCTGGT-A.......................................................................................................................................................................................................................................................................2313.0030000000030
........................................................................................................................................TGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................1813.0030300000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A.......................................................................................................................................................................................................................................................................2313.0030000000003
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTA..............................................................................................................................................................2013.0030300000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTA...........................................................................................................................................................................................................................................................................2013.0030200010000
.........................................................................................................................................GAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................1813.0030201000000
.....................................................................................................................................AACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2212.0020100000100
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCTT............................................................................................................................................................2212.0020200000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---C................................................................................................................................................................................................................................................................2712.0020110000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAA..............................................................................................................................................................2112.0020200000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA............................................................................................................................................................2312.0020200000000
......................................................................................................................................ACTGAATTCTCGTGGGTCA............................................................................................................................................................................................................................................................................1912.0020100010000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG...............................................................................................................................................................2012.0020000200000
......................................................................................................................................ACTGAATTCTCGTGGGTCTC...........................................................................................................................................................................................................................................................................2012.0020010010000
.................................................................................................................................................................................................................................................GTAGCACCATGAGATTCAGCTC..............................................................................................................................................................2212.0020200000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-........................................................................................................................................................................................................................................................................2212.0020001000010
.............................................................................................................................................................CTGA---CAACACTG--ACC-ATT-------------T----CC-...........................................................................................................................................................................................................................2112.0020101000000
..................................................................................................................................TGGAACTGAATTCTCGTGGGT..............................................................................................................................................................................................................................................................................2112.0020200000000
droPer2
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT-------------T----CC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................21121683.00216833097855667813854169
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2013420.003420118891031219388
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2111202.00120245697360591130
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................221634.006345652299209
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221398.0039801241122574
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................191359.00359201107323025
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................221353.0035304131202133
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................201331.0033117001109357
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................211181.00181012451285
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................191102.0010201348491
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................18190.009072015660
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................22179.007901520530
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................21153.005304421240
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................21147.004702015246
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................23130.00300109200
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................20130.00300151770
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................18126.00260012230
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-........................................................................................................................................................................................................................................................................22125.00252500000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................21121.00210011190
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG...............................................................................................................................................................20114.00140002120
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22111.0011001181
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................2018.008000170
.......................................................................................................................................CTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................1918.008080000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCT............................................................................................................................................................2317.007000160
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2017.007070000
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................1917.007010420
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................1916.006000330
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................2116.006000150
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................2015.005000131
......................................................................................................................................ACTGAATTCTCGTGGGTCTGA..........................................................................................................................................................................................................................................................................2115.005000131
......................................................................................................................................ACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................1914.004300010
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................1813.003100110
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................2313.003010020
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2113.003030000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC.............................................................................................................................................................2213.003000030
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................................................................................................................................2413.003000120
.........................................................................................................................................GAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................1913.003300000
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................1822.505000140
......................................................................................................................................ACTGAATTCTCGTGGGTCTTT..........................................................................................................................................................................................................................................................................2112.002000020
droAna3
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACCTGCTGCTGCTGCTGCTCT----CC-AGTTTGGCCAATTTTGTTAAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACCAAA----AAC-----ATCTCTCGC---------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................21126731.00267312241172499536099049275
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2012356.002356283981323821451271
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................2211993.0019933013036216281553
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2111103.001103487451017086305
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221905.0090542479610615437
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................221830.00830669352242278
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................181774.0077497502091462
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................211548.005481429721785088
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................201350.0035024720353531
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................191302.0030214121382892
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................211294.00294015017912106
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................191132.00132165816042
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................201125.0012501220102
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................20182.0082224611012
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................18280.50161800170136
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................22173.007334561405
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................20162.00629105641
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21159.00595900000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22156.005604120328
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................23151.005115117225
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................21142.004207121319
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................20140.00403900010
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................21133.003381021012
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................23130.00300300000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................22125.00250191005
......................................................................................................................................ACTGAATTCTCGTGGGTCA............................................................................................................................................................................................................................................................................19121.00211200405
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................................................................................................................................24120.00200113015
.......................................................................................................................................CTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................19119.00191900000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................18116.0016004507
.......................................................................................................................................CTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................18113.00131300000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA............................................................................................................................................................2319.009180000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG............................................................................................................................................................2319.009000405
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................2319.009050103
......................................................................................................................................ACTGAATTCTCGTGGGTA.............................................................................................................................................................................................................................................................................1819.009300402
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................1919.009220104
