ID:

dmo_33

 Coordinate:

scaffold_6500:14019536-14019594 +

 Confidence:

Known Ortholog

 Class:

Testes-restricted

 Genomic Locale:

antisense_to_intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.5 -19.4 -19.4

Flybase annnotation

Antisense to intron [Dmoj\GI11243-in]; utr5 [utr5_plus_813]

No Repeatable elements found

Sense Strand Reads

ATATGATGATGATTTTCCAATTGTGATGAAATCATTGAGTTCAACTTATCTTAGAATAGGGGAGCTTAACTTAATCTGAACACTCAAGCTAAGAGCCTCGATTCTTCGATAATGCGACTAACAGCAACTAATTTAACTGTGAGAGTGATTCGATAATTA

***********************************..((((((..(((((..(((((.((((..((((.(((.............))).))))..)))).)))))..))))))).))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M046

female body

 V056

head

 V049

head

 M060

embryo
..................................................TTAGAATAGGGGAGCTTAACTT....................................................................................... 22 0 1 1150.00 1150 1008 94 34 14 0
..................................................TTAGAATAGGGGAGCTTAAC......................................................................................... 20 0 1 884.00 884 851 24 4 5 0
..................................................TTAGAATAGGGGAGCTTAACT........................................................................................ 21 0 1 589.00 589 531 21 29 8 0
..................................................TTAGAATAGGGGAGCTTAACTTC...................................................................................... 23 1 1 387.00 387 375 10 1 1 0
.......................................................................................GCTAAGAGCCTCGATTCTTCG................................................... 21 0 1 207.00 207 196 5 4 2 0
..................................................TTAGAATAGGGGAGCTTAA.......................................................................................... 19 0 1 183.00 183 171 8 4 0 0
..................................................TTAGAATAGGGGAGCTTAACTTT...................................................................................... 23 1 1 113.00 113 100 2 8 3 0
..................................................TTAGAATAGGGGAGCTTAACTC....................................................................................... 22 1 1 110.00 110 104 6 0 0 0
..................................................TTAGAATAGGGGAGCTTAT.......................................................................................... 19 1 1 27.00 27 27 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAAA......................................................................................... 20 1 1 19.00 19 18 0 1 0 0
.........................................................................................TAAGAGCCTCGATTCTTCGAT................................................. 21 0 1 15.00 15 12 0 3 0 0
..................................................TTAGAATAGGGGAGCTTA........................................................................................... 18 0 1 14.00 14 7 2 4 1 0
..................................................TTAGAATAGGGGAGCTTATT......................................................................................... 20 2 1 14.00 14 13 1 0 0 0
........................................................................................CTAAGAGCCTCGATTCTTCGAT................................................. 22 0 1 12.00 12 12 0 0 0 0
.......................................................................................GCTAAGAGCCTCGATTCTTCGA.................................................. 22 0 1 11.00 11 8 3 0 0 0
..................................................TTAGAATAGGGGAGCTTAACA........................................................................................ 21 1 1 10.00 10 10 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACC........................................................................................ 21 1 1 9.00 9 9 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATC......................................................................................... 20 1 1 9.00 9 8 0 1 0 0
..................................................TTAGAATAGGGGAGCTTAACTCT...................................................................................... 23 2 1 9.00 9 9 0 0 0 0
.........................................................................................TAAGAGCCTCGATTCTTCGATA................................................ 22 0 1 8.00 8 8 0 0 0 0
...................................................TAGAATAGGGGAGCTTAACTT....................................................................................... 21 0 1 8.00 8 2 6 0 0 0
..................................................TTAGAATAGGGGAGCTTAAT......................................................................................... 20 1 1 7.00 7 6 0 1 0 0
..................................................TTAGAATAGGGGAGCTTAATT........................................................................................ 21 1 1 6.00 6 6 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTTA...................................................................................... 23 0 1 6.00 6 6 0 0 0 0
..................................................TTAGAATATGGGAGCTTAAC......................................................................................... 20 1 1 4.00 4 4 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATCTC....................................................................................... 22 2 1 4.00 4 4 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTA....................................................................................... 22 1 1 4.00 4 3 1 0 0 0
..................................................TTAGAATAGTGGAGCTTAACTT....................................................................................... 22 1 1 4.00 4 4 0 0 0 0
..................................................TTAGAATAGGGGAGCTTTC.......................................................................................... 19 2 1 3.00 3 3 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTTTT..................................................................................... 24 2 1 3.00 3 3 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTTTC..................................................................................... 24 2 1 3.00 3 3 0 0 0 0
.........................................................................................TAAGAGCCTCGATTCTTCGATT................................................ 22 1 1 3.00 3 3 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAAAT........................................................................................ 21 1 1 3.00 3 3 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAAAA........................................................................................ 21 2 2 2.50 5 5 0 0 0 0
..................................................TTAGAATAGGGGAGCTTTTC......................................................................................... 20 2 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATCC........................................................................................ 21 2 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTTTTC.................................................................................... 25 3 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGTGAGCTTAAC......................................................................................... 20 1 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGAGCTTCACT........................................................................................ 21 1 1 2.00 2 0 0 0 2 0
...................................................TAGAATAGGGGAGCTTAACT........................................................................................ 20 0 1 2.00 2 0 1 0 1 0
..................................................TTAGGATAGGGGAGCTTAACTT....................................................................................... 22 1 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTTCT..................................................................................... 24 2 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATCT........................................................................................ 21 1 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAAAAAAA..................................................................................... 24 3 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGTGAGCTTAA.......................................................................................... 19 1 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGTAGCTTAAC......................................................................................... 20 1 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGGGCTTAACTTC...................................................................................... 23 2 1 2.00 2 2 0 0 0 0
..................................................CTAGAATAGGGGAGCTTAAC......................................................................................... 20 1 1 2.00 2 2 0 0 0 0
.......................................................................................GCTAAGAGCCTCGATTCTTC.................................................... 20 0 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAATC........................................................................................ 21 2 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAATCT....................................................................................... 22 2 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGGGGGGCTTAACTT....................................................................................... 22 1 1 2.00 2 1 0 0 1 0
..................................................TTAGAATAGGTGAGCTTAACTTC...................................................................................... 23 2 1 2.00 2 2 0 0 0 0
..................................................TTAGAATATGGGAGCTTAACTC....................................................................................... 22 2 1 2.00 2 2 0 0 0 0
........................................................................................CTAAGAGCCTCGATTCTTCGATA................................................ 23 0 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGTGGAGCTTAAC......................................................................................... 20 1 1 2.00 2 2 0 0 0 0
..................................................TTAGAATAGTGGAGCTTAACT........................................................................................ 21 1 1 2.00 2 2 0 0 0 0
...........ATTATCCAATTGTGTTGAAG................................................................................................................................ 20 3 20 1.95 39 10 28 0 1 0
..................................................TTAGAATAGGGGAGCTTTT.......................................................................................... 19 2 7 1.57 11 11 0 0 0 0
.........................................................................................TAAGAGCCTCGATTCTTCGATAA............................................... 23 0 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGCGCTTAACTT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGTGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAGCTTT...................................................................................... 23 2 1 1.00 1 0 0 0 1 0
..................................................TTAGAATAGGGGAGATTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
...................................................TAGAATAGGGGAGCTTAACTTC...................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.........................................................................................TAAGAGCCTCGATTCTTCGATCT............................................... 23 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGATCTTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
................................................ATTTAGAATAGGGGAGCTTAACT........................................................................................ 23 2 1 1.00 1 0 1 0 0 0
..................................................TGAGAATAGGGGAGCTTAACTT....................................................................................... 22 1 1 1.00 1 0 0 0 1 0
..................................................TTAGAATAGGGGAGCTTTG.......................................................................................... 19 2 2 1.00 2 2 0 0 0 0
..................................................TCAGAATAGGGGAGCTTAACTT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................TTAAAATAGGGGAGCTTAACTTC...................................................................................... 23 2 1 1.00 1 1 0 0 0 0
..................................................TCAGAATAGGGGAGCTTAACTC....................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGGGCTTAA.......................................................................................... 19 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACAT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
................................................TCTTAGAATAGGGGAGCTTAACT........................................................................................ 23 0 1 1.00 1 0 1 0 0 0
..................................................TTAGAGTAGGGGAGCTTAACTTC...................................................................................... 23 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGAGGAGCTTAACTC....................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATTT........................................................................................ 21 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAGC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGTGCTTAA.......................................................................................... 19 1 1 1.00 1 0 0 1 0 0
..................................................TTAGAATAGGGGAGCTTACCTT....................................................................................... 22 1 1 1.00 1 0 0 1 0 0
..................................................TTAGAATAGGGGAGCTTATCTTC...................................................................................... 23 2 1 1.00 1 1 0 0 0 0
...................................................TAGAATAGGGGAGCTTAA.......................................................................................... 18 0 1 1.00 1 0 1 0 0 0
