ID:

dmo_329

 Coordinate:

scaffold_6376:43959-44011 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Helitron-1_DVirRCHelitron+
mature
  1. dmo_329  scaffold_6376:43960-43984 -
  2. scaffold_6482:265120-265144 +
  3. scaffold_6482:625784-625808 -
  4. scaffold_6500:28291713-28291737 -
star

Sense Strand Reads

CCATCGGGTAAATTTTCTAATTGTTGTCTAGACTTAAGCATTCTAACCCGATGCTCTGGCAATGAAGTATTAATATATACTTCAGCGTTACTGCTTTCGGACAAATGCATACCTAAACAGCAGTAAACGGCTTCTTGGGCAGATATTTCAGTG
***********************************..(((((.....((((.((..((((..((((((((......))))))))..))))..))..))))...)))))..........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body		 V041
embryo
 V049
head
 V056
head
.........................................................................................................TGCATACCTAAACAGCAGTAAACGGC...................... 26 0 4 211.25 845 561 281 2 1 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGAC................................................... 25 0 4 57.00 228 46 175 3 3 1 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACAAA................................................ 28 0 4 40.75 163 3 158 2 0 0 0
.........................................................................................................TTCATACCTAAACAGCAGTAAACGGC...................... 26 1 4 39.25 157 157 0 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGGCT..................... 27 0 4 27.75 111 43 62 5 1 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGG....................... 25 0 5 22.00 110 3 106 0 1 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACA.................................................. 26 0 4 16.50 66 2 62 0 1 1 0
......................................................................TAATATATACTTCAGCGTTACTGC........................................................... 24 0 2 11.50 23 21 0 0 2 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGA.................................................... 24 0 5 11.20 56 6 46 3 1 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACAA................................................. 27 0 4 9.50 38 1 37 0 0 0 0
.........................................................................................................TGAATACCTAAACAGCAGTAAACGGC...................... 26 1 4 7.00 28 28 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGG..................................................... 23 0 5 6.20 31 1 30 0 0 0 0
..........................................................................................................GCATACCTAAACAGCAGTAAACGGC...................... 25 0 4 6.00 24 3 21 0 0 0 0
.........................................................................................................TGCTTACCTAAACAGCAGTAAACGGC...................... 26 1 4 5.25 21 21 0 0 0 0 0
.........................................................................................................TTCATACCTAAACAGCAGTAAACGGCT..................... 27 1 4 4.25 17 17 0 0 0 0 0
......................................................................TAATATATACTTCAGCGTTACTGCTT......................................................... 26 0 2 4.00 8 2 6 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGGCC..................... 27 1 4 3.50 14 14 0 0 0 0 0
......................................................................TAATATATACTTCAGCGTTACTGCT.......................................................... 25 0 2 3.00 6 1 5 0 0 0 0
.........................................................................................................TTAATACCTAAACAGCAGTAAACGGC...................... 26 2 4 2.25 9 9 0 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGAC...................... 26 1 4 2.00 8 8 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACAAAA............................................... 29 1 4 2.00 8 1 7 0 0 0 0
..........................................................................................................GCATACCTAAACAGCAGTAAACGG....................... 24 0 5 1.80 9 0 9 0 0 0 0
............................................................................................................ATACCTAAACAGCAGTAAACGGC...................... 23 0 4 1.50 6 6 0 0 0 0 0
.........................................................................................................TTCTTACCTAAACAGCAGTAAACGGC...................... 26 2 4 1.50 6 6 0 0 0 0 0
.....................................................................TTAATATATACTTCAGCGTTACTGC........................................................... 25 0 2 1.50 3 2 1 0 0 0 0
..............................................................................ACTTCAGCGTTACTGCTTTCGGAC................................................... 24 0 5 1.40 7 0 7 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACG........................ 24 0 5 1.40 7 0 7 0 0 0 0
........................................................................................................CTGCATACCTAAACAGCAGTAAACGGC...................... 27 1 4 1.25 5 4 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGTC...................... 26 1 4 1.25 5 4 1 0 0 0 0
..............................................................................ACTTCAGCGTTACTGCTTTCGGACAAA................................................ 27 0 5 1.20 6 0 6 0 0 0 0
.........................................................................................................TTCATACCTAAACAGCAGTAAACGAC...................... 26 2 4 1.00 4 4 0 0 0 0 0
.......................................................................AATATATACTTCAGCGTTACTGC........................................................... 23 0 2 1.00 2 0 2 0 0 0 0
.........................................................................................................TACATACCTAAACAGCAGTAAACGGC...................... 26 1 4 1.00 4 4 0 0 0 0 0
...................................................................TATTAATATATACTTCAGCGTTACTGC........................................................... 27 0 2 1.00 2 2 0 0 0 0 0
.........................................................................................................TGCATACCTACACAGCAGTAAACGGC...................... 26 1 4 1.00 4 4 0 0 0 0 0
................................................................................TTCAGCGTTACTGCTTTCGGACAAA................................................ 25 0 5 1.00 5 0 4 1 0 0 0
....................................................................ATTAATATATACTTCAGCGTTACTGC........................................................... 26 0 2 1.00 2 2 0 0 0 0 0
.........................................................................................................TGCTTACCTAAACAGCAGTAAACGGCT..................... 27 1 4 1.00 4 4 0 0 0 0 0
..........................................................................................................GCATACCTAAACAGCAGTAAACGGCT..................... 26 0 4 1.00 4 0 4 0 0 0 0
.........................................................................................................TGCATACCGAAACAGCAGTAAACGGC...................... 26 1 5 0.80 4 4 0 0 0 0 0
.........................................................................................................TTCATACCTAAACAGCAGTAAACGGCC..................... 27 2 4 0.75 3 3 0 0 0 0 0
.............................................................................TAATTCAGCGTTACTGCTTTCGGAC................................................... 25 1 4 0.75 3 3 0 0 0 0 0
.........................................................................................................TCCATACCTAAACAGCAGTAAACGGC...................... 26 1 4 0.75 3 3 0 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGGCTA.................... 28 1 4 0.75 3 1 1 1 0 0 0
.........................................................................................................TGCATACCTAAGCAGCAGTAAACGGC...................... 26 1 4 0.75 3 0 3 0 0 0 0
..............................................................................ACTTCAGCGTTACTGCTTTCGGA.................................................... 23 0 6 0.67 4 0 4 0 0 0 0
..............................................................................ACTTCAGCGTTACTGCTTTCGGACA.................................................. 25 0 5 0.60 3 0 3 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGAAAACGGC...................... 26 1 4 0.50 2 2 0 0 0 0 0
..................................................................GTATTAATATATACTTCAGCGTTACTGC........................................................... 28 0 2 0.50 1 1 0 0 0 0 0
...........................................................................TATACTTCAGCGTTACTGCTTTCGGAA................................................... 27 1 4 0.50 2 0 2 0 0 0 0
.............................................................................................................TACCTAAACAGCAGTAAACGGCT..................... 23 0 4 0.50 2 1 1 0 0 0 0
......................................................................TAATATATACTTCAGCGTTACTAC........................................................... 24 1 2 0.50 1 1 0 0 0 0 0
................................................................................................................CTAAACAGCAGTAAACGGC...................... 19 0 4 0.50 2 1 1 0 0 0 0
......................................................................GAATATATACTTCAGCGTTACTGC........................................................... 24 1 2 0.50 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACAAT................................................ 28 1 4 0.50 2 1 1 0 0 0 0
.................................................................................................................TAAACAGCAGTAAACGGC...................... 18 0 4 0.50 2 0 2 0 0 0 0
.....................................................................TTAATGTATACTTCAGCGTTACTGC........................................................... 25 1 2 0.50 1 1 0 0 0 0 0
.........................................................................................................TGTATACCTAAACAGCAGTAAACGGC...................... 26 1 4 0.50 2 2 0 0 0 0 0
..........................................................................ATATACTTCAGCGTTACTGC........................................................... 20 0 4 0.50 2 2 0 0 0 0 0
.............................................................................TTCTTCAGCGTTACTGCTTTCGGAC................................................... 25 1 4 0.50 2 2 0 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGGCTTC................... 29 0 4 0.50 2 1 1 0 0 0 0
...........................................................................................................CATACCTAAACAGCAGTAAACGGC...................... 24 0 4 0.50 2 2 0 0 0 0 0
.........................................................................................................TTCATACCTACACAGCAGTAAACGGC...................... 26 2 4 0.50 2 2 0 0 0 0 0
......................................................................TAATATATACTTCAGCGTTACTG............................................................ 23 0 2 0.50 1 0 1 0 0 0 0
......................................................................TAAGATATACTTCAGCGTTACTGC........................................................... 24 1 2 0.50 1 1 0 0 0 0 0
..............................................................................ACTTCAGCGTTACTGCTTTCGG..................................................... 22 0 6 0.50 3 0 3 0 0 0 0
.........................................................................................................TGCATGCCTAAACAGCAGTAAACGGC...................... 26 1 4 0.50 2 2 0 0 0 0 0
.........................................................................................................TGCACACCTAAACAGCAGTAAACGGC...................... 26 1 4 0.50 2 2 0 0 0 0 0
.........................................................................................................TGCATACATAAACAGCAGTAAACGGC...................... 26 1 4 0.50 2 2 0 0 0 0 0
.........................................................................................................TGCATACCTAAACGGCAGTAAACGGC...................... 26 1 4 0.50 2 1 1 0 0 0 0
.........................................................................TATATACTTCAGCGTTACTGCTTTCGGA.................................................... 28 0 4 0.50 2 0 2 0 0 0 0
.....................................................CTCTGGCAATGAAGTATTAATATATAC......................................................................... 27 0 2 0.50 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCG...................................................... 22 0 5 0.40 2 0 2 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGT............................. 19 0 5 0.40 2 0 2 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAAC......................... 23 0 5 0.40 2 1 1 0 0 0 0