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................2218.008600200
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAA..............................................................................................................................................................2117.007061000
......................................................................................................................................ACTGAATTCTCGTGGGTCTA...........................................................................................................................................................................................................................................................................2017.007200005
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................1917.007310102
......................................................................................................................................ACTGAATTCTCGTGGGTCG............................................................................................................................................................................................................................................................................1916.006200112
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................2016.006410010
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................2116.006600000
........................................................................................................................................TGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2016.006600000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGG..........................................................................................................................................................................................................................................................................2115.005100112
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................2215.005030101
......................................................................................................................................ACTGAATTCTCGTGGGTCTGA..........................................................................................................................................................................................................................................................................2114.004100012
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA...........................................................................................................................................................2414.004040000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT......................................................................................................................................................................................................................................................................2414.004220000
......................................................................................................................................ACTGAATTCTCGTGGGTG.............................................................................................................................................................................................................................................................................1814.004000103
......................................................................................................................................ACTGAATTCTCGTGGGTCTTT..........................................................................................................................................................................................................................................................................2114.004100201
......................................................................................................................................ACTGAATTCTCGTGGGTTG............................................................................................................................................................................................................................................................................1933.6711000425
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-........................................................................................................................................................................................................................................................................2213.003100200
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCA.............................................................................................................................................................2113.003030000
...............................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAG.................................................................................................................................................................2113.003000201
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................1813.003000102
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTG.....................................................................................................................................................................................................................................................................2513.003300000
......................................................................................................................................ACTGAATTCTCGTGGGT..............................................................................................................................................................................................................................................................................1713.003000300
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---C................................................................................................................................................................................................................................................................2713.003210000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................2013.003120000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCGT............................................................................................................................................................2312.002010100
......................................................................................................................................ACTGAATTCTCGTGGGTCTCA..........................................................................................................................................................................................................................................................................2112.002100001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCGC............................................................................................................................................................2312.002000200
...............................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGC................................................................................................................................................................2212.002010100
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTG.............................................................................................................................................................2212.002000101
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................2312.002200000
droBip1
G-------TATAATATGTATGTATGTATATATATATCGACATATAACCCGACGCCTC---GTC-AGC-AA------TCGTCC--TC-GTG----------------------------TCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTCT----CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCTCGC---------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
A------------------TGTA------------TCGACATA--ACCCGACGCCTC---GTC-AGC-AAATTCGTTCGTCCTCTC-GTG----------------------------TCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCAACTG-CAACAACACTG--ACC-GCT-------------T----CC-GG--GGGCCAAT--TGTTCATATTTGAGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAAACATGCATCCACCAAAA--CAAC-----ATCTCT------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCT------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCTCGCTCTATCAGCTCTCTCTTCCTCTTCTATGTTTGTCCACGGCAA-------------AAAATAA-AATC---------------GA--------CAATAATTCAAAASizeHit CountTotal NormTotal
No Reads
droRho1
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCTCGCTCTAT----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAC-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC--------AAC-----ATCTCTCGCTCTGTCAGCTCTCTCT----CCTCAATGTTTGTCCACGGCA-----------------------ATC---------------GA------------------AATSizeHit CountTotal NormTotal
No Reads
droEug1
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGACAACAACACTG--ACC-GCT------------------CCCGG---GGCCAAT--TGTTAAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACC--------AA-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCAAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................2111195161.00119516100004891257825520113166114150154303408702684505222474042119113997961109971256116884511331941898223414653881325639148818562881312422846401428214995108641700000000000000000132613971136809181512410109422122371757194015690641300821296887389205241946057613162027513812560149377038218967082519447641212495308712101132156991449850449458010014161024391390518100820101092120913991097155282542715022309295816588614043149124171544897186410161235079296446301108126121647774176100915110659459622193021727453033769187379425044970911850900560312081082011002505164612004041491712491755270599737133943355711942454267378803372808472200025103034481025142919972529119584006379714098644628925392880319841631596906337511732698238212432104642032128564153608914016348456162949127539947812370787361394711816997477301523935093642591418182412143423158411812238578957952222502619001280866196173591317866813098543359673921377115510207481570138651514089131292184047635124871337319324401265293034811122605207413156825723829841660680180
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................201188622.0018862200007102131202380536002795359331940157361201423119610614711296110162394731093611968120178376492206661692151422813740000000000000000029030024117326431093752750533133484246816140273145441545802124226428564911093127109755810310203312842117284476550080000110576512619011614817615518913064147231348182011001079929633174013261782500158271840154391248143392212618523622042791381271823982232603100940159171000003677511120011968385975028252632241161322793321991061112126794115970000158178219821449831527174364129102994120054236556975615022276113381016769822184266846329441242267596318196571187848212567513142011412714538375811931129171634051250440255440827474657273974223076621880230174828715265910644158816582848376494027931748303512018102915206045981075688994196405317205264216639467102123840
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................22136358.00363580000295101881622420325471300135650391382323473776017221616168297022815202624558143140001082280000000000000000068836858436105741329714060112711133728918529301350871923716030187226693867159727613127762417511115165851145030000020416077522001269199841858435126714350484611172721212501053493512258090110421432527257037513341953148118720191819101072440011416220000010462572403023083533130170195420218714441135214372681000283699671745192101843248256168555122002733112314962148451501643342224397102362626742973566774349519212014258709499165412341639606117529120892339666171361068657548153623124635514513927112168227103438306123296422563640
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................21124323.0024323000025503422618226225008010150500691921353075081297992942184912171431383461318040060000000000000000019191917444421237411382861263380859415457431264952414245405388526124226921132403718130600110003093813150012077121918218684123412670432969903182949156145626102819375084107840392595211487967119258465231130162523127130263691111341021201092573111677299696353741128831218820343321900003021420456940563515950369162190642801323182783128801706723513717716352167103106725126161581781147119711743923416923737416337614814513147615969440739822251289208293623237915873331994239381227122026545224431455632763991022240
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................21120872.0020872000010043225281005002118202115000000019945612627959613242743165342600000000000000000000021423217015194023371111515972221612612107012329282194251395346697416682450104020104013111200000000000814141161135244617101421311000000234321195184531835020318214271184320022462625123333142100018012600000103100000016069604812321373421475142143141300091140000533777111123920201710611013237422433625710943954238101275239825424475117699572914676510490988692717919230595322125158265111110869525699201212742711801501240162206759331319621568207168648165954166351610451178460831150
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................22114076.0014076000010010001001005001820022000000000138249116232414713722141611141039000000000000000000000420104035514300410021000103021454634840101271790401190807600000000002319284531791181001716251100000190310042929022008241291400320020142493317130004129000007330000001614109268119817272981115350046780017701350192691892045831312753579499571084513773126148299337881191966351971471200114817314808954946531398971851531501906935352612702264014714362010405788012619331530802031863891282382794614791868313933125341661630
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................22112743.0012743000000134312000002008131200900000000121314107038671811412203034492180000000000000000000000014167203913397896056219121079010121811048751101413920210283192116510010101501020000000000613345522133514231171273483001000151203697701010110109412302131404330716000101000000818000000196988102810973773951113439379011086000035380131031361410213403831925193031275611333112381221649668954383089801139911115108710197331305688481278353865033011733361165550111029694462641701811245247454710538515172113113511952352760
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................22112180.0012180000010000000031008002540001800258330008511491112411413581111168709809340000000000000000027201816021274444010106278120010164113693129102142427119521441111069540263431900000010000215393744790191012600000410131162859420391030372590771800050411105713682002041000000411000000131510364787422068745440334591008300003501887956222249288313423185784968974920062276120231194420242671362979576848995478594553628527517312170928097134221734132341003552123310412263128525026329866271264194971814114784301015972288991652350
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................2118348.00834800001147711413010100376400190000000361116313524316081927281126101000000000000000000003224212011627259342133205307663002310129738596111322925170700301060413600000000008183515232110181411212212300000240031065030039050121810271402117361311000916000000936000000106614189554711556121700900001010023711730322624619236952420517119278613736443323101821228162882151131765451253646172121816186347101767127437287594372417455114507151302581437261113481761023114224140