..................................................TTATAATAGGGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGTGAGCTTATC......................................................................................... 20 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCCTAACTT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................TTTGAATAGGGGAGCTTAACTTC...................................................................................... 23 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATATGGGAGCTTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
................................................TCTTAGAATAGGGGAGCTTAAC......................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAG.......................................................................................... 19 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAAGGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAGTAGGGGAGCTTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTCTCTC....................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGCAGCTTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATTTC....................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTC........................................................................................... 18 1 1 1.00 1 0 1 0 0 0
..................................................TTAGAATAGGGGAGCTTAATCTC...................................................................................... 23 3 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACCT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGTGAGCTTAT.......................................................................................... 19 2 1 1.00 1 1 0 0 0 0
.........................................................................................TAAGAGCCTCGATTCTTCGATC................................................ 22 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTTA.......................................................................................... 19 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAACAGGGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
....................................................AGAATAGGGGAGCTTAAC......................................................................................... 18 0 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTCACTT....................................................................................... 22 1 1 1.00 1 0 0 0 1 0
..................................................TTAGCATAGGGGCGCTTAACTT....................................................................................... 22 2 1 1.00 1 0 0 1 0 0
..................................................TTAGAATAGGGGAGCGTAA.......................................................................................... 19 1 1 1.00 1 0 0 0 1 0
..................................................TTAGAATAGGGGAGCTTAATTT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................CTAAGAGCCTCGATTCTTCGA.................................................. 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................GCTAAGAGCCTCGATTTTTCG................................................... 21 1 1 1.00 1 0 0 0 1 0
.......................................................................................GCTAAGAGTCTCGATTCTTCG................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGAAGCTTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTCACTTC...................................................................................... 23 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAGCT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGGATAGGGGTGCTTTACTT....................................................................................... 22 3 1 1.00 1 0 0 1 0 0
..................................................TTACAATAGGGGAGCTTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAGTAGGGGAGCTTAACCT....................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAATTC....................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTCTCT........................................................................................ 21 2 1 1.00 1 1 0 0 0 0
.................................................ATTAGAATAGGGGAGCTTAACTT....................................................................................... 23 1 1 1.00 1 0 1 0 0 0
.................................................CTTAGAATAGGGGAGCTTAACT........................................................................................ 22 0 1 1.00 1 1 0 0 0 0
..................................................TTAGAATGGGGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
...................................................TTAAATAGGGGAGCTTAACTT....................................................................................... 21 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATTTT....................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGTGAGCTTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGAGGAGCTTAACT........................................................................................ 21 1 1 1.00 1 0 0 0 1 0
..................................................TGAGAATAGGGGTGCTTTACTT....................................................................................... 22 3 1 1.00 1 0 0 0 1 0
.......................................................................................GCTAAGAGCCTCTATTCTTCG................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGCGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCTAAGAGCCTCGATTCTTCGAC................................................. 23 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCTAAAAACCTCGATTCTTCG................................................... 21 2 1 1.00 1 0 0 0 1 0
..................................................TTAGAATAGGGGCGCTTAACTTC...................................................................................... 23 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTCTT..................................................................................... 24 3 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGGGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGTGCTTA........................................................................................... 18 1 1 1.00 1 0 0 1 0 0
..................................................TTAGAATAGGGGAGCTTAACTGGC..................................................................................... 24 3 1 1.00 1 0 1 0 0 0
..................................................TTAGAATAGGGGAGCTTTTCTTC...................................................................................... 23 3 1 1.00 1 1 0 0 0 0
..................................................TTAGGATAGGGGAGCTTAACTTC...................................................................................... 23 2 1 1.00 1 0 1 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTTCA..................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCTAAGAGCCTCGATTCTTCGC.................................................. 22 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAAG......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGAGGAGCTTAACTT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATCTT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................TTAGCATAGGGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 0 0 0 1 0
..................................................TTAGAATAGGGGAGATTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGTGAGCTTAAA......................................................................................... 20 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGACCTTAA.......................................................................................... 19 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTTCCA........................................................................................ 21 3 1 1.00 1 1 0 0 0 0
........................................................................................CTAAGAGCCTCGACTCTTCGAT................................................. 22 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGATTAACTT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCTAAGAGCCTCGATTCTTCGAT................................................. 23 0 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTTCC..................................................................................... 24 2 1 1.00 1 0 1 0 0 0
..................................................TTAGAATACGGGAGCTTAACTT....................................................................................... 22 1 1 1.00 1 0 0 0 1 0
..................................................TTAGAATAGGGGAGCTTCTC......................................................................................... 20 2 1 1.00 1 1 0 0 0 0
..................................................TGAGAATAGGGGAGCTTAACT........................................................................................ 21 1 1 1.00 1 0 0 0 0 1
..................................................TTAGAATAGGGGTGCTTAACT........................................................................................ 21 1 1 1.00 1 0 0 1 0 0
..................................................TTAGAACAGGGGAGCTTAACT........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
........................................................................................CTAAGAGCCTCGATTCTTCGAAT................................................ 23 2 1 1.00 1 1 0 0 0 0
..................................................TTAGGATACGGGAGCTTAACTT....................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTT........................................................................................... 18 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGAGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCCAAGAGCCTCGATTCTTCG................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACCC....................................................................................... 22 2 1 1.00 1 0 1 0 0 0
..................................................TTAGAATGGGGGTGCTTAACTC....................................................................................... 22 3 1 1.00 1 0 0 1 0 0
..................................................TAAGAATAGGGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.................................................ATTAGAATAGGGGAGCTTAACTC....................................................................................... 23 2 1 1.00 1 0 1 0 0 0
..................................................TTAGAATACGGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGTGAGCTTAACTC....................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..................................................TTAGAGTAGGGGAGCTTAAC......................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCTAAGAGCCTCGATTCTACG................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAACTTTA..................................................................................... 24 1 1 1.00 1 1 0 0 0 0
..................................................TTAGAATAGGGGGGCTTAACTTT...................................................................................... 23 2 1 1.00 1 0 0 1 0 0
..................................................TTAGAGTAGGGGAGCTTAACTT....................................................................................... 22 1 1 1.00 1 0 0 0 1 0
..................................................TTAGGATAGGGGAGCTTTATTT....................................................................................... 22 3 1 1.00 1 0 0 1 0 0
..................................................TTAGAATAGGGGAGCTTCT.......................................................................................... 19 2 5 0.60 3 3 0 0 0 0
..................................................TTAGAATAGGGGAGTTTTCCT........................................................................................ 21 3 2 0.50 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTAACTTT....................................................................................... 22 3 2 0.50 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTAATCA....................................................................................... 22 3 2 0.50 1 1 0 0 0 0
.........................................................................................TAAGAGACTCGAATCTTCGAGA................................................ 22 3 2 0.50 1 0 0 1 0 0
...........ATTATCCAATTGTGTTGAA................................................................................................................................. 19 2 17 0.47 8 3 5 0 0 0
....................................................TCAATAGGGGAGCTTAACTTC...................................................................................... 21 3 3 0.33 1 1 0 0 0 0
..................................................TTAGAATAGTGGAACTTAACT........................................................................................ 21 2 3 0.33 1 1 0 0 0 0
..................................................TTAGAGTAGGGGACATTAACTT....................................................................................... 22 3 3 0.33 1 0 0 1 0 0
..................................................TTAGAATATAGGGGCTTAACT........................................................................................ 21 3 3 0.33 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTATTC........................................................................................ 21 3 3 0.33 1 1 0 0 0 0
..................................................TTAGAATAGGGGCGCTTAT.......................................................................................... 19 2 3 0.33 1 1 0 0 0 0
...........ATTATCCAATTGTGTTGAAGT............................................................................................................................... 21 3 6 0.17 1 0 0 1 0 0
..................................................TTAGAATAGCAGAGATTAACTT....................................................................................... 22 3 6 0.17 1 0 0 1 0 0
..................................................TTAGAATAGGGGAGCTCTC.......................................................................................... 19 3 9 0.11 1 1 0 0 0 0
..................................................TTAGAATAGGGGAGCTTCTT......................................................................................... 20 3 13 0.08 1 0 0 1 0 0
..................................................TTAGAATAGTGGAGCTTATT......................................................................................... 20 3 13 0.08 1 1 0 0 0 0
....................................TGGTTCAACTTATCCTAGA........................................................................................................ 19 3 15 0.07 1 0 1 0 0 0

