ID:

dmo_333

 Coordinate:

scaffold_6482:291890-291940 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.9 -21.6

Flybase annnotation

intron [Dmoj\GI14384-in]

Repeatable elements

NameClassFamilyStrand
G_DMLINEJockey+
mature
  1. dmo_333  scaffold_6482:291891-291914 -
  2. scaffold_6482:509421-509444 -
  3. scaffold_6482:1835704-1835727 -
star

Sense Strand Reads

AAATATTTCACGCATTTACTAATAGGTATGAGTTCTCTACCTAGCGAGACTTGTGGGCATGCACCTCTTCTCATAGTGAATGTTGTGTGTGCTGATTTGCTGGTGTTGATTGTTATACACAATTTGTTCAGCCAAGGGCACAGAAAGTCCA
***********************************((.(((((((((.....((.(((((((((...(((.......)))....))))))))).))))))))).)).)).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
 V056
head
............................................................................TGAATGTTGTGTGTGCTGATTTGC................................................... 24 0 3 276.67 830 359 102 180 187 1 1
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGG................................................ 27 0 3 104.00 312 247 19 42 4 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTG.................................................... 23 0 3 85.33 256 225 3 18 10 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCT.................................................. 25 0 3 58.00 174 84 45 35 10 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTG................................................. 26 0 3 24.33 73 66 1 5 1 0 0
............................................................................TTAATGTTGTGTGTGCTGATTTGC................................................... 24 1 3 15.67 47 1 46 0 0 0 0
.............................................................................GAATGTTGTGTGTGCTGATTTGC................................................... 23 0 3 10.67 32 32 0 0 0 0 0
......................TAGGTATGAGTTCTCTACCTAGCGAGAC..................................................................................................... 28 0 1 9.00 9 4 5 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTT..................................................... 22 0 3 7.00 21 18 2 1 0 0 0
......................TAGGTATGAGTTCTCTACCTAGCGAGACT.................................................................................................... 29 0 1 6.00 6 1 5 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCC.................................................. 25 1 3 5.67 17 1 11 5 0 0 0
.............................................................................GAATGTTGTGTGTGCTGATTTG.................................................... 22 0 3 5.67 17 16 1 0 0 0 0
.............................................................................GAATGTTGTGTGTGCTGATTTGCTGG................................................ 26 0 3 5.33 16 15 1 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGGT............................................... 28 0 3 4.33 13 6 5 2 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTTC................................................... 24 1 3 4.33 13 0 0 0 13 0 0
............................................................................TTAATGTTGTGTGTGCTGATTTGCT.................................................. 25 1 3 4.00 12 0 11 1 0 0 0
.....................................TACCTAGCGAGACTTGTGGGCATGCAC....................................................................................... 27 0 1 4.00 4 2 2 0 0 0 0
.................................TCTCTACCTAGCGAGACTTGTGGGCA............................................................................................ 26 0 1 4.00 4 4 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTC................................................. 26 1 3 3.33 10 7 0 3 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATT...................................................... 21 0 3 3.00 9 6 1 1 1 0 0
.........................................................................................................TTGATTGTTATACACAATTTGTTCAGCC.................. 28 0 1 3.00 3 2 1 0 0 0 0
..............................................................................................................TGTTATACACAATTTGTTCAGCCAAGGG............. 28 0 1 3.00 3 3 0 0 0 0 0
.............................................................................................................TTGTTATACACAATTTGTTCAGCCA................. 25 0 1 3.00 3 3 0 0 0 0 0
..........................TATGAGTTCTCTACCTAGCGAGACT.................................................................................................... 25 0 1 3.00 3 1 2 0 0 0 0
..........................................................................................................TGATTGTTATACACAATTTGTTCAGCC.................. 27 0 1 3.00 3 0 3 0 0 0 0
..............................................................................................................TGTTATACACAATTTGTTCAGCCAAG............... 26 0 1 3.00 3 3 0 0 0 0 0
............................................................................TGATTGTTGTGTGTGCTGATTTGC................................................... 24 1 3 2.00 6 0 6 0 0 0 0
...................TAATAGGTATGAGTTCTCTACCTAGC.......................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0
...................................................................................................................TACACAATTTGTTCAGCCAAGGGCAC.......... 26 0 1 2.00 2 1 1 0 0 0 0
......................TAGGTATGAGTTCTCTACCTAGCGAG....................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................................GATTGTTATACACAATTTGTTCAGCC.................. 26 0 1 2.00 2 0 2 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCA.................................................. 25 1 3 2.00 6 4 1 1 0 0 0
............................................................................TTAATGTTGTGTGTGCTGATTTGCTGG................................................ 27 1 3 1.67 5 0 5 0 0 0 0
............................................................................TGAATGGTGTGTGTGCTGATTTGC................................................... 24 1 3 1.33 4 0 0 0 4 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTT................................................. 26 1 3 1.33 4 1 1 1 1 0 0
...........................................................................GTGAATGTTGTGTGTGCTGATTTGC................................................... 25 0 3 1.00 3 2 0 1 0 0 0
.................................................................................................................TATACACCATTTGTTCAGCCAAGGGCAC.......... 28 1 1 1.00 1 0 1 0 0 0 0
......................TAGGTATGAGTTCTCTACCTAGCGAGA...................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
......................TAGGTATGAGTTCTCTACCT............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................TGTTATACACAATTTGTTCAGCCAAGGGC............ 29 0 1 1.00 1 1 0 0 0 0 0
....................................CTACCTAGCGAGACTTGTGGGC............................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................TGTTATACACAATTTGTTCAGCCA................. 24 0 1 1.00 1 1 0 0 0 0 0
.............................................................................GAATGTTGTGTGTGCTGATTTGCT.................................................. 24 0 3 1.00 3 3 0 0 0 0 0
.............................................................................................................TTGTTATACACAATTTGTTCAGCCAAGG.............. 28 0 1 1.00 1 1 0 0 0 0 0
.....................................TACCTAGCGAGACTTGTGGGCATGCA........................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................TATACACAATTTGTTCAGCCAAGGGCAC.......... 28 0 1 1.00 1 0 1 0 0 0 0
...........................ATGAGTTCTCTACCTAGCGAGACTTG.................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................TACACAATTTGTTCAGCCAAGGGC............ 24 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................TTGTTATACACAATTTGTTCAGCCAA................ 26 0 1 1.00 1 1 0 0 0 0 0
.................................TCTCTACCTAGCGAGACTTGTGGGCAA........................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
......................TAGGTATGAGTTCTCTACCTAGCGAGACC.................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................TGGATTGTTATACGCAATTTGTTCAGCC.................. 28 2 1 1.00 1 0 1 0 0 0 0
.................................................................................GTTGTGTGTGCTGATTTGC................................................... 19 0 3 1.00 3 1 2 0 0 0 0
.............................................................................GAATGTTGTGTGTGCTGATTTGCTG................................................. 25 0 3 1.00 3 3 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTTCTGG................................................ 27 1 3 1.00 3 1 1 0 1 0 0
...................................TCTACCTAGCGAGACTTGTGGGC............................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
..........................TATGAGTTCTCTACCTAGCGAGAC..................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................................GTTGTGTGTGCTGATTTGCTGG................................................ 22 0 3 1.00 3 3 0 0 0 0 0
......................TCTTTATGAGTTCTCTACCTAGCG......................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..............................................................................................................TGTTATACACAATTTGTTCAGCCAAGG.............. 27 0 1 1.00 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGGGTGCTGATTTG.................................................... 23 1 3 1.00 3 3 0 0 0 0 0
......................TTGTTATGAGTTCTCTACCTAGCGAGACT.................................................................................................... 29 2 1 1.00 1 1 0 0 0 0 0
......TTCACGCATTTACTAATAGGTATGAGT...................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...TATTTCACGCATTTACTAATAGGTATGAG....................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
...................................TCTACCTAGCGAGACTTGTGGGCATGCGC....................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................GTTATACACAATTTGTTCAGCCAAG............... 25 0 1 1.00 1 1 0 0 0 0 0
AAATATTTCACGCATTTAC.................................................................................................................................... 19 0 2 1.00 2 0 2 0 0 0 0
..............................................................................AATGTTGTGTGTGCTGATTTGC................................................... 22 0 3 1.00 3 3 0 0 0 0 0
..................................................................................................................ATACACAATTTGTTCAGCCAAGGGC............ 25 0 1 1.00 1 1 0 0 0 0 0
......................TAGGTATGAGTTCTCTACCTAGCGA........................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................TACACAATTTGTTCAGCCAAGGG............. 23 0 1 1.00 1 1 0 0 0 0 0
.......................AGGTATGAGTTCTCTACCTAGCGAGACT.................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
............................................................................TTAATGTTGTGTGTGCTGATTTGCC.................................................. 25 2 3 1.00 3 0 3 0 0 0 0
............................................................................TGAATGTTGTTTGTGCTGATTTGC................................................... 24 1 3 1.00 3 1 2 0 0 0 0
..............................................................................................................TGTTATACACAATTTGTTCAGCC.................. 23 0 1 1.00 1 0 1 0 0 0 0
.............ATTTACTAATAGGTATGAGTTCTCT................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0
...................................TCTACCTAGCGAGACTTGTGGGCATGCAC....................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
............................................................................TGAATTTTGTGTGTGCTGATTTGC................................................... 24 1 3 1.00 3 0 3 0 0 0 0
.........................................................................................................TTGATTGTTATAAACAATTTGTTCAGCC.................. 28 1 1 1.00 1 0 1 0 0 0 0
.......................AGGTATGAGTTCTCTACCTAGCGAG....................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGTTGATTTGC................................................... 24 1 3 1.00 3 0 1 2 0 0 0
................................................................................................TTGCTGGTGTTGATTGTTATACACAATT........................... 28 0 1 1.00 1 1 0 0 0 0 0
................................................................................................TTGCTGGTGTTGATTGTTATACACAAT............................ 27 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................TTGATTGTTATACACAATTTGTTCAGCCA................. 29 0 1 1.00 1 1 0 0 0 0 0
...........................................................................CTGAATGTTGTGTGTGCTGATTTGC................................................... 25 1 3 0.67 2 1 1 0 0 0 0
............................................................................TAAATGTTGTGTGTGCTGATTTGCC.................................................. 25 2 3 0.67 2 0 2 0 0 0 0
............................................................................TGGATGTTGTGTGTGCTGATTTGC................................................... 24 1 3 0.67 2 2 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGAT....................................................... 20 0 3 0.67 2 2 0 0 0 0 0
............................................................................GGAATGTTGTGTGTGCTGATTTGCTG................................................. 26 1 3 0.67 2 2 0 0 0 0 0
............................................................................TGAATGTTGTGGGTGCTGATTTGC................................................... 24 1 3 0.67 2 2 0 0 0 0 0
............................................................................TGAATGTTGTGAGTGCTGATTTGCTGG................................................ 27 1 3 0.67 2 2 0 0 0 0 0
............................................................................TGAATGTTGTGTTTGCTGATTTGC................................................... 24 1 3 0.67 2 1 0 1 0 0 0
......................................................................................................................ACCAGTTGTTCTGCCAAGGGC............ 21 3 3 0.67 2 1 1 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCAA................................................. 26 2 3 0.67 2 2 0 0 0 0 0
....................................................................................GTGTGTGCTGATTTGCTGG................................................ 19 0 3 0.67 2 2 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGT................................................... 24 1 3 0.67 2 0 0 0 2 0 0
.................................................................................GTTGTGTGTGCTGATTTG.................................................... 18 0 3 0.67 2 1 1 0 0 0 0
............................................................................TAAATGTTGTGTGTGCTGATTTGC................................................... 24 1 3 0.67 2 1 1 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGGC............................................... 28 1 3 0.67 2 0 2 0 0 0 0
............................................................................TGAATGTTGTGTGCGCTGATTTGC................................................... 24 1 3 0.67 2 1 0 1 0 0 0
..................................................TTGTGGGCATGCACCTCTTCTCATA............................................................................ 25 0 3 0.67 2 1 1 0 0 0 0
...........................................................................CTGAATGTTGTGTGTGCTGATTTG.................................................... 24 1 3 0.67 2 2 0 0 0 0 0
............................................................................TGCATGTTGTGTGTGCTGATTTGC................................................... 24 1 3 0.67 2 0 2 0 0 0 0
............................................................................TGATTGTTGTGTGTGCTGATTTGCT.................................................. 25 1 3 0.67 2 0 2 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGC................................................ 27 1 3 0.67 2 1 0 1 0 0 0
..............................................................................AATGTTGTGTGTGCTGATTTG.................................................... 21 0 3 0.67 2 2 0 0 0 0 0
............................................................................TGCATGTTGTGTGTGCTGATTTGCTGG................................................ 27 1 3 0.67 2 0 2 0 0 0 0
.........................................TAGCGAGACTTGTGGGCATGCACCTCTTC................................................................................. 29 0 2 0.50 1 0 1 0 0 0 0
.......................................CCTAGCGAGACTTGTGGGCATGCAC....................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0
............................................CGAGACTTGTGGGCATGCACC...................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0
............................................................................................TGATTTGCTGGTGTTGATTGTTA.................................... 23 0 2 0.50 1 1 0 0 0 0 0
.............................................................................GAATGTTGTGTGTGCTGATTT..................................................... 21 0 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTCC................................................ 27 2 3 0.33 1 1 0 0 0 0 0
............................................................................CGAATGTTGTGTGTGCTGATTTGC................................................... 24 1 3 0.33 1 0 0 1 0 0 0
............................................................................TGAATGCTGTGTGGGCTGATCTGC................................................... 24 3 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTTCTGATTTG.................................................... 23 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTTTGTGCTGATTTGCT.................................................. 25 1 3 0.33 1 0 1 0 0 0 0
.........................................................................TAGTGAATGTAGTGTGTGCTGA........................................................ 22 1 3 0.33 1 0 1 0 0 0 0
............................................................................TTAATGTTGTGTGTGCCGATTTGCT.................................................. 25 2 3 0.33 1 0 1 0 0 0 0
......................................................................TCATAGTGAATGTTGTGTGTGCT.......................................................... 23 0 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATGTGC................................................... 24 1 3 0.33 1 0 1 0 0 0 0
............................................................................TGATTTTTGTGTGTGCTGATTTGC................................................... 24 2 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATATTGTGTGTGCTGATTTGCT.................................................. 25 1 3 0.33 1 0 0 0 1 0 0
............................................................................TCAATGTTGTGTGTGCTGATTTGC................................................... 24 1 3 0.33 1 0 1 0 0 0 0
................................................................................TGTGTTGTGTGCTGATTTGCT.................................................. 21 2 3 0.33 1 0 1 0 0 0 0
...........................................................................GTGAATGTTGTGTGTGCTGATTTG.................................................... 24 0 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTATGCTGATTTG.................................................... 23 1 3 0.33 1 1 0 0 0 0 0
...................................................................................TGTGTGTGCTGATTTGCT.................................................. 18 0 3 0.33 1 0 1 0 0 0 0
................................................................................TGTTGTGTGTGCTGATTTGCC.................................................. 21 1 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGTTTTGTGTGCTGATTTGCT.................................................. 25 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGAGTGTGCTGATTTGC................................................... 24 1 3 0.33 1 0 1 0 0 0 0
.................................................................................GGTGTGTGTGCTGATTTGCTGG................................................ 22 1 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTCATTTG.................................................... 23 1 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTGCTGACTTGCTGG................................................ 27 1 3 0.33 1 1 0 0 0 0 0
......................................................................TCATAGTGAATGTTGTGTGTGCTGAT....................................................... 26 0 3 0.33 1 1 0 0 0 0 0
..................................................TTGTGGGCATGCACCTCTTCTCATAGTG......................................................................... 28 0 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTTATTTG.................................................... 23 1 3 0.33 1 1 0 0 0 0 0
...........................................................................TTGAATGTTGTGTGTGCTGATTTGC................................................... 25 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTTCTGATTTGC................................................... 24 1 3 0.33 1 0 1 0 0 0 0
............................................................................TTAATGTTGTGTGTGCTGATTTGCTG................................................. 26 1 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGGTGTGTGTGCTGATTTTCTG................................................. 26 2 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTCC................................................... 24 1 3 0.33 1 0 0 0 1 0 0