...............................................................................CTTCAGCGTTACTGCTTTCGGAC................................................... 23 0 5 0.40 2 0 2 0 0 0 0
............................................................................ATACTTCAGCGTTACTGCTTTCGGAC................................................... 26 0 3 0.33 1 0 1 0 0 0 0
...........................................................................TATACTTCAGCGTTACTGCTTTCGGAC................................................... 27 0 3 0.33 1 1 0 0 0 0 0
......................................................TCTGGCAATGAAGTATTAATA.............................................................................. 21 0 3 0.33 1 0 1 0 0 0 0
..................................................ATGCTCTGGCAATGAAGTATTAAT............................................................................... 24 0 3 0.33 1 0 1 0 0 0 0
.............................................................................TGCTTCAGCGTTCCTGCTTTCGGAC................................................... 25 2 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCATACATACACAGCAGTAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACATT................................................ 28 2 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGGATACCTAAACAGCAGTAAACGGCT..................... 27 1 4 0.25 1 1 0 0 0 0 0
......................................................................TTATATATACTTCAGCGTTACTGC........................................................... 24 1 4 0.25 1 1 0 0 0 0 0
..............................................................................................TTTCGGACAAATGCATACCTAAACAC................................. 26 1 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACT.................................................. 26 1 4 0.25 1 0 1 0 0 0 0
.........................................................................................................GGCATACCTAAACAGCAGTAAACGGC...................... 26 1 4 0.25 1 0 1 0 0 0 0
.............................................................................TAGTTCAGCGTTACTGCTTTCGGAC................................................... 25 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TTCATACCTAAACAGTAGTAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
..........................................................................ATATACTTCAGCGTTACTGCT.......................................................... 21 0 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGCC...................... 26 1 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGCAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCATACCTAAACACCAGTAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
........................................................................................................CTGCATACCTAAACAGCGGTAAACGGC...................... 27 2 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAACCGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................TACCTAAACAGCAGTAAACGGC...................... 22 0 4 0.25 1 0 1 0 0 0 0
.................................................................................................................TAAACAGCAGTAAACGAC...................... 18 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCATACTTAAACAGCAGTAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TTGATACCTAAACAGCAGTAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
............................................................................................................GACCCTAAACAGCAGTAAACGGC...................... 23 3 4 0.25 1 1 0 0 0 0 0
...............................................................................................TTCGGACAAATGCATACCTAAACA.................................. 24 0 4 0.25 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGCTACTGCTTTCGGAC................................................... 25 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGGATACCTAAACAGCAGTAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TTCTTACCTAAACAGCAGTAAACGGCC..................... 27 3 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCTTACCTAAACAGCAGTGAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TTCATACCTACACAGCAGTAACCGGC...................... 26 3 4 0.25 1 1 0 0 0 0 0
............................................................................ATACTTCAGCGGTACTGCTTTCGG..................................................... 24 1 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATTCCTAAACAGCAGTAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
..............................................................................................................ACCTAAACAGCAGTAAACGGCTTC................... 24 0 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCTTACCTAAACAGCAGTAAACGTC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.............................................................................TGCTTCAGCGTTACTGCTTTCGGAC................................................... 25 1 4 0.25 1 1 0 0 0 0 0
..........................................................................ATATACTTCAGCGTTACTGCTT......................................................... 22 0 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCCTTCGGACAAA................................................ 28 1 4 0.25 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGTTACGGCTTTCGGACA.................................................. 26 1 4 0.25 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGTGACTGCTTTCGGACAA................................................. 27 1 4 0.25 1 0 1 0 0 0 0
................................................................................................TCGGACAAATGCATACCTAAACAGC................................ 25 0 4 0.25 1 0 1 0 0 0 0
.............................................................................TGCTTCAGCGTTACTGCTTTCGGACAA................................................. 27 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGAATACCTAAACAGCAGTAAACGGCT..................... 27 1 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTAGGAC................................................... 25 1 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCGGCGTTACTGCTTTCGGACA.................................................. 26 1 4 0.25 1 0 0 1 0 0 0
........................................................................................................CTCCATACCTAAACAGCAGTAAACGGC...................... 27 2 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAACGTTACTGCTTTCGGACAAA................................................ 28 1 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAAAGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCTTTACTGCTTTCGGAC................................................... 25 1 4 0.25 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGTGACTGCTTTCGGACAAA................................................ 28 1 4 0.25 1 0 1 0 0 0 0
............................................................................................................AGACCTAAACAGCAGTAAACGGC...................... 23 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................GTCATACCTAAACAGCAGTAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TTCATACCTAAACAGCAGTAAGCGTC...................... 26 3 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGGCG..................... 27 1 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAACAGTAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
................................................................................................................CTAAACAGCAGTAAACGGCT..................... 20 0 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTAACTGCTTTCGGAC................................................... 25 1 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAGACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
...............................................................................................................CCTAAACAGCAGTAAACGGC...................... 20 0 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTCACTGCTTTCGGAC................................................... 25 1 4 0.25 1 0 1 0 0 0 0
..........................................................................................................GGATACCTAAACAGCAGTAAACGGC...................... 25 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGGATACCTAAACAGCAGTAAACGGCC..................... 27 2 4 0.25 1 1 0 0 0 0 0
............................................................................CTACTTCAGCGTTACTGCTTTCGGACA.................................................. 27 1 4 0.25 1 0 1 0 0 0 0
..................................TAAGCATCCTAACCCGATGCTCTGGCATT.......................................................................................... 29 2 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TTTATACCTAAACAGCAGTAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.....................................................................................................CAAATGCATACCTAAACAGCAGTAAACGG....................... 29 0 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGTAGTAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCATACCTGAACAGCAGTAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCATACCTACACAGCAGCAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
..........................................................................................................GCAAACCTAAACAGCAGTAAACGGC...................... 25 1 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACC.................................................. 26 1 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTATCGGACAAA................................................ 28 1 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TTCATACCTAAAAAGCAGTAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCATACATAAACAGCAGTAACCGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.............................................................................TTCTTCAGCGTTACTGCTTTCGGACAAA................................................ 28 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGCTTACATTAACAGCAGTAAACGGC...................... 26 3 4 0.25 1 1 0 0 0 0 0
..............................................................................................TTTCGGACAAATGCATACCTAAACAG................................. 26 0 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACTGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACTT................................................. 27 2 4 0.25 1 0 1 0 0 0 0
.............................................................................................................................AACGGCCTCTAGTGCAGAT......... 19 3 16 0.25 4 0 2 0 0 1 1
.........................................................................................................TGCATACCTAGACAGCAGTAAACGGC...................... 26 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGATTACCTAAACAGCAGTAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTGACCGCTTTCGGAC................................................... 25 2 4 0.25 1 0 1 0 0 0 0
...........................................................................TATACTTCAGCGTTACTGCTTTCGGA.................................................... 26 0 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTCAACGGC...................... 26 1 4 0.25 1 0 0 0 1 0 0
.............................................................................TACTTCAGCGTTGCTGCTTTCGGAC................................................... 25 1 4 0.25 1 0 1 0 0 0 0
..........................................................................................................GCGTACCTAAACAGCAGTAAACGGC...................... 25 1 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACATAAACAGCGGTAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
...............................................................................................TTCGGACAAATGCATACCTAAACAGCAG.............................. 28 0 4 0.25 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAGCGGC...................... 26 1 4 0.25 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGACAG................................................. 27 1 4 0.25 1 0 1 0 0 0 0
.............................................................................TGCTTCAGCGTTACTGCTTTCGGACAAA................................................ 28 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TGAATACCTAAACAGCAGGAAACGGC...................... 26 2 4 0.25 1 1 0 0 0 0 0
.............................................................................TACGTCAGCGTTACTGCTTTCGGAC................................................... 25 1 4 0.25 1 1 0 0 0 0 0
..........................................................................................................GCATACCTAAACAGCAGTAAACG........................ 23 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGGAAACGG....................... 25 1 5 0.20 1 1 0 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACAGC...................... 26 1 5 0.20 1 0 1 0 0 0 0