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................1914980.004980000000000000000003005413001303532008257341893421742492000100000000000000000003529352011055081600211150200311021214632140010320640200010090200611000100454463450604520900000291042401817031043533863801119651121010800060100000012000000171713162512210121318139719175162911610000405122719262377322475417213356419726243187252044049102377828201131386914012871269421121313212123583123022336164171272145307165181320134101113490384313452910761336800
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................1813407.00340700000000000000010000000400010000000000001100000022000000200000000000000000002115500000030039033204000241022300000000041623091000000200061000000000000001110000000000000000334505031012510363400030060035000000401000200000000001022121045012070111000111974903101141416102151201423255312610156182911820000000023939294289438343516344023460000563395726431260200104120602191363614426056100
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................2012875.002875000020000000001300000002150184691104248011310022103131111100090500000000000000000431762021131300350324130042580231834481180110271900000000003000000000000206920032510014013037015100027306022532001276152610811503801501154500002300002010100001611111618215756579924111410000252041255208315411440151824102233181713104451401016133161435721163137134831621637135413131311111218249202125536191536089714913111110924195190
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................2011967.0019670000000000000000000001100080111612210011112123020311611000110000000000000000009633000510410000020000011007814020000010017010041101142000020010000143211230423200000411910011220103011141161181201020302303011001000000000000000026551012831510811164004000061203154280024462547913743711011571013316124025535153231612113395315221411501301042144314005512320181251121746141100000131221426250
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................2111275.001275000010001100000000000010000000000000101200520001512000000000000000000000000002211001001100100100000003018652210101001001000100000000000000000000001101100000000300160330000350306160010003030000000100000001000000100023210011110300000001121256491062624044332602311512111675331191269319273151207510434119452600127179211900136452701412210110300001001110
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................1811088.00108800000000000000000000150010001022100210000000120331011000000000000000000000007108820001031000200200000070810137120100220010100000011000000000010007010122101310000011515600040100020211001056411132640000002000000200000014161044105002100023010700003420203260020111276731922349912692014271619832111109320240947647386220210111131801133774610000210330010001013333020
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................1911066.0010660000000000000000001000010000000000000000000000100010100000000000000000000000000107110388333081930212442006213123386953851613346010000000000000000000000000000001101220000001001115010100011000020000100020100010000000001000000640100010312100000000003101111050020412021230112503317232332141224842330274051321270010114451300228053201000032300001010067000
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................1911019.001019000000000000000000000000030740000000000000010000000000001010000000000000000010201000000310140118032000151157101720002006100000000000001400000001006001000200000110800200271310131770427041253038100100111000000000000000000003014316540133427233000000111201006111240101614644253213220400000333106242237471001320000452594323132430102305076920220241611230
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCATC...........................................................................................................................................................241753.007530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562191000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG...............................................................................................................................................................201490.0049000000000000011000000000000100000000000000010000000100100000000000000000000000000000100010000000000000004124100010000000000000000100000000000000011000011200000001010010201000000091440114400000000000000000011000000101000000010000200000000100120010011052323010303236133112053769781543192223312310300000202332180001000300001052100000000102000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................231424.00424000000000000000000000100003000000000000000400110120000000000000000000000000001010000401200000001000000001420001100002000020000031000000000000200000010021000000110000534000000050302000020022000000000000000000000000006001002220360070000000020214230073120014005004113161241247321024190130935181000100200010001800260611315550030010038314130
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................191400.0040000000000000000000000100000600000000000000000000100010000010000000000000000000012000000120000110000000004350010000000110000210000000000000000000002000001100000020173801203001302010100101800000000010000000000000000554300001450001000000000102012630060212020230080517750321063210234222106000400100000301316000009111341201603200100000626220
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA............................................................................................................................................................231370.0037000000001000000000000000000100000000003001420110012230000000000000000000000000001020023100000000000000500141100000000000000000000000000100000215300101016500000000000000000000000000000000000000000100000001700000000010002641522300020000010000000000011110000000100000110034474723353100100100213000101939000007468000010011100100702012020
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................221347.00347000000000000000000000100000000000000000000000000000100000000000000000000000001000000000110000000000010000201000000002001000200000000000000000000030010000000000000100330000330201060010006001000000000000001000000060000041051131300200000000800010501000122100200100014020319212114012210142212102220100023210111062353131126853002600134022110
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................181334.00334000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000002402000000000000000000000000000000000000000000000540421032011050201002000010000000000000000000000000010001100030230000000062010010270321010021312321420000000000054012202818360010000000223425011010000010040190000062118000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................201311.0031100000000000001000000000000000000000010100200000000001100000000000000000000000000000000100000000000000001240000000000000000000000000010000000000002000112000000020013001000000100100200030002010000000000000000000020021000010000030010000020102011001011110042000011531305122421441808015125324000101041741900274038182144536001000103114230
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................211305.00305000020000000000000000000000000000000000001100100120000000000000000000000000000100000000400011004100000612141011000003001000000000000000000000000030000120200000000002002620011003001200010000021200000100000000000000010000200002101001000000000021110100124010101011303120221000002100320413342000010011461011024010121321150216000202012100
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................231284.002840000101000000000000000000100000000000000002010000000000000000000000000000000130400000035000002812001016079123451000000010000000000000000000000000000001000000010005000000802000120004030500000000000200000000000000000000102165496440040200000000100000000000000100002000001020000000003113412100010012010200100000300004300001200002949040
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................201272.0027200000000010000100000000000000000000100000100000100200020000000000000000000001100000000102000000000000001583010000000000000010000000000000000000000000000010000050010001000000000100010020010000000010000000000000000000000000000050010000000011100013013012081010761503607115141130407331010120000301143081003412241030125071000000023130100
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................231246.002460000000000000000000001000000000000000010000100000000000000000000000000000000100000000000000100200000000001100000000000010000010000000000000032000100100000000000000000101000000000200000000000000002000000020000002000000311124301000000000001000100001100202011000101100001294352501121000142050000002616010021224203100000000300101102010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGA..............................................................................................................................................................211232.002320000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000001010000001000000000000100010100001010001000000000000000000000000000000000000000000001000200000206360002200102021280001213183122939671333920101000002001022100000000000000000000000000000
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................181229.00229000000000000000000000000001000000002110110000000300110000000000000000000000020200000201000000000000000000220000000000000000001000000000000001000001110000200000150270030002000401000000252023200000000000000000000001520110000000001010000010000010000000000004000000010001008370303000500911264300100100010015033002003021500000000100000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCT............................................................................................................................................................231228.002280000000000000000000001000000000000000010000000000010000000000000000000000000010000020020000200000000000013440000001000000000000000000000000002000000010000000000000010010000020000000000100000000000000000000000000000110010221000100000000000100120010200110020110006211010112123118010112060100100000100403003241102041000241000000001812320
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................231226.00226000000000000000000000000000000000000000002000000010000000000000000000000000001000600150000000100000000023422000301000000000000000000000000001400202000000000000000000010000010000100000000040000000000000003000000000000001613423000000000001000020000000000000000110000011448619432261000000011000032212000000342000000010000000000000020
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT......................................................................................................................................................................................................................................................................241193.0019300000000000000000000110000000000000010000100011000000000202000000000000000000000030302000000000000000000000100000000000000000000001200011020240305100000000000000000000000000000000000000001020000000100030100000000050021712402126353001000000000000000000000000000000000000000000000000000000000000000400010000300000000000000000001000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................221173.0017300000000000001000000000000000000000001000020011001000000000000000000000000000010330640376015004110033703821315000000000000000000000000000000001100100000000000001010002100000000000300010000000000000000000000000000000000031111301010000000000050010000000000170010002004011000102000010000112000000000000040000200000000100000000320000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-........................................................................................................................................................................................................................................................................221167.001670000000000000000000000000000000000000010029000000210100000000000000000000000000010007011000102300000100152041000100040000000000200000000000000000000010000000000000011101200000001000100000000000000000000000000000001000201000010000000010010621200002115204021001100020010000021311101000010001010301600218001000001001000000000017010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................221166.00166000000000010000000000000000000000000000000000000000000000000000000000000000011100000001000010010000000001202100000000000000000020000000000000000000000000000000900000020000000110000000000101100000100000030000000020000000010000000100000000210010100110001010011005003011191193130710100101000000011071100112224122003104000100000110010
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................231157.0015700000000000000000100000000000000000001001100000000000000361400000000000000000220002060124000001100000000434131100000000000000000000010110500001100010000010700000000000100010001000200000000000000000000000100000000000000031103660001012000000000000000100000000000000000000000000000000010101000001210000011110000001000000000100100010
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A.......................................................................................................................................................................................................................................................................231149.0014900000010000000000000000000000000000000000100000000000000000000000000000000002212040423030012003100001218711111121000000000000000000000000010000107000001000200001000006020201000000000020000000000000000000000000000000000042114222000010000100000000000000000200000000020000000100030000000100000000200000050301100000000000100010200000
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................211148.001480000000000000000000000000000000000000000000000000001000000000000000000000000000001012404112031044010023180643193913123100000000000000000000000000000000000000000000000000000210000000000030000000000000000000000000000000000011001011000000001100000000000000000000000000000001010000001000000000000100000000040000000000000000000000000010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................221147.00147000000000000000000002000000000000010000000100000000000100000000000000000000010000430140000000000000000052605000000200000000000001000000000010000101000000000000000000000000000000000000000010000000000000002000000000010000000000000100001000100000011100000100000002000000324114119110000111001100010500000130055000000010000100000000010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA............................................................................................................................................................231146.00146000000000000000000000010000000000000010000000000010000000000000000000000000000000300010000000000000000001000000000000000000000000000000000000200222000100000000000000000000000000000000000010000010000000025000000000000001011710000000000000000000000000000000000000000000228523230121000000000000032301000000104000000000000000100000000