......................................................................TCATAGTGAATGTTGTGTGTGC........................................................... 22 0 3 0.33 1 1 0 0 0 0 0
...............................................................................ATGTTGTGTGTGCTGATTTGCTGG................................................ 24 0 3 0.33 1 0 1 0 0 0 0
.................................................................................GTTGTGTGTGCTGATTTGCT.................................................. 20 0 3 0.33 1 1 0 0 0 0 0
....................................................................TCTCATAGTGAATGTTGTGTGTGCTGA........................................................ 27 0 3 0.33 1 0 0 1 0 0 0
............................................................................TTCATGTTGTGTGTGCTGATTTGCC.................................................. 25 3 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGTTATGTGTGCTGATTTGC................................................... 24 1 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTA................................................. 26 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGTTGAGTTGT................................................... 24 3 3 0.33 1 0 0 0 1 0 0
..................................................................................TTGTGTGTGCTGATTTGC................................................... 18 0 3 0.33 1 1 0 0 0 0 0
................................................................................TGTTGTGTGTGCTGATTTGCTC................................................. 22 1 3 0.33 1 1 0 0 0 0 0
.....................ATAGGTATGAGTTCTCCACCTAGC.......................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTATGCTGATTTGCTGG................................................ 27 1 3 0.33 1 0 1 0 0 0 0
............................................................................TTAATGTTGTGTGTGCTGATTTG.................................................... 23 1 3 0.33 1 0 1 0 0 0 0
..........................................................................AGTGAATGTTGTGTGTGCTGATT...................................................... 23 0 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCGGAGTTGC................................................... 24 2 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGCTGCGTTTGCTGATTTGCT.................................................. 25 3 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTGCTCATTTGCTGG................................................ 27 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGA........................................................ 19 0 3 0.33 1 1 0 0 0 0 0
...........................................................................GTGAATGTTGTATGTGCTGATTTGCT.................................................. 26 1 3 0.33 1 0 0 1 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTAG................................................ 27 1 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTGCTGAATTGCTGG................................................ 27 1 3 0.33 1 0 0 1 0 0 0
............................................................................TGGATGGTGTGTGTGCTGGTTTGCT.................................................. 25 3 3 0.33 1 0 0 0 1 0 0
.......................................................................CATAGTGAATGTTGTGTGTG............................................................ 20 0 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTTCTTATTTGC................................................... 24 2 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTTG................................................ 27 1 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGGA............................................... 28 1 3 0.33 1 1 0 0 0 0 0
.....................................................................CTCATAGTGAATGTTGTGTGTGC........................................................... 23 0 3 0.33 1 0 0 0 1 0 0
..............................................................................AATGTTGTGTGTGCTGATCTGC................................................... 22 1 3 0.33 1 0 0 0 1 0 0
.............................................................................GAATGTTGTGTGTGCTGATTTGCTGGT............................................... 27 0 3 0.33 1 1 0 0 0 0 0
............................................................................TAAATGTTGTGTGTGCTGAATTGC................................................... 24 2 3 0.33 1 0 1 0 0 0 0
............................................................................TTAATGTTGTGTGTGCTGATTT..................................................... 22 1 3 0.33 1 0 1 0 0 0 0
..............................................................................AATGTTGTGTGTGCTGATTTGCT.................................................. 23 0 3 0.33 1 1 0 0 0 0 0
.........................................................................TAGTGAATGTTGTGTGTGCTGATT...................................................... 24 0 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTGAGTTGC................................................... 24 1 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGCTGTGTGCGCTGATTTGCT.................................................. 25 2 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGTTGTGTGTGCTAATTTGC................................................... 24 1 3 0.33 1 0 0 0 1 0 0
....................................................................TCTCATAGTGAATGTTGTGTGTGC........................................................... 24 0 3 0.33 1 1 0 0 0 0 0
............................................................................ATAATGTTGTGTGTGCTGATTTGC................................................... 24 2 3 0.33 1 0 1 0 0 0 0
............................................................................TTAATGTTGTGTGTTCTGATTTGC................................................... 24 2 3 0.33 1 0 1 0 0 0 0
................................................................................TGTTGTGTGTGCTGATTTGCTGGTC.............................................. 25 1 3 0.33 1 0 0 1 0 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTTCTG................................................. 26 1 3 0.33 1 0 0 0 1 0 0
...........................................................................GTGAATGTTGTGTGTGCCGATTTGC................................................... 25 1 3 0.33 1 0 0 1 0 0 0
............................................................................TTAATGTTGTGCGTGCTGATTTGC................................................... 24 2 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGTTGTGTGTGATGATTTGA................................................... 24 2 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTGCCGATTTGC................................................... 24 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATATTGTGTGTGCTGATTTGC................................................... 24 1 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTGTGTGCTGATTTTCC.................................................. 25 2 3 0.33 1 0 1 0 0 0 0
...........................................................................ATGAATGTTGTGTGTGCTGATTTG.................................................... 24 1 3 0.33 1 1 0 0 0 0 0
.................................................................TCTTCTCATAGTGAATGTTGTGTGTGCC.......................................................... 28 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGCATGTTGTGTGTGCTGATTTGCT.................................................. 25 1 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATTTTGTGTGTGCTGATTTGCT.................................................. 25 1 3 0.33 1 0 1 0 0 0 0
...............................................................................ATGTTGTGTGTGCTGATTTGCTGGT............................................... 25 0 3 0.33 1 0 0 0 1 0 0
............................................................................TGAATGTTGTTTGTGCTGATTTGCTGG................................................ 27 1 3 0.33 1 1 0 0 0 0 0
............................................................................TTAATGGTGTGTGTGCTGATTTGC................................................... 24 2 3 0.33 1 0 1 0 0 0 0
............................................................................TGAATGTTGTGTGCGCTGATTTG.................................................... 23 1 3 0.33 1 0 0 0 1 0 0
.............................................................................GAATGTTGTGTGTGCTGATTTGT................................................... 23 1 3 0.33 1 1 0 0 0 0 0
............................................................................GGAATGTTGTGTGTGCTGATTTG.................................................... 23 1 3 0.33 1 1 0 0 0 0 0
............................................................................TGAATGTTGTGTTTGCTGA........................................................ 19 1 4 0.25 1 1 0 0 0 0 0
..........................................................................TCTAAATGTTGTGTGTGCTGATT...................................................... 23 3 4 0.25 1 0 1 0 0 0 0
......................................................................................................................ACCAGTTGTTCTGCCAAGGG............. 20 3 9 0.11 1 1 0 0 0 0 0
CAACATTTCACGCATTTAC.................................................................................................................................... 19 2 9 0.11 1 0 1 0 0 0 0
.....................................................................................................GGTGTTGATTGGAATATACA.............................. 20 3 16 0.06 1 0 0 1 0 0 0

Anti-sense strand reads

TTTATAAAGTGCGTAAATGATTATCCATACTCAAGAGATGGATCGCTCTGAACACCCGTACGTGGAGAAGAGTATCACTTACAACACACACGACTAAACGACCACAACTAACAATATGTGTTAAACAAGTCGGTTCCCGTGTCTTTCAGGT
***********************************((.(((((((((.....((.(((((((((...(((.......)))....))))))))).))))))))).)).)).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V056
head
..............................................................TGGAGAAGAGTATCACTTACAACA................................................................. 24 0 3 18.67 56 25 28 1 0 2
............................................................CGTGGAGAAGAGTATCACTTACAACA................................................................. 26 0 3 15.33 46 26 12 7 1 0
...............................................................GGAGAAGAGTATCACTTACAACA................................................................. 23 0 3 12.33 37 33 2 0 2 0
.............................................................GTGGAGAAGAGTATCACTTACAACA................................................................. 25 0 3 4.00 12 11 0 0 1 0
..............................................................CGGAGAAGAGTATCACTTACAACA................................................................. 24 1 3 2.67 8 0 8 0 0 0
................................................................GAGAAGAGTATCACTTACAACA................................................................. 22 0 3 2.00 6 5 1 0 0 0
.........TGCGTAAATGATTATCCATACTC....................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
...........................................................ACGTGGAGAAGAGTATCACTTACAACA................................................................. 27 0 3 2.00 6 6 0 0 0 0
..........................................................TACGTGGAGAAGAGTATCACTTACAACA................................................................. 28 0 3 1.00 3 3 0 0 0 0
........GTGCGTAAATGATTATCCATACTC....................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..........................................................................................CGACTAAACGACCACAACTAACAATATGT................................ 29 0 1 1.00 1 1 0 0 0 0
.............TAAATGATTATCCATACTCAAGA................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................CCACAACTAACAATATGTGTT............................. 21 0 1 1.00 1 0 1 0 0 0
........................CCATACTCAAGAGATGGATCGCT........................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
.......AGTGCGTAAATGATTATCCATACTC....................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................................ATGTGTTAAACAAGTCGGTTCCCGT........... 25 0 1 1.00 1 1 0 0 0 0
.............................................................GTGGAGAAGAGTATCACTTACAAC.................................................................. 24 0 3 1.00 3 3 0 0 0 0
...........CGTAAATGATTATCCATACTC....................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..TATAAAGTGCGTAAATGATTATCCATA.......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
............................................................CGTGGAGAAGAGTATCACTTACAA................................................................... 24 0 3 0.67 2 1 1 0 0 0
............................................................CGTGGAGAAGAGTATCACTTA...................................................................... 21 0 3 0.67 2 2 0 0 0 0
............................................................CGTGGAGAAGAGTATCACTTACAAC.................................................................. 25 0 3 0.67 2 2 0 0 0 0
..............................................................TGGAGAAGAGTATCACTTACTACA................................................................. 24 1 3 0.67 2 0 2 0 0 0
..............................................TCTGAACACCCGTACGTGGAGAAGAGT.............................................................................. 27 0 2 0.50 1 1 0 0 0 0
.......................................................................................ACACGACTAAACGACCACAAC........................................... 21 0 2 0.50 1 1 0 0 0 0
..........................................................................................CGACTAAACGACCACAACTAACA...................................... 23 0 2 0.50 1 0 1 0 0 0
..........................................................................................CGACTAAACGACCAAAACTAACA...................................... 23 1 2 0.50 1 0 1 0 0 0
............................................................................................ACTAAACGACCACAACTAACAATA................................... 24 0 2 0.50 1 1 0 0 0 0
......................................................................................CACACGACTAAACGACCACAACTAACAAT.................................... 29 0 2 0.50 1 1 0 0 0 0
...............................................CTGAACACCCGTACGTGGAGAATAGTAT............................................................................ 28 1 2 0.50 1 0 1 0 0 0
..................................................................GAAGAGTATCACTTACAAAAC................................................................ 21 1 3 0.33 1 0 1 0 0 0
.........................................................CTACGTGGAGAAGAGTATCACTTACAACA................................................................. 29 1 3 0.33 1 1 0 0 0 0
..............................................................CGGAGAAGAGTATCACTTACAAGA................................................................. 24 2 3 0.33 1 0 1 0 0 0
..........................................................TACGTGGAGAAGAGTATCAC......................................................................... 20 0 3 0.33 1 1 0 0 0 0
.......................................................CCGTACGTGGAGAAGAGTATC........................................................................... 21 0 3 0.33 1 0 0 0 1 0
................................................................GAGAAGAGTATCACTTACAACAC................................................................ 23 0 3 0.33 1 0 1 0 0 0
...............................................................GGAGAAGAGTATCACTTACAACG................................................................. 23 1 3 0.33 1 0 1 0 0 0
..............................................................CGGAGAAGAGTATCACTTA...................................................................... 19 1 3 0.33 1 0 1 0 0 0
............................................................CGTGGAGAAGAGTATCACTTACAACAA................................................................ 27 1 3 0.33 1 1 0 0 0 0
............................................................TGTGGAGAAGAGTATCACTTACAACA................................................................. 26 1 3 0.33 1 0 0 0 1 0
...............................................................GGAGAAGAGTATAACTTACAACA................................................................. 23 1 3 0.33 1 0 1 0 0 0
..........................................................AACGTGGAGAAGAGTATCACTTACAACA................................................................. 28 1 3 0.33 1 1 0 0 0 0
.............................................................GTGGAGAAGAGTATCACTTACAACAC................................................................ 26 0 3 0.33 1 1 0 0 0 0
...........................................................ACGTGGAGAAGAGTATCACTTA...................................................................... 22 0 3 0.33 1 1 0 0 0 0
............................................................CGTGGAGAAGAGTATCACTTACAAAA................................................................. 26 1 3 0.33 1 0 0 1 0 0
............................................................CGTTGAGAAGAGTATCACTTACAACA................................................................. 26 1 3 0.33 1 0 1 0 0 0
..................................................................GAAGAGTATCACTTACAACA................................................................. 20 0 3 0.33 1 0 1 0 0 0
..........................................................TACGCGGAGAAGAGTATCACTTACAACA................................................................. 28 1 3 0.33 1 0 1 0 0 0
...............................................................GGAGAAGAGTATCACTTACAAC.................................................................. 22 0 3 0.33 1 1 0 0 0 0
................................................................GAGAAGAGTATCACTTACAAC.................................................................. 21 0 3 0.33 1 1 0 0 0 0
...........................................................ACGTGGAGAAGAGTATCACTTACAAC.................................................................. 26 0 3 0.33 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:291840-291990 - dmo_333 AAATATTTCACGCATTTACTAATAGGTATGAGTTCTCTACCTAGCGAGACTTGTGGGCATGCACCTCTTCTCATAGTGAATGTTGTGTGTGCTGATTTGCTGGTGTTGATTGTTATACACAATTTGTTCAGCCAAGGGCACA--------GAAAGTCCA
droVir3 scaffold_12728:320812-320961 - GATAATTGG-GCGTTGTGCTCTCCGGAATCTGTATTCCATCTAGGATAACTAGAGGACAGTCCCCTTTACGCAAGGTGAAGGTTGTATGTGTGGACTTCTCTTGGTTGATCGCGATGTTCCACCTTTTCAGCCAGCTGTCCA--------GGGAGTCCT
droGri2 scaffold_14928:29057-29165 + AGGTAGCGAACATGGTTCTCCTGAGGTATGACCGTGTTATTGAGTCGGACAGTTGGACAATTACCATTCCTCAGCGCGAACGTGCGGTGCTGAGACTTGCTCCCATTGA--------------------------------------------------
droWil2 scf2_1100000004967:3263757-3263907 - AGGTACTTGGCTTCAGCCGATCTGGGGATGGTTGGACCATCCAACGTTACTGGTGGGCAGTCGTCTCTTTTCAATGCGAAGGTGGTGTGTTGGGACTTTTCTGCGTTGATTGTTATGCACCACTTTTCCAGCCATGGACTCA--------CCAAGTTAA
dp5 XL_group1a:2786743-2786887 + AGGTATTTCACCATTTCGCCTAATCGGATGGTGGATCCATTGGGTGAAACTGTAGGACAATTTCCTGGTCTCAGCGAGTATGTGACTTACACTGCCTTTTGGGCGTTCACCACTAATCTCCACTTTTTATACCCAATACTCA--------AAA------
droPer2 scaffold_12:522618-522754 - AGGTATTTCGCCT--------AATCGGATGGTGGATCCATTGGGTGAAACTGTAGGACAATTTCCTGGTCTCAGCGAGTATGTGACTTACACTGCCTTTTGGGCGTTCACCACTAATCTCCACTTTTTATACCCAATACTCA--------AAA------
droAna3 scaffold_13089:758692-758842 + AGATATTTGACAGTTGGGCTTGCAGGTATTAAAATGCCACCGAGACTGACTTCAGGACAGTCGCCTCTCCTTAGGGTAAAAGTCATCTGGGCTGATTTGTCGTGGTTGACGGCAATGTTCCATCTACGAAGCCACGGGTCAA--------GAATATTAA
droBip1 scf7180000393358:709-859 + AGATATTTGGGTGTAGGGCTTGCTGGAATTGGAGTGCCTCCGAGACTGACTTCAGGACAGTCGCCTCTCCTCATTGTAAAAGTCGTTTGGGCTGATTTTTCGTGGTTGACGGCAATGTTCCACCTTCGAAGCCACGGATCAA--------GGATGTCCA
droKik1 scf7180000302488:1608-1757 - AGATACTTCACACAGGTATCTTGTGGAATTGCTGAACCGTTCAGTGTGACATTTGGGCAGTTTCCTGGTCTTAGTGCAAATGTTATTTGGACAGATTTC-GAGAGTTGATTTTAATTTTCCAGCGAAGAAACCAGGCTTCAA--------TCAGATTGA
droFic1 scf7180000453140:4510-4660 + AGGTATTTCGGGTTTGGATCATCCGGGATGACAACTCCATTGAGGGTGACTGGCGGGCAGTTACCTTGTCGTAGAGTGAAGGTGGTCTGGGTGGATTTGTCCTCGTTGACGGTGATGTTCCAGCTCCGTAGGCAGGGTTCAA--------TAGCATCCA
droEle1 scf7180000490464:47238-47388 - AGATACTTCACACAGGTATCTTATGGAATTTCTGAGCCGTTAAGGGTGACATTTGGGCAGTTTCCTGGTCTTAGTGCAAAAGGTATTTGGACAGACTTCAGGGAGTTGATTTTAATTTTCCAGCGAAGGAACCAGGCTTCAA--------TCAGACTGA
droRho1 scf7180000772256:495-645 - AGGTATTTAACACTTTCGCATTCTGGGATGTTCACGCCACCCAGTATCACCGGAGGACATTTATCTTTTCTTAAGGCAAATGTTATTTGTATTGACTTTTGAGTGTTGACAACTATCTTCCATCTGTTTAGCCAGTTTTCTA--------TTAAATGGA
droBia1 scf7180000302124:23399-23557 - AGGTACGTTACAACGTCAGCTTGTGGAAGTGGCGTGTTATTTAGAGTTAGCGGGGGACACGTTTGTCTGTTAAGAGTAAACGATATGTGCTTACACTTTTGCCCATTTATTTTTATACGCCAGTCTGATAACCACCTCTCCACCACCACAAGATGATCA
droTak1 scf7180000410477:14092-14242 - AGATATTTGGCCGTCGTCTGCTGCGGGATAGGTGCGCCGTTTATTGAGACCGCCGGGGAGATTCCTGGCCTCAGCGTAAAAGTAGTATGTGTAGATTTCTCAGCATTTATGACGACGTTCTACCTCTTCAACCATGGCTCTA--------AGTTGTCAA
droEug1 scf7180000407620:566-714 + AGGTATTTGGGGGTCGGGTCGTTAGGGGTAATACTACCTCCGAGGCTGAC-GGAGGACAATCACCATACCGTAACGG-AAAGTAGTTTGCGTTGACTGCTCGGGGTTGACTTTTATATTCCACCTTCGAATCCAGGGGTGAA--------GGATGTCCA
dm3 chr3L:23957951-23958101 - AAGTATTTCGGCATTGGTTCAACGGGTATAGAGACTCCATTTAGGGAGACAGGCGGGCAGTCTCCTCTACTCAAAGAGAAAGTAGACTGTGTGGATTTGTCCTCATTGACGGTAATATTCCATCTGCGCAACCAAGGCTCGA--------TAGTATCCA
droSim2 node_10401:60-210 - AGGTATTTGGGGGTGCTGGTAGTAGGGATCGTGTCGCCGTCAAGAGTAACCGGAGGGCATTCTCCTCTGCGCAGGGAAAATGTTGTGTGGGAGGATTTTTCGGCATTGACCGTAATATTCCATCGTTTCAGCCATGGATTCA--------GAGCATCCA
droSec2 scaffold_766:6037-6187 - AGGTATTTGGGGGTGCTGGTAGTAGGGATCGTGTCGCCGTCAAGAGTGACCGGAGGGCATTCTCCTCTGCGCAGGGAAAATGTTGTGTGGGAGGATTTTTCGGCGTTGACTGCAATATTCCATCGTTTCAGCCATGGATTCA--------GAGCATCCA