........................................................................................................GTGCATACCTAAACAGCAGTAAACGG....................... 26 1 5 0.20 1 0 1 0 0 0 0
..........................................................................................................GCATACCTAAACAGCAGT............................. 18 0 5 0.20 1 0 1 0 0 0 0
.........................................................................TATTTACTTCAGCGTTACT............................................................. 19 1 5 0.20 1 1 0 0 0 0 0
.................................................................................TCAGCGTTACTGCTTTCGGACAAATGCA............................................ 28 0 5 0.20 1 0 1 0 0 0 0
.............................................................................TACTTCAGAGTTACTGCTGTCGGA.................................................... 24 2 5 0.20 1 1 0 0 0 0 0
...............................................................................CTTCAGCGTTACTGCTTTCGGACAAAT............................................... 27 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................TGCTTACCTAAACAGCAGTAAACGG....................... 25 1 5 0.20 1 1 0 0 0 0 0
.................................................................................TCAGCGTTACTGCTTTCGGAC................................................... 21 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................CCTAAACAGCAGTAAACGG....................... 19 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGTAAACGGGT..................... 27 1 5 0.20 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTC....................................................... 21 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................TTCTTACCTAAACAGCAGTAAACGG....................... 25 2 5 0.20 1 1 0 0 0 0 0
.................................................................................TCAGCGTTACTGCTTTCGGACAAA................................................ 24 0 5 0.20 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGTGACTGCTTTCGG..................................................... 23 1 5 0.20 1 0 1 0 0 0 0
.............................................................................................................TACCTAAACAGCAGTAAAC......................... 19 0 5 0.20 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGC.................................................... 24 1 5 0.20 1 0 1 0 0 0 0
................................................................................................................CTAAACAGCAGTAAACGG....................... 18 0 5 0.20 1 0 1 0 0 0 0
..........................................................................................................GCATACCGAAACAGCAGTAAACGGC...................... 25 1 5 0.20 1 1 0 0 0 0 0
.........................................................................................................TGCATACCGAAACAGCAGTAAACGGCT..................... 27 1 5 0.20 1 1 0 0 0 0 0
..........................................................................................................GCATACCTAAACAGCAGTA............................ 19 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................TGCATACCCAAACAGCAGTAAACGGC...................... 26 1 5 0.20 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAGCAGCAGTAAACGG....................... 25 1 5 0.20 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGAG................................................... 25 1 5 0.20 1 0 1 0 0 0 0
...............................................................................CTTCAGCGTTACTGCTTTCGGACAAA................................................ 26 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................TGCATACCTAAACAGCAGC............................. 19 1 5 0.20 1 1 0 0 0 0 0
............................................................................................................ATACCTAAACAGCAGTAAACGG....................... 22 0 5 0.20 1 0 1 0 0 0 0
..................................................................................CAGCGTTACTGCTTTCGGACA.................................................. 21 0 5 0.20 1 1 0 0 0 0 0
..................................................................................CAGCGTTACTGCTTTCGGAC................................................... 20 0 5 0.20 1 1 0 0 0 0 0
.........................................................................................................TTCATACCTAAACAGCAGTAAACTC....................... 25 3 5 0.20 1 1 0 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGATAAAA............................................... 29 2 5 0.20 1 0 1 0 0 0 0
................................................................................TTCAGCGTTACTGCTTTCGGACA.................................................. 23 0 5 0.20 1 0 1 0 0 0 0
.............................................................................................CTTTCGGACAAATGCATACC........................................ 20 0 5 0.20 1 1 0 0 0 0 0
......................................................................................GTTACTGCTTTCGGACAAA................................................ 19 0 5 0.20 1 0 1 0 0 0 0
.............................................................................TACTTCAGCGTTACTGCTTTCGGAA................................................... 25 1 5 0.20 1 0 1 0 0 0 0
.........................................................................................................TACATACCTAAACAGCAGTAAACG........................ 24 1 5 0.20 1 1 0 0 0 0 0
...............................................................................GATCAGCGTCACTGCTTTCGGA.................................................... 22 3 6 0.17 1 1 0 0 0 0 0

Anti-sense strand reads

GGTAGCCCATTTAAAAGATTAACAACAGATCTGAATTCGTAAGATTGGGCTACGAGACCGTTACTTCATAATTATATATGAAGTCGCAATGACGAAAGCCTGTTTACGTATGGATTTGTCGTCATTTGCCGAAGAACCCGTCTATAAAGTCAC
***********************************..(((((.....((((.((..((((..((((((((......))))))))..))))..))..))))...)))))..........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
............................................................................................CGAAAGCCTGTTTACGTATGGAT...................................... 23 0 4 0.75 3 3 0 0
...........................................................................................ACGAAAGCCTGTTTACGTATGGAT...................................... 24 0 4 0.75 3 3 0 0
....................................................CGAGACAGTTACTTCATAATTATATATG......................................................................... 28 1 2 0.50 1 0 1 0
....................................................CGAGACCGTTACTTCATAATTATATAT.......................................................................... 27 0 2 0.50 1 1 0 0
..............................................................ACTTCATAATTATATATGAAGTCGC.................................................................. 25 0 2 0.50 1 1 0 0
.............................................................................................GAAAGCCTGTTTACGTATGGATTTGT.................................. 26 0 4 0.25 1 1 0 0
..........................................................................................GACGAAAGCCTGTTTACGTATGGAT...................................... 25 0 4 0.25 1 1 0 0
.........................................................................................AAACGAAAGCCTGTTTACGTATGGAT...................................... 26 2 4 0.25 1 0 1 0
............................................................................................CGAAAGCCTGTTTACGTATGGATTTG................................... 26 0 4 0.25 1 1 0 0
................................................................................................AGCCTGTTTACGTATGGATTTGTC................................. 24 0 4 0.25 1 1 0 0
.........................................................................................TGACGAAAGCCTGTTTACGTATGGAT...................................... 26 0 4 0.25 1 0 1 0
.........TTTAAAAGGTTAACAACAGG............................................................................................................................ 20 2 8 0.25 2 0 2 0
...............................................................................GAAGTCGCAATGACGAAAGCCTGTTTA............................................... 27 0 5 0.20 1 1 0 0
.........................................................................................................ACGTATGGATTTGTCGTC.............................. 18 0 5 0.20 1 0 1 0
....................................................................................CGCAATGACGAAAGCCTGTTTACGT............................................ 25 0 5 0.20 1 1 0 0
...................................CTCGTAAGATGTGGCTACG................................................................................................... 19 3 9 0.11 1 1 0 0
..................................................................................................CCTGTTTAAGTCTGGATTG.................................... 19 3 11 0.09 1 0 0 1
.................................................................................AGTCTCAATGAGGAACGCC..................................................... 19 3 15 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6376:43909-44061 - dmo_329 CCATC------GGGTAAATTTTCTAATTGTTGTCTAGACTTAAGCATTCTAACCCGATGCTCTGGCAATGAAGTATTAATATATACTTCAGCGTTACTGCTTTCGGACAAATGCATACCTAAACAGCAGTAAACGGCTTCTTGGGCAGATATTTCAGTG
droVir3 scaffold_9738:10150-10302 + TCATC------GGGTAAATTTTACAACTGTTGCTTAGACTTCCTTAACCCAACCCGATTCTCTGGTAATGAGGTATTAATAAAAACCACTGCGTTACTGCTTTCGGACAAAGACATACCTAAACAGCAGTAAACGGCTTCCTGGGCGGATATTTCCGTA
droGri2 scaffold_15116:781489-781581 + ATTCG------A---------------------------------------------TTCTCG---GGTGATGTGTTAATTTAAAAATTACCATTCCTGGTTTCGAGCTCTCACAATCCCACACAATAATTTACGGCTTTCTAATCA------------
droWil2 scf2_1100000004891:4869-5021 + TCCTG------AGGCAAACTTTGCAATTGCTGTCTAGATTTGAGCATTTTAACTCGAAGATCTGGTAAACTAGTATTAATAAACTTATCTTTATGGCTTATATTAGACATTGACATCCCTAAACAGCAATAGGCAGCTTCCTGAGCAGAGATCTCAGTG
dp5 Unknown_singleton_1363:1196-1348 - TCATT------ATGCATATTTTGTAGGATGCTTGTGGATTTGAGCATTCGAACTCGTTGCTCTGGAGGGAAAGTATTTACTTGAACACATTTGTTGCTAGTTCCGGACAATGGAATGCCTAGACAACAATATACGGCTTCCTGAGCAGATATCTCAGTG
droPer2 scaffold_113:13841-13992 - TCCTG------ATGCATATTTTGTAGGATGCTTGTGGATTTGAGCATTCGAATTCGTTGCTCTGGAGGG-AAGTATTTACTTGAACACATTTGTTGCTAGTTCCGGACAACGGAATGCCTAGACAACAATATACGGCTTCCTGAGCAGATATCTCAGTG
droAna3 scaffold_13156:42449-42599 - TAGTT------TGGTAGTCGCTCTAATTCTTCATTTAAGCGAGCCAATCGAACTCGTTTGTCTGGATGGCAAGTGTTAATAAAAATTGTATCTTCACTTGTCTCCGACATATGCATACCCAAAATATTGAATGGTGCTTCTTGGGCTGATATT--AGCG
droBip1 scf7180000395377:16352-16503 - TTGTT------TGGTAGAAT-TCTAATTCCTCATTTGAGCGAGCCAATCTAACTCGTTTGTCTGGATGGCAAGTGTTTATAAAAATAGTACCTTTACTTGCCTCTGACATATGCAGACCCAAAATATTGTAAGCTGCTTCTTGGGCTGATATTTCTGTA
droKik1 scf7180000302351:1132165-1132316 + TTCCC------AGGAAGCTGCTCTAATTCTCTATTAGATCGCACTATCCGAACTCTTTTATCTGGATGGCAAGTGTTTACAA-AATATTTCCTTCACTTGCCTCAGACATGTGTAAGCCTAAAATGTTGTAGGCTGCTTCTTGGGCTGATATTTCCGTA
droFic1 scf7180000452149:6720-6872 + TCTCC------TGGAAGATGTTCTAGTTCTCTGTTGGATCGAACTATGCGAACTCTTTTATCTGGATGGCAAGTGTTTATAAAAATATTTCCTTCACTAGCCTCAGACATGTGTAAGCCTAAAATATTGTAGGCAGCTTCTTGGGCTGATATCTCCGTA
droEle1 scf7180000491284:66708-66860 - TTGTC------AGGAAGCTGAGCTAGTTCCTTATTAGATCGTACTATCCGCACTCTTTTATCTGGATGGCAAGTGTCAATACAAATATTTCATTCGCTAGCCTCTAAAATGTGTAACCCCAAAATGTTGTAAGCTGCTTCTTGGGCAGATATCTCCGTA
droRho1 scf7180000776588:8144-8296 + TCTGA------GGGCAATCGCTCCAAATCCTTTTTTGACTTGACCATTCGTACTCTTTGCTCAGGAAGCGATGTATTTTTGAACATGCTTCCGTTACTGGTTTCTGACAAATGTAGCCCTAAAATACTGTAAACAGCTTCCTGAGCCGATTTTTCGGTT
droBia1 scf7180000302044:22512-22663 + TTCAA------AGGCATATTTTGCAGAATGCTTGTAGGTCCAAGCATACGAACTCGTTGTTCTGGAGGGAAGGTGTTGATATGAATTG-ATTATTGCTTGTTTCAGACAACGTCAATCCCAGACAACAATATACGGCCTCCTGAGCAGAGATCTCAGTA
droTak1 scf7180000414209:4056-4208 + TCTAA------GGGCAGTCGCTCCAACTCCTTTTTTGACTTGACCATTCGGACTCTTTGCTCAGGAAGTGATGTATTTATAAACTTGCTTCCGTTACTGGTTTCTGACAAATGCAGCCCCAAAATATTGTAAACAGCTTCCTGGGCTGATATTTCGGTT
droEug1 scf7180000405531:1786-1938 + TTCGA------AGGCATATTTTGAAGGTCGCGTGTAGGTTTTAACATACGAACTCGTTGTTCTGGAGGGAAGGTGTTAATGTAAACGCATTTATTACTAGTTTCCGATAACGCCATTCCCAGACAACAATATACGGCTTCCTGAGCTGATATCTCAGTG
dm3 chr3L:23630648-23630674 + ------------------------------------------------------------------------------------------------------------------------------------ACGGCTTCCTAGGCAGATATCTGAGTG
droSim2 node_23650:147-299 + TTCTG------AGGCATATTTTGAAGGTCGCGTGTAGGTCTAAGCATACGAACTCGTTGTTCTGGAGGGAAGGTGTTGATATGAACGCACTTATTACTTGCTTCGGACAACGCCATTCCCAGACAACAATACACGGCTTCCTGAGCAGAAATCTCAGTG
droYak3 v2_chrUn_6268:4317-4469 - TTCTG------AGGCATATTTTGAAGGTCGCGTGTAGGTCTAAGCATACGAACTCGTTGTTCTGGAGAGAAGGTGTTGATATGAACGCACTTATTACTTGCTTCGGACAACGCCATTCCCAGACAACAATACACGGCTTCCTGAGCAGATATCTCAGTG