Anti-sense strand reads

TATACTACTACTAAAAGGTTAACACTACTTTAGTAACTCAAGTTGAATAGAATCTTATCCCCTCGAATTGAATTAGACTTGTGAGTTCGATTCTCGGAGCTAAGAAGCTATTACGCTGATTGTCGTTGATTAAATTGACACTCTCACTAAGCTATTAAT

************************************..((((((..(((((..(((((.((((..((((.(((.............))).))))..)))).)))))..))))))).))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total V056

head

 V110

male body
...........................................................................................................CTTTTACGCTGATTATCGTTG............................... 21 2 2 0.50 1 1 0
..............AGGGTTAACACTAGTTTAG.............................................................................................................................. 19 2 2 0.50 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6500:14019486-14019644 + dmo_33 confident ATATGATG-------ATGATTTTCC-----AATTGT--GATGAA--------ATCAT--------TGAGTTCAACTTATCTTAGAATAGGGGAGCTTAACTTAA----TCTGAACACTCAAGCTAAGAGCCTCGATTCTTCGATAATGCGACTAAC-------------------A--------------GCAACTAATTTAACTGTGAGAGTGATTCGATAATTA
droVir3 scaffold_12963:3616453-3616574 + dvi-mir-964 Known_mirbase ATGTTTCAA-AA-G----TTTTCATAT-------------------TGAAAATACAT--------TAAGTTTAACTTATCTTAGAATAGGGGAGCTTAACTT-TGT--ATG-AACATTTAAGCTAAGAGCCTCAATTCTTAGATAATGCGACTAAC-------------------A--------------AC----------------------------------
droGri2 scaffold_15252:3148299-3148416 + TTTCAGTT------GATT------AGA--A------G-----AG--------TGCAT--------TATGTCAAACTTATCTTAGAATAGGGGAGCTTAACTTTTATCATATTAGCGCTCGAGCTAAGATCCTCAATTCTTGGATAAGGCGACTAGC-------------------A--------------AC----------------------------------
droWil2 scf2_1100000004962:172290-172421 - A-------------------------------------------------------------------GTCAAAATTGTCTTAGAATAGGGGAGCTTAACTTATAT--TATTTTGCTTTAAGTTAAGAGCCTCAATTCTAAGATAATGCGACTATCACCGCAGCA-------------------ATTCAGGTAAAACGTAAC--TTTGACATTA---AGACAACT-
droAna3 scaffold_12916:11085550-11085669 + dan_35 confident ATACGAGT-------G--TTCGCGGGATGA------G-----CA--------TC------GAATCAAAGTCAAACTTGTTTTAGAATAGGGGAGCTTAACTTATTGGAGAGTTGATATTAAGTTAAGATCCCTAATTCTAAGATAATGTGACCA------------------------------------------------------------------------
droBip1 scf7180000396572:743312-743441 + GATAAAAGT-GTT-CAT------CGGA-AA------G-----AA--------TCCAT------CAAAAGTCACACTTGTTTTAGAATAGGGGAGCTTGACTTGTTAAAGAGTTGATATAAAGTTAAGATCCTTTATTCTAAGATAATGTGACCATTATAGCAAC--------------------------------------------------------------
droKik1 scf7180000302389:430186-430308 - GGTGGAAA-------AGGTAATTCA-----GACAG---------------------------AGATAAGTCAGACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--GGCAGATATTTAAGTTAAGAGCCTTAATTCTAAGACAAAGCGACTGGAAAAGCAGC--------------------------------------------------------------
droFic1 scf7180000453932:196438-196595 - TTAAAATAATCA-G----TCCCAGTAATGA------G-----AA--------TCCATCTCAGCCCAATGGCGAACTTGTCTTAGAATAGGGGAGCTTAACTTGGA---ATCTTGTGTTGAAGTTAAGAGCCATAATTCTAAGACAATTCGACCATAAAATCAACA----------------------------------------ATGAGAGTGACTATA-TTTTA
droEle1 scf7180000490753:31715-31882 + TTGT--------------------------------CA-----AATTAT--------TTAAACCAGAGGTCATACTTGCCTTAGAATAGGGGAGCTTGACTTATGT--GCGTTATGTTTAAGTTAAGAGCCTTAATTCTAAGATAATTCGACTATCAAAACAGCA----TGCTATTTTGTATATATCAAATCAAAATGTTTT--TTTTACAG-----AGATGACGA
droRho1 scf7180000761061:148-278 + CCACCATAATAA-A----TTATTGTGTTGC------CA-----AATTAT--------TCAAGCCCAAGGTCATACTTGCCTTAGAATAGGGGAGCTTAACTTATGT--TCGTTGTGTTTAAGTTAAGAGCCTTGATTCTAAGATAATTCGACCATC-------------------A--------------------------------------------------
droBia1 scf7180000302422:3831782-3831904 + GCATGCTG----------------C-----AATGGC--GAT-AAACTGA--------TAAAACCGACTGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--GTGCCGATTTTAAGTTAAGAGCCTTTTTTCTAAGATAATCCGACTATC-------------------A--------------------------------------------------
droTak1 scf7180000415871:386460-386583 + AAGTTATGC-AT-G----CTATTGCG---C------CA-----AATTAA--------TATAAACCGAGGTCTAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--AGGTCATGTTTAAGTTAAGAGCCTTTTTTCTAAGATAATTCGACTA------------------------------------------------------------------------
droEug1 scf7180000409063:318449-318566 + ACTCGAGC-------AAT-A----------------CCAGT-AA--TAA----------TAATCCGAGGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--ACGCAATGTTTAAGTTA-GATCCTTTTTTCTAAGATAATTCGGCTGTC-------------------A--------------G-----------------------------------
dm3 chr2L:5642090-5642201 + dme-mir-964 Known_mirbase AGTTGGTG-------ATA---------------------------CCAA--------TA-ACATATTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTATGT--TTTTGATGTTTAAGTTAAAAGCCTCTGTTCTAAGACAATTTGATGATC-------------------A--------------------------------------------------
droSim2 2l:5446834-5446951 + dsi-mir-964 Known_mirbase ATGTGGTT-------ATG-----------A------CA-----AGTCAA--------TCAAAATCTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGT--TTTTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATC-------------------A--------------------------------------------------
droSec2 scaffold_5:3719821-3719938 + dse_44 confident ATGTGGTT-------ATG-----------A------TA-----AGTCAA--------TCAAAATCTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGT--TTTTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATC-------------------A--------------------------------------------------
droYak3 2L:13551015-13551179 - dya_32 confident CTATGATC-----------------------------------AATCAA--------TG-AAATCTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--ATATCATGTATAAGTTAAGAACCTTTATTCTAAGACAATTCGACTACAAAATCAACTGAAAAACTACT--------------TCAACTTGTTTTATTTTGAAACTTATTAGA-AATTA
droEre2 scaffold_4929:5730486-5730618 + der_29 confident AGTTGGTT-------ACATCCTTGC-----GTTAGT--GAT-CAATCAA--------TA-ACGTTTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTGTGT--GTGTTATGCTTAAGTTAAGAGCCTTTATTCTAAGTCAATTCGACTGCC-------------------A--------------AC----------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATATGATG-------ATGATTTTCC-----AATTGT--GATGAA--------ATCAT--------TGAGTTCAACTTATCTTAGAATAGGGGAGCTTAACTTAA----TCTGAACACTCAAGCTAAGAGCCTCGATTCTTCGATAATGCGACTAAC-------------------A--------------GCAACTAATTTAACTGTGAGAGTGATTCGATAATTASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................2211150.001150940143401008
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................201884.00884240540851
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................211589.005892108290531
................................................................................TTAGAATAGGGGAGCTTAACTTC...........................................................................................................................231387.00387100110375
.........................................................................................................................GCTAAGAGCCTCGATTCTTCG....................................................................................211207.0020750240196
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................191183.0018380040171
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................231113.0011320380100
................................................................................TTAGAATAGGGGAGCTTAACTC............................................................................................................................221110.0011060000104
................................................................................TTAGAATAGGGGAGCTTAT...............................................................................................................................19127.00270000027
................................................................................TTAGAATAGGGGAGCTTAAA..............................................................................................................................20119.00190001018
...........................................................................................................................TAAGAGCCTCGATTCTTCGAT..................................................................................21115.00150003012
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................18114.0014201407
................................................................................TTAGAATAGGGGAGCTTATT..............................................................................................................................20114.00141000013
..........................................................................................................................CTAAGAGCCTCGATTCTTCGAT..................................................................................22112.00120000012
.........................................................................................................................GCTAAGAGCCTCGATTCTTCGA...................................................................................22111.0011300008
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................21110.00100000010
................................................................................TTAGAATAGGGGAGCTTAACC.............................................................................................................................2119.009000009
................................................................................TTAGAATAGGGGAGCTTAACTCT...........................................................................................................................2319.009000009
...........................................................................................................................TAAGAGCCTCGATTCTTCGATA.................................................................................2218.008000008
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................2118.008600002
................................................................................TTAGAATAGGGGAGCTTAAT..............................................................................................................................2017.007000106
................................................................................TTAGAATAGGGGAGCTTAACTTA...........................................................................................................................2316.006000006
................................................................................TTAGAATAGGGGAGCTTAACTA............................................................................................................................2214.004100003
................................................................................TTAGAATAGGGGAGCTTTC...............................................................................................................................1913.003000003
................................................................................TTAGAATAGGGGAGCTTAACTTTT----......................................................................................................................2413.003000003
................................................................................TTAGAATAGGGGAGCTTAACTTTC----......................................................................................................................2413.003000003
...........................................................................................................................TAAGAGCCTCGATTCTTCGATT.................................................................................2213.003000003
................................................................................TTAGAATAGGGGAGCTTAAAA.............................................................................................................................2122.505000005
................................................................................TTAGAATAGGGGAGCTTAACTTTT----C.....................................................................................................................2512.002000002
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................2012.002101000
................................................................................TTAGAATAGGGGAGCTTAACTTCT----......................................................................................................................2412.002000002
.........................................................................................................................GCTAAGAGCCTCGATTCTTC.....................................................................................2012.002000002
................................................................................TTAGAATAGGGGAGCTTAATC.............................................................................................................................2112.002000002
..........................................................................................................................CTAAGAGCCTCGATTCTTCGATA.................................................................................2312.002000002
................................................................................TTAGAATAGGGGAGCTTTT...............................................................................................................................1971.57110000011
...........................................................................................................................TAAGAGCCTCGATTCTTCGATAA................................................................................2311.001000001
.................................................................................TAGAATAGGGGAGCTTAACTTC...........................................................................................................................2211.001000001
...........................................................................................................................TAAGAGCCTCGATTCTTCGATCT................................................................................2311.001000001
................................................................................TTAGAATAGGGGAGCTTTG...............................................................................................................................1921.002000002
..............................................................................TCTTAGAATAGGGGAGCTTAACT.............................................................................................................................2311.001100000
.................................................................................TAGAATAGGGGAGCTTAA...............................................................................................................................1811.001100000
..............................................................................TCTTAGAATAGGGGAGCTTAAC..............................................................................................................................2211.001000001
................................................................................TTAGAATAGGGGAGCTTAG...............................................................................................................................1911.001000001
................................................................................TTAGAATAGGGGAGCTTC................................................................................................................................1811.001100000
...........................................................................................................................TAAGAGCCTCGATTCTTCGATC.................................................................................2211.001000001
..................................................................................AGAATAGGGGAGCTTAAC..............................................................................................................................1811.001000001
..........................................................................................................................CTAAGAGCCTCGATTCTTCGA...................................................................................2111.001000001
...............................................................................CTTAGAATAGGGGAGCTTAACT.............................................................................................................................2211.001000001
.........................................................................................................................GCTAAGAGCCTCGATTCTTCGAC..................................................................................2311.001000001
................................................................................TTAGAATAGGGGAGCTTAACTCTT----......................................................................................................................2411.001000001
................................................................................TTAGAATAGGGGAGCTTAACTGGC----......................................................................................................................2411.001100000
.........................................................................................................................GCTAAGAGCCTCGATTCTTCGC...................................................................................2211.001000001
................................................................................TTAGAATAGGGGAGCTTAAG..............................................................................................................................2011.001000001
.........................................................................................................................GCTAAGAGCCTCGATTCTTCGAT..................................................................................2311.001000001
................................................................................TTAGAATAGGGGAGCTTAACTTCC----......................................................................................................................2411.001100000
..........................................................................................................................CTAAGAGCCTCGATTCTTCGAAT.................................................................................2311.001000001
................................................................................TTAGAATAGGGGAGCTTT................................................................................................................................1811.001000001
................................................................................TTAGAATAGGGGAGCTTAACCC............................................................................................................................2211.001100000
................................................................................TTAGAATAGGGGAGCTTCT...............................................................................................................................1950.603000003
................................................................................TTAGAATAGGGGAGCTTAATCA............................................................................................................................2220.501000001
................................................................................TTAGAATAGGGGAGCTTATTC.............................................................................................................................2130.331000001
................................................................................TTAGAATAGGGGAGCTCTC...............................................................................................................................1990.111000001
................................................................................TTAGAATAGGGGAGCTTCTT..............................................................................................................................20130.081000100
droVir3
ATGTTTCAA-AA-G----TTTTCATAT-------------------TGAAAATACAT--------TAAGTTTAACTTATCTTAGAATAGGGGAGCTTAACTT-TGT--ATG-AACATTTAAGCTAAGAGCCTCAATTCTTAGATAATGCGACTAAC-------------------A--------------AC----------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................211110430.0011043028810244213476772601570634524256164101602971849312212436507648939091153674125820585650238088530000000000001000132031123490105823633437542350223510144361
................................................................................TTAGAATAGGGGAGCTTAACTT-...........................................................................................................................22177894.00778949044436191603631951391801127312230291261008273721205880949096757462347511985046023012986467000000000001000119131313080216821720232232011122663
................................................................................TTAGAATAGGGGAGCTTAACTT-C..........................................................................................................................23110011.0010011740350231088455161366200000002014882014347557358246111810104710001912260000000000000003364000614026000159728900000
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................2016615.006615180210939520101315149017000101001442101393546476242327500329001024200000000000000000030018700903111347120063
................................................................................TTAGAATAGGGGAGCTTAACTT-T..........................................................................................................................2313970.003970911014323122765647300000000038100301364813311595280358000063190000000000000100010009300100310100200000
................................................................................TTAGAATAGGGGAGCTTAACTC-...........................................................................................................................2213451.003451220014144301111246510000000104110092021210202143415028200002377000000000000000012500015502001061310218200000
................................................................................TTAGAATAGGGGAGCTTAACC.............................................................................................................................2112956.0029562104505288734136060000000002821070212256317170565014100003263000000000000000001910013200100044717200001
.........................................................................................................................GCTAAGAGCCTCAATTCTTAGA...................................................................................2212066.0020660016005043512820001000002700003545724731546170370030126000000000000000000000103300000000000000
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................1911087.0010870050364466110210001100008500713801641577217006510000740000000000000000000012600400000000000010
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................181830.00830001000427812961000000000650020230111127481160800000234000000000000000000000100000000000000000
..........................................................................................................................CTAAGAGCCTCAATTCTTAGAT..................................................................................221712.00712000002404060000000100150001024210136612090160010020000000000000000000000000200000000000000
..........................................................................................................................CTAAGAGCCTCAATTCTTAGA...................................................................................211391.003910000012030630000010001120000301227630950110000015000000000000000000000100000000000000000
.................................................................................TAGAATAGGGGAGCTTAACTT-...........................................................................................................................211373.00373004100190280602000000001180000013403617590120000228000000000000000000000401000000000010000
................................................................................TTAGAATAGGGGAGCTTAACTT-CT.........................................................................................................................241370.003700010048200900000000000440000100231784403900000350000000000000000000001800000000000000000