droYak3 X:21637291-21637441 - AGGTATTTCGGGGAGCTTGAGGATAGGATGGTTTCTCCATTGAGTGTAACTGGGGGGCAATCTCCTCTGCGCAGCGAGAATGTGGTGTGGGATGACTTCTCTGTATTAACTGCGATGTTCCATCGTTTCAGCCATGGATCGA--------GAGCATCCA
droEre2 scaffold_4710:97541-97691 + AGGTATTTGGGGGTGCTGGTGGTAGGGATGGTGTCGCCGTCGAGTGTGACCGGGGGGCATTCTCCTCTGCGCAGAGAGAAGGTTGTGTGGGAGGATTTGTCAGCATTAACCATGATGTTCCAACGTTTCAGCCATGGATCCA--------GTGCATCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AAATATTTCACGCATTTACTAATAGGTATGAGTTCTCTACCTAGCGAGACTTGTGGGCATGCACCTCTTCTCATAGTGAATGTTGTGTGTGCTGATTTGCTGGTGTTGATTGTTATACACAATTTGTTCAGCCAAGGGCACA--------GAAAGTCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................TGAATGTTGTGTGTGCTGATTTGC...........................................................243276.6783035918711102180
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGG........................................................273104.003122474001942
............................................................................TGAATGTTGTGTGTGCTGATTTG............................................................23385.332562251000318
............................................................................TGAATGTTGTGTGTGCTGATTTGCT..........................................................25358.001748410004535
............................................................................TGAATGTTGTGTGTGCTGATTTGCTG.........................................................26324.33736610015
.............................................................................GAATGTTGTGTGTGCTGATTTGC...........................................................23310.67323200000
......................TAGGTATGAGTTCTCTACCTAGCGAGAC.............................................................................................................2819.009400050
............................................................................TGAATGTTGTGTGTGCTGATTT.............................................................2237.00211800021
......................TAGGTATGAGTTCTCTACCTAGCGAGACT............................................................................................................2916.006100050
............................................................................TGAATGTTGTGTGTGCTGATTTGCC..........................................................2535.67171000115
.............................................................................GAATGTTGTGTGTGCTGATTTG............................................................2235.67171600010
.............................................................................GAATGTTGTGTGTGCTGATTTGCTGG........................................................2635.33161500010
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGGT.......................................................2834.3313600052
.....................................TACCTAGCGAGACTTGTGGGCATGCAC...............................................................................................2714.004200020
.................................TCTCTACCTAGCGAGACTTGTGGGCA....................................................................................................2614.004400000
............................................................................TGAATGTTGTGTGTGCTGATTTGCTC.........................................................2633.3310700003
............................................................................TGAATGTTGTGTGTGCTGATT..............................................................2133.009610011
.........................................................................................................TTGATTGTTATACACAATTTGTTCAGCC..........................2813.003200010
..............................................................................................................TGTTATACACAATTTGTTCAGCCAAGGG.....................2813.003300000
.............................................................................................................TTGTTATACACAATTTGTTCAGCCA.........................2513.003300000
..........................TATGAGTTCTCTACCTAGCGAGACT............................................................................................................2513.003100020
..........................................................................................................TGATTGTTATACACAATTTGTTCAGCC..........................2713.003000030
..............................................................................................................TGTTATACACAATTTGTTCAGCCAAG.......................2613.003300000
...................TAATAGGTATGAGTTCTCTACCTAGC..................................................................................................................2612.002200000
...................................................................................................................TACACAATTTGTTCAGCCAAGGGCAC..................2612.002100010
......................TAGGTATGAGTTCTCTACCTAGCGAG...............................................................................................................2612.002200000
...........................................................................................................GATTGTTATACACAATTTGTTCAGCC..........................2612.002000020
............................................................................TGAATGTTGTGTGTGCTGATTTGCA..........................................................2532.006400011
............................................................................TGAATGTTGTGTGTGCTGATTTGCTT.........................................................2631.334110011
...........................................................................GTGAATGTTGTGTGTGCTGATTTGC...........................................................2531.003200001
......................TAGGTATGAGTTCTCTACCTAGCGAGA..............................................................................................................2711.001100000
......................TAGGTATGAGTTCTCTACCT.....................................................................................................................2011.001100000
..............................................................................................................TGTTATACACAATTTGTTCAGCCAAGGGC....................2911.001100000
....................................CTACCTAGCGAGACTTGTGGGC.....................................................................................................2211.001100000
..............................................................................................................TGTTATACACAATTTGTTCAGCCA.........................2411.001100000
.............................................................................GAATGTTGTGTGTGCTGATTTGCT..........................................................2431.003300000
.............................................................................................................TTGTTATACACAATTTGTTCAGCCAAGG......................2811.001100000
.....................................TACCTAGCGAGACTTGTGGGCATGCA................................................................................................2611.001100000
.................................................................................................................TATACACAATTTGTTCAGCCAAGGGCAC..................2811.001000010
...........................ATGAGTTCTCTACCTAGCGAGACTTG..........................................................................................................2611.001100000
...................................................................................................................TACACAATTTGTTCAGCCAAGGGC....................2411.001000001
.............................................................................................................TTGTTATACACAATTTGTTCAGCCAA........................2611.001100000
.................................TCTCTACCTAGCGAGACTTGTGGGCAA...................................................................................................2711.001100000
......................TAGGTATGAGTTCTCTACCTAGCGAGACC............................................................................................................2911.001000010
.................................................................................GTTGTGTGTGCTGATTTGC...........................................................1931.003100020
.............................................................................GAATGTTGTGTGTGCTGATTTGCTG.........................................................2531.003300000
...................................TCTACCTAGCGAGACTTGTGGGC.....................................................................................................2311.001100000
..........................TATGAGTTCTCTACCTAGCGAGAC.............................................................................................................2411.001100000
.................................................................................GTTGTGTGTGCTGATTTGCTGG........................................................2231.003300000
..............................................................................................................TGTTATACACAATTTGTTCAGCCAAGG......................2711.001100000
......TTCACGCATTTACTAATAGGTATGAGT..............................................................................................................................2711.001100000
...TATTTCACGCATTTACTAATAGGTATGAG...............................................................................................................................2911.001100000
...............................................................................................................GTTATACACAATTTGTTCAGCCAAG.......................2511.001100000
AAATATTTCACGCATTTAC............................................................................................................................................1921.002000020
..............................................................................AATGTTGTGTGTGCTGATTTGC...........................................................2231.003300000
..................................................................................................................ATACACAATTTGTTCAGCCAAGGGC....................2511.001100000
......................TAGGTATGAGTTCTCTACCTAGCGA................................................................................................................2511.001100000
...................................................................................................................TACACAATTTGTTCAGCCAAGGG.....................2311.001100000
.......................AGGTATGAGTTCTCTACCTAGCGAGACT............................................................................................................2811.001100000
..............................................................................................................TGTTATACACAATTTGTTCAGCC..........................2311.001000010
.............ATTTACTAATAGGTATGAGTTCTCT.........................................................................................................................2511.001000010
...................................TCTACCTAGCGAGACTTGTGGGCATGCAC...............................................................................................2911.001000010
.......................AGGTATGAGTTCTCTACCTAGCGAG...............................................................................................................2511.001100000
................................................................................................TTGCTGGTGTTGATTGTTATACACAATT...................................2811.001100000
................................................................................................TTGCTGGTGTTGATTGTTATACACAAT....................................2711.001100000
.........................................................................................................TTGATTGTTATACACAATTTGTTCAGCCA.........................2911.001100000
............................................................................TGAATGTTGTGTGTGCTGAT...............................................................2030.672200000
............................................................................TGAATGTTGTGTGTGCTGATTTGCAA.........................................................2630.672200000
....................................................................................GTGTGTGCTGATTTGCTGG........................................................1930.672200000
............................................................................TGAATGTTGTGTGTGCTGATTTGT...........................................................2430.672020000
.................................................................................GTTGTGTGTGCTGATTTG............................................................1830.672100010
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGGC.......................................................2830.672000020
..................................................TTGTGGGCATGCACCTCTTCTCATA....................................................................................2530.672100010
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGC........................................................2730.672100001
..............................................................................AATGTTGTGTGTGCTGATTTG............................................................2130.672200000
.........................................TAGCGAGACTTGTGGGCATGCACCTCTTC.........................................................................................2920.501000010
.......................................CCTAGCGAGACTTGTGGGCATGCAC...............................................................................................2520.501000010
............................................CGAGACTTGTGGGCATGCACC..............................................................................................2120.501000010
............................................................................................TGATTTGCTGGTGTTGATTGTTA............................................2320.501100000
.............................................................................GAATGTTGTGTGTGCTGATTT.............................................................2130.331100000
............................................................................TGAATGTTGTGTGTGCTGATTTGCTCC........................................................2730.331100000
......................................................................TCATAGTGAATGTTGTGTGTGCT..................................................................2330.331000010
...........................................................................GTGAATGTTGTGTGTGCTGATTTG............................................................2430.331100000
...................................................................................TGTGTGTGCTGATTTGCT..........................................................1830.331000010
................................................................................TGTTGTGTGTGCTGATTTGCC..........................................................2130.331000010
......................................................................TCATAGTGAATGTTGTGTGTGCTGAT...............................................................2630.331100000
..................................................TTGTGGGCATGCACCTCTTCTCATAGTG.................................................................................2830.331100000
......................................................................TCATAGTGAATGTTGTGTGTGC...................................................................2230.331100000
...............................................................................ATGTTGTGTGTGCTGATTTGCTGG........................................................2430.331000010
.................................................................................GTTGTGTGTGCTGATTTGCT..........................................................2030.331100000
....................................................................TCTCATAGTGAATGTTGTGTGTGCTGA................................................................2730.331000001
............................................................................TGAATGTTGTGTGTGCTGATTTGCTA.........................................................2630.331100000
..................................................................................TTGTGTGTGCTGATTTGC...........................................................1830.331100000
................................................................................TGTTGTGTGTGCTGATTTGCTC.........................................................2230.331100000
..........................................................................AGTGAATGTTGTGTGTGCTGATT..............................................................2330.331100000
............................................................................TGAATGTTGTGTGTGCTGA................................................................1930.331100000
.......................................................................CATAGTGAATGTTGTGTGTG....................................................................2030.331100000
............................................................................TGAATGTTGTGTGTGCTGATTTGCTGGA.......................................................2830.331100000
.....................................................................CTCATAGTGAATGTTGTGTGTGC...................................................................2330.331010000
.............................................................................GAATGTTGTGTGTGCTGATTTGCTGGT.......................................................2730.331100000
..............................................................................AATGTTGTGTGTGCTGATTTGCT..........................................................2330.331100000
.........................................................................TAGTGAATGTTGTGTGTGCTGATT..............................................................2430.331100000
....................................................................TCTCATAGTGAATGTTGTGTGTGC...................................................................2430.331100000
................................................................................TGTTGTGTGTGCTGATTTGCTGGTC......................................................2530.331000001
.................................................................TCTTCTCATAGTGAATGTTGTGTGTGCC..................................................................2830.331100000
...............................................................................ATGTTGTGTGTGCTGATTTGCTGGT.......................................................2530.331010000
.............................................................................GAATGTTGTGTGTGCTGATTTGT...........................................................2330.331100000
droVir3
GATAATTGG-GCGTTGTGCTCTCCGGAATCTGTATTCCATCTAGGATAACTAGAGGACAGTCCCCTTTACGCAAGGTGAAGGTTGTATGTGTGGACTTCTCTTGGTTGATCGCGATGTTCCACCTTTTCAGCCAGCTGTCCA--------GGGAGTCCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
AGGTAGCGAACATGGTTCTCCTGAGGTATGACCGTGTTATTGAGTCGGACAGTTGGACAATTACCATTCCTCAGCGCGAACGTGCGGTGCTGAGACTTGCTCCCATTGA--------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AGGTACTTGGCTTCAGCCGATCTGGGGATGGTTGGACCATCCAACGTTACTGGTGGGCAGTCGTCTCTTTTCAATGCGAAGGTGGTGTGTTGGGACTTTTCTGCGTTGATTGTTATGCACCACTTTTCCAGCCATGGACTCA--------CCAAGTTAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................TACTGGTGGGCAGTCGTCTCTTTT........................................................................................2476.1443061360
..........................................................................................................TGATTGTTATGCACCACTTTTCCAGCCA.........................2873.2923018050
..........................................................................................TGGGACTTTTCTGCGTTGATTGTTA............................................2543.0012010020
.......................................TCCAACGTTACTGGTGGGCAGTCG................................................................................................2442.751109020
..............................................TTACTGGTGGGCAGTCGTCTCTTTT........................................................................................2572.4317020150
...TACTTGGCTTCAGCCGATCTGGGGA...................................................................................................................................2512.00202000
.....................................................................................................TGCGTTGATTGTTATGCACCACTTT.................................2581.8815013020
.......................................TCCAACGTTACTGGTGGGCAGTCGT...............................................................................................2541.75705020
...............................................................TCTCTTTTCAATGCGAAGGTGGTGT.......................................................................2521.50300030
.......................................................................................TGTTGGGACTTTTCTGCGTTGATTG...............................................2541.50603030
..........................................................................................................TGATTGTTATGCACCACTTTTCCAGC...........................2671.431009010
...................................................................................................TCTGCGTTGATTGTTATGCACCACTTT.................................2781.13908010
.....................................................................................TGTGTTGGGACTTTTCTGCGTTGAT.................................................2541.00401030
..................................................................................................TTCTGCGTTGATTGTTATGCACCACTT..................................2781.00808000