droEre2 scaffold_4929:22478314-22478445 - GTGGAATTCCGAGGCATATTTAAAAGG-------------------------TCCAGTGTTCTGGAAGGAAGGTGTTTATATACA--CACCTAGTACTAGTTTCTGACAACGCCATTCACAGACAATAATATACGGTTTCCTCAGTAGATATCTCAGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCATC------GGGTAAATTTTCTAATTGTTGTCTAGACTTAAGCATTCTAACCCGATGCTCTGGCAATGAAGTATTAATATATACTTCAGCGTTACTGCTTTCGGACAAATGCATACCTAAACAGCAGTAAACGGCTTCTTGGGCAGATATTTCAGTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................TGCATACCTAAACAGCAGTAAACGGC......................264211.258452811005612
...................................................................................TACTTCAGCGTTACTGCTTTCGGAC...................................................25457.00228175310463
...................................................................................TACTTCAGCGTTACTGCTTTCGGACAAA................................................28440.7516315800032
...............................................................................................................TGCATACCTAAACAGCAGTAAACGGCT.....................27427.7511162100435
...............................................................................................................TGCATACCTAAACAGCAGTAAACGG.......................25522.0011010610030
...................................................................................TACTTCAGCGTTACTGCTTTCGGACA..................................................26416.50666211020
............................................................................TAATATATACTTCAGCGTTACTGC...........................................................24211.50230200210
...................................................................................TACTTCAGCGTTACTGCTTTCGGA....................................................24511.20564610063
...................................................................................TACTTCAGCGTTACTGCTTTCGGACAA.................................................2749.50383700010
...................................................................................TACTTCAGCGTTACTGCTTTCGG.....................................................2356.20313000010
................................................................................................................GCATACCTAAACAGCAGTAAACGGC......................2546.00242100030
............................................................................TAATATATACTTCAGCGTTACTGCTT.........................................................2624.008600020
...............................................................................................................TGCATACCTAAACAGCAGTAAACGGCC.....................2743.50140000140
............................................................................TAATATATACTTCAGCGTTACTGCT..........................................................2523.006500010
...................................................................................TACTTCAGCGTTACTGCTTTCGGACAAAA...............................................2942.008700010
................................................................................................................GCATACCTAAACAGCAGTAAACGG.......................2451.809900000
..................................................................................................................ATACCTAAACAGCAGTAAACGGC......................2341.506000060
...........................................................................TTAATATATACTTCAGCGTTACTGC...........................................................2521.503100020
....................................................................................ACTTCAGCGTTACTGCTTTCGGAC...................................................2451.407700000
...............................................................................................................TGCATACCTAAACAGCAGTAAACG........................2451.407700000
....................................................................................ACTTCAGCGTTACTGCTTTCGGACAAA................................................2751.206600000
.............................................................................AATATATACTTCAGCGTTACTGC...........................................................2321.002200000
.........................................................................TATTAATATATACTTCAGCGTTACTGC...........................................................2721.002000020
......................................................................................TTCAGCGTTACTGCTTTCGGACAAA................................................2551.005400001
..........................................................................ATTAATATATACTTCAGCGTTACTGC...........................................................2621.002000020
................................................................................................................GCATACCTAAACAGCAGTAAACGGCT.....................2641.004400000
...............................................................................................................TGCATACCTAAACAGCAGTAAACGGCTA....................2840.753100011
....................................................................................ACTTCAGCGTTACTGCTTTCGGA....................................................2360.674400000
....................................................................................ACTTCAGCGTTACTGCTTTCGGACA..................................................2550.603300000
........................................................................GTATTAATATATACTTCAGCGTTACTGC...........................................................2820.501000010
.................................................................................TATACTTCAGCGTTACTGCTTTCGGAA...................................................2740.502200000
...................................................................................................................TACCTAAACAGCAGTAAACGGCT.....................2340.502100010
......................................................................................................................CTAAACAGCAGTAAACGGC......................1940.502100010
...................................................................................TACTTCAGCGTTACTGCTTTCGGACAAT................................................2840.502100010
.......................................................................................................................TAAACAGCAGTAAACGGC......................1840.502200000
................................................................................ATATACTTCAGCGTTACTGC...........................................................2040.502000020
...............................................................................................................TGCATACCTAAACAGCAGTAAACGGCTTC...................2940.502100010
.................................................................................................................CATACCTAAACAGCAGTAAACGGC......................2440.502000020
............................................................................TAATATATACTTCAGCGTTACTG............................................................2320.501100000
....................................................................................ACTTCAGCGTTACTGCTTTCGG.....................................................2260.503300000
...............................................................................TATATACTTCAGCGTTACTGCTTTCGGA....................................................2840.502200000
...........................................................CTCTGGCAATGAAGTATTAATATATAC.........................................................................2720.501000010
...................................................................................TACTTCAGCGTTACTGCTTTCG......................................................2250.402200000
...............................................................................................................TGCATACCTAAACAGCAGT.............................1950.402200000
...............................................................................................................TGCATACCTAAACAGCAGTAAAC.........................2350.402100010
.....................................................................................CTTCAGCGTTACTGCTTTCGGAC...................................................2350.402200000
..................................................................................ATACTTCAGCGTTACTGCTTTCGGAC...................................................2630.331100000
.................................................................................TATACTTCAGCGTTACTGCTTTCGGAC...................................................2730.331000010
............................................................TCTGGCAATGAAGTATTAATA..............................................................................2130.331100000
........................................................ATGCTCTGGCAATGAAGTATTAAT...............................................................................2430.331100000
...................................................................................TACTTCAGCGTTACTGCTTTCGGACATT................................................2840.251100000
....................................................................................................TTTCGGACAAATGCATACCTAAACAC.................................2640.251000010
...................................................................................TACTTCAGCGTTACTGCTTTCGGACT..................................................2640.251100000
................................................................................ATATACTTCAGCGTTACTGCT..........................................................2140.251100000
...................................................................................................................TACCTAAACAGCAGTAAACGGC......................2240.251100000
.....................................................................................................TTCGGACAAATGCATACCTAAACA..................................2440.251100000
....................................................................................................................ACCTAAACAGCAGTAAACGGCTTC...................2440.251100000
................................................................................ATATACTTCAGCGTTACTGCTT.........................................................2240.251000010
......................................................................................................TCGGACAAATGCATACCTAAACAGC................................2540.251100000
...............................................................................................................TGCATACCTAAACAGCAGTAAACGGCG.....................2740.251100000
......................................................................................................................CTAAACAGCAGTAAACGGCT.....................2040.251000010
.....................................................................................................................CCTAAACAGCAGTAAACGGC......................2040.251000010
...........................................................................................................CAAATGCATACCTAAACAGCAGTAAACGG.......................2940.251100000
...................................................................................TACTTCAGCGTTACTGCTTTCGGACC..................................................2640.251000010
....................................................................................................TTTCGGACAAATGCATACCTAAACAG.................................2640.251100000
...................................................................................TACTTCAGCGTTACTGCTTTCGGACTT.................................................2740.251100000
.................................................................................TATACTTCAGCGTTACTGCTTTCGGA....................................................2640.251100000
.....................................................................................................TTCGGACAAATGCATACCTAAACAGCAG..............................2840.251100000
...................................................................................TACTTCAGCGTTACTGCTTTCGGACAG.................................................2740.251100000
................................................................................................................GCATACCTAAACAGCAGTAAACG........................2350.201100000
................................................................................................................GCATACCTAAACAGCAGT.............................1850.201100000
.......................................................................................TCAGCGTTACTGCTTTCGGACAAATGCA............................................2850.201100000