.........................................................................................................................GCTAAGAGCCTCAATTCTTA.....................................................................................201325.0032500000341150140000000000230000100547115430290000025000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTT................................................................................................................................181320.00320001001226607910000000001700000003246637012000009000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTC................................................................................................................................181297.00297002014010056000000000033000000023418240410000025000000000000000000000000000000101000000
................................................................................TTAGAATAGGGGAGCTTAACTT-CA.........................................................................................................................241287.00287103002920080000000000520030000291414510310000040000000000000000000010700200000000000000
................................................................................TTAGAATAGGGGAGCTTAACTT-TC.........................................................................................................................241242.002421010026000661000000000250010000121210380130000026000000000000000001000900000000000000000
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................201187.001871025009030030000000000090000001825421050000013000000000000000000010400100000000000000
...............................................................................CTTAGAATAGGGGAGCTTAACT.............................................................................................................................221172.00172101001202302500000000109000001022131325010000008000000000000000000000500000003000000000
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................211159.0015900604511201000000000004700103148831002001019000000000000000000000600111300000041123
................................................................................TTAGAATAGGGGAGCTTAACTA-...........................................................................................................................221152.00152002001532555200000000016006501111586601003042000000000000000000000101101200000000122
...............................................................................CTTAGAATAGGGGAGCTTAACTT-...........................................................................................................................231131.001310000070120172000000000160001000228720030000011000000000000000000000500000000000000000
................................................................................TTAGAATAGGGGAGCTTAAA..............................................................................................................................201101.001010020283511900000000003001002191071205000004000000000000000000000300000200000000101
................................................................................TTAGAATAGGGGAGCTTAACTT-CC.........................................................................................................................24195.0095002005000200000000004000120041283905000006000000000000000000000500000000000000000
..........................................................................................................................CTAAGAGCCTCAATTCTTAG....................................................................................20192.00920000040111000000000000001002331162801000012000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACCC-...........................................................................................................................22182.0082204002000400000000002700000004621304000006000000000000000001000400000002000100000
.........................................................................................................................GCTAAGAGCCTCAATTCTTC.....................................................................................20181.00810000060001000000000013000001011103150100000010000000000000000000000100000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTA-AA.........................................................................................................................24174.007400302210101001000000100024551010001017240000000000000000000000001410400000010036
................................................................................TTAGAATAGGGGAGCTTAACTT-TT.........................................................................................................................24172.0072000016011016000000000080000010862702000010000000000000000000000300000000000000000
................................................................................TTAGAATAGGGGAGCTTAACG.............................................................................................................................21171.0071400004130160000000000150000000100004000003000000000000000000000200000000000000000
.........................................................................................................................GCTAAGAGCCTCAATTCTTAG....................................................................................21170.007000000001203000000000030000000151541201000004000000000000000000000100000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTT-A..........................................................................................................................23169.00690030122206100000000060010012672901001028000000000000000000000100000200000000021
................................................................................TTAGAATAGGGGAGCTTTC...............................................................................................................................19166.00660010050012100000000002000000041117010000012000000000000000000000000000000000000000
.................................................................................TAGAATAGGGGAGCTTAACTT-C..........................................................................................................................22159.005900300300011000000000081000000705804000007000000000000000000000200000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTC-C..........................................................................................................................23154.005400200200020000000000600000005241806000007000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTT-TTC--......................................................................................................................25150.005000000500015000000000030000000921703000002000000000000000000000300000000000000000
................................................................................TTAGAATAGGGGAGCTTAACAA-...........................................................................................................................22145.004500300010000000000000400010200100000000000000000000000000000000000341100000041334
................................................................................TTAGAATAGGGGAGCTTAACCA-...........................................................................................................................22145.004500170013000000000000060011141010102000031000000000000000000000000200000000000000
................................................................................TTAGAATAGGGGAGCTTAACTT-AAA--......................................................................................................................25145.00450000002000010100000000002064000100105051000000000000000000000000301300000012321
..........................................................................................................................CTAAGAGCCTCAATTCTTAGATC.................................................................................23143.00430000010000000000000000000000151131300000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTG-...........................................................................................................................22141.004100000203050000000000170000000200001000004000000000000000000000400000100000000110
................................................................................TTAGAATAGGGGAGCTTAACTA-A..........................................................................................................................23140.00400030021010300000000020000035000200009060000000000000000000000100000020000000000
...........................................................................................................................TAAGAGCCTCAATTCTTAGAT..................................................................................21138.0038000001000000000000001000000013651200000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAT...............................................................................................................................19138.003800001103014000000000020000000170601000002000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTCT...............................................................................................................................19138.00380000030006000000000070000000142505000005000000000000000000000000000000000000000
...........................................................................................................................TAAGAGCCTCAATTCTTAGA...................................................................................20137.00370000090302100000000030000000821202000012000000000000000000000000100000000000000
....................................................................................AATAGGGGAGCTTAACTT-...........................................................................................................................18135.00350000000505000000000070000000421207000002000000000000000000000000000000000000000
.........................................................................................................................GCTAAGAGCCTCAATTCTT......................................................................................19134.00340000041101000000000040000000960211000004000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTCC...............................................................................................................................19232.5065001001600070000000000700000000337070000013000000000000000000000100000000000000000
................................................................................TTAGAATAGGGGAGCTTTT...............................................................................................................................19232.0064000001019028000000000000000000530304000001000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTT-AA.........................................................................................................................24132.00320020200000110000000000001142100001015041000000000000000000000000100100000020001
................................................................................TTAGAATAGGGGAGCTTAACTT-TCC--......................................................................................................................25130.00300000050005000000000020000000330403000004000000000000000001000000000000000000000
...................................................................................GAATAGGGGAGCTTAACTT-...........................................................................................................................19127.00270010050102000000000040000000114402000002000000000000000000000000000000000000000
..................................................................................AGAATAGGGGAGCTTAACTT-...........................................................................................................................20126.00260030020315000000000010000000520101000000000000000000000000000200000000000000000
..................................................................................AGAATAGGGGAGCTTAACT.............................................................................................................................19126.00260020040101000000000001000000342402000001000000000000000000000100000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTT-TTC--C.....................................................................................................................26125.00250000020002000000000010000000440503000002000000000000000000000200000000000000000
.............................................................................ATCTTAGAATAGGGGAGCTTAACT.............................................................................................................................24124.002400000000000000000000000000001211100000000000000000000000000000000000000000000000
...................................................................................GAATAGGGGAGCTTAACT.............................................................................................................................18123.00230010040004000000000030010000002203000003000000000000000000000000000000000000000
...............................................................................CTTAGAATAGGGGAGCTTAACTT-C..........................................................................................................................24119.00190020020002000000000010000000121102000005000000000000000000000000000000000000000
.................................................................................TAGAATAGGGGAGCTTAACTT-T..........................................................................................................................22117.00170000000302000000000020000000111501000001000000000000000000000000000000000000000
.................................................................................TAGAATAGGGGAGCTTAACTC-...........................................................................................................................21116.00162020000004000000000030000000000201000002000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACAA-A..........................................................................................................................23116.00160010000000000000000000001001000000000000000000000000000000000000101200000000144
................................................................................TTAGAATAGGGGAGCTTAACTT-G..........................................................................................................................23115.00150000110102000000000020000000112003000001000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAAAA.............................................................................................................................21214.00280010004002100100000010010220111010003010000000000000000000010000010200000000001
...............................................................................CTTAGAATAGGGGAGCTTAAC..............................................................................................................................21113.00130000000002000000000000000000261200000000000000000000000000000000000000000000000
...........................................................................................................................TAAGAGCCTCAATTCTTAGATC.................................................................................22113.00130000000000000000000000000000412203000000000000000000000000000000000000000100000
................................................................................TTAGAATAGGGGAGCTTAAT..............................................................................................................................20113.00130000010203100000000000000000011201000001000000000000000000000000000000000000000
.........................................................................................................................GCTAAGAGCCTCAATTCTTAGAA..................................................................................23113.00130000000000000000000000000010321600000000000000000000000000000000000000000000000
............................................................................................................................AAGAGCCTCAATTCTTAGA...................................................................................19112.00120000020400000000000030000000020000000001000000000000000000000000000000000000000
.........................................................................................................................GCTAAGAGCCTCAATTCTTAGAC..................................................................................23112.00120000000000000000000000000000530400000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTATT..............................................................................................................................20112.00120000010901000000000000000000100000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAATC.............................................................................................................................21111.00110010010003000000000010000000220100000000000000000000000000000000000000000000000
..........................................................................................................................CTAAGAGCCTCAATTCTTA.....................................................................................19111.00110000040000000000000010000000100203000000000000000000000000000000000000000000000
.............................................................................ATCTTAGAATAGGGGAGCTTAACTT-...........................................................................................................................25111.001100000000000000000000000000000110000000000000000000000000000000000000000000000000
...........................................................................................................................TAAGAGCCTCAATTCTTAGATA.................................................................................22111.00110000000000000000000020000010331100000000000000000000000000000000000000000000000
..............................................................................TCTTAGAATAGGGGAGCTT.................................................................................................................................19110.00100000040000000000000000000000000302000001000000000000000000000000000000000000000
..........................................................................................................................CTAAGAGCCTCAATTCTTAGATT.................................................................................23110.00100000000000000000000000000000430300000000000000000000000000000000000000000000000
.................................................................................TAGAATAGGGGAGCTTAACC.............................................................................................................................2019.0090040010000000000000010000010010000000000000000000000000000000100000000000000000
................................................................................TTAGAATAGGGGAGCTTACT..............................................................................................................................2019.0090000020004000000000000000000110100000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAC...............................................................................................................................1919.0090000000001000000000010000000031100000002000000000000000000000000000000000000000
.....................................................................................ATAGGGGAGCTTAACTT-C..........................................................................................................................1818.0080000000000000000000020000000100003000002000000000000000000000000000000000000000
..........................................................................................................................CTAAGAGCCTCAATTCTTAGAC..................................................................................2218.0080000000000000000000000001001300300000000000000000000000000000000000000000000000
...............................................................................CTTAGAATAGGGGAGCTTAACTC-...........................................................................................................................2317.0070000000000000000000020000000110101100000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTT-TA.........................................................................................................................2417.0070010000200000000000000000000200200000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTC-A..........................................................................................................................2317.0070000020000000000000020000000001001000000000000000000000000000100000000000000000
................................................................................TTAGAATAGGGGAGCTTAACCG-...........................................................................................................................2216.0060000000000000000000050000000000100000000000000000000000000000000000000000000000
..........................................................................................................................CTAAGAGCCTCAATTCTTAGAA..................................................................................2216.0060000010000000000000000001000020200000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTT-CTC--......................................................................................................................2516.0060000020000000000000000000000010200000000000000000000000000000100000000000000000
.........................................................................................................................GCTAAGAGCCTCAATTCT.......................................................................................1816.0060000010301000010000000000000000000000000000000000000000000000000000000000000000
.................................................................................TAGAATAGGGGAGCTTAACTA-...........................................................................................................................2116.0060030000010000000000010000010000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACGC-...........................................................................................................................2216.0060000010200000000000030000000000000000000000000000000000000000000000000000000000
...............................................................................CTTAGAATAGGGGAGCTTAACC.............................................................................................................................2216.0060000000000000000000010000000010200000000000000000000000000000200000000000000000
...........................................................................................................................TAAGAGCCTCAATTCTTAGATT.................................................................................2216.0060000000000000000000010000000120002000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAAAC.............................................................................................................................2116.0060000010000000000000020010000100100000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTG................................................................................................................................1816.0060000000104000000000000000000001000000000000000000000000000000000000000000000000
droGri2
TTTCAGTT------GATT------AGA--A------G-----AG--------TGCAT--------TATGTCAAACTTATCTTAGAATAGGGGAGCTTAACTTTTATCATATTAGCGCTCGAGCTAAGATCCTCAATTCTTGGATAAGGCGACTAGC-------------------A--------------AC----------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................211103.00103796
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................22180.00801268