..............................................TTACTGGTGGGCAGTCGTCTCTTT.........................................................................................2470.86600150
...............................................TACTGGTGGGCAGTCGTCTCTTT.........................................................................................2370.86600060
.....................................................................................TGTGTTGGGACTTTTCTGCGTTGATT................................................2640.75302010
.......................................................................................TGTTGGGACTTTTCTGCGTTGATTGT..............................................2640.75300030
..........................................................................................TGGGACTTTTCTGCGTTGATTGTTAT...........................................2640.75302010
..........................................................................................TGGGACTTTTCTGCGTTGATTGTTATG..........................................2740.75302010
...........................................................................................................GATTGTTATGCACCACTTTTCCAGCCA.........................2770.71505000
...................................................................................................TCTGCGTTGATTGTTATGCACCACTT..................................2680.63504010
..........................................................................................................TGATTGTTATGCACCACTTTTCCAG............................2570.57404000
.................................................................TCTTTTCAATGCGAAGGTGGTGT.......................................................................2320.50101000
............................................................TCGTCTCTTTTCAATGCGAAGGTGGT.........................................................................2620.50100010
...................................................................................................TCTGCGTTGATTGTTATGCACCAC....................................2480.50403010
.................................................................................................TTTCTGCGTTGATTGTTATGCACCACTT..................................2880.50404000
..................................................................................TGGTGTGTTGGGACTTTTCTGCGTTGT..................................................2720.50101000
...............................................TACTGGTGGGCAGTCGTCTCTTTTCAA.....................................................................................2720.50100010
..........................................................................................TGGGACTTTTCTGCGTTGATTGT..............................................2340.50200020
.......................................TCCAACGTTACTGGTGGGCAGTCGTC..............................................................................................2640.50202000
...................................................................................................................TGCACCACTTTTCCAGCCATGGACT...................25100.40404000
.................................................................................................TTTCTGCGTTGATTGTTATGCACCACT...................................2780.38303000
.................................................................................................................TATGCACCACTTTTCCAGCCATGGACT...................2770.29202000
................................................................................................................TTATGCACCACTTTTCCAGCCATGGACT...................2870.29201010
..........................................................................................................TGATTGTTATGCACCACTTTTCCA.............................2470.29202000
....................................................................TTTCAATGCGAAGGTGGTGTGT.....................................................................2270.29202000
..................................................................................................TTCTGCGTTGATTGTTATGCACCACTTT.................................2880.25201010
.................................................................................................TTTCTGCGTTGATTGTTATGCACCAC....................................2680.25202000
.....................................................................................TGTGTTGGGACTTTTCTGCGTTGATTT...............................................2740.25101000
.......................................TCCAACGTTACTGGTGGGCAGTCGTCT.............................................................................................2740.25101000
.......................................................................................TGTTGGGACTTTTCTGCGTTGATA................................................2440.25100010
..................................................................................................TTCTGCGTTGATTGTTATGCACCACT...................................2680.25201010
.........................................................................................TTGGGACTTTTCTGCGTTGATT................................................2240.25101000
......................................ATCCAACGTTACTGGTGGGCAGTCG................................................................................................2540.25100010
.....................................CATCCAACGTTACTGGTGGGCAGTCG................................................................................................2640.25101000
........................................................................................GTTGGGACTTTTCTGCGTTGATTGT..............................................2540.25100010
.....................................................................................TGTGTTGGGACTTTTCTGCGTTG...................................................2340.25100010
..........................................................................................TGGGACTTTTCTGCGTTGATTGTT.............................................2440.25100010
.....................................................................................TGTGTTGGGACTTTTCTGCGTTGATTG...............................................2740.25100010
..........................................................................................................TGATTGTTATGCACCACTTTTCCAGCC..........................2770.14101000
............................................CGTTACTGGTGGGCAGTCGTCTCTTTT........................................................................................2770.14100010
...........................................ACGTTACTGGTGGGCAGTCGTCTCT...........................................................................................2570.14100010
.........................................CAACGTTACTGGTGGGCAGTCG................................................................................................2270.14100010
...............................................TACTGGTGGGCAGTCGTCTCTTTTA.......................................................................................2570.14100010
.....................................................................TTCAATGCGAAGGTGGTGTG......................................................................2070.14100010
.............................................GTTACTGGTGGGCAGTCGTCTCTT..........................................................................................2470.14101000
..............................................................................................................TGTTATGCACCACTTTTCCAGCCAT........................2570.14101000
.....................................................................TTCAATGCGAAGGTGGTGTGTTGGGA................................................................2670.14101000
..............................................TTACTGGTGGGCAGTCGTCTCTTTTGG......................................................................................2770.14100010
............................................CGTTACTGGTGGGCAGTCGTCTCTTTG........................................................................................2770.14100010
............................................CGTTACTGGTGGGCAGTCGTCTCTT..........................................................................................2570.14100010
.........................................CAACGTTACTGGTGGGCAGTCGT...............................................................................................2370.14101000
...........................................................................................................GATTGTTATGCACCACTTTTCCAG............................2470.14101000
............................................CGTTACTGGTGGGCAGTCGTCTCT...........................................................................................2470.14101000
................................................ACTGGTGGGCAGTCGTCTCTTTT........................................................................................2370.14101000
.............................................................................................................TTGTTATGCACCACTTTTCCAGCCA.........................2570.14100010
..............................................TTACTGGTGGGCAGTCGTCTCTTTTGT......................................................................................2770.14100010
.............................................................................................................TTGTTATGCACCACTTTTCCAGCC..........................2470.14101000
..........................................................................................................TGATTGTTATGCACCACTTTTCCAGCCAT........................2970.14101000
..................................................TGGTGGGCAGTCGTCTCTTT.........................................................................................2070.14100010
..............................................TTACTGGTGGGCAGTCGTCTCTTTA........................................................................................2570.14100010
............................................................................CGAAGGTGGTGTGTTGGGACT..............................................................2170.14100100
............................................CGTTACTGGTGGGCAGTCGTCTCTTTA........................................................................................2770.14100010
..............................................................................................................TGTTATGCACCACTTTTCCAGCCATG.......................2670.14100010
.....................................................................TTCAATGCGAAGGTGGTGT.......................................................................1970.14100100
......................................................................TCAATGCGAAGGTGGTGTGTTGG..................................................................2370.14101000
.....................................................................TTCAATGCGAAGGTGGTGTGTTG...................................................................2370.14101000
...............................................TACTGGTGGGCAGTCGTCTCTTA.........................................................................................2370.14100010
................................................................................................TTTTCTGCGTTGATTGTTATGCACCACT...................................2880.13101000
.....................................................................................................TGCGTTGATTGTTATGCACCACTT..................................2480.13101000
...........................................................................................................GATTGTTATGCACCACTTTT................................2080.13101000
................................................................................................TTTTCTGCGTTGATTGTTATGCACC......................................2580.13101000
.................................................................................................TTTCTGCGTTGATTGTTATGCACCACTTT.................................2980.13101000
...................................................................................................TCTGCGTTGATTGTTATGCACCACT...................................2580.13101000
...................................................................................................TCTGCGTTGATTGTTATGCACCACCC..................................2680.13101000
................................................................................................TTTTCTGCGTTGATTGTTATGCACCA.....................................2680.13101000
............................................................................................GGACTTTTCTGCGTTGATTGTTATG..........................................2580.13101000
......................................................................................................GCGTTGATTGTTATGCACCACTT..................................2380.13101000
..............................................................................................................................TCCAGCCATGGACTCA--------CCAAGT...22100.10101000
.....................................................................................................................CACCACTTTTCCAGCCATGGACT...................23100.10101000
..................................................................................................................ATGCACCACTTTTCCAGCCATGGAC....................25100.10101000
...................................................................................................................TGCACCACTTTTCCAGCCA.........................19100.10100010
dp5
AGGTATTTCACCATTTCGCCTAATCGGATGGTGGATCCATTGGGTGAAACTGTAGGACAATTTCCTGGTCTCAGCGAGTATGTGACTTACACTGCCTTTTGGGCGTTCACCACTAATCTCCACTTTTTATACCCAATACTCA--------AAA------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AGGTATTTCGCCT--------AATCGGATGGTGGATCCATTGGGTGAAACTGTAGGACAATTTCCTGGTCTCAGCGAGTATGTGACTTACACTGCCTTTTGGGCGTTCACCACTAATCTCCACTTTTTATACCCAATACTCA--------AAA------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AGATATTTGACAGTTGGGCTTGCAGGTATTAAAATGCCACCGAGACTGACTTCAGGACAGTCGCCTCTCCTTAGGGTAAAAGTCATCTGGGCTGATTTGTCGTGGTTGACGGCAATGTTCCATCTACGAAGCCACGGGTCAA--------GAATATTAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................TGCCACCGAGACTGACTTCAGGACAGT..................................................................................................2716.006510000
...................................................................................................................TGTTCCATCTACGAAGCCACGGGT....................2444.5018920160
..................................TGCCACCGAGACTGACTTCAGGAC.....................................................................................................2414.004400000
...................................................................................................................TGTTCCATCTACGAAGCCACGGGTC...................2543.5014532130
.............................TAAAATGCCACCGAGACTGACTTCAGG.......................................................................................................2713.003120000
...................................................................................................................TGTTCCATCTACGAAGCCACGGG.....................2343.0012920010
...................................................................................................................TGTTCCATCTACGAAGCCACGGGTCA..................2623.006500010
..................................TGCCACCGAGACTGACTTCAGGACA....................................................................................................2513.003300000
.................................................................................................................AATGTTCCATCTACGAAGCCACGGG.....................2542.5010730000
...TATTTGACAGTTGGGCTTGCAGGTAT..................................................................................................................................2622.004400000
...TATTTGACAGTTGGGCTTGCAGG.....................................................................................................................................2322.004210010
..................................................TTCAGGACAGTCGCCTCTCCTTAGGG...................................................................................2612.002200000
.....................................................................................................................TTCCATCTACGAAGCCACGGGTCAA--------G........2622.004400000
..................................TGCCACCGAGACTGACTTCAG........................................................................................................2112.002200000
...................................................................................................................TGTTCCATCTACGAAGCCACGGGTCAA--------.........2721.503300000
...................................................................................................................TGTTCCATCTACGAAGCCACGGGTCAA--------G........2821.503300000
...........................................................................................................GACGGCAATGTTCCATCTACGAAGC...........................2541.506330000
.....................................................................................................................TTCCATCTACGAAGCCACGGGTCAA--------.........2521.503200010
...TATTTGACAGTTGGGCTTGCAG......................................................................................................................................2221.503100020
.....................................................................................TCTGGGCTGATTTGTCGTGGTTGA..................................................2471.299201042
............................................................................TAAAAGTCATCTGGGCTGATTTGTCGT........................................................2781.25100000100
..............................................TGACTTCAGGACAGTCGCCTCTCCTT.......................................................................................2611.001100000
...TATTTGACAGTTGGGCTTGCA.......................................................................................................................................2121.002100010
....................TGCAGGTATTAAAATGCCACCGAGACT................................................................................................................2721.002020000
...............................................GACTTCAGGACAGTCGCCTCTCC.........................................................................................2311.001100000
.........................................................................................................TTGACGGCAATGTTCCATCTACGAAGC...........................2741.004130000
...................................GCCACCGAGACTGACTTCAGGACAG...................................................................................................2511.001100000
.....................................CACCGAGACTGACTTCAGGACAGT..................................................................................................2411.001100000
..................................TGCCACCGAGACTGACTTCAGGACAG...................................................................................................2611.001100000
..................................................TTCAGGACAGTCGCCTCTCCTTAGGGT..................................................................................2711.001000010
................................AATGCCACCGAGACTGACTTCAGG.......................................................................................................2411.001100000
..........................TATTAAAATGCCACCGAGACTGACTTCA.........................................................................................................2811.001000010
...............................AAATGCCACCGAGACTGACTTCAGGAC.....................................................................................................2711.001100000
..........................TATTAAAATGCCACCGAGACTGACTT...........................................................................................................2611.001100000
...............................................GACTTCAGGACAGTCGCCTCTCCT........................................................................................2411.001100000
...............................AAATGCCACCGAGACTGACTTCAGGACA....................................................................................................2811.001100000
......................................................................................................................TCCATCTACGAAGCCACGGGTCAA--------G........2521.002200000
..............................................TGACTTCAGGACAGTCGCCTCTCCTTA......................................................................................2711.001100000
.............................TAAAATGCCACCGAGACTGACTTCAGGA......................................................................................................2811.001100000
..................................................TTCAGGACAGTCGCCTCTCCTTAG.....................................................................................2411.001100000
.............................TAAAATGCCACCGAGACTGACTTCAGGAC.....................................................................................................2911.001100000
............................................................................TAAAAGTCATCTGGGCTGATTTGTCG.........................................................2680.887200050
.....................................................................................TCTGGGCTGATTTGTCGTGGTTGACGG...............................................2770.866410010
...................................................................TCCTTAGGGTAAAAGTCATCTGGGC...................................................................2560.835002030
.................................................................................................................AATGTTCCATCTACGAAGCCACGG......................2440.753100020