.....................................................................................CTTCAGCGTTACTGCTTTCGGACAAAT...............................................2750.201100000
.......................................................................................TCAGCGTTACTGCTTTCGGAC...................................................2150.201000010
.....................................................................................................................CCTAAACAGCAGTAAACGG.......................1950.201100000
...................................................................................TACTTCAGCGTTACTGCTTTC.......................................................2150.201100000
.......................................................................................TCAGCGTTACTGCTTTCGGACAAA................................................2450.201100000
...................................................................................................................TACCTAAACAGCAGTAAAC.........................1950.201000010
...................................................................................TACTTCAGCGTTACTGCTTTCGGC....................................................2450.201100000
......................................................................................................................CTAAACAGCAGTAAACGG.......................1850.201100000
................................................................................................................GCATACCTAAACAGCAGTA............................1950.201100000
...................................................................................TACTTCAGCGTTACTGCTTTCGGAG...................................................2550.201100000
.....................................................................................CTTCAGCGTTACTGCTTTCGGACAAA................................................2650.201100000
...............................................................................................................TGCATACCTAAACAGCAGC.............................1950.201000010
..................................................................................................................ATACCTAAACAGCAGTAAACGG.......................2250.201100000
........................................................................................CAGCGTTACTGCTTTCGGACA..................................................2150.201000010
........................................................................................CAGCGTTACTGCTTTCGGAC...................................................2050.201000010
......................................................................................TTCAGCGTTACTGCTTTCGGACA..................................................2350.201100000
...................................................................................................CTTTCGGACAAATGCATACC........................................2050.201000010
............................................................................................GTTACTGCTTTCGGACAAA................................................1950.201100000
...................................................................................TACTTCAGCGTTACTGCTTTCGGAA...................................................2550.201100000
droVir3
TCATC------GGGTAAATTTTACAACTGTTGCTTAGACTTCCTTAACCCAACCCGATTCTCTGGTAATGAGGTATTAATAAAAACCACTGCGTTACTGCTTTCGGACAAAGACATACCTAAACAGCAGTAAACGGCTTCCTGGGCGGATATTTCCGTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................CAAAGACATACCTAAACAGCAGTAAAC.........................2799.008100140000000000000000000004071152689218030100000000000000000000000
.................................TTAGACTTCCTTAACCCAACCCGATTC...................................................................................................27118.829700348030000013000000010033061100217002064001000000001000000000000
.................................TTAGACTTCCTTAACCCAACCCGAT.....................................................................................................25134.6260103640000001300000004003402180103103046010000000100000000000000
.................................TTAGACTTCCTTAACCCAACCCGATT....................................................................................................26134.62601082400000005000000000022010120312004054111100000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAAACG........................2894.5641002000000000200000000000124190323016221000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAA...........................2592.5623001000000000000000000001113281011001020000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAAA..........................2691.8917000000000000000000100000003131011005010000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTA............................24101.8018004000000000000000000000000221103003020000000000000000000000000
......................................................................................................TCGGACAAAGACATACCTAAACAGCAGTA............................29101.8018000000000000000000000000000000000000000001150312110010000200000
.................................TTAGACTTCCTTAACCCAACCCGA......................................................................................................24131.7723206300000000100000000002002120102001000000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGT.............................23101.7017002000000000010000001002120002002010001100000000000000000000010
.................................TTAGACTTCCTTAACCCAACCCGATTCT..................................................................................................28111.4516006100000000000000010000002000110002020000000000000000000000000
.................................TTAGACTTCCTTAACCCAACCCGATTCTC.................................................................................................29110.829003000000000000000000000001040001000000000000000000000000000000
..................................TAGACTTCCTTAACCCAACCCGATTC...................................................................................................26110.738003000000000000000000000001200020000000000000000000000000000000
......................................................................................................TCGGACAAAGACATACCTAAACAGCAGTAAACGGC......................3590.444000000000000000000000000000000000000000002000010000100000000000
....................................................................TGAGGTATTAATAAAAACCACTGCGT.................................................................26100.404001000000000100000000000001000000000010000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAAACGGC......................3090.333000000000000000000000000000000000000000000100000001000000100000
..................................TAGACTTCCTTAACCCAACCCGAT.....................................................................................................24130.314001000000000000000000000000200010000000000000000000000000000000
.................................TTAGACTTCCTTAACCCAACCCG.......................................................................................................23130.314002000000000000000000000100000000000000000000010000000000000000
..................................TAGACTTCCTTAACCCAACCCGATT....................................................................................................25130.314002000000000000000000000000100010000000000000000000000000000000
.................................TTAGACTTCCTTAACCCAACCC........................................................................................................22130.314002100000000000000000000000010000000000000000000000000000000000
......................................................................................................TCGGACAAAGACATACCTAAACAGCA...............................26100.303000000000000000000000000000000000000000000000000102000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAG..............................22100.303000000000000000000001000000100010000000000000000000000000000000
............................................................................................................AAAGACATACCTAAACAGCAGTAAAC.........................2690.222002000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ACAAAGACATACCTAAACAGCAGTAAAC.........................2890.222001000000000000000000000000100000000000000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAAAT.........................2790.222000000000000000000000000001000000000000100000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAAAA.........................2790.222000000000000000000000000010100000000000000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCA...............................21100.202000000000000000000000000001000001000000000000000000000000000000
....................................................................TGAGGTATTAATAAAAACCACTGCG..................................................................25100.202000000200000000000000000000000000000000000000000000000000000000
..........................................................................................................ACAAAGACATACCTAAACAGCAGTA............................25100.202001000000000000000000000000000000000010000000000000000000000000
..................................TAGACTTCCTTAACCCAACCCGA......................................................................................................23130.152000000000000000000000000000000010000100000000000000000000000000
..............................TGCTTAGACTTCCTTAACCCAACCCGA......................................................................................................27130.152000000000000000000000000110000000000000000000000000000000000000
.........................................................................................TGCGTTACTGCTTTCGGACAAAGACA............................................26140.142000000000000000000000000000010001000000000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAAACGG.......................2990.111001000000000000000000000000000000000000000000000000000000000000
............................................................................................................AAAGACATACCTAAACAGCAGTAAACGGC......................2990.111000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAAACGC.......................2990.111000000000000000000000000001000000000000000000000000000000000000
............................................................................................................AAAGACATACCTAAACAGCAGTA............................23100.101000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGG.............................23100.101000000000000000000001000000000000000000000000000000000000000000
....................................................................TGAGGTATTAATAAAAACCACTGCGA.................................................................26100.101000000000000000000000000010000000000000000000000000000000000000
....................................................................TGAGGTATTAATAAAAACCACTGCGTTA...............................................................28100.101000000000000000000000000001000000000000000000000000000000000000
....................................................................TGAGGTATTAATAAAAACCACTGCGTTAC..............................................................29100.101000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................CAAAGACATACCTAAACAGCAGTAT...........................25100.101000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................GACATACCTAAACAGCAGTAAACGGCT.....................27100.101000000000000000000000000000000010000000000000000000000000000000
.................................................................................................TGCTTTCGGACAAAGACATACCTAAAC...................................27100.101000000000000000000000000000000000001000000000000000000000000000
......................................................................................................TCGGACAAAGACATACCTAAACAGCAGT.............................28100.101000000000000000000000000000000000000000000000100000000000000000
.................................................................................................TGCTTTCGGACAAAGACATACCTAAACA..................................28100.101000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................CATACCTAAACAGCAGTAAACGGC......................24100.101000000000000000000000000000000000001000000000000000000000000000
.................................TTAGACTTCCTTAACCCAACCCGATTCC..................................................................................................28110.091001000000000000000000000000000000000000000000000000000000000000