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................21115.0015510
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................20112.0012012
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................2318.00835
..............................................................................TCTTAGAATAGGGGAGCTT.................................................................................................................................1914.00413
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................2013.00321
...............................................................................CTTAGAATAGGGGAGCTTAAC..............................................................................................................................2113.00303
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................1812.00220
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................1912.00202
................................................................................TTAGAATAGGGGAGCTTAACTTC...........................................................................................................................2312.00202
.................................................................................TAGAATAGGGGAGCTTAAC..............................................................................................................................1912.00211
...............................................................................CTTAGAATAGGGGAGCTTAACT.............................................................................................................................2212.00211
..........................................................................................................................CTAAGATCCTCAATTCTTGGAT..................................................................................2212.00220
..............................................................................TCTTAGAATAGGGGAGCTTAAC..............................................................................................................................2212.00211
...........................................................................................................................TAAGATCCTCAATTCTTGGAT..................................................................................2112.00220
..............................................................................TCTTAGAATAGGGGAGCTTAACT.............................................................................................................................2311.00101
................................................................................TTAGAATAGGGGAGCTTAACTC............................................................................................................................2211.00101
...................................................................................GAATAGGGGAGCTTAACT.............................................................................................................................1811.00101
................................................................................TTAGAATAGGGGAGCTTCC...............................................................................................................................1911.00101
................................................................................TTAGAATAGGGGAGCTTAACC.............................................................................................................................2111.00101
..............................................................................TCTTAGAATAGGGGAGCTTT................................................................................................................................2011.00101
..........................................................................................................................CTAAGATCCTCAATTCTTGGA...................................................................................2111.00110
.........................................................................................................................GCTAAGATCCTCAATTCTTGG....................................................................................2111.00110
............................................................................................................................AAGATCCTCAATTCTTGGAT..................................................................................2011.00110
.................................................................................TAGAATAGGGGAGCTTAACTTT...........................................................................................................................2211.00101
................................................................................TTAGAATAGGGGAGCTTAACTA............................................................................................................................2211.00101
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................2111.00101
droWil2
A-------------------------------------------------------------------GTCAAAATTGTCTTAGAATAGGGGAGCTTAACTTATAT--TATTTTGCTTTAAGTTAAGAGCCTCAATTCTAAGATAATGCGACTATCACCGCAGCA-------------------ATTCAGGTAAAACGTAAC--TTTGACATTA---AGACAACT-SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................................TTAAGAGCCTCAATTCTAAGAT..................................................................................22845.8836711343148
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................22929.11262211229128
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................21925.5623039199514
.......................................................................................................................AAGTTAAGAGCCTCAATTCTAA.....................................................................................2289.38750051195
..........................................................................................................................TTAAGAGCCTCAATTCTAAGA...................................................................................2188.8871007001
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................2098.1173017002
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................2198.1173096031
...........................................................................................................................TAAGAGCCTCAATTCTAAGAT..................................................................................2185.0040003613
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................2095.0045023823
.......................................................................................................................AAGTTAAGAGCCTCAATTCT.......................................................................................2084.5036302625
.................................................................................TAGAATAGGGGAGCTTAACTTA...........................................................................................................................2294.0036022680
.........................................................................................................................GTTAAGAGCCTCAATTCTAAGA...................................................................................2283.6329002711
...........................................................................................................................TAAGAGCCTCAATTCTAAGATA.................................................................................2283.1325002500
.................................................................................TAGAATAGGGGAGCTTAACTTAT..........................................................................................................................2393.0027002412
.......................................................................................................................AAGTTAAGAGCCTCAATTCTA......................................................................................2182.5020001730
................................................................................TTAGAATAGGGGAGCTTAAA..............................................................................................................................2092.0018001800
.......................................................................................................................AAGTTAAGAGCCTCAATTCTAAG....................................................................................2381.8815001302
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................1991.6715011400
........................................................................................................................AGTTAAGAGCCTCAATTCTAAG....................................................................................2281.381100902
.........................................................................................................................GTTAAGAGCCTCAATTCTAAG....................................................................................2181.2510001000
..........................................................................................................................TTAAGAGCCTCAATTCTAAG....................................................................................2081.2510001000
.................................................................................TAGAATAGGGGAGCTTAACTTATA.........................................................................................................................2491.1110001000
................................................................................TTAGAATAGGGGAGCTTAAAA.............................................................................................................................21101.101101910
........................................................................................................................AGTTAAGAGCCTCAATTCTAA.....................................................................................2181.00800323
.......................................................................................................................AAGTTAAGAGCCTCAATTCTAAA....................................................................................2381.00800530
..........................................................................................................................TTAAGAGCCTCAATTCTAAGAA..................................................................................2281.00800800
................................................................................TTAGAATAGGGGAGCTTAAAAA............................................................................................................................22110.9110001000
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................2190.89800710
.................................................................................TAGAATAGGGGAGCTTAACTTT...........................................................................................................................2290.56500500
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................2390.56500401
.........................................................................................................................GTTAAGAGCCTCAATTCTAAGAT..................................................................................2380.50400400
................................................................................TTAGAATAGGGGAGCTTATT..............................................................................................................................2090.44400301
................................................................................TTAGAATAGGGGAGCTTAACC.............................................................................................................................2190.44402200
...........................................................................................................................TAAGAGCCTCAATTCTAAGATC.................................................................................2280.38300300
...........................................................................................................................TAAGAGCCTCAATTCTAAGA...................................................................................2080.38300201
..........................................................................................................................TTAAGAGCCTCAATTCTAAGATC.................................................................................2380.38301200
.................................................................................TAGAATAGGGGAGCTTAACTTATAT--T.....................................................................................................................2690.33300300
..........................................................................................................................TTAAGAGCCTCAATTCTAAGATA.................................................................................2380.25200200
........................................................................................................................AGTTAAGAGCCTCAATTCTAAA....................................................................................2280.25200110
.........................................................................................................................GTTAAGAGCCTCAATTCTAA.....................................................................................2080.25200020
..........................................................................................................................TTAAGAGCCTCAATTCTAAGATT.................................................................................2380.25200200
.................................................................................TAGAATAGGGGAGCTTAACTA............................................................................................................................2190.22201010
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................1890.22201010
..................................................................................AGAATAGGGGAGCTTAACTTAT..........................................................................................................................2290.22200110
..................................................................................AGAATAGGGGAGCTTAACTTA...........................................................................................................................2190.22200200
...............................................................................CTTAGAATAGGGGAGCTTAACT.............................................................................................................................2290.22201100
..............................................................................TCTTAGAATAGGGGAGCTTAACT.............................................................................................................................2390.22200200
............................................................................TGTCTTAGAATAGGGGAGCTTAAC..............................................................................................................................2490.22202000
.................................................................................TAGAATAGGGGAGCTTAACTTAA..........................................................................................................................2390.22200110
.....................................................................TCAAAATTGTCTTAGAATAGGG.......................................................................................................................................2250.20100010
.....................................................................TCAAAATTGTCTTAGAATAGGGGAG....................................................................................................................................2550.20101000
................................................................................TTAGAATAGGGGAGCTTTT...............................................................................................................................19110.18200200
.....................................................................................................................TTAAGTTAAGAGCCTCAATTCTAAGA...................................................................................2670.14100010
...................................................................................................................CTTTAAGTTAAGAGCCTCAATTCTAA.....................................................................................2670.14100100
...............................................................................................................................................................................................TAAAACGTAAC--TTTGACATTA---AGACA....2670.14101000
...........................................................................................................................TAAGAGCCTCAATTCTAAGAA..................................................................................2180.13100010
.........................................................................................................................GTTAAGAGCCTCAATTCTAAA....................................................................................2180.13100010
.......................................................................................................................AAGTTAAGAGCCTCAATTC........................................................................................1980.13100100
..........................................................................................................................TTAAGAGCCTCAATTCTAAGATTT................................................................................2480.13100100
.........................................................................................................................GTTAAGAGCCTCAATTCTAAGT...................................................................................2280.13100100
........................................................................................................................AGTTAAGAGCCTCAATTCTA......................................................................................2080.13100100
.........................................................................................................................GTTAAGAGCCTCAATTCTAT.....................................................................................2080.13100100
.......................................................................................................................AAGTTAAGAGCCTCAATTCTAT.....................................................................................2280.13100001
.........................................................................................................................GTTAAGAGCCTCAATTCTAAGAC..................................................................................2380.13100100
................................................................................TTAGAATAGGGGAGCTTAACTA............................................................................................................................2290.11101000
.................................................................................TAGAATAGGGGAGCTTAACG.............................................................................................................................2090.11110000
...................................................................................GAATAGGGGAGCTTAACTTT...........................................................................................................................2090.11100100
................................................................................TTAGAATAGGGGAGCTTAACAA............................................................................................................................2290.11100100
................................................................................TTAGAATAGGGGAGCTTAT...............................................................................................................................1990.11100100
............................................................................TGTCTTAGAATAGGGGAGCTTAAA..............................................................................................................................2490.11101000
..................................................................................AGAATAGGGGAGCTTAACT.............................................................................................................................1990.11100100
.................................................................................TAGAATAGGGGAGCTTAAC..............................................................................................................................1990.11100010
..............................................................................TCTTAGAATAGGGGAGCTTAAC..............................................................................................................................2290.11101000
................................................................................TTAGAATAGGGGAGCTTAACTTTCC.........................................................................................................................2590.11100100
.................................................................................TAGAATAGGGGAGCTTAAAA.............................................................................................................................20100.10100100
.................................................................................TAGAATAGGGGAGCTTAAAAA............................................................................................................................21150.07100100
droAna3
ATACGAGT-------G--TTCGCGGGATGA------G-----CA--------TC------GAATCAAAGTCAAACTTGTTTTAGAATAGGGGAGCTTAACTTATTGGAGAGTTGATATTAAGTTAAGATCCCTAATTCTAAGATAATGTGACCA------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................211239.002397101520214
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................221229.0022918002217514
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................231109.001093007936
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................211107.0010716008821
.................................................................................TAGAATAGGGGAGCTTAACTTA...........................................................................................................................22173.00734005622
.................................................................................TAGAATAGGGGAGCTTAACTTT...........................................................................................................................22167.00672003611
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................20147.00470001460
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................20133.00330002292
................................................................................TTAGAATAGGGGAGCTTAACTTC...........................................................................................................................2319.009000171
................................................................................TTAGAATAGGGGAGCTTAACTTA...........................................................................................................................2318.008100052
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................1915.005000140
................................................................................TTAGAATAGGGGAGCTTAT...............................................................................................................................1913.003100110
.................................................................................TAGAATAGGGGAGCTTAACTTAT..........................................................................................................................2313.003000030
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................1812.002100100