.......................................................................................TGGGCTGATTTGTCGTGGTTGACG................................................2470.715000041
.......................................................................................TGGGCTGATTTGTCGTGGTTGACGG...............................................2570.574100030
.....TTTGACAGTTGGGCTTGCAGGTATT.................................................................................................................................2520.501100000
...TATTTGACAGTTGGGCTTGCAA......................................................................................................................................2220.501100000
..........................TATTAAAATGCCACCGAGACTGAC.............................................................................................................2420.501100000
.....................GCAGGTATTAAAATGCCACCGAGACT................................................................................................................2620.501000010
..........................................................................................................TGACGGCAATGTTCCATCTACGAAGC...........................2640.502200000
................................................................................................................CAATGTTCCATCTACGAAGCCACGGG.....................2640.502200000
AGATATTTGACAGTTGGGCTTGCAG......................................................................................................................................2520.501000010
..........................................................................................................................TCTACGAAGCCACGGGTCAA--------GAATA....2520.501100000
......TTGACAGTTGGGCTTGCA.......................................................................................................................................1820.501100000
....................TGCAGGTATTAAAATGCCACCGAGAC.................................................................................................................2620.501010000
.GATATTTGACAGTTGGGCTTGCAGGTA...................................................................................................................................2720.501100000
........................................................................................................................CATCTACGAAGCCACGGGTCAA--------GAATA....2720.501100000
......TTGACAGTTGGGCTTGCAGG.....................................................................................................................................2020.501100000
...................................................................................................................TGTTCCATCTACGAAGCCACGGGTCAA--------T........2820.501100000
....................................................................................................................GTTCCATCTACGAAGCCACGGG.....................2240.502200000
...................................................................................................................TGTTCCATCTACGAAGCCACGG......................2240.502000020
....................TGCAGGTATTAAAATGCCACCGAGACC................................................................................................................2720.501010000
......................................................................................................................TCCATCTACGAAGCCACGGGTCAA--------.........2420.501100000
................................................................................................................CAATGTTCCATCTACGAAGCCACGG......................2540.502200000
...TATTTGACAGTTGGGCTTGCAGGTATC.................................................................................................................................2720.501010000
.....................................................................................................................TTCCATCTACGAAGCCACGGGTCA..................2420.501100000
.....................GCAGGTATTAAAATGCCACCGAGAC.................................................................................................................2520.501010000
.................................................................TCTCCTTAGGGTAAAAGTCATCTGGGC...................................................................2760.332010010
.................................................................TCTCCTTAGGGTAAAAGTCATCTGG.....................................................................2560.332110000
.................................................................................GTCATCTGGGCTGATTTGTCGTGGTT....................................................2670.292100010
...............................................................................AAGTCATCTGGGCTGATTTGTCGTGGT.....................................................2770.292110000
.......................................................................................TGGGCTGATTTGTCGTGGTTGACT................................................2470.292000020
.....................................................................................TCTGGGCTGATTTGTCGTGGTTGACGGC..............................................2870.292100010
...........................................................................................................GACGGCAATGTTCCATCTACGAAG............................2440.251010000
AGATATTTGACAGTTGGGCTTG.........................................................................................................................................2240.251100000
.......................................................GACAGTCGCCTCTCCTTAGGGTAAAAGT............................................................................2840.251100000
..................................................................................................................ATGTTCCATCTACGAAGCCACGGGT....................2540.251010000
..........................................................................................................TGACGGCAATGTTCCATCTACGAAG............................2540.251010000
............................................................TCGCCTCTCCTTAGGGTAAAAGTCATCA.......................................................................2840.251100000
.GATATTTGACAGTTGGGCT...........................................................................................................................................1940.251000001
...................................................................................................TCGTGGTTGACGGCAATGTTCCATCTAC................................2840.251100000
......................................................................................................................TCCATCTACGAAGCCACGGGTC...................2240.251100000
...................................................................................................................TGTTCCATCTACGAAGCCACG.......................2140.251000001
..........................................................................................................TGACGGCAATGTTCCATCTACGAAGCC..........................2740.251000010
............................................................................TAAAAGTCATCTGGGCTGATTTGTCGTG.......................................................2880.252100010
.........................................................................................................TTGACGGCAATGTTCCATCTACG...............................2340.251000100
.................................................................................................................AATGTTCCATCTACGAAGCCACGGGT....................2640.251010000
.................................................................................................................AATGTTCCATCTACGAAGCCACGGGTC...................2740.251100000
...TATTTGACAGTTGGGCTTGC........................................................................................................................................2040.251000010
AGATATTTGACAGTTGGGCTTGC........................................................................................................................................2340.251010000
................................................................................................................CAATGTTCCATCTACGAAGCCAC........................2340.251100000
...........................................................................................................GACGGCAATGTTCCATCTACGAAGCC..........................2640.251010000
................................................................................................................CAATGTTCCATCTACGAAGCCACGGGAT...................2840.251100000
...................................................................................................................TGTTCCATCTACGAAGCCACGGGG....................2440.251100000
.........................................................................................................TTGACGGCAATGTTCCATCTAC................................2240.251010000
...............................................................................AAGTCATCTGGGCTGATTTGTCGT........................................................2480.252100010
............................................................................TAAAAGTCATCTGGGCTGATTTGTC..........................................................2580.252000011
.......................................................GACAGTCGCCTCTCCTTAGGGTAAAA..............................................................................2640.251000001
...............................................................CCTCTCCTTAGGGTAAAAGTCATCTGGGC...................................................................2950.201100000
...................................................................TCCTTAGGGTAAAAGTCATCTGG.....................................................................2360.171100000
....................................................................CCTTAGGGTAAAAGTCATCTGGGC...................................................................2460.171100000
...................................................................TCCTTAGGGTAAAAGTCATCTGGGCT..................................................................2660.171010000
.................................................................TCTCCTTAGGGTAAAAGTCATCTGGGCT..................................................................2860.171100000
..........................................................................................GCTGATTTGTCGTGGTTGACG................................................2170.141000010
.....................................................................................TCTGGGCTGATTTGTCGTGGT.....................................................2170.141010000
............................................................................................TGATTTGTCGTGGTTGACGGCAAT...........................................2470.141000010
........................................................................................GGGCTGATTTGTCGTGGTTGACGGC..............................................2570.141100000
.......................................................................................TGGGCTGATTTGTCGTGGTTGA..................................................2270.141000010
.......................................................................................TGGGCTGATTTGTCGTGGTTGACGGA..............................................2670.141000010
.....................................................................................TCTGGGCTGATTTGTCGTGG......................................................2070.141000001
......................................................................................CTGGGCTGATTTGTCGTGGTTGA..................................................2370.141100000
.......................................................................................TGGGCTGATTTGTCGTGGTTGACGGC..............................................2670.141000010
.........................................................................................GGCTGATTTGTCGTGGTTGACGG...............................................2370.141000010
.................................................................................GTCATCTGGGCTGATTTGTCGTGG......................................................2470.141001000
..................................................................................TCATCTGGGCTGATTTGTCGTGGT.....................................................2470.141000010
..................................................................................TCATCTGGGCTGATTTGTCGTGGC.....................................................2470.141010000
.......................................................................................TGGGCTGATTTGTCGTGGTTGAC.................................................2370.141000010
..........................................................................................GCTGATTTGTCGTGGTTGACGGC..............................................2370.141000010
...................................................................................CATCTGGGCTGATTTGTCGTGG......................................................2270.141100000
.............................................................................AAAAGTCATCTGGGCTGATTTGTCGG........................................................2680.131001000
.............................................................................AAAAGTCATCTGGGCTGATTTGTCG.........................................................2580.131000010
............................................................................TAAAAGTCATCTGGGCTGATTTGT...........................................................2480.131000010
.............................................................................AAAAGTCATCTGGGCTGATTTGTCGTG.......................................................2780.131000010
............................................................................TAAAAGTCATCTGGGCTGATT..............................................................2180.131010000
.................................................................................GTCATCTGGGCTGATTTGTCGTG.......................................................2380.131001000
...............................................................................AAGTCATCTGGGCTGATTTGTCG.........................................................2380.131000010
............................................................................TAAAAGTCATCTGGGCTGATTTG............................................................2380.131000010
...............................................................................AAGTCATCTGGGCTGATTTGTCGTG.......................................................2580.131000010
droBip1
AGATATTTGGGTGTAGGGCTTGCTGGAATTGGAGTGCCTCCGAGACTGACTTCAGGACAGTCGCCTCTCCTCATTGTAAAAGTCGTTTGGGCTGATTTTTCGTGGTTGACGGCAATGTTCCACCTTCGAAGCCACGGATCAA--------GGATGTCCASizeHit CountTotal NormTotal
No Reads
droKik1
AGATACTTCACACAGGTATCTTGTGGAATTGCTGAACCGTTCAGTGTGACATTTGGGCAGTTTCCTGGTCTTAGTGCAAATGTTATTTGGACAGATTTC-GAGAGTTGATTTTAATTTTCCAGCGAAGAAACCAGGCTTCAA--------TCAGATTGASizeHit CountTotal NormTotal
No Reads
droFic1
AGGTATTTCGGGTTTGGATCATCCGGGATGACAACTCCATTGAGGGTGACTGGCGGGCAGTTACCTTGTCGTAGAGTGAAGGTGGTCTGGGTGGATTTGTCCTCGTTGACGGTGATGTTCCAGCTCCGTAGGCAGGGTTCAA--------TAGCATCCASizeHit CountTotal NormTotal
No Reads
droEle1
AGATACTTCACACAGGTATCTTATGGAATTTCTGAGCCGTTAAGGGTGACATTTGGGCAGTTTCCTGGTCTTAGTGCAAAAGGTATTTGGACAGACTTCAGGGAGTTGATTTTAATTTTCCAGCGAAGGAACCAGGCTTCAA--------TCAGACTGASizeHit CountTotal NormTotal
No Reads
droRho1
AGGTATTTAACACTTTCGCATTCTGGGATGTTCACGCCACCCAGTATCACCGGAGGACATTTATCTTTTCTTAAGGCAAATGTTATTTGTATTGACTTTTGAGTGTTGACAACTATCTTCCATCTGTTTAGCCAGTTTTCTA--------TTAAATGGASizeHit CountTotal NormTotal
No Reads
droBia1
AGGTACGTTACAACGTCAGCTTGTGGAAGTGGCGTGTTATTTAGAGTTAGCGGGGGACACGTTTGTCTGTTAAGAGTAAACGATATGTGCTTACACTTTTGCCCATTTATTTTTATACGCCAGTCTGATAACCACCTCTCCACCACCACAAGATGATCASizeHit CountTotal NormTotal
No Reads
droTak1
AGATATTTGGCCGTCGTCTGCTGCGGGATAGGTGCGCCGTTTATTGAGACCGCCGGGGAGATTCCTGGCCTCAGCGTAAAAGTAGTATGTGTAGATTTCTCAGCATTTATGACGACGTTCTACCTCTTCAACCATGGCTCTA--------AGTTGTCAASizeHit CountTotal NormTotal
No Reads
droEug1
AGGTATTTGGGGGTCGGGTCGTTAGGGGTAATACTACCTCCGAGGCTGAC-GGAGGACAATCACCATACCGTAACGG-AAAGTAGTTTGCGTTGACTGCTCGGGGTTGACTTTTATATTCCACCTTCGAATCCAGGGGTGAA--------GGATGTCCASizeHit CountTotal NormTotal
No Reads
dm3
AAGTATTTCGGCATTGGTTCAACGGGTATAGAGACTCCATTTAGGGAGACAGGCGGGCAGTCTCCTCTACTCAAAGAGAAAGTAGACTGTGTGGATTTGTCCTCATTGACGGTAATATTCCATCTGCGCAACCAAGGCTCGA--------TAGTATCCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...TATTTCGGCATTGGTTCAACGGG.....................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................TAGACTGTGTGGATTTGTCCTCATT....................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...TATTTCGGCATTGGTTCAACGGGT....................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....TTTCGGCATTGGTTCAACGG......................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AAGAGAAAGTAGACTGTGTGG.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....TTTCGGCATTGGTTCAACGGGTAT..................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TGGATTTGTCCTCATTGACGGTAATATT........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTGGTTCAACGGGTATAGA...............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TCCATTTAGGGAGACAGGCGGGCA....................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................GAGACTCCATTTAGGGAGACAGGC.........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................TCAACGGGTATAGAGACTCCATTTAGG..................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TATAGAGACTCCATTTAGGGAGACA............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................TTCAACGGGTATAGAGACTCCATTTA....................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................TCCATTTAGGGAGACAGGCGGGCAGTC.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................ATTCCATCTGCGCAACCAAGG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTATTTCGGCATTGGTTCAACGGG.....................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTTCGGCATTGGTTCAACGGGT....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TCCATCTGCGCAACCAAGGCTCGA--------TAG......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGTATTTCGGCATTGGTTCAACGGG.....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................ACTCCATTTAGGGAGACAGGCGC.......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................TCCATTTAGGGAGACAGGCGGGCAGT..................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................ATATTCCATCTGCGCAACCAAGGCT....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAACGGGTATAGAGACTCCATTTAGGG.................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TATTCCATCTGCGCAACCAAGGCTC...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GACTCCATTTAGGGAGACAGGCGGGC.....................................................................................................2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTTAGGGAGACAGGCGGGCAGTCTCC..............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AACGGGTATAGAGACTCCATTTAGG..................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TAGAGACTCCATTTAGGGAGACAGGT.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TACTCAAAGAGAAAGTAG..........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ACTCAAAGAGAAAGTAGACTGTG....................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGGTATTTGGGGGTGCTGGTAGTAGGGATCGTGTCGCCGTCAAGAGTAACCGGAGGGCATTCTCCTCTGCGCAGGGAAAATGTTGTGTGGGAGGATTTTTCGGCATTGACCGTAATATTCCATCGTTTCAGCCATGGATTCA--------GAGCATCCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................TGTTGTGTGGGAGGATTTTTCGGC.......................................................2421106.50221300432402908211041265451924523000
................................................................................TGTTGTGTGGGAGGATTTTTCGGCA......................................................252952.00190400043043028721761642531827000
................................................................................TGTTGTGTGGGAGGATTTTTCGGCAT.....................................................262700.0014000011900136455114115237030815000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGCA....252320.5064101246444267412533612160000
................................................................................TGTTGTGTGGGAGGATTTTTCGG........................................................232218.5043700060012643728105416021000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGC.....242163.503270072716017613147119200000
.........................................AAGAGTAACCGGAGGGCATTCTCCTC............................................................................................261120.001200000000000118020000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGCATC..272116.50233004104095014261010150000
............................TCGTGTCGCCGTCAAGAGTAACCGGA.........................................................................................................262103.502070000009801965190150000
............................TCGTGTCGCCGTCAAGAGTAACCGG..........................................................................................................25296.001920003006571654371180000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GA.......22295.5019100011641648154843000000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGCAT...26288.0017600000016392063240131000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAG......23281.0016200048044420117001000
................TGGTAGTAGGGATCGTGTCGCCGTC......................................................................................................................25280.50161000200084151080231000
................................................................................TGTTGTGTGGGAGGATTTTTCGGCATT....................................................27252.50105000300144872140170000