...................................AGACTTCCTTAACCCAACCCGATTC...................................................................................................25110.091001000000000000000000000000000000000000000000000000000000000000
...................................................................................AACCACTGCGTTACTGCTTTCGGA....................................................24120.081000000000000000000000000000000001000000000000000000000000000000
....................................................CCCGATTCTCTGGTAATGAGGTAT...................................................................................24120.081000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................AAACAGCAGTAAACGGCTTCC..................21120.081000000000000000000000000000000010000000000000000000000000000000
......................................CTTCCTTAACCCAACCCGATTC...................................................................................................22120.081000000000000000000000000000000000000010000000000000000000000000
.......................CAACTGTTGCTTAGACTTCCTTAACCC.............................................................................................................27120.081000000000000000000000001000000000000000000000000000000000000000
......................................................................................CACTGCGTTACTGCTTTCGGACAAAG...............................................26120.081000000000000000000001000000000000000000000000000000000000000000
....................................GACTTCCTTAACCCAACCCGA......................................................................................................21130.081000000000000000000000000000001000000000000000000000000000000000
...............................GCTTAGACTTCCTTAACCCAACCCGA......................................................................................................26130.081000000000000000000000000000000010000000000000000000000000000000
..................................TAGACTTCCTTAACCCAACCCG.......................................................................................................22130.081001000000000000000000000000000000000000000000000000000000000000
..............................................................................................TACTGCTTTCGGACAAAGACATACC........................................25130.081000000000000000000000000000000001000000000000000000000000000000
......................................................................................CACTGCGTTACTGCTTTCGG.....................................................20130.081000000000000000000000000000010000000000000000000000000000000000
.................................................................................................TGCTTTCGGACAAAGACATACCTA......................................24130.081000000000000000000000000000000000000001000000000000000000000000
...................................................................................AACCACTGCGTTACTGCTTTC.......................................................21130.081000000000000000000000000000100000000000000000000000000000000000
.................................TTAGACTTCCTTAACCCAACCCGC......................................................................................................24130.081000000000000000000000001000000000000000000000000000000000000000
................................................................................................CTGCTTTCGGACAAAGACATACC........................................23130.081000000000000010000000000000000000000000000000000000000000000000
.............................................................................................TTACTGCTTTCGGACAAAGACATACC........................................26130.081000000000000000000001000000000000000000000000000000000000000000
..............................TGCTTAGACTTCCTTAACCCAACCCG.......................................................................................................26130.081000000000000000000000000100000000000000000000000000000000000000
.................................................................................................TGCTTTCGGACAAAGACATACCTAAA....................................26130.081000000000000000000000000000100000000000000000000000000000000000
.................................TTAGACTTCCTTAACCCA............................................................................................................18140.071000000000000000000000000000000100000000000000000000000000000000
..........................................................................................GCGTTACTGCTTTCGGACAAAGAC.............................................24140.071001000000000000000000000000000000000000000000000000000000000000
.................................TTAGACTTCCTTAACCCAAC..........................................................................................................20140.071000000000000000000000000000001000000000000000000000000000000000
...........................................................................................CGTTACTGCTTTCGGACAAAGACATAC.........................................27140.071000000000000000000000000001000000000000000000000000000000000000
..............................................................TGGTAATGAGGTATTAATAAAA...........................................................................22150.071000000000000000000000000001000000000000000000000000000000000000
.......................................................................................ACTGCGTTACTGCTTTCGGACA..................................................22160.061000000000000000000000000100000000000000000000000000000000000000
......................................CTTCCTTAACCCAACCCGAT.....................................................................................................20180.061000000000000000000000000001000000000000000000000000000000000000
droGri2
ATTCG------A---------------------------------------------TTCTCG---GGTGATGTGTTAATTTAAAAATTACCATTCCTGGTTTCGAGCTCTCACAATCCCACACAATAATTTACGGCTTTCTAATCA------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TCCTG------AGGCAAACTTTGCAATTGCTGTCTAGATTTGAGCATTTTAACTCGAAGATCTGGTAAACTAGTATTAATAAACTTATCTTTATGGCTTATATTAGACATTGACATCCCTAAACAGCAATAGGCAGCTTCCTGAGCAGAGATCTCAGTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................TGCAATTGCTGTCTAGATTTGAGCAT................................................................................................................26145.14722141550
.....................TGCAATTGCTGTCTAGATTTGAGCA.................................................................................................................25145.07710440270
.....................TGCAATTGCTGTCTAGATTTGAGCATT...............................................................................................................27144.64650371270
...........................TGCTGTCTAGATTTGAGCATTTTAACT.........................................................................................................27124.58550150400
...............................................TTTAACTCGAAGATCTGGTAAACTAG......................................................................................2654.2021018030
.................................................TAACTCGAAGATCTGGTAAACTAGTAT...................................................................................2784.13330110220
......................................TTTGAGCATTTTAACTCGAAGATCTGG..............................................................................................2753.8019017020
........................................TGAGCATTTTAACTCGAAGATCTGG..............................................................................................2553.6018012060
.......................................................................................................................TAAACAGCAATAGGCAGCTTCCTGAG..............26142.4334070270
.....................TGCAATTGCTGTCTAGATTTGAGCATTT..............................................................................................................28122.4229024050
...........................TGCTGTCTAGATTTGAGCATTTTAAC..........................................................................................................26122.1726018080
..............................................TTTTAACTCGAAGATCTGGTAAACT........................................................................................2561.831108030
................................................TTAACTCGAAGATCTGGTAAACTAG......................................................................................2551.80909000
.......................................................................................................................TAAACAGCAATAGGCAGCTTCCTGA...............25141.79250150100
..............................TGTCTAGATTTGAGCATTTTAACT.........................................................................................................24121.5018050130
..............................TGTCTAGATTTGAGCATTTTAACTCGAA.....................................................................................................28121.5018030150
....................TTGCAATTGCTGTCTAGATTTGAGCA.................................................................................................................26141.211709080
...................................................................................................................TCCCTAAACAGCAATAGGCAGCTTCC..................26141.2117015020
.....................TGCAATTGCTGTCTAGATTTGAGC..................................................................................................................24141.141609070
.................................................TAACTCGAAGATCTGGTAAACTAGT.....................................................................................2581.13902061
.................................................................................................................................TAGGCAGCTTCCTGAGCAGAGATCT.....25141.0014012020
................................................TTAACTCGAAGATCTGGTAAACTAGTAT...................................................................................2851.00502030
.......................................TTGAGCATTTTAACTCGAAGATCTGG..............................................................................................2651.00504010
.................................................TAACTCGAAGATCTGGTAAACTAGTA....................................................................................2681.00806020
.......................................................................................................................TAAACAGCAATAGGCAGCTTCCTG................24140.931307060
..............................TGTCTAGATTTGAGCATTTTAACTCGA......................................................................................................27120.921106050
....................TTGCAATTGCTGTCTAGATTTGAGC..................................................................................................................25140.861203090
.......................................................................................................................TAAACAGCAATAGGCAGCTTCCTGAGCA............28130.8511010010
..............................................TTTTAACTCGAAGATCTGGTAAACTAG......................................................................................2750.80403010
...................TTTGCAATTGCTGTCTAGATTTGAGC..................................................................................................................26140.791102090
TCCTG------AGGCAAACTTTGCAATTGCTGTC.............................................................................................................................28120.67806020
...............................................TTTAACTCGAAGATCTGGTAAACT........................................................................................2460.67403010
TCCTG------AGGCAAACTTTGCAATTGCTG...............................................................................................................................26120.67807010
.................................................................................................................................TAGGCAGCTTCCTGAGCAGAGATCTCAG..2890.67605010
..............................................TTTTAACTCGAAGATCTGGTAAAC.........................................................................................2460.67403010
...................TTTGCAATTGCTGTCTAGATTTGAGCA.................................................................................................................27140.64905040
...............AAACTTTGCAATTGCTGTCTAGATT.......................................................................................................................25140.64902070
.................................................TAACTCGAAGATCTGGTAAACTAG......................................................................................2480.63505000