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCT...............................................................................................................................................................181122.0012200000000000000000000000000000000000000000000000000000000000000000000000000000000100000510020110000000006122650200102000000000000000000000000000000000000000000000000000000100000000000000300000000000000000000000000100010000000000000000000000000000000100000010000112110120091503030100100000000000200000003120010101100300000000011000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGA..........................................................................................................................................................................................................................................................................211107.00107000010000000010000000020000000000000000000100000010000000000000000000000000000000000011300000010100003012350200000000000000000000010000000000000000000000000110000000311000001100210000100000000000000000000000000000001000000000000000000000000000000010021000100000100011000000000021005101000000000000301140000000000000100100300210010
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................201102.001020000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000100010000000000000000000001000000000001410141003000300010000000000000000000000000000000010000000110000000000002000100000010000101000000000010000000000100132440000000000000140000100001000000601010010010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT................................................................................................................................................................19199.009900000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000020000010000000000000400010030200001020000000000000010300000000000100010000000000011020011000030010002102011100000100030040001000020000112000200131010210012010000013012100
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TC......................................................................................................................................................................................................................................................................24196.009600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001006330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---.................................................................................................................................................................................................................................................................26185.0085000000001000000000000000000000000000000000100000010000000000000000000000000000010000010000000000000000000000000000000000000000000200031200001170100000000000000000000000000000000001000000000000000000000000000000000000070110111161000000000000000000000000000000000000000000000000000000000004000001201000010100000000000000001110010000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA...........................................................................................................................................................24181.0081000000100000000000000100000000000000000102000000000000000000000000000000000001000300000000000000000000010102000001000000000000000000000000010000002000000000000000000000000000000000000000010000000000000000000000000000000003102200000000000000000000000000000000000000000121203119010000000001000000300000000201000000000000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................21180.008000000000000000000000000000000000000000000010000010000000000000000000000000001010000000010000010000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000011000000010000000001022000000000000201200001004016070040200000000001201120000000002001001100000000001010
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-........................................................................................................................................................................................................................................................................22176.0076000000000000000010000000000000000000000000100000200000000000000000000000000000001502101300110230000110024271400000000000000000000000000000000000010000000000000000001000020001000000020000000000000000000000000001000000001001010002000000000000000000000000000010000021000000001000000010001100010000000011010200001000100000000000100
......................................................................................................................................ACTGAATTCTCGTGGGTCA............................................................................................................................................................................................................................................................................19174.007400000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001002000000000000000000000000000000000000000000000000000000000000000000000014001000100140000000000000000000000000000000000000000000100000100000000010000010000000010000000000000000000000000008410100000010000000130000000002000001721102000000
..................................................................................................................................TGGAACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................23174.0074000000000000000000000000000000000000000000000000010000000000000000000000000002000003001200000010000001002101100000000000000100001000000000000000000000000000000000000000000200000000000000000000000000000000000000000000161003301400300000100010010020000001100000001000101001104000000001100101000000000009000000000200100000000000000
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................20172.0072000000000000000010000000000000000000000001000000000000000000000000000000000000000000000100000040300000033761100004200000000000000010200000101000000000000000100000100100230013000000000000000020000000000000000000200000100000000000000000000000000000000000000000000000000000010000000000010000100000000070020000000001000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAT............................................................................................................................................................23171.00710000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000011000000000000000000000000100000001010000000020000000000000000000000000000000000110110000173000000000000000100010000000000012000130806100020000210000000101000000000000000000000200000011110
droSim2
A------------TATGTATATA------------TCGACATAAAACCCGCCGCCTC---GTC-AGC-AA------TCGTCC--TC-GTG----------------------------TCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................22133537.0033537122151635452310034105288153215263488272383110626931
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................21124155.00241552231413637163840211118071160826126413876155165001
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................2016938.0069381071611333119181424262801566383000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2016333.00633315002294113651244112268915142511645000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2115558.00555812471101911945212235125697610206352031623000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................2313316.0033161021283000001603032880001
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................1912250.0022501471902101224159251131298000
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................1811528.0015281002751751032702048413007000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................1911415.0014154001182858313020162601102000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................2111056.001056221000010902071014000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-........................................................................................................................................................................................................................................................................221869.0086949411525100001000017000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................211831.0083100420043282792501892736000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................221597.0059723118400000122147291000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221577.0057710210010379122568811456000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................231465.0046545412084297010000715000
......................................................................................................................................................................................................................................................ACCATGAGATTCAGCTC..............................................................................................................................................................171399.003990000000001398000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................181370.0037000003921510612978100000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................211329.00329201200169244116117947000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A.......................................................................................................................................................................................................................................................................231297.002971022000214104057205000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................221247.00247600252024295838781220000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-........................................................................................................................................................................................................................................................................221227.002270000000000001226000
......................................................................................................................................ACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................191200.0020018512300000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................221111.001111001001491410451700000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TA......................................................................................................................................................................................................................................................................241107.0010713410000010001078000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGA..........................................................................................................................................................................................................................................................................21192.00921300000000010276000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-T.......................................................................................................................................................................................................................................................................23175.00751410000000000159000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................23171.007100020044143313100000
......................................................................................................................................ACTGAATTCTCGTGGGTCG............................................................................................................................................................................................................................................................................19170.0070646000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................23159.00590001002322229000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................20157.0057410000000000052000
......................................................................................................................................ACTGAATTCTCGTGGGTCTTT..........................................................................................................................................................................................................................................................................21156.0056100000000000055000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGG..........................................................................................................................................................................................................................................................................21150.0050374800000000001000
......................................................................................................................................ACTGAATTCTCGTGGGT..............................................................................................................................................................................................................................................................................17150.0050000000840335000000
......................................................................................................................................................................................................................................................ACCATGAGATTCAGCT...............................................................................................................................................................16146.0046000000000046000000
.......................................................................................................................................................................................................................................................CCATGAGATTCAGCTC..............................................................................................................................................................16146.0046000000000046000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA............................................................................................................................................................23145.00450001002121173000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA...........................................................................................................................................................24139.00390000001117144011000
..................................................................................................................................TGGAACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................23137.00370000001361320120000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................20135.0035000204020124200000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-........................................................................................................................................................................................................................................................................22135.0035291200000020010000