................................................................................TGTTGTGTGGGAGGATTTTTCG.........................................................22247.509500232803406260221000
.............TGCTGGTAGTAGGGATCGTGTCGC..........................................................................................................................24239.5079000100121760583000
................................................................................TGTTGTGTGGGAGGATTTTTCGGT.......................................................24237.00740000003602603522000
................TGGTAGTAGGGATCGTGTCGCCGTCA.....................................................................................................................26234.50690000000319240311000
................................................................................TGTTGTGTGGGAGGATTTTTCGGCAA.....................................................26234.006800000011136100370000
................................................................................TGTTGTGTGGGAGGATTTTTC..........................................................21232.006400001200100284154000
................TGGTAGTAGGGATCGTGTCGCCGT.......................................................................................................................24229.50590001001007270212000
.............TGCTGGTAGTAGGGATCGTGTCGCC.........................................................................................................................25225.0050000100011080381000
.............TGCTGGTAGTAGGGATCGTGTCGCCGT.......................................................................................................................27223.0046000000090440290000
................................................................................TGTTGTGTGGGAGGATTTTT...........................................................20222.00440000401000901317000
............................TCGTGTCGCCGTCAAGAGTAACC............................................................................................................23221.50430000000233134000000
................................................................................TGTTGTGTGGGAGGATTTTTCGGCT......................................................25221.00420001003122130128000
.............TGCTGGTAGTAGGGATCGTGTCGCA.........................................................................................................................25219.0038000000000000371000
.......................................................................................TGGGAGGATTTTTCGGCATTGACCGTA.............................................27218.5037000000320490010000
..............................................................TCCTCTGCGCAGGGAAAATGTTGTG........................................................................25117.0017000000000012050000
................TGGTAGTAGGGATCGTGTCGCCG........................................................................................................................23216.5033000140100311202000
................................................................CTCTGCGCAGGGAAAA...............................................................................16116.0016000000000016000000
................TGGTAGTAGGGATCGTGTCGCCGTCAA....................................................................................................................27216.0032000000000120290000
..........................................................................................................................TCGTTTCAGCCATGGATTC..................19216.0032000024000008000000
................................................................................TGTTGTGTGGGAGGATT..............................................................17215.5031000000010029001000
.....................................CGTCAAGAGTAACCGGAGGGCATT..................................................................................................24215.0030000000416520030000
..................................CGCCGTCAAGAGTAACCGGAGGGCA....................................................................................................25215.0030000000333109020000
.............TGCTGGTAGTAGGGATCGTGTCGCCG........................................................................................................................26214.5029000100022150180000
............................TCGTGTCGCCGTCAAGAGTAACCGGAG........................................................................................................27213.50270000001111210110000
...........................ATCGTGTCGCCGTCAAGAGTAACCGG..........................................................................................................26212.5025000000120060160000
..........................................................................................................................TCGTTTCAGCCATGGATT...................18212.5025000080000017000000
...................................................................................TGTGTGGGAGGATTTTTCGGCATT....................................................24212.0024000000003110118000
.....................................................................................TGTGGGAGGATTTTTCGGCATTGAC.................................................25211.5023000000002410160000
.....................................................AGGGCATTCTCCTCTGCGCAGGGA..................................................................................24111.001100000017011010000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------.........20211.0022000016400002000000
................................................................................TGTTGTGTGGGAGGA................................................................15210.5021000000040017000000
...................TAGTAGGGATCGTGTCGCCGTCAAGA..................................................................................................................2629.501900000008073010000
................................................................................TGTTGTGTGGGAGGATTTTTCGGA.......................................................2429.5019000000001000126000
................................................................................TGTTGTGTGGGAGGATTTT............................................................1929.001800008000006013000
...................................................................................TGTGTGGGAGGATTTTTCGGCAT.....................................................2329.001800000000015066000
................TGGTAGTAGGGATCGTGTCGCC.........................................................................................................................2229.0018000000000160101000
.......TGGGGGTGCTGGTAGTAGGGATCGTG..............................................................................................................................2628.5017000000020100122000
.......................AGGGATCGTGTCGCCGTCAAGAGTAAC.............................................................................................................2728.501700000026251010000
.......................AGGGATCGTGTCGCCGTCAAGAGTAACC............................................................................................................2828.501700000026720000000
.............TGCTGGTAGTAGGGATCGTGTCG...........................................................................................................................2328.0016000000000000160000
..........................................AGAGTAACCGGAGGGCATTCTCCTC............................................................................................2518.00800000000008000000
................................................................................TGTTGTGTGGGAGGATTT.............................................................1828.0016000000010013002000
................................................................................TGTTGTGTGGGAGGATTTTTCGGAT......................................................2528.001600000000000088000
..............................................................................AATGTTGTGTGGGAGGATTTTTCGGC.......................................................2627.5015000000000010140000
......................................................................................GTGGGAGGATTTTTCGGC.......................................................1827.5015000000000015000000
...................................................................TGCGCAGGGAAAATGTTGTGTGGGA...................................................................2527.501500000003543000000
..........................................................................................................TGACCGTAATATTCCATCGTTTCAGC...........................2627.501500000011670000000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------G........2127.001400008000006000000
.............TGCTGGTAGTAGGGATCGTGTC............................................................................................................................2227.0014000000010020110000
.................................................................TCTGCGCAGGGAAAATGTTGTGTGGGA...................................................................2717.00700000010042000000
.............................................................CTCCTCTGCGCAGGGAAAATGTTGTG........................................................................2617.00700000001006000000
................TGGTAGTAGGGATCGTGTCGC..........................................................................................................................2127.001400000001003082000
.......................AGGGATCGTGTCGCCGTCAAGAGTA...............................................................................................................2527.001400000025321010000
................................................................................TGTTGTGTGGGAGGATTTTTCGGTT......................................................2527.001400000000020093000
.................................................................................GTTGTGTGGGAGGATTTTTCGGCAT.....................................................2526.501300000031302022000
...........................................................................................................GACCGTAATATTCCATCGTTTCAGCCA.........................2726.501300000013142011000
..........................................................................................................................TCGTTTCAGCCATGGAT....................1726.5013000000010012000000
.....................................................AGGGCATTCTCCTCTGCGCAGGGAAAA...............................................................................2716.00600010000000050000
...........................................................TTCTCCTCTGCGCAGGGAAAATGTTG..........................................................................2616.00600000000006000000
............................TCGTGTCGCCGTCAAGAGTAACCGGAA........................................................................................................2726.001200000001002081000
.................................TCGCCGTCAAGAGTAACCGGAGGGCA....................................................................................................2626.001200010011013050000
..........................................................................................................................TCGTTTCAGCCATGGA.....................1626.001200000001155000000
.......................................................................................TGGGAGGATTTTTCGGCATTGACC................................................2426.001200000003120060000
......................................................................................GTGGGAGGATTTTTCGGCAT.....................................................2026.0012000000000010002000
................................................................................TGTTGTGTGGGAGGAT...............................................................1626.0012000000001011000000
......................TAGGGATCGTGTCGCCGTCAAGAGT................................................................................................................2525.501100010003222010000
...................................................................................TGTGTGGGAGGATTTTTCGGCA......................................................2225.501100000002005004000
.......TGGGGGTGCTGGTAGTAGGGATCGT...............................................................................................................................2525.501100000001110053000
......................TAGGGATCGTGTCGCCGTCAAGAGTA...............................................................................................................2625.501100000013151000000
............................TCGTGTCGCCGTCAAGAGTAAC.............................................................................................................2225.001000000005211010000
...................................................................................TGTGTGGGAGGATTTTTCGGCATTGAC.................................................2725.001000000010111060000
...........................................GAGTAACCGGAGGGCATTCTCCTC............................................................................................2415.00500000000005000000
.......................................................................................TGGGAGGATTTTTCGGCA......................................................1825.0010000000000010000000
.....................................................................................TGTGGGAGGATTTTTCGGCATTGACC................................................2625.001000000011010070000
.......................................TCAAGAGTAACCGGAGGGCATTCTCCTC............................................................................................2815.00500000000005000000
..............................................................................................................CGTAATATTCCATCGTTTCAGCCATGGA.....................2825.001000000024220000000
.............TGCTGGTAGTAGGGATCGTGT.............................................................................................................................2124.50900000001002060000
..................................................................................................................................GCCATGGATTCA--------GAGCA....1724.50900000000009000000
...........................................................................................................GACCGTAATATTCCATCGTTTCAGC...........................2524.50900000011160000000
..............................GTGTCGCCGTCAAGAGTAACCGGA.........................................................................................................2424.50900000007002000000
................................................................................TGTTGTGTGGGAGGATTTTTCGT........................................................2324.50900000000005040000
............................TCGTGTCGCCGTCAAGAGTAACCG...........................................................................................................2424.50900000003042000000
..............GCTGGTAGTAGGGATCGTGTCGC..........................................................................................................................2324.00800000000101060000
.............TGCTGGTAGTAGGGATC.................................................................................................................................1724.00800000000008000000
............................TCGTGTCGCCGTCAAGAGTAACCGGAGG.......................................................................................................2824.00800000005120000000
.............TGCTGGTAGTAGGGATCGTGTCGCCGTC......................................................................................................................2824.00800000002010041000
...................TAGTAGGGATCGTGTCGCCGTCAAGAG.................................................................................................................2724.00800000013030010000
..................................................................................TTGTGTGGGAGGATTTTTCGGCAT.....................................................2424.00800000000112040000
...................TAGTAGGGATCGTGTCGCCGTCAAG...................................................................................................................2524.00800000011012030000
...........................................................................................................................CGTTTCAGCCATGGATTCA--------GAGCA....2424.00800020020220000000
.............TGCTGGTAGTAGGGATCGTGTCGCAA........................................................................................................................2624.00800000000000062000
..............................................................TCCTCTGCGCAGGGAAAATGTTGTGTG......................................................................2714.00400000000004000000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGA.....2424.00800000013102010000
.......................AGGGATCGTGTCGCCGTC......................................................................................................................1823.50700000000007000000
...................TAGTAGGGATCGTGTCGCCGTCAAGAGT................................................................................................................2823.50700000003310000000
.........................................AAGAGTAACCGGAGGGCATTCTCC..............................................................................................2423.50700000000006010000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGCAA...2623.50700000000011050000
......................................................................................GTGGGAGGATTTTTCGGCA......................................................1923.50700000000015001000
................................................................................TGTTGTGTGGGAGGATTTTTA..........................................................2123.50700000000000061000
.............TGCTGGTAGTAGGGATCGTGTCA...........................................................................................................................2323.50700000000000061000
................TGGTAGTAGGGATCGT...............................................................................................................................1623.50700000000007000000
..................................CGCCGTCAAGAGTAACCGGAGGGCATT..................................................................................................2723.50700000000005020000
.................................................................................GTTGTGTGGGAGGATTTTTCGGCATT....................................................2623.50700010000000042000
...................................................................................TGTGTGGGAGGATTTTTCGGCATTG...................................................2523.00600000000001023000
................TGGTAGTAGGGATCGTGTC............................................................................................................................1923.00600000000006000000
...............................TGTCGCCGTCAAGAGTAACCGGAGG.......................................................................................................2523.00600000000105000000
..............GCTGGTAGTAGGGATCGTGTCGCCG........................................................................................................................2523.00600000000201120000
..................................................................................TTGTGTGGGAGGATTTTTCGGCA......................................................2323.00600000011202000000
.........................................AAGAGTAACCGGAGGGCATTCTCCTCT...........................................................................................2713.00300000000002010000
.......................AGGGATCGTGTCGCCGTCAAGAGT................................................................................................................2423.00600000012101010000
.....................................................................................TGTGGGAGGATTTTTCGGCATTGACCG...............................................2723.00600000000000060000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGCATCC.2823.00600100021101000000
..............................................................................AATGTTGTGTGGGAGGATTTTTC..........................................................2323.00600000000002040000
........................................CAAGAGTAACCGGAGGGCATTCTCCTC............................................................................................2713.00300000000001020000
..............................................................................AATGTTGTGTGGGAGGATTTTT...........................................................2223.00600000000000042000
................TGGTAGTAGGGATCGTGTCGCAA........................................................................................................................2323.00600000000000051000
................................................ACCGGAGGGCATTCTCCTCTGCGCAGGGA..................................................................................2913.00300000003000000000
..............................................................TCCTCTGCGCAGGGAAAATGTTGTGTA......................................................................2713.00300000002010000000
................................................................................TGTTGTGTGGGAGGATTTTTCGGCAAA....................................................2723.00600000003010020000
............GTGCTGGTAGTAGGGA...................................................................................................................................1623.00600000005001000000
................TGGTAGTAGGGATCGTGTCGT..........................................................................................................................2123.00600000000001050000