..................................................AACTCGAAGATCTGGTAAACTAGTAT...................................................................................2680.63502030
................................................TTAACTCGAAGATCTGGTAAACTAGTA....................................................................................2750.60302010
...............................................TTTAACTCGAAGATCTGGTAAACTAGTAT...................................................................................2950.60303000
................................TCTAGATTTGAGCATTTTAACT.........................................................................................................22120.58700070
............................................................................................................................AGCAATAGGCAGCTTCCTGAGCAGAG.........26140.57805030
.................................................................................................................................TAGGCAGCTTCCTGAGCAGAGATC......24140.57808000
......................GCAATTGCTGTCTAGATTTGAGCA.................................................................................................................24140.57808000
.......................................................................................................................TAAACAGCAATAGGCAGCTTCCTGAGC.............27130.54702050
......................................................CGAAGATCTGGTAAACTAGTATTAATAA.............................................................................2820.50100010
.......................................................................................................TAGACATTGACATCCCTAAACAGCAA..............................2620.50101000
.................................................................................................................................TAGGCAGCTTCCTGAGCAGAGATCTCA...27100.50501040
......................................................CGAAGATCTGGTAAACTAGTATTAA................................................................................2520.50100010
........................................................................................................................AAACAGCAATAGGCAGCTTCCTGAGCA............27130.46605010
.................................................................................................................................TAGGCAGCTTCCTGAGCAGAGATCTC....26100.40404000
........................................TGAGCATTTTAACTCGAAGATCTGGTA............................................................................................2750.40200020
...............................................TTTAACTCGAAGATCTGGTAAACTAGT.....................................................................................2750.40202000
.........................................GAGCATTTTAACTCGAAGATCTGG..............................................................................................2450.40202000
........................................TGAGCATTTTAACTCGAAGATCTGGT.............................................................................................2650.40201010
.................................................................................................................CATCCCTAAACAGCAATAGGCAGCT.....................25140.36505000
....................TTGCAATTGCTGTCTAGATTTGAGCAT................................................................................................................27140.36502030
........................................................................................................................AAACAGCAATAGGCAGCTTCCTGA...............24140.36504010
............................................................................................................................AGCAATAGGCAGCTTCCTGAGCAGAGA........27140.36503020
....................TTGCAATTGCTGTCTAGATTTGAG...................................................................................................................24140.36500050
...................TTTGCAATTGCTGTCTAGATTTGAG...................................................................................................................25140.36502030
................AACTTTGCAATTGCTGTCTAGATT.......................................................................................................................24140.36505000
..............................TGTCTAGATTTGAGCATTTTAACTCG.......................................................................................................26120.33402020
..............................TGTCTAGATTTGAGCATTTTAACTCGAAG....................................................................................................29120.33403100
TCCTG------AGGCAAACTTTGCAATTGCT................................................................................................................................25120.33401030
...............................GTCTAGATTTGAGCATTTTAACTCGA......................................................................................................26120.33403010
........................................................................................................................AAACAGCAATAGGCAGCTTCCTGAGC.............26130.31404000
...................................................................................................................TCCCTAAACAGCAATAGGCAGCTTCCT.................27130.31402020
..................................TAGATTTGAGCATTTTAACTCGAAGATC.................................................................................................28100.30301020
.........................................................................................................................AACAGCAATAGGCAGCTTCCTGAGCAG...........27140.29400040
..........................................AGCATTTTAACTCGAAGATCTGG..............................................................................................2370.29202000
.............................................ATTTTAACTCGAAGATCTGGTA............................................................................................2270.29200020
..................................TAGATTTGAGCATTTTAACT.........................................................................................................20120.25301020
...................................................ACTCGAAGATCTGGTAAACTAGTAT...................................................................................2580.25200020
...................................................................................................................TCCCTAAACAGCAATAGGCAGCTTCCTG................28130.23303000
........................................................................................................................AAACAGCAATAGGCAGCTTCCTGAGCAG...........28130.23300030
.................................................................................................................................TAGGCAGCTTCCTGAGCAGAGATCTCAGA.2990.22200020
..............CAAACTTTGCAATTGCTGTCTAGATT.......................................................................................................................26140.21300030
...........................................................................................................................CAGCAATAGGCAGCTTCCTGAGCA............24140.21301200
..........................................................................................................................ACAGCAATAGGCAGCTTCCTGAGCAG...........26140.21301020
.....................TGCAATTGCTGTCTAGATTTGAG...................................................................................................................23140.21301020
....................TTGCAATTGCTGTCTAGATTTGAGCATT...............................................................................................................28140.21303000
...................................AGATTTGAGCATTTTAACTCGAAGATC.................................................................................................27100.20201010
...............................................TTTAACTCGAAGATCTGGTAAACTAGTA....................................................................................2850.20101000
..............................................TTTTAACTCGAAGATCTGGTAAACTA.......................................................................................2650.20101000
................................................TTAACTCGAAGATCTGGTAAACTAGT.....................................................................................2650.20100010
.......................................TTGAGCATTTTAACTCGAAGATCTGGTA............................................................................................2850.20101000
TCCTG------AGGCAAACTTTGCAATTGC.................................................................................................................................24120.17202000
............................................CATTTTAACTCGAAGATCTGGTAAACT........................................................................................2760.17101000
................................TCTAGATTTGAGCATTTTAACTCGAA.....................................................................................................26120.17200020
..................................TAGATTTGAGCATTTTAACTC........................................................................................................21120.17202000
..............................TGTCTAGATTTGAGCATTTTAAC..........................................................................................................23120.17202000
.................ACTTTGCAATTGCTGTCTAGATTTGA....................................................................................................................26130.15200020
..................CTTTGCAATTGCTGTCTAGATTTGAGC..................................................................................................................27130.15201010
..............................................................................................................TGACATCCCTAAACAGCAATAGGCAGCT.....................28130.15202000
...................TTTGCAATTGCTGTCTAGATTTGAGCATT...............................................................................................................29140.14202000
.............................................ATTTTAACTCGAAGATCTGG..............................................................................................2070.14101000
.............................................ATTTTAACTCGAAGATCTGGT.............................................................................................2170.14101000
...........................................GCATTTTAACTCGAAGATCTGG..............................................................................................2270.14101000
...............................................................................................................................AATAGGCAGCTTCCTGAGCAGAGATC......26140.14200020
..............................................................................................................TGACATCCCTAAACAGCAATAGGCA........................25140.14202000
.......................................................................................................................TAAACAGCAATAGGCAGCTTCCT.................23140.14202000
............................................................................................................................AGCAATAGGCAGCTTCCTGAGCAGA..........25140.14201010
................................................................................................................ACATCCCTAAACAGCAATAGGCAGCT.....................26140.14202000
............................................................................................................................AGCAATAGGCAGCTTCCTGAGCAGAGT........27140.14200020
..........................TTGCTGTCTAGATTTGAGC..................................................................................................................19150.13200020
..................................................AACTCGAAGATCTGGTAAACTAG......................................................................................2380.13101000
.................................................TAACTCGAAGATCTGGTAAACTAGTATT..................................................................................2880.13101000
.................................................TAACTCGAAGATCTGGTAAACTA.......................................................................................2380.13101000
..................................................AACTCGAAGATCTGGTAAACTAGTA....................................................................................2580.13101000
....................................................CTCGAAGATCTGGTAAACTAG......................................................................................2190.11101000