......................................................................................................................................ACTGAATTCTCGTGGG...............................................................................................................................................................................................................................................................................16134.00340000001242211003000
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................18133.0033617000000019000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTC...................................................................................................................................................................16132.0032000000000032000000
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................18132.0032282000000002000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTTTT-........................................................................................................................................................................................................................................................................22131.0031000000000000031000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT......................................................................................................................................................................................................................................................................24127.002720310356410011000
..................................................................................................................................................................................................................................................TAGCACCATGAGATT....................................................................................................................................................................15126.0026000000001025000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................22125.002500000020597011000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-T.......................................................................................................................................................................................................................................................................23125.0025000000000000025000
.........................................................................................................................................GAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................19124.0024115100000007000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................20124.002400000007952001000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCA..................................................................................................................................................................17121.0021000000012018000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAAA..........................................................................................................................................................25121.0021000000221070000000
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21121.002161490000001000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................21119.001900000031318300000
......................................................................................................................................ACTGAATTCTCGTGG................................................................................................................................................................................................................................................................................15118.0018000000110016000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA............................................................................................................................................................23118.001800000001861110000
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................19117.0017000100000210400000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---C................................................................................................................................................................................................................................................................27116.001600000077200000000
........................................................................................................................................................................................................................................................CATGAGATTCAGCTC..............................................................................................................................................................15116.0016000000000016000000
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGC...................................................................................................................................................................................................................25114.001440100017100000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---.................................................................................................................................................................................................................................................................26114.001400320033201000000
...........................................................................................................................................ATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................17113.0013000000000013000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-A.......................................................................................................................................................................................................................................................................23112.001261000000000032000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22111.001100000022007000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTA...........................................................................................................................................................................................................................................................................20111.001121010000001006000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-AA......................................................................................................................................................................................................................................................................24111.001100000000221024000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................20110.001040000000006000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAA...........................................................................................................................................................2419.00900000041310000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAA..............................................................................................................................................................2119.00900000010421010000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................1918.00800011000006000000
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCA.................................................................................................................................................................................................................2718.00820000023010000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTTA..........................................................................................................................................................................................................................................................................2118.00800000000000008000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TC......................................................................................................................................................................................................................................................................2417.00720000000000005000
..................................................................................................................................TGGAACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................2217.00700000011220010000
......................................................................................................................................ACTGAATTCTCGTGGGTTC............................................................................................................................................................................................................................................................................1917.00770000000000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................2317.00700010000001005000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-G.......................................................................................................................................................................................................................................................................2316.00632000000000001000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG...............................................................................................................................................................2016.00600000000005100000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCAA...........................................................................................................................................................2416.00600000000510000000
..........................................................................................................................................AATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................1816.00650100000000000000
......................................................................................................................................................................................................................................................ACCATGAGATTCAGCTA..............................................................................................................................................................1716.00600000000006000000
......................................................................................................................................................................................................................................................ACCATGAGATTCAGCTT..............................................................................................................................................................1716.00600000000006000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-AAA.....................................................................................................................................................................................................................................................................2515.00510000000310000000
.........................................................................................................................................GAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................1815.00500000100013000000
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---GG....................................................................................................................................................................................................................2415.00500000021101000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................................................................................................................................2415.00500000030001001000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGTC-........................................................................................................................................................................................................................................................................2215.00500000000000005000
..................................................................................................................................TGGAACTGAATTCTCGTGGGT..............................................................................................................................................................................................................................................................................2115.00500000021200000000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................2115.00500000000004100000
...........................................................................................................................................ATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................1615.00500000000005000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTAT..........................................................................................................................................................................................................................................................................2115.00510000000000004000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGAT-........................................................................................................................................................................................................................................................................2215.00500000000000005000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGC................................................................................................................................................................1815.00500000400001000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---CAA..............................................................................................................................................................................................................................................................2915.00500000013100000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................2215.00500000011120000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGA..............................................................................................................................................................2114.00400000000101200000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TG......................................................................................................................................................................................................................................................................2414.00420000000000002000