...............................................................................................................................TCAGCCATGGATTCA--------GAG......1823.00600000000006000000
...................................................................................TGTGTGGGAGGATTTTTCGGC.......................................................2122.50500000000005000000
........................................................................................................ATTGACCGTAATATTCCATCGTTTC..............................2522.50500004000001000000
.......TGGGGGTGCTGGTAGTAGGGATCGTC..............................................................................................................................2622.50500000001000040000
.....TTTGGGGGTGCTGGTAGTAGGGA...................................................................................................................................2322.50500000002002010000
..............................................................................AATGTTGTGTGGGAGGATTTTTCGG........................................................2522.50500000000000050000
....................AGTAGGGATCGTGTCGCCGTCAAGA..................................................................................................................2522.50500000001040000000
..............................................................................................................CGTAATATTCCATCGTTTCAGCCATG.......................2622.50500500000000000000
.......TGGGGGTGCTGGTAGTAGGGA...................................................................................................................................2122.50500000001010012000
.....................................................................................TGTGGGAGGATTTTTCGGCATTGACAA...............................................2722.50500000000000050000
.............TGCTGGTAGTAGGGATCGTGTCGAA.........................................................................................................................2522.50500000000000050000
...........................................................................................................................CGTTTCAGCCATGGATTCA--------GAGCATC..2622.50500000004000010000
.....................................................................................................................................ATGGATTCA--------GAGCATC..1622.50500000000005000000
......................................................................................GTGGGAGGATTTTTCGGCATTGAC.................................................2422.50500000000000023000
.......................................................................................TGGGAGGATTTTTCGGCATTGACCG...............................................2522.50500000001010030000
.................................................................................................................................AGCCATGGATTCA--------GAGCA....1822.50500000000014000000
...................................................................................TGTGTGGGAGGATTTTTCGGCATTGA..................................................2622.50500000000000032000
...............................TGTCGCCGTCAAGAGTAACCGGAG........................................................................................................2422.50500000013001000000
......................TAGGGATCGTGTCGCCGTCAAGAGTAAC.............................................................................................................2822.50500000001121000000
...........................ATCGTGTCGCCGTCAAGAGTAACCGGA.........................................................................................................2722.50500000000111020000
...........................ATCGTGTCGCCGTCAAGAGTAA..............................................................................................................2222.50500000000000050000
.........................................AAGAGTAACCGGAGGGCATTCTC...............................................................................................2322.50500000000002012000
................TGGTAGTAGGGATCGTGTCG...........................................................................................................................2022.50500000000003011000
.....................................................................................TGTGGGAGGATTTTTCGGC.......................................................1922.50500000010004000000
..............................................................................................................CGTAATATTCCATCGTTTCAGCCAT........................2522.50500000011002010000
....................................................................................................................................CATGGATTCA--------GAGCA....1522.50500000000005000000
.................................................................................GTTGTGTGGGAGGATTTTTCGGCA......................................................2422.50500010012000010000
........................................................................................GGGAGGATTTTTCGGCAT.....................................................1822.50500000000005000000
............................TCGTGTCGCCGTCAAGAGTAA..............................................................................................................2122.00400000004000000000
...................TAGTAGGGATCGTGTCGCCGTC......................................................................................................................2222.00400000001021000000
..................................................CGGAGGGCATTCTCCTCTGCGCAGGG...................................................................................2612.00200000000101000000
..................................CGCCGTCAAGAGTAACCGGAGGGCAT...................................................................................................2622.00400000000001021000
.....................................................AGGGCATTCTCCTCTGCGCAGGGAAAAA..............................................................................2812.00200000000000020000
...............CTGGTAGTAGGGATCGTGTCGCCGTC......................................................................................................................2622.00400000002010010000
................................................................CTCTGCGCAGGGAAAATGTTGTGTG......................................................................2512.00200000010001000000
..............GCTGGTAGTAGGGATCGTGTCGCCGTC......................................................................................................................2722.00400000000201010000
....................AGTAGGGATCGTGTCGCCGTCAAGAGT................................................................................................................2722.00400000002002000000
..............................................................................................................................TTCAGCCATGGATTCA--------GAGC.....2022.00400000000004000000
................TGGTAGTAGGGATCGTGT.............................................................................................................................1822.00400000000003010000
.................................................................................GTTGTGTGGGAGGATTTTTCGGC.......................................................2322.00400100000001011000
..................................................................................................................................GCCATGGATTCA--------GAGCATC..1922.00400000000004000000
.......TGGGGGTGCTGGTAGTAGGG....................................................................................................................................2022.00400000002010010000
....................AGTAGGGATCGTGTCGCCGTCAAGAGTA...............................................................................................................2822.00400000012010000000
.......................................................................................TGGGAGGATTTTTCGGC.......................................................1722.00400000000004000000
..............GCTGGTAGTAGGGATCGTGTCGCCGT.......................................................................................................................2622.00400000010000030000
..............GCTGGTAGTAGGGATCGTGTCGCC.........................................................................................................................2422.00400000001012000000
..................................CGCCGTCAAGAGTAACCGGA.........................................................................................................2022.00400000000004000000
................................................................................................................................CAGCCATGGATTCA--------GAG......1722.00400000000004000000
.................................................................TCTGCGCAGGGAAAATGTTGTGTG......................................................................2412.00200000000101000000
..................................................................................................................................GCCATGGATTCA--------GAG......1522.00400000000004000000
.............TGCTGGTAGTAGGGATCGTGTCGA..........................................................................................................................2422.00400000000000031000
.................................TCGCCGTCAAGAGTAACCGGA.........................................................................................................2122.00400000001021000000
.................................................................TCTGCGCAGGGAAAATGTTGTGTGGG....................................................................2612.00200000000002000000
......................................................................................GTGGGAGGATTTTTCGGCATTG...................................................2222.00400000000000004000
................................................................................TGTTGTGTGGGAGGATTTTTCGGCATA....................................................2722.00400000012010000000
............................TCGTGTCGCCGTCAAGAGTAACCGGAGGG......................................................................................................2922.00400000013000000000
................................................................................TGTTGTGTGGGAGGATTTTTCGA........................................................2322.00400000020000011000
.............................................................CTCCTCTGCGCAGGGAAAATGTTGTGA.......................................................................2712.00200000002000000000
................................GTCGCCGTCAAGAGTAACCGG..........................................................................................................2122.00400000000013000000
...........................................................TTCTCCTCTGCGCAGGGA..................................................................................1812.00200000000002000000
...............................TGTCGCCGTCAAGAGTAACCGGA.........................................................................................................2322.00400000001012000000
............................................................................................................................GTTTCAGCCATGGATTCA--------GAG......2122.00400000000004000000
................................................................................TGTTGTGTGGGAGGATTTTTCGGG.......................................................2422.00400000000001210000
................................................................................TGTTGTGTGGGAGGATTTTTCGTT.......................................................2422.00400000000010021000
..............................................................TCCTCTGCGCAGGGAAAATGTTGTGTGGGA...................................................................3012.00200000002000000000
.................................TCGCCGTCAAGAGTAACCGGAGGGC.....................................................................................................2522.00400000000004000000
...............................................................................................................................TCAGCCATGGATTCA--------GAGCA....2022.00400000000004000000
.....................................................AGGGCATTCTCCTCTGCGCAGGGAAA................................................................................2612.00200000000001010000
..................................................CGGAGGGCATTCTCCTCTGCGCAGGGA..................................................................................2712.00200000010001000000
.......................................TCAAGAGTAACCGGAGGGCATTCTCC..............................................................................................2622.00400000000002020000
.....................................................................................TGTGGGAGGATTTTTCGGCATTGACCGTA.............................................2922.00400000002010010000
...........................................................................................................GACCGTAATATTCCATCGTTTCAGCC..........................2622.00400100000110010000
..................................CGCCGTCAAGAGTAACCGGAGGGC.....................................................................................................2422.00400000000013000000
...TATTTGGGGGTGCTGGTAGTAGGGA...................................................................................................................................2522.00400000000101020000
.........................................................................................................TTGACCGTAATATTCCATCGTTTCAGCCA.........................2922.00400010011010000000
.......................AGGGATCGTGTCGCCGTCAAGAGTAA..............................................................................................................2621.50300000000000030000
..............................................................................................................CGTAATATTCCATCGTTTCAGCCATGG......................2721.50300000011010000000
..........................................................................................GAGGATTTTTCGGCA......................................................1521.50300000000003000000
.......................................................................................TGGGAGGATTTTTCGGCAT.....................................................1921.50300000000003000000
............................................................................................................................GTTTCAGCCATGGATTCA--------GAGCA....2321.50300000000102000000
.....................................................................................TGTGGGAGGATTTTTCGGCATTGACA................................................2621.50300000000100020000
.............................................................................AAATGTTGTGTGGGAGGATTTTTC..........................................................2421.50300000000002010000
............................TCGTGTCGCCGTCAAGA..................................................................................................................1721.50300000001002000000
.......................................................................................TGGGAGGATTTTTCGGCATTG...................................................2121.50300000011000010000
................TGGTAGTAGGGATCGTGTCGCCAAA......................................................................................................................2521.50300000000000030000
.....TTTGGGGGTGCTGGTAGTAGGGAT..................................................................................................................................2421.50300000000000012000
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGCG....2521.50300000001002000000
..........................................AGAGTAACCGGAGGGCATTCT................................................................................................2121.50300000000000030000
.............TGCTGGTAGTAGGGATCGTGTCGCCA........................................................................................................................2621.50300000001000020000
......................................................................................................................................TGGATTCA--------GAGCATC..1521.50300000000003000000
............................TCGTGTCGCCGTCAAGAGTAACCGA..........................................................................................................2521.50300000000003000000
............................................................................................................................GTTTCAGCCATGGATTCA--------GAGCATC..2521.50300000000003000000
......................................GTCAAGAGTAACCGGA.........................................................................................................1621.50300000000003000000
.....................................................................................TGTGGGAGGATTTTTCGGCATTGACCT...............................................2721.50300000000000030000
............................TCGTGTCGCCGTCAAGAGTAACCGGT.........................................................................................................2621.50300000000000030000
..................................CGCCGTCAAGAGTAACCGGAGGG......................................................................................................2321.50300000002010000000
...................TAGTAGGGATCGTGTCGCCGTCAA....................................................................................................................2421.50300000000000021000
....................................................................................GTGTGGGAGGATTTTTCGGC.......................................................2021.50300000000003000000
.................GGTAGTAGGGATCGTGTCGCCGTC......................................................................................................................2421.50300010000010010000
..........................................................................................GAGGATTTTTCGGCAT.....................................................1621.50300000001002000000
..............................................................................................................................TTCAGCCATGGATTCA--------GAG......1921.50300000000003000000
..................................................................................TTGTGTGGGAGGATTTTTCGG........................................................2121.50300000000000030000
droSec2
AGGTATTTGGGGGTGCTGGTAGTAGGGATCGTGTCGCCGTCAAGAGTGACCGGAGGGCATTCTCCTCTGCGCAGGGAAAATGTTGTGTGGGAGGATTTTTCGGCGTTGACTGCAATATTCCATCGTTTCAGCCATGGATTCA--------GAGCATCCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............GTGCTGGTAGTAGGGATCGTGT.............................................................................................................................2290.1110100
............................TCGTGTCGCCGTCAAGAGTGA..............................................................................................................21100.1010100
..........................................................................................................................TCGTTTCAGCCATGGATTCA--------GAGC.....24140.0711000
droYak3
AGGTATTTCGGGGAGCTTGAGGATAGGATGGTTTCTCCATTGAGTGTAACTGGGGGGCAATCTCCTCTGCGCAGCGAGAATGTGGTGTGGGATGACTTCTCTGTATTAACTGCGATGTTCCATCGTTTCAGCCATGGATCGA--------GAGCATCCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................TTTCAGCCATGGATCGA--------GAGCATC..24158.00580332200030000
.............................................................................................................................TTTCAGCCATGGATCGA--------GAGCATCCA26123.00230101300000000
............................................................................AGAATGTGGTGTGGGATGACTTCTC..........................................................25117.001709030050000
............................................TGTAACTGGGGGGCAATCTCCTCTG..........................................................................................25115.0015015000000000
.................TGAGGATAGGATGGTTTCTCCATTGAGTG.................................................................................................................29115.0015000000000015
............................................................................AGAATGTGGTGTGGGATGACTTCTCTG........................................................27111.0011010000010000
.................TGAGGATAGGATGGTTTCTCCATTGAGT..................................................................................................................2819.00900000000009
......TTCGGGGAGCTTGAGGATAGGATG.................................................................................................................................2419.00903600000000
............................................................................................TGACTTCTCTGTATTAACTGCGATGT.........................................2619.00909000000000
.............................................................................................................CTGCGATGTTCCATCGTTTCAGCCATGGAT....................3017.00700000000007
............................................................................AGAATGTGGTGTGGGATGACTTCTCT.........................................................2617.00707000000000
..............................................................................................................TGCGATGTTCCATCGTTTCAGCCATG.......................2616.00602400000000
..............................................................TCCTCTGCGCAGCGAGAATGTGGTG........................................................................2516.00605100000000