..................................................................................AGAATAGGGGAGCTTAACT.............................................................................................................................1912.002200000
..........................................................................................................................TTAAGATCCCTAATTCTAAGA...................................................................................2112.002000020
.................................................................................TAGAATAGGGGAGCTTAAC..............................................................................................................................1912.002000020
................................................................................TTAGAATAGGGGAGCTTATT..............................................................................................................................2021.002000011
.................................................................................TAGAATAGGGGAGCTTAACTAT...........................................................................................................................2211.001000010
.................................................................................TAGAATAGGGGAGCTTAACTTATT.........................................................................................................................2411.001000010
................................................................................TTAGAATAGGGGAGCTTTT...............................................................................................................................1941.004000040
................................................................................TTAGAATAGGGGAGCTTAACTTTA..........................................................................................................................2411.001000010
.................................................................................TAGAATAGGGGAGCTTAACTG............................................................................................................................2111.001000010
........................................................................................................................AGTTAAGATCCCTAATTCT.......................................................................................1911.001000001
.................................................................................TAGAATAGGGGAGCTTAACTTAA..........................................................................................................................2311.001000010
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................2111.001000010
.........................................................................................................................GTTAAGATCCCTAATTCTAAG....................................................................................2111.001100000
.........................................................................................................................GTTAAGATCCCTAATTCTAAGA...................................................................................2211.001000010
.................................................................................TAGAATAGGGGAGCTTAACTTC...........................................................................................................................2211.001000010
......................................................................................................ATTGGAGAGTTGATATTAA.........................................................................................................1911.001000001
................................................................................TTAGAATAGGGGAGCTTAAG..............................................................................................................................2011.001000010
................................................................................TTAGAATAGGGGAGCTTT................................................................................................................................1811.001000100
..................................................................................AGAATAGGGGAGCTTAACTT............................................................................................................................2011.001000010
................................................................................TTAGAATAGGGGAGCTTAACG.............................................................................................................................2111.001000010
................................................................................TTAGAATAGGGGAGCTTAACTTAT..........................................................................................................................2411.001000010
..................................................................................AGAATAGGGGAGCTTAACTTT...........................................................................................................................2111.001000010
.................................................................................TAGAATAGGGGAGCTTATT..............................................................................................................................1920.501000010
droBip1
GATAAAAGT-GTT-CAT------CGGA-AA------G-----AA--------TCCAT------CAAAAGTCACACTTGTTTTAGAATAGGGGAGCTTGACTTGTTAAAGAGTTGATATAAAGTTAAGATCCTTTATTCTAAGATAATGTGACCATTATAGCAAC--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GGTGGAAA-------AGGTAATTCA-----GACAG---------------------------AGATAAGTCAGACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--GGCAGATATTTAAGTTAAGAGCCTTAATTCTAAGACAAAGCGACTGGAAAAGCAGC--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTAAAATAATCA-G----TCCCAGTAATGA------G-----AA--------TCCATCTCAGCCCAATGGCGAACTTGTCTTAGAATAGGGGAGCTTAACTTGGA---ATCTTGTGTTGAAGTTAAGAGCCATAATTCTAAGACAATTCGACCATAAAATCAACA----------------------------------------ATGAGAGTGACTATA-TTTTASizeHit CountTotal NormTotal
No Reads
droEle1
TTGT--------------------------------CA-----AATTAT--------TTAAACCAGAGGTCATACTTGCCTTAGAATAGGGGAGCTTGACTTATGT--GCGTTATGTTTAAGTTAAGAGCCTTAATTCTAAGATAATTCGACTATCAAAACAGCA----TGCTATTTTGTATATATCAAATCAAAATGTTTT--TTTTACAG-----AGATGACGASizeHit CountTotal NormTotal
No Reads
droRho1
CCACCATAATAA-A----TTATTGTGTTGC------CA-----AATTAT--------TCAAGCCCAAGGTCATACTTGCCTTAGAATAGGGGAGCTTAACTTATGT--TCGTTGTGTTTAAGTTAAGAGCCTTGATTCTAAGATAATTCGACCATC-------------------A--------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCATGCTG----------------C-----AATGGC--GAT-AAACTGA--------TAAAACCGACTGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--GTGCCGATTTTAAGTTAAGAGCCTTTTTTCTAAGATAATCCGACTATC-------------------A--------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAGTTATGC-AT-G----CTATTGCG---C------CA-----AATTAA--------TATAAACCGAGGTCTAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--AGGTCATGTTTAAGTTAAGAGCCTTTTTTCTAAGATAATTCGACTA------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ACTCGAGC-------AAT-A----------------CCAGT-AA--TAA----------TAATCCGAGGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--ACGCAATGTTTAAGTTA-GATCCTTTTTTCTAAGATAATTCGGCTGTC-------------------A--------------G-----------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AGTTGGTG-------ATA---------------------------CCAA--------TA-ACATATTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTATGT--TTTTGATGTTTAAGTTAAAAGCCTCTGTTCTAAGACAATTTGATGATC-------------------A--------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................22126149.00261490000010010444000000003793753000010000001326161286221910917361451410301400010000000000000000000107750141141200042142118105151111942212500931316519213219201000000100012000000100211200286921958911681728361500000008405250500312741145600093210354942223235031181128247100001225003100335382351103311451702454371835940624350000000540201000340054000000000100002010000175909361692113820106111002101210241546011255730793372418742838001124756330602035001119133632852667430402300
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................21116906.00169060000010000040000000022112196020100000019161453627131257301714321630113812000000000000000000000304104026000107815315879003101970000243277103301200001001000000000000101010347120643121104223229220000000154082004014115505018027052874547212532262100550212796521000162480240016088290113217672921721153319511921020000220120031251036000001001000003000500127608281098751856210006294141151239010175042752871884408617001195146500600005100140184158050795625902320
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................2118794.00879400000201000130000000000216790000000000022201030011831341200000000000000000000000000002004000201400106217100415040018051206520237000000000000000000000000000003131911837047000000005100000200051202010000301430121652800042501048190000004000000100136326510103854116201300000000100000000140019000000000000001001000645331772763330000000100137720247410158456339413009962201101000000521124459103100000
.................................................................................TAGAATAGGGGAGCTTAACTTA...........................................................................................................................2215545.005545000001000003000000100109670000000000031310007000630124300000000000000000000000101002000000113003700150011010000060403001100000000000000000000000000000161535344100000000002001001000502000100002001814842200020705401000000300000022344912131461031000000001100000001800170000000000000000010004432110207453391000000001156001414312197353310624003751500100011000281120454157101100
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................2015261.005261000000000007000000000017790000000000053520161201532413000000000000000000000000010007000000102004212200014420030150170101000001001000000000000000000000482191530061000000000020000010002010002000011002465907410023204184000004100000000026391853110261114400000000000100000800800000000000000000000059410115276342000000030002570162104171004911822230011222500400000000321129101311144501000
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................2011842.0018420000000000010000000000227700000000000140101106416412375000000000000000000000000110000010000000062230010220000011200000000000000000000000000000000041617814810410000030020000000001020013100010004841662200510805000002120000030014583446148192053114102111002000000103004000000000000000000200249042527319100001400011300108512212622535001366910000000000623798964301010
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................231913.009130000000010000000000000069001000000000000000001011012000000000000000000000000000000000000000000000200050000001001000300000000000000000000000000000115423140000000000000000010010100000000100690184000024013400000000000000000314110043810270000000000010000020010000000000000000100000812041210000000000300000221810747510035000000000000862412113000000
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................191665.0066500000000000000000000001131000000000000111000120241011000000000000000000000000000000000000000010101300010000000012100800000000000000000000000000000328242031200000000000010000010000020000000184952000200260000000100000000021506132430210000000000000000010050000000000000000000002251312011000012010030002204410216180031260000000000021523013100000
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................181395.003950000000000000000000000073000000000001020100002050000010000000000000000000000001010000000000000010200000100000001000000000000000000000000000000000011005000000000000000000000000003000000000826120002401500000000000000000011130012100000000000200000000000000000000000000000000019160003000000200001200001037274003300000000000011320432800000
.................................................................................TAGAATAGGGGAGCTTAAC..............................................................................................................................191395.00395000000000000000000000025800000000000000000000000000000000000000000000000000000000000000000000030020000010000000200000000000000000000000000000000003210100000000000000000000000000000000001010443000017015000000010000000002709004400000010000000000000010010000000000000000000006513504020000000000031100202469560011020000000010010611121000000
.................................................................................TAGAATAGGGGAGCTTAACTTT...........................................................................................................................221310.003100000000000000000000000056000000000000000000000000100000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000001000000000000000000000000000000000000604510001305100000000000000000240010100000000000000000000001001000000000000000000000360233010000000000040000011937121800062000000000000090102400000
.................................................................................TAGAATAGGGGAGCTTAACTTAA..........................................................................................................................231205.00205000000000000000000000009000000000000000000000100000000000000000000000000000000000000000000000500400100000100001000000000000000000000000000000000000000000000000000000000000000000000000000200480000304400000000000000000050100000100000000000000000000000000000000000000000000010010100000000000001100000051281100021000000000000070000100000
.........................................................................................................................GTTAAAAGCCTCTGTTCTAAGA...................................................................................221198.0019800000000000000000000000600000000000000000010000000000000000000000000000000000310000000000000090000000010000000500000000000000000000000000000000000010200000000050000000000005400000000000000500001014000000000000000012011367276426350000000000000000000010000000000000000000000000000000000000000000000000120000001000000000000000100100000
..........................................................................................................................TTAAAAGCCTCTGTTCTAAGA...................................................................................211169.0016900000000000000000000001130000000000000000001000100000000000000000000000000000000000000000000003000000100000001020002000000000000000000000000000000000050000000000000000000000100000020000004014000010300000001000000000150075837751111000010000000000002000000000000000000000000030013000000000000000000000021000010000000000000000000200000
.................................................................................TAGAATAGGGGAGCTTAA...............................................................................................................................181135.001350000000000000000000000031000000000000100000000010000000000000000000000000000000000000000000000400200000100000001000000000000000000000000000000000001010000000000000000000000000000000000000302010004012000000000000000000003000000000000000000000000000010000000000000000000001900022300000000000300001112114100020000000000002010100100000
................................................................................TTAGAATAGGGGAGCTTAACTTATC.........................................................................................................................251131.0013100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTTA...........................................................................................................................231122.00122000000000000000000000013300000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000050800004060000000000000000003001100000000002100000000000100000000000000000000000014000000000000000001000000151231000820000000000000020000400000
.........................................................................................................................GTTAAAAGCCTCTGTTCTAAG....................................................................................211121.001210000000000010000000000012000010000000000000200010000000000000000000000000000000000000000000000900100100000000107000000000000000000000000000000000010002000000000000000000000007011102000000001000000100000000000000000020182711201616000000000000000000000000000000000000000000000001000000000000000000000020000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTATC..........................................................................................................................24181.008100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAAA..............................................................................................................................20173.007300000000000000000000002110000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000003030000404000000000000000000001000100100000000000000000000000000000000000000000001300010000000000000100000000213400010000000000000020000000000
..............................................................ATATTGGTCCAACTTGCC..................................................................................................................................................18163.006300000000000000000000000180000000000000000000000000000000000000000000000000000000002002000000001200400300000100007000200000000000000000000000000000000000000000000000000000200000000000000000004000000000000000000000000010010000000000000000000000000000000000000000000010000000000000000000000000000000010000200000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................21160.006000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000001001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000303000000000000000000000001100010000100000000000020000000000000000000000000300000000000000000000010000183200000000000000000010011100000
................................................................................TTAGAATAGGGGAGCTTT................................................................................................................................18160.00600000000000000000000000180000000000000100000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010010000000000000000000000000000000000001070000101200000000000000000006000000000000000000000000000000000000000000000000000000000000000000000200000000170000000000000000000000000900000
........................................................................................................................AGTTAAAAGCCTCTGTTCTAAG....................................................................................22159.00590000000000000000000000017000000000000000000000000000000000000000000000000000001100200000000000300600010000000002000300000000000000010000000000000001010000000000000000000000000000000000000002000000100000000000000000000030230044000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTAAAAGCCTCTGTTCTAAG....................................................................................20154.00540000000000000000000000012000000000000000000000000000000000000000000000000000010000000000000000300000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000006000000300000000000000000220123241032000000000000000012000000000000000000000000010000000000000000000000000020000000000000000000000000000000
.................................................................................TAGAATAGGGGAGCTTAACTTAAA.........................................................................................................................24141.0041000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309000000500000000000000000000000000000000000000000000000000000000000000000000000010002000000000000020000001160900010000000000000010000000000
.................................................................................TAGAATAGGGGAGCTTAACTTAT..........................................................................................................................23137.0037000000000001000000000002000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407000020300000000000000000010000000000000001000000000000000000000000000000000000010100000000000000000000000241200003000000000001000000000000
................................................................................TTAGAATAGGGGAGCTTAACTC............................................................................................................................22135.00350000000000000000000000030000000000000000000010000000000000000000000000000000000000000000000000001000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000020500000000000000000100000000000000020000000000000000000000000000000000000010100010000000000000000000012000000000000000000020000000000
..................................................................................AGAATAGGGGAGCTTAACTT............................................................................................................................20135.00350000000000010000000000040000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000000000000100000000000000000000000000000000000000000030000005000000000000000000001000000000000000000000000000000000000000000000000000200000000000000000200000001101000000000000000001010000000000
.................................................................................TAGAATAGGGGAGCTTAACTTATC.........................................................................................................................24135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTTC...........................................................................................................................23132.0032000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000600000000000000000000100001000000072000000000000000000000000000000000000010000000000000000000000000030100000000000000000010000000000
..................................................................................AGAATAGGGGAGCTTAACT.............................................................................................................................19131.0031000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000102000000100000000000000000220000000001000000000000000000000000000000000000000000020200000000000000000000100080000010000000000000001000100000
................................................................................TTAGAATAGGGGAGCTTAACTA............................................................................................................................22129.0029000001000003000000000006000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000101000010100000000000000000000100000000000011000000000000000000000000000000000000000001000000000000000000000132100000000000000000010000000000
...............................................................................CTTAGAATAGGGGAGCTTAACTT............................................................................................................................23127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302000010800000000000000000000000001000000000000000000000000000000000000000000000020000000000000000000000000040300010000000000001000000000000
.................................................................................TAGAATAGGGGAGCTTAAA..............................................................................................................................19125.0025000000000000000000000006000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000001000000000000000000000030000010000000000000000000051200000000000000000010000000000