...........................................................................................................................................................................................................................................AATTCTGTAGCACCATGAGATT....................................................................................................................................................................2214.00400100010110000000
......................................................................................................................................................................................................................................................ACCATGAGATTCAGCTCT.............................................................................................................................................................1814.00400000000004000000
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2014.00410030000000000000
..................................................................................................................................................................................................................................TGAAATTGAAATTCTGTAGCACCATG.........................................................................................................................................................................2614.00400000011020000000
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--.............................................................................................................................................................................................................2913.00300000021000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTG.....................................................................................................................................................................................................................................................................2513.00300100010100000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTTAT-........................................................................................................................................................................................................................................................................2213.00300000000000003000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TAA.....................................................................................................................................................................................................................................................................2513.00300000000000012000
.......................................................................................................................................................................................................................................................CCATGAGATTCAGCT...............................................................................................................................................................1513.00300000000003000000
......................................................................................................................................................................................................................................................ACCATGAGATTCAGCTCA.............................................................................................................................................................1813.00300000011001000000
......................................................................................................................................ACTGAATTCTCGTGGGTCGA...........................................................................................................................................................................................................................................................................2013.00330000000000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGAC-........................................................................................................................................................................................................................................................................2213.00301100000000001000
.........................................................................................................................................GAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................1713.00300000000003000000
droSec2
A------------TATGTATATA------------TCGACATAAAACCCGCCGCCTC---GTC-AGC-AA------TCGTCC--TC-GTG----------------------------TCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................21124777.002477727914601175611282
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2012648.002648302806701668
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2211440.001440501161225553
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................2211123.0011231430131948
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2111012.001012146201101564
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221426.00426014152260
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................201234.0023450432139
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................211214.00214104011252
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................181183.00183102180
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................221108.00108166932
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................19192.009253282
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................21182.0082254233
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................19174.0074221654
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................23156.0056137432
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................20144.004430185
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21143.004342010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................18142.0042021426
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................18140.004000040
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................21139.003909030
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................23132.003200329
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................20117.001710016
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22117.001700017
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................22116.00165218
......................................................................................................................................ACTGAATTCTCGTGGGTCTGA..........................................................................................................................................................................................................................................................................21116.00164606
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................20112.001212000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A.......................................................................................................................................................................................................................................................................23110.00103007
.......................................................................................................................................CTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................1919.0099000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................2318.0080233
......................................................................................................................................ACTGAATTCTCGTGGGTCA............................................................................................................................................................................................................................................................................1918.0084004
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................1917.0070061
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................2317.0075011
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA............................................................................................................................................................2316.0060060
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................................................................................................................................2415.0050005
........................................................................................................................................TGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2015.0053020
......................................................................................................................................ACTGAATTCTCGTGGGTA.............................................................................................................................................................................................................................................................................1815.0051004
....................................................................................TC-GTG----------------------------TCAAATTCATTTTGGA...............................................................................................................................................................................................................................................................................................2114.0041021
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................2114.0041021
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................2114.0041003
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGA................................................................................................................................................................1914.0040112
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................1814.0040031
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................2214.0041300
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................2213.0030030
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCT............................................................................................................................................................2313.0030120
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTC............................................................................................................................................................2313.0030003
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................2213.0033000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................2013.0030003
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAT............................................................................................................................................................2313.0031002
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................1913.0031011
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-T.......................................................................................................................................................................................................................................................................2312.0020101
......................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-T.......................................................................................................................................................................................................................................................................2312.0021100
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTCT...........................................................................................................................................................2412.0020002
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................2012.0020002
......................................................................................................................................ACTGAATTCTCGTGGGTCTGG..........................................................................................................................................................................................................................................................................2112.0021001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT................................................................................................................................................................1912.0020011
.......................................................................................GTG----------------------------TCAAATTCATTTTGGA...............................................................................................................................................................................................................................................................................................1912.0020020
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................2012.0022000
......................................................................................................................................ACTGAATTCTCGTGGGTTC............................................................................................................................................................................................................................................................................1912.0020002
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................2312.0021010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTACA............................................................................................................................................................2311.0010001
.......................................................................................................................................................................................................................................................................TGGCGTGAATTTCAA-ACATG.........................................................................................................................................2011.0010010
......................................................................................................................................ACTGAATTCTCGTGGGTCG............................................................................................................................................................................................................................................................................1911.0010001
.............................................................................................................................................................................................................................................TTCTGTAGCACCATGAGATTCT..................................................................................................................................................................2211.0011000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTTT..........................................................................................................................................................2511.0010001