......TTCGGGGAGCTTGAGGATAGGATGGT...............................................................................................................................2616.00605000010000
.............................................................................................................................TTTCAGCCATGGATCGA--------GAGCATCC.2516.00604200000000
..............................................................................................................TGCGATGTTCCATCGTTTCAGCCATGGAT....................2916.00600000000006
.............................................................................................................................TTTCAGCCATGGATCGA--------GAGCAT...2315.00505000000000
...................................................................TGCGCAGCGAGAATGTGGTGTGGGA...................................................................2514.00404000000000
............................................................TCTCCTCTGCGCAGCGAGAATGTGG..........................................................................2514.00404000000000
..............................................................................................................................TTCAGCCATGGATCGA--------GAGCATCC.2414.00404000000000
................TTGAGGATAGGATGGTTTCTCCATT......................................................................................................................2514.00402200000000
......TTCGGGGAGCTTGAGGATAGGAT..................................................................................................................................2314.00404000000000
............................................................................AGAATGTGGTGTGGGATGACTTCT...........................................................2413.00301000020000
....................................................................GCGCAGCGAGAATGTGGTGTGGGA...................................................................2413.00303000000000
.......TCGGGGAGCTTGAGGATAGGATGG................................................................................................................................2413.00303000000000
.................................................................TCTGCGCAGCGAGAATGTGGTGTGG.....................................................................2513.00302100000000
.......TCGGGGAGCTTGAGGATAGGATGGTT..............................................................................................................................2613.00302100000000
..............................................................................................................................TTCAGCCATGGATCGA--------GAGCATC..2313.00303000000000
...................................TCCATTGAGTGTAACTGGGGGGC.....................................................................................................2313.00302100000000
..................................................TGGGGGGCAATCTCCTCTGCGCAGC....................................................................................2513.00302100000000
...............................................................................................................................TCAGCCATGGATCGA--------GAGCATCCA2413.00301100010000
......TTCGGGGAGCTTGAGGATAGGATGG................................................................................................................................2512.00202000000000
............................................................................AGAATGTGGTGTGGGATGACTTC............................................................2312.00202000000000
.............................................................................................GACTTCTCTGTATTAACTGCGATGT.........................................2512.00202000000000
..................................................................CTGCGCAGCGAGAATGTGGTGTGGGA...................................................................2612.00200000000002
................................TTCTCCATTGAGTGTAACTGGGGG.......................................................................................................2412.00201100000000
.......................................TTGAGTGTAACTGGGGGGCAATCT................................................................................................2412.00201100000000
.........................................GAGTGTAACTGGGGGGCAATCTCCTC............................................................................................2612.00202000000000
...................................................................TGCGCAGCGAGAATGTGGTGTGG.....................................................................2312.00202000000000
................................................................................TGTGGTGTGGGATGACTTCTCTGTAT.....................................................2612.00200000020000
...............................TTTCTCCATTGAGTGTAACTGGGGGG......................................................................................................2612.00202000000000
......TTCGGGGAGCTTGAGGATAGGA...................................................................................................................................2212.00202000000000
..................................................................................TGGTGTGGGATGACTTCTCTGTATT....................................................2512.00201000010000
...TATTTCGGGGAGCTTGAGGATAGG....................................................................................................................................2412.00202000000000
............................................................TCTCCTCTGCGCAGCGAGAATGTGGTG........................................................................2712.00202000000000
..................GAGGATAGGATGGTTTCTCCATTGAG...................................................................................................................2612.00202000000000
..............GCTTGAGGATAGGATGGTTTCTCCAT.......................................................................................................................2612.00201100000000
..............................................................................AATGTGGTGTGGGATGACTTCTCTG........................................................2512.00202000000000
..................................................................................TGGTGTGGGATGACTTCTCTGTAT.....................................................2412.00201000010000
............................................................................................TGACTTCTCTGTATTAACTGCGATG..........................................2512.00202000000000
..............................................................TCCTCTGCGCAGCGAGAATGTGG..........................................................................2312.00201010000000
.............................................................CTCCTCTGCGCAGCGAGAATGTGG..........................................................................2412.00202000000000
............................................TGTAACTGGGGGGCAATCTCCTCT...........................................................................................2412.00201100000000
.........................................................................GCGAGAATGTGGTGTGGGATGACT..............................................................2411.00101000000000
......TTCGGGGAGCTTGAGGATA......................................................................................................................................1911.00101000000000
.............................................GTAACTGGGGGGCAATCTCCTC............................................................................................2211.00101000000000
.................................................................................................................GATGTTCCATCGTTTCAGCCATGGATC...................2711.00100100000000
...................................................................................................TCTGTATTAACTGCGATGTTCCATCGTTG...............................2911.00101000000000
.................................................................TCTGCGCAGCGAGAATGTGGT.........................................................................2111.00100100000000
.................................................................................GTGGTGTGGGATGACTTCTCTGTA......................................................2411.00101000000000
.....TTTCGGGGAGCTTGAGGATAGG....................................................................................................................................2211.00100010000000
...................................................................TGCGCAGCGAGAATGTGGTGTGGGAT..................................................................2611.00101000000000
................................................................................................................CGATGTTCCATCGTTTCAGCCATGGAT....................2711.00101000000000
.....TTTCGGGGAGCTTGAGGATAGGATT.................................................................................................................................2511.00101000000000
.................................................................................................................GATGTTCCATCGTTTCAGCCATG.......................2311.00101000000000
....................................CCATTGAGTGTAACTGGGG........................................................................................................1911.00100100000000
...............................TTTCTCCATTGAGTGTAACT............................................................................................................2011.00100100000000
.............................................................................GAATGTGGTGTGGGATGACTTCTCTG........................................................2611.00100000010000
...................................................................TGCGCAGCGAGAATGTGGTGTGGGT...................................................................2511.00100100000000
................................................................................TGTGGTGTGGGATGACTTCTCTGTA......................................................2511.00101000000000
.............................................................................................................................TTTCAGCCATGGATCGA--------GAGCA....2211.00101000000000
......................................................................................................................TCCATCGTTTCAGCCATGGATCGA--------G........2511.00101000000000
.....................................................................................................TGTATTAACTGCGATGTTCCATCGTT................................2611.00101000000000
...........................................................ATCTCCTCTGCGCAGCGAGAATGTG...........................................................................2511.00101000000000
.....TTTCGGGGAGCTTGAGGATAGGA...................................................................................................................................2311.00101000000000
...................................................................................................................TGTTCCATCGTTTCAGCCATGGATC...................2511.00101000000000
..............................................................................................................TGCGATGTTCCATCGTTTCAGCCATGG......................2711.00101000000000
.........................................................................GCGAGAATGTGGTGTGGGATGACTT.............................................................2511.00101000000000
....................................................................GCGCAGCGAGAATGTGGTGTGG.....................................................................2211.00101000000000
.............................................................CTCCTCTGCGCAGCGAGAATGTGGT.........................................................................2511.00101000000000
............................................TGTAACTGGGGGGCAATCTCCTCTGC.........................................................................................2611.00101000000000
..............................................................................AATGTGGTGTGGGATGACTTCTC..........................................................2311.00100000010000
..........................................................................................................................TCGTTTCAGCCATGGATCGA--------GAGCATC..2711.00101000000000
..............................................................................................................................TTCAGCCATGGATCGA--------GAGCATCCA2511.00101000000000
.............................................................................GAATGTGGTGTGGGATGACTTCTCT.........................................................2511.00101000000000
................................................ACTGGGGGGCAATCTCCTCTGCGCA......................................................................................2511.00101000000000
..............................................TAACTGGGGGGCAATCTCCTCTG..........................................................................................2311.00101000000000
.............AGCTTGAGGATAGGATGGTTTCTCCA........................................................................................................................2611.00101000000000
.......TCGGGGAGCTTGAGGATAGGATGGT...............................................................................................................................2511.00101000000000
........................................TGAGTGTAACTGGGGGGCAATCTCC..............................................................................................2511.00101000000000
.....TTTCGGGGAGCTTGAGGATAGGAT..................................................................................................................................2411.00100000010000
..............................................................................................................TGCGATGTTCCATCGTTTCAGCCAT........................2511.00101000000000
.......................................TTGAGTGTAACTGGGGGGCAATCTC...............................................................................................2511.00101000000000
.................................................................TCTGCGCAGCGAGAATGTGG..........................................................................2011.00101000000000
..GTATTTCGGGGAGCTTGAGG.........................................................................................................................................2011.00101000000000
.............AGCTTGAGGATAGGATGGTTTCTCC.........................................................................................................................2511.00101000000000
............................................................................AGAATGTGGTGTGGGATGACTTCTCC.........................................................2611.00101000000000
.....TTTCGGGGAGCTTGAGGATAGGATGG................................................................................................................................2611.00101000000000
.................TGAGGATAGGATGGTTTCTCCAT.......................................................................................................................2311.00101000000000
.................................TCTCCATTGAGTGTAACTGG..........................................................................................................2011.00100000010000
.........................................................................................................TTAACTGCGATGTTCCATCGTTTCAGCC..........................2811.00101000000000
................................TTCTCCATTGAGTGTAACTGGG.........................................................................................................2211.00101000000000
.................TGAGGATAGGATGGTTTCTCCATTGAG...................................................................................................................2711.00100100000000
.................................TCTCCATTGAGTGTAACTGGGGGG......................................................................................................2411.00100000000001
............................................TGTAACTGGGGGGCAATCTCC..............................................................................................2111.00101000000000
...TATTTCGGGGAGCTTGAGGATAGGA...................................................................................................................................2511.00101000000000
...................................................................................................................TGTTCCATCGTTTCAGCCATGGATCG..................2611.00101000000000
..................................................................................TGGTGTGGGATGACTTCTCTGTATTAAC.................................................2811.00101000000000
..GTATTTCGGGGAGCTTGAGGATAGG....................................................................................................................................2511.00101000000000
..............................................................................................................TGCGATGTTCCATCGTTTCAGCCATGGA.....................2811.00101000000000
.......................................TTGAGTGTAACTGGGGGGCAATCTCC..............................................................................................2611.00101000000000
.............................GGTTTCTCCATTGAGTGTAACTGGGG........................................................................................................2611.00100010000000
..........................................................................................................................TCGTTTCAGCCATGGATCGA--------GAGCA....2511.00101000000000
...............................................................................................................................TCAGCCATGGATCGA--------GAGCATC..2211.00100100000000
...TATTTCGGGGAGCTTGAGGATA......................................................................................................................................2211.00101000000000
..................GAGGATAGGATGGTTTCTCCATTGA....................................................................................................................2511.00101000000000
..................................................TGGGGGGCAATCTCCTCTGCGCAGCG...................................................................................2611.00101000000000
.......................................................GGCAATCTCCTCTGCGCAGCGAGAA...............................................................................2511.00100100000000
............................................TGTAACTGGGGGGCAATCTCCTC............................................................................................2311.00101000000000
............................................TGTAACTGGGGGGCAATCTCCT.............................................................................................2211.00101000000000
.........................................GAGTGTAACTGGGGGGCAATCTCC..............................................................................................2411.00100100000000
........................................TGAGTGTAACTGGGGGGCAATCTCCTC............................................................................................2711.00101000000000
...................................................................................................................TGTTCCATCGTTTCAGCCATGGATCGA--------.........2711.00100100000000
.......................................................................................................TATTAACTGCGATGTTCCATCGTT................................2411.00101000000000
.......................................TTGAGTGTAACTGGGGGGCAATCTCCTC............................................................................................2811.00101000000000
.........................................................................GCGAGAATGTGGTGTGGGATGAC...............................................................2311.00100100000000
..................................................................................TGGTGTGGGATGACTTCTCTGTA......................................................2311.00100100000000
.................................................................................................TCTCTGTATTAACTGCGATGTTCC......................................2411.00101000000000
............................................................................AGAATGTGGTGTGGGATGACT..............................................................2111.00101000000000
........................................................................................................................CATCGTTTCAGCCATGGAT....................1960.17101000000000
...................................................................................................................TGTTCCATCGTTTCAGCCATGGATT...................2560.17100100000000
droEre2
AGGTATTTGGGGGTGCTGGTGGTAGGGATGGTGTCGCCGTCGAGTGTGACCGGGGGGCATTCTCCTCTGCGCAGAGAGAAGGTTGTGTGGGAGGATTTGTCAGCATTAACCATGATGTTCCAACGTTTCAGCCATGGATCCA--------GTGCATCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................TAGGGATGGTGTCGCCGTCGAGTGT................................................................................................................2564.502700000027
.................................TCGCCGTCGAGTGTGACCGGGGGGCAT...................................................................................................2740.5020000002
...............................TGTCGCCGTCGAGTGTGACCGG..........................................................................................................2280.3830000003
............................................................TCTCCTCTGCGCAGAGAGAAGGTTGTGT.......................................................................2880.1310000001

Generated: 05/15/2015 at 03:12 PM