........................................................................................................................AGTTAAAAGCCTCTGTTCTAA.....................................................................................21124.0024000000000000000000000004000000000000000000001000000000000000000000000000000000000000000010000900300000100000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTAAAAGCCTCTGTTCTAAGAA..................................................................................22123.0023000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000100000000000100000000000000000000000000000000000001100000000000000000000000000000000000000002000000000000000000000000010012051111100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................CATATTGGTCCAACTTGCC..................................................................................................................................................19123.00230000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000100300100000000000002000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AGTTAAAAGCCTCTGTTCT.......................................................................................19122.0022000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000300000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000101011000000000000000000000000000000000000000000120001010000000000010000000000000000000000000000000000000000
...................................................................................GAATAGGGGAGCTTAACTT............................................................................................................................19122.0022000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100100000000000002000000000000000000000000000000000000000000000000000000000000000000000000000300000020100000000000000000000000000000000000000000000000000000000000000000000000190000000000000000010000000000000000000000000000000000000000
.................................................................................TAGAATAGGGGAGCTTAACA.............................................................................................................................20121.0021000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000003000010000000000000000000000000100000000000000000000000000000000000000000000000100100000000000000000000002041000000000000000000020000000000
.................................................................................TAGAATAGGGGAGCTTAACTTC...........................................................................................................................22120.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000010000000000000000000000000000000000000030001000000000000010000000221300000000000000000030000000000
........................................................................................................................AGTTAAAAGCCTCTGTTCTA......................................................................................20120.0020000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000300000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000010010000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACG.............................................................................................................................21119.0019000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000063200000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACC.............................................................................................................................21119.0019000000000000000000000004000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010100000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000151000000000000000000000000100000
..................................................................................AGAATAGGGGAGCTTAACTTA...........................................................................................................................21118.0018000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000020000000000000101000010200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000050000010000000000000000001000000
.................................................................................TAGAATAGGGGAGCTTAACTA............................................................................................................................21116.0016000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010100000000000000000000000000000000000000000000000000000000000000000000000050001000000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAT...............................................................................................................................19115.0015000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000010000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000020000100000000000001000000000000
...............................................................................CTTAGAATAGGGGAGCTTAACT.............................................................................................................................22113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000010300000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000021000010000000000000010000000000
.................................................................................TAGAATAGGGGAGCTTAACTATC..........................................................................................................................23113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................AATAGGGGAGCTTAACTT............................................................................................................................18113.0013000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000100000000000000000000000000000000000000000000000000000000000000000000000160000000000000000100000000000000000000000000000000000000000
.................................................................................TAGAATAGGGGAGCTTAACTC............................................................................................................................21112.0012000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000200000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000011000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTG............................................................................................................................22112.0012000000000000000000000002000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000102000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000
.........................................................................................................................GTTAAAAGCCTCTGTTCTAA.....................................................................................20112.0012000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000104000010100000000000000000000000110010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTAAAAGCCTCTGTTCTAAGAT..................................................................................22111.0011000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010000000000000000000010000101002000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GTTAAAAGCCTCTGTTCTAAGT...................................................................................22110.0010000000000000000000000001000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000100000
............................................................ACATATTGGTCCAACTTGCC..................................................................................................................................................20110.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111020002000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTATT..............................................................................................................................20110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061000000000000000000000010100000
.....................................................................................ATAGGGGAGCTTAACTT............................................................................................................................17110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTTT...............................................................................................................................1929.50190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000100000000100000110000000000000000010000000
................................................................................TTAGAATAGGGGAGCTTAACTTAA..........................................................................................................................2419.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000010000000000000000000000000000000000000000000000000000010001000000000000000000000000200000000000000000020000000000
................................................................................TTAGAATAGGGGAGCTT.................................................................................................................................1719.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTAGAATAGGGGAGCTTAAAA.............................................................................................................................2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000020000000000
...................................................................................GAATAGGGGAGCTTAACTTA...........................................................................................................................2017.007000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTAAAAGCCTCTGTTCTAAGAC..................................................................................2217.007000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000002000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000
droSim2
ATGTGGTT-------ATG-----------A------CA-----AGTCAA--------TCAAAATCTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGT--TTTTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATC-------------------A--------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................22119654.0019654094265928320007024118816000
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................2119383.00938301511242408620700332198845000
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................201995.0099501500227372500203713000
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................231437.0043701501001000000420000
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................191384.00384000021820400000160000
..........................................................................................................................TTAAAAGCCACTGTTCTAAGAC..................................................................................221341.00341425025046156002101000
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................18166.0066000061101002001000
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................21156.0056000000000000056000
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................21152.00520000101000010040000
................................................................................TTAGAATAGGGGAGCTTAACTA............................................................................................................................22149.0049020000000010046000
.................................................................................TAGAATAGGGGAGCTTAACTTG...........................................................................................................................22143.0043000070100010034000
................................................................................TTAGAATAGGGGAGCTTAAA..............................................................................................................................20142.0042000000000000042000
.........................................................................................................................GTTAAAAGCCACTGTTCTAAGA...................................................................................22133.00330400101010000017000
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................20125.0025010020150100015000
.........................................................................................................................GTTAAAAGCCACTGTTCTAAG....................................................................................21120.0020040060000000010000
..........................................................................................................................TTAAAAGCCACTGTTCTAAGA...................................................................................21119.001903105023000104000
.........................................................................................................................GTTAAAAGCCACTGTTCTAAGAC..................................................................................23116.0016000016000000000000
...........................................................................................................................TAAAAGCCACTGTTCTAAGAC..................................................................................21112.0012010002000000000000
..........................................................................................................................TTAAAAGCCACTGTTCTAAG....................................................................................20112.0012000011000001000000
..............................................................ATCTTGGTCCAACTTGCC..................................................................................................................................................18111.001105302000001000000
................................................................................TTAGAATAGGGGAGCTTAACTTA...........................................................................................................................23110.0010000000000000010000
................................................................................TTAGAATAGGGGAGCTTAACC.............................................................................................................................2119.00906000000001002000
.........................................................................................................................GTTAAAAGCCACTGTTCTAA.....................................................................................2019.00900001000000008000
..........................................................................................................................TTAAAAGCCACTGTTCTA......................................................................................1818.00800008000000000000
.................................................................................TAGAATAGGGGAGCTTAA...............................................................................................................................1817.00700007000000000000
...........................................................................................................................TAAAAGCCACTGTTCTAAGACA.................................................................................2216.00603002000000001000
..........................................................................................................................TTAAAAGCCACTGTTCTAA.....................................................................................1916.00600006000000000000
.........................................................................................................................GTTAAAAGCCACTGTTCTA......................................................................................1916.00600005000000001000
................................................................................TTAGAATAGGGGAGCTTAACTG............................................................................................................................2215.00500000000000005000
................................................................................TTAGAATAGGGGAGCTTAAAA.............................................................................................................................2115.00500000000000005000
.................................................................................TAGAATAGGGGAGCTTAAC..............................................................................................................................1915.00500005000000000000
..........................................................................................................................TTAAAAGCCACTGTTCTAAGACA.................................................................................2314.00402002000000000000
...................................................................................GAATAGGGGAGCTTAACTT............................................................................................................................1914.00400001000003000000
................................................................................TTAGAATAGGGGAGCTTTT...............................................................................................................................1924.00800000000000008000
................................................................................TTAGAATAGGGGAGCTTAACTAA...........................................................................................................................2314.00400000000000004000
................................................................................TTAGAATAGGGGAGCTTT................................................................................................................................1814.00400000000000004000
................................................................................TTAGAATAGGGGAGCTTAACTTG...........................................................................................................................2314.00400001000000003000
................................................................................TTAGAATAGGGGAGCTTAAT..............................................................................................................................2013.00300000000000003000
................................................................................TTAGAATAGGGGAGCTTAACG.............................................................................................................................2113.00300000000000003000
..........................................................................................................................TTAAAAGCCACTGTTCTAAGACT.................................................................................2313.00302000010000000000
...............................................................................CTTAGAATAGGGGAGCTTAACT.............................................................................................................................2213.00300000001000002000
................................................................................TTAGAATAGGGGAGCTTAACTTAA..........................................................................................................................2413.00300000000000003000
................................................................................TTAGAATAGGGGAGCTTAACTC............................................................................................................................2213.00300000000000003000
................................................................................TTAGAATAGGGGAGCTTAACTTTA..........................................................................................................................2413.00300000000000003000
................................................................................TTAGAATAGGGGAGCTTAACAA............................................................................................................................2213.00300000000000003000
.........................................................................................................................GTTAAAAGCCACTGTTCT.......................................................................................1813.00300002000001000000
................................................................................TTAGAATAGGGGAGCT..................................................................................................................................1613.00300000000003000000
...........................................................................................................................TAAAAGCCACTGTTCTAAG....................................................................................1912.00200002000000000000
................................................................................TTAGAATAGGGGAGCTTAACTTAAA.........................................................................................................................2512.00200000000000002000
..................................................................................AGAATAGGGGAGCTTAACTT............................................................................................................................2012.00200001000000001000
.........................................................................................................................GTTAAAAGCCACTGTTCTAAGAA..................................................................................2312.00200000000000002000
..................................................................................AGAATAGGGGAGCTTAACT.............................................................................................................................1912.00200000000001001000
.................................................................................TAGAATAGGGGAGCTTAACTTT...........................................................................................................................2212.00200000000000002000
................................................................................TTAGAATAGGGGAGCTTAACTAAA..........................................................................................................................2412.00200000000000002000
...........................................................................................................................TAAAAGCCACTGTTCTAAGA...................................................................................2012.00200001000000001000
................................................................................TTAGAATAGGGGAGCTT.................................................................................................................................1712.00200000000002000000
................................................................................TTAGAATAGGGGAGCTTAACTTC...........................................................................................................................2311.00100000000000001000
.................................................................................TAGAATAGGGGAGCTTAACG.............................................................................................................................2011.00101000000000000000
..........................................................................................................................TTAAAAGCCACTGTTCTAAGAA..................................................................................2211.00100000010000000000
........................................................................................................................AGTTAAAAGCCACTGTTC........................................................................................1811.00100001000000000000
.................................................................................TAGAATAGGGGAGCTTAACTTAA..........................................................................................................................2311.00100000000000001000
..........................................................................................................................TTAAAAGCCACTGTTCTAAGG...................................................................................2111.00101000000000000000
...........................................................................................................................TAAAAGCCACTGTTCTAAGACC.................................................................................2211.00100000000000100000
..........................................................................................................................TTAAAAGCCACTGTTCTAAGACC.................................................................................2311.00101000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTTTAA.........................................................................................................................2511.00100000000000001000