........................................................................................................................................TGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................1911.0010010
........................................................................................................................................TGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................1811.0011000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGAT-........................................................................................................................................................................................................................................................................2211.0010001
.............................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---......................................................................................................................................................................................................................2211.0010001
......................................................................................................................................ACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................1911.0010001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................2111.0010010
......................................................................................................................................ACTGAATTCTCGTGGGTGA............................................................................................................................................................................................................................................................................1911.0010001
.....................................................................................................................................................................................................................T--TGTTCAT-TTTGAAATTGAAATTCTG...................................................................................................................................................................................2611.0010001
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG............................................................................................................................................................2311.0010001
droYak3
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................21151911.00519115284337031332032326598800001322
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2214767.0047673226625787341349330000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................2112342.002342185191693621116100112
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2012152.00215241056441633806771770020
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................1811326.0013269421114010825100000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................2211231.001231488491203135277330000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................211949.009491731402943064184640000
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................191766.007666632161294410010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221475.004750181127270163400000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................221310.003100325615112320000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................201221.00221010111402400000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................201197.001970019500200000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................191168.00168031283121910020
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................201151.00151116221634330020
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-........................................................................................................................................................................................................................................................................221140.001401371100100000
......................................................................................................................................ACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................191126.001261191101400000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................211113.001130104914112530001
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................18150.00501030063100000
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21150.0050149000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................23133.0033045341610000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................21129.0029002023400000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................22127.0027192401100000
......................................................................................................................................ACTGAATTCTCGTGGGTCA............................................................................................................................................................................................................................................................................19125.0025129000400000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................23125.0025182100130000
......................................................................................................................................ACTGAATTCTCGTGGGTCG............................................................................................................................................................................................................................................................................19124.0024230001000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................23116.001663700000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22116.001602005900000
..................................................................................................................................TGGAACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................23114.0014001110200000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................18113.001300040810000
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................20111.001111103410000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................20111.001105600000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-........................................................................................................................................................................................................................................................................22111.001130401300000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................22110.001004201030000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................2319.00902012310000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGG..........................................................................................................................................................................................................................................................................2118.00830012200000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................2118.00807100000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC.............................................................................................................................................................2218.00801600100000
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2018.00808000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................2118.00802002310000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................2317.00702500000000
.....................................................................................................................................................................................................................................AATTGAAATTCTGTAGCACCATGAGA......................................................................................................................................................................2617.00700000000007
......................................................................................................................................ACTGAATTCTCGTGGGTA.............................................................................................................................................................................................................................................................................1817.00710004200000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................................................................................................................................2017.00700410200000
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................1917.00706100000000
.......................................................................................................................................CTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................1916.00606000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---C................................................................................................................................................................................................................................................................2716.00603200010000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT......................................................................................................................................................................................................................................................................2416.00604200000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................2116.00600321000000
......................................................................................................................................ACTGAATTCTCGTGGGTTA............................................................................................................................................................................................................................................................................1915.00511000210000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---.................................................................................................................................................................................................................................................................2615.00503200000000
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................1815.00500301010000
......................................................................................................................................ACTGAATTCTCGTGGGT..............................................................................................................................................................................................................................................................................1714.00400000400000
..................................................................................................................................TGGAACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................2314.00400400000000
.........................................................................................................................................GAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................1914.00440000000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-A.......................................................................................................................................................................................................................................................................2314.00440000000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG...............................................................................................................................................................2014.00400010300000
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................1914.00401101100000
......................................................................................................................................ACTGAATTCTCGTGGGTTC............................................................................................................................................................................................................................................................................1913.00310000200000
droEre2
------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................................................................................................................................21129289.00292894294518225916521965184642
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................................................................................................................................2013562.003562346626210236027380
......................................................................................................................................ACTGAATTCTCGTGGGTC.............................................................................................................................................................................................................................................................................1811892.0018926243206317310
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................................................................................................................................2211355.001355282587554511150
......................................................................................................................................ACTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................2111080.00108013678362605880
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................2211032.0010324324032131723430
......................................................................................................................................ACTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................201798.0079823013912183090
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................................................................................................................................221705.007056156130365570
......................................................................................................................................ACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................191590.005905111501234000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................................................................................................................................211514.005144111035351081850
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................................................................................................................................191246.0024611118182070
......................................................................................................................................ACTGAATTCTCGTGGGTT.............................................................................................................................................................................................................................................................................181211.00211202042030
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................................................................................................................................221173.0017337112326490
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................................................................................................................................211160.00160342351430
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................................................................................................................................20177.00772718142187
......................................................................................................................................ACTGAATTCTCGTGGGTCTT...........................................................................................................................................................................................................................................................................20171.0071402011540
......................................................................................................................................ACTGAATTCTCGTGGGTCA............................................................................................................................................................................................................................................................................19165.00651202032190
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................................................................................................................................22155.005510613440
.......................................................................................................................................CTGAATTCTCGTGGGTCTGCA-........................................................................................................................................................................................................................................................................21147.004747000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................................................................................................................................18139.003900311340
......................................................................................................................................ACTGAATTCTCGTGGGTA.............................................................................................................................................................................................................................................................................18137.003730003310
......................................................................................................................................ACTGAATTCTCGTGGGTCTGT..........................................................................................................................................................................................................................................................................21135.0035105011180
......................................................................................................................................ACTGAATTCTCGTGGGTCG............................................................................................................................................................................................................................................................................19130.003010101270
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T.......................................................................................................................................................................................................................................................................23124.002480004120
.......................................................................................................................................CTGAATTCTCGTGGGTCTG...........................................................................................................................................................................................................................................................................19124.002423000010
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................................................................................................................................20123.002301701050
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................................................................................................................................23119.001900102160
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................................................................................................................................21115.00152123160
.......................................................................................................................................CTGAATTCTCGTGGGTCTGC..........................................................................................................................................................................................................................................................................20114.001414000000
......................................................................................................................................ACTGAATTCTCGTGGGTCC............................................................................................................................................................................................................................................................................19111.00111020080
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT......................................................................................................................................................................................................................................................................24111.001111000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-........................................................................................................................................................................................................................................................................2219.0091010430
.....................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................................................................................................................................1819.0091001160
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................................................................................................................................2219.0091000080
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT...............................................................................................................................................................1918.0081120130
......................................................................................................................................ACTGAATTCTCGTGGGTTA............................................................................................................................................................................................................................................................................1918.0080000620
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................................................................................................................................2218.0080020330
....................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................................................................................................................................1918.0081001060
......................................................................................................................................ACTGAATTCTCGTGGGTCTA...........................................................................................................................................................................................................................................................................2016.0061010130
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT..............................................................................................................................................................2016.0062200020
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT.............................................................................................................................................................2115.0052000030
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A.......................................................................................................................................................................................................................................................................2315.0051010111
..................................................................................................................................TGGAACTGAATTCTCGTGGGTCT............................................................................................................................................................................................................................................................................2315.0050200120
......................................................................................................................................ACTGAATTCTCGTGGGTTG............................................................................................................................................................................................................................................................................1925.00102010070
......................................................................................................................................ACTGAATTCTCGTGGGTAA............................................................................................................................................................................................................................................................................1924.5094000500
......................................................................................................................................ACTGAATTCTCGTGGGTCTGA..........................................................................................................................................................................................................................................................................2114.0040000040
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT................................................................................................................................................................1914.0040000130
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C.......................................................................................................................................................................................................................................................................2314.0042000011
...................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCA.............................................................................................................................................................2114.0040011020
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA............................................................................................................................................................2314.0044000000
......................................................................................................................................ACTGAATTCTCGTGGGTCTTT..........................................................................................................................................................................................................................................................................2114.0042000020
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG............................................................................................................................................................2313.0030000030
......................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTG.....................................................................................................................................................................................................................................................................2513.0033000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................................................................................................................................2313.0030010110
.............................................................................................................................................................................................................................................TTCTGTAGCACCATGAGATTCAGCT...............................................................................................................................................................2513.0030000003
......................................................................................................................................ACTGAATTCTCGTGGGTCTGG..........................................................................................................................................................................................................................................................................2113.0033000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT..............................................................................................................................................................2112.0020000020
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA...........................................................................................................................................................2412.0022000000
..................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTG.............................................................................................................................................................2212.0020000020

Generated: 10/20/2015 at 06:59 PM