........................................................................................................................AGTTAAAAGCCACTGTTCTAA.....................................................................................2111.00100000000000001000
...........................................................................................................................TAAAAGCCACTGTTCTAAGACT.................................................................................2211.00101000000000000000
................................................................................TTAGAATAGGGGAGCTTAACTTGGC.........................................................................................................................2511.00100000000000001000
.....................................................................................ATAGGGGAGCTTAAC..............................................................................................................................1511.00100000000001000000
........................................................................................................................AGTTAAAAGCCACTGTTCTA......................................................................................2011.00100001000000000000
................................................................................TTAGAATAGGGGAGC...................................................................................................................................1521.00200000000002000000
................................................................................TTAGAATAGGGGAGCTTAACTTAGC.........................................................................................................................2511.00100000000000001000
................................................................................TTAGAATAGGGGAGCTTAACAGC...........................................................................................................................2311.00100000000000001000
...............................................................................CTTAGAATAGGGGAGCTTAACTT............................................................................................................................2311.00100000000001000000
.................................................................................TAGAATAGGGGAGCTTAACTTGAA.........................................................................................................................2411.00100000000000001000
..........................................................................................................................TTAAAAGCCACTGTTCTAAGT...................................................................................2111.00101000000000000000
.............................................................AATCTTGGTCCAACTTGCC..................................................................................................................................................1911.00100000000000100000
................................................................................TTAGAATAGGGGAGCTTTTA..............................................................................................................................2060.67400000000000004000
................................................................................TTAGAATAGGGGAGCTTAAAAA............................................................................................................................2230.33100000000000001000
droSec2
ATGTGGTT-------ATG-----------A------TA-----AGTCAA--------TCAAAATCTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGT--TTTTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATC-------------------A--------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................221573.00573224804427
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................211550.00550164802331
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................20150.005034322
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................23142.004213641
..............................................................ATCTTGGTCCAACTTGCC..................................................................................................................................................18134.003400331
.........................................................................................................................GTTAAAAGCCACTGTTCTAAGA...................................................................................2217.0070421
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................1917.0070700
.........................................................................................................................GTTAAAAGCCACTGTTCTAAG....................................................................................2116.0063300
.................................................................................TAGAATAGGGGAGCTTAACTTG...........................................................................................................................2214.0040400
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................2113.0031200
.............................................................AATCTTGGTCCAACTTGCC..................................................................................................................................................1912.0020020
................................................................................TTAGAATAGGGGAGCTTAACTTA...........................................................................................................................2312.0020200
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................2012.0020200
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................2112.0020200
................................................................................TTAGAATAGGGGAGCTTAACTC............................................................................................................................2212.0020200
................................................................................TTAGAATAGGGGAGCTTAAT..............................................................................................................................2011.0010100
.................................................................................TAGAATAGGGGAGCTTAACTTT...........................................................................................................................2211.0010100
....................................................................................AATAGGGGAGCTTAACTTT...........................................................................................................................1911.0010100
..............................................................ATCTTGGTCCAACTTGCT..................................................................................................................................................1811.0010010
............................................................AAATCTTGGTCCAACTTGCC..................................................................................................................................................2011.0010010
..................................................................................AGAATAGGGGAGCTTAACT.............................................................................................................................1911.0010100
..........................................................................................................................TTAAAAGCCACTGTTCTAAGA...................................................................................2111.0010100
................................................................................TTAGAATAGGGGAGCTTAACTTGTG.........................................................................................................................2511.0010100
droYak3
CTATGATC-----------------------------------AATCAA--------TG-AAATCTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--ATATCATGTATAAGTTAAGAACCTTTATTCTAAGACAATTCGACTACAAAATCAACTGAAAAACTACT--------------TCAACTTGTTTTATTTTGAAACTTATTAGA-AATTASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................211518.00518209504124650030
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................221448.004481116101254002010
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................20142.0042311000370000
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................23130.0030001001280000
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................21117.0017010003130000
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................20117.0017210000140000
.................................................................................TAGAATAGGGGAGCTTAACTTA...........................................................................................................................22114.0014000000140000
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................19110.001001000090000
..................................................................................AGAATAGGGGAGCTTAACTTT...........................................................................................................................2117.00700000070000
..................................................................................AGAATAGGGGAGCTTAACTT............................................................................................................................2013.00300000030000
................................................................................TTAGAATAGGGGAGCTTAACTC............................................................................................................................2213.00320000010000
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................1813.00310000200000
.................................................................................TAGAATAGGGGAGCTTAACTTT...........................................................................................................................2212.00200000020000
...............................................................................CTTAGAATAGGGGAGCTTAACTT............................................................................................................................2312.00200000020000
..................................................................................AGAATAGGGGAGCTTAACTTAT..........................................................................................................................2212.00200000020000
................................................................................TTAGAATAGGGGAGCTTAACTTA...........................................................................................................................2312.00200000020000
.........................................................................................................................GTTAAGAACCTTTATTCTAA.....................................................................................2012.00220000000000
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................2111.00100000010000
................................................................................TTAGAATAGGGGAGCTTAACTTTA..........................................................................................................................2411.00100000010000
.................................................................................TAGAATAGGGGAGCTTAACA.............................................................................................................................2011.00100000010000
.........................................................................................................................GTTAAGAACCTTTATTCT.......................................................................................1811.00110000000000
........................................................................................................................AGTTAAGAACCTTTATTCT.......................................................................................1911.00100001000000
...................................................................................GAATAGGGGAGCTTAACTT............................................................................................................................1911.00100000010000
................................................................................TTAGAATAGGGGAGCTTAACTA............................................................................................................................2211.00100000010000
................................................................................TTAGAATAGGGGAGCTTAACTTC...........................................................................................................................2311.00110000000000
..................................................................................AGAATAGGGGAGCTTAACT.............................................................................................................................1911.00100000010000
................................................................................TTAGAATAGGGGAGCTTAACC.............................................................................................................................2111.00110000000000
.........................................................TG-AAATCTTGGTCCCACTTGTC..................................................................................................................................................2211.00100000010000
droEre2
AGTTGGTT-------ACATCCTTGC-----GTTAGT--GAT-CAATCAA--------TA-ACGTTTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTGTGT--GTGTTATGCTTAAGTTAAGAGCCTTTATTCTAAGTCAATTCGACTGCC-------------------A--------------AC----------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
................................................................................TTAGAATAGGGGAGCTTAACT.............................................................................................................................2112600.00260012221123871770
................................................................................TTAGAATAGGGGAGCTTAACTT............................................................................................................................2212242.00224229125220181670
................................................................................TTAGAATAGGGGAGCTTAACTTT...........................................................................................................................231361.003610030337210
................................................................................TTAGAATAGGGGAGCTTAAC..............................................................................................................................201275.002750000264110
.........................................................................................................................GTTAAGAGCCTTTATTCTAAGT...................................................................................221142.00142111013450
................................................................................TTAGAATAGGGGAGCTTAA...............................................................................................................................19163.006300105840
..........................................................................................................................TTAAGAGCCTTTATTCTAAGT...................................................................................21142.004200003930
.................................................................................TAGAATAGGGGAGCTTAACTT............................................................................................................................21111.00115000600
................................................................................TTAGAATAGGGGAGCTTAACA.............................................................................................................................2118.0080000710
................................................................................TTAGAATAGGGGAGCTTA................................................................................................................................1817.0070000610
.........................................................................................................................GTTAAGAGCCTTTATTCTAA.....................................................................................2017.0070000610
.................................................................................TAGAATAGGGGAGCTTAACT.............................................................................................................................2016.0061000500
................................................................................TTAGAATAGGGGAGCTTAAA..............................................................................................................................2015.0050000500
..........................................................................................................................TTAAGAGCCTTTATTCTAAGTT..................................................................................2214.0040000400
..........................................................................................................................TTAAGAGCCTTTATTCTAAG....................................................................................2014.0040000310
................................................................................TTAGAATAGGGGAGCTTAACTA............................................................................................................................2213.0030000300
................................................................................TTAGAATAGGGGAGCTTAACTTA...........................................................................................................................2313.0030000210
...............................................................................CTTAGAATAGGGGAGCTTAACTT............................................................................................................................2313.0031000110
................................................................................TTAGAATAGGGGAGCTTAT...............................................................................................................................1913.0030000300
................................................................................TTAGAATAGGGGAGCTTAACTTC...........................................................................................................................2312.0020000200
..........................................................................................................................TTAAGAGCCTTTATTCTAAGTA..................................................................................2212.0020000200
.........................................................................................................................GTTAAGAGCCTTTATTCTAAGTT..................................................................................2312.0020000200
.........................................................................................................................GTTAAGAGCCTTTATTCTAAGA...................................................................................2212.0020000200
................................................................................TTAGAATAGGGGAGCTTATT..............................................................................................................................2012.0020000200
................................................................................TTAGAATAGGGGAGCTTAACTTG...........................................................................................................................2312.0020000110
.........................................................................................................................GTTAAGAGCCTTTATTCTAAGC...................................................................................2212.0020000200
.........................................................................................................................GTTAAGAGCCTTTATTCTAAG....................................................................................2111.0010000100
........................................................................................................................AGTTAAGAGCCTTTATTCTAAG....................................................................................2211.0010000100
................................................................................TTAGAATAGGGGAGCTTT................................................................................................................................1811.0010000100
............................................................ACGTTTTGGTCCCACTTGTC..................................................................................................................................................2011.0010000010
................................................................................TTAGAATAGGGGAGCTTAACTTAA..........................................................................................................................2411.0010000100
...........................................................................................................................TAAGAGCCTTTATTCTAAGT...................................................................................2011.0010000100
......................................................................................TAGGGGAGCTTAACTTGTGT--GTGTT.................................................................................................................2511.0010000100
...........................................................................................................................TAAGAGCCTTTATTCTAAGTTT.................................................................................2211.0010000100
................................................................................TTAGAATAGGGGAGCTTAACTC............................................................................................................................2211.0010000010
.............................................................CGTTTTGGTCCCACTTGTC..................................................................................................................................................1911.0010000010
..................................................................................AGAATAGGGGAGCTTAACTT............................................................................................................................2011.0010000100
................................................................................TTAGAATAGGGGAGCTTAACTCT...........................................................................................................................2311.0010000100
..........................................................A-ACGTTTTGGTCCCACTTGTC..................................................................................................................................................2111.0010000100
.................................................................................TAGAATAGGGGAGCTTAA...............................................................................................................................1811.0011000000
.................................................................................TAGAATAGGGGAGCTTAAC..............................................................................................................................1911.0011000000
................................................................................TTAGAATAGGGGAGCTTAAAA.............................................................................................................................2120.5010000100

Generated: 10/20/2015 at 07:38 PM