......................................................CGAAGATCTGGTAAACTAGTAT...................................................................................2290.11100010
....................................................CTCGAAGATCTGGTAAACTAGTATT..................................................................................2590.11110000
....................................................................................................................................GCAGCTTCCTGAGCAGAGATCTCAG..2590.11101000
.....................................................TCGAAGATCTGGTAAACTAGTAT...................................................................................2390.11100010
......................................................CGAAGATCTGGTAAACTAGT.....................................................................................2090.11101000
......................................TTTGAGCATTTTAACTCGAAGA...................................................................................................22100.10100010
......................................TTTGAGCATTTTAACTCGAAGATCTG...............................................................................................26100.10100010
.....................................ATTTGAGCATTTTAACTCGAAGATC.................................................................................................25100.10100010
..................................................................................................................................AGGCAGCTTCCTGAGCAGAGATCTCA...26100.10100010
..................................TAGATTTGAGCATTTTAACTCGAAGA...................................................................................................26100.10101000
..........................TTGCTGTCTAGATTTGAGCATTTTAACT.........................................................................................................28110.09100010
......................GCAATTGCTGTCTAGATTTGAGCATTT..............................................................................................................27120.08101000
TCCTG------AGGCAAACTTTGCAATTGCTGT..............................................................................................................................27120.08100010
......................................TTTGAGCATTTTAACTCGA......................................................................................................19120.08101000
...................................AGATTTGAGCATTTTAACA.........................................................................................................19120.08100010
.............................CTGTCTAGATTTGAGCATTTTAAC..........................................................................................................24120.08101000
TCCTG------AGGCAAACTTTGCAATTG..................................................................................................................................23120.08101000
............................GCTGTCTAGATTTGAGCATTTTAACT.........................................................................................................26120.08101000
................................TCTAGATTTGAGCATTTTAACTCGAAG....................................................................................................27120.08101000
............................GCTGTCTAGATTTGAGCATTTTAAC..........................................................................................................25120.08101000
..............................TGTCTAGATTTGAGCATTTTAACTC........................................................................................................25120.08101000
.......................................................................................................................TAAACAGCAATAGGCAGCTTCCTGAGCT............28130.08100010
...............................................................................................................GACATCCCTAAACAGCAATAGGCAGC......................26130.08101000
.................ACTTTGCAATTGCTGTCTAGATTTGAG...................................................................................................................27130.08101000
.............GCAAACTTTGCAATTGCTGTCTAGATTTG.....................................................................................................................29130.08101000
.................ACTTTGCAATTGCTGTCTAGATTTGAGCA.................................................................................................................29130.08101000
...........................TGCTGTCTAGATTTGAGCATTT..............................................................................................................22130.08101000
..............................................................................................................TGACATCCCTAAACAGCAATAGGCAG.......................26130.08101000
..................................................................................................................ATCCCTAAACAGCAATAGGCAGCTTCCT.................28130.08100010
................AACTTTGCAATTGCTGTCTAGATTT......................................................................................................................25130.08101000
.................ACTTTGCAATTGCTGTCTAGATTTGAGC..................................................................................................................28130.08101000
.CCTG------AGGCAAACTTTGCAATTGCTG...............................................................................................................................25130.08101000
....................TTGCAATTGCTGTCTAGATTTGA....................................................................................................................23140.07100010
.....................TGCAATTGCTGTCTAGATTTGAGCATTG..............................................................................................................28140.07110000
......................GCAATTGCTGTCTAGATTTGAGC..................................................................................................................23140.07101000
...........................................................................................................................CAGCAATAGGCAGCTTCCTGAGCAGAA.........27140.07101000
......................................................................................................................CTAAACAGCAATAGGCAGCTTCCTGAG..............27140.07100010
............................................................................................................................AGCAATAGGCAGCTTCCTGAGCA............23140.07101000
...................TTTGCAATTGCTGTCTAGATTTGAGCAT................................................................................................................28140.07100010
.........................................................................................................................AACAGCAATAGGCAGCTTCCTGAGCA............26140.07101000
...........................................................................................................................CAGCAATAGGCAGCTTCCTGAGCAGAGA........28140.07101000
............................................................................................................................AGCAATAGGCAGCTTCCTGAGCAG...........24140.07100010
....................................................................................................................CCCTAAACAGCAATAGGCAGCTTCC..................25140.07101000
........................................................................................................................AAACAGCAATAGGCAGCTTCCTGAG..............25140.07101000
................................................................................................................................ATAGGCAGCTTCCTGAGCAGAGATC......25140.07100010
......................GCAATTGCTGTCTAGATTTGAGCATT...............................................................................................................26140.07101000
...................................................................................................................TCCCTAAACAGCAATAGGCAGCT.....................23140.07101000
.........................................................................................................................AACAGCAATAGGCAGCTTCCTGAGC.............25140.07101000
.................................................................................................................................TAGGCAGCTTCCTGAGCAGAGAT.......23140.07100010
....................TTGCAATTGCTGTCTAGATTTGAGCAA................................................................................................................27140.07100010
.................ACTTTGCAATTGCTGTCTAGATT.......................................................................................................................23140.07101000
.......................................................................................................................TAAACAGCAATAGGCAGCTTCCTGTT..............26140.07100010
.................................................................................................................................TAGGCAGCTTCCTGAGCAGAG.........21140.07101000
......................................................................................................................CTAAACAGCAATAGGCAGCTTCCTG................25140.07100010
...............................................................................................................................AATAGGCAGCTTCCTGAGCAG...........21140.07100010
...........................................................................................................................CAGCAATAGGCAGCTTCCTGAGCAGA..........26140.07100010
.......................CAATTGCTGTCTAGATTTGAGC..................................................................................................................22140.07101000
............................................................................................................................AGCAATAGGCAGCTTCCTGAGCAGAGAA.......28140.07100010
......................GCAATTGCTGTCTAGATTTGAGCAT................................................................................................................25140.07101000
.......................................................................................................................TAAACAGCAATAGGCAGCTTC...................21150.07100010
......................................................................................................................CTAAACAGCAATAGGCAGCT.....................20150.07101000
........................................................................................................................AAACAGCAATAGGCAGCTTCCTGAGACC...........28150.07100010
..........................TTGCTGTCTAGATTTGAGCA.................................................................................................................20150.07101000
......................................................................................................................CTAAACAGCAATAGGCAGC......................19150.07101000
................AACTTTGCAATTGCTGTCTAGATG.......................................................................................................................24150.07101000
........................................................................................................................AAACAGCAATAGGCAGCTTC...................20150.07100010
...........................TGCTGTCTAGATTTGAGC..................................................................................................................18160.06100010
...........................TGCTGTCTAGATTTGAGCA.................................................................................................................19160.06101000
dp5
TCATT------ATGCATATTTTGTAGGATGCTTGTGGATTTGAGCATTCGAACTCGTTGCTCTGGAGGGAAAGTATTTACTTGAACACATTTGTTGCTAGTTCCGGACAATGGAATGCCTAGACAACAATATACGGCTTCCTGAGCAGATATCTCAGTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................TACTTGAACACATTTGTTGCTAGT..........................................................24933.0029701863030153510
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAGC.............27932.332910228511502040
............................TGCTTGTGGATTTGAGCATTCGAAC..........................................................................................................251013.90139096102030370
...................TTTGTAGGATGCTTGTGGATTTGAGC..................................................................................................................26118.649508000012840
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAG..............2698.337506920101020
.......................................................................................................................TAGACAACAATATACGGCTTCCTGA...............2597.3366050200013100
.............................................................................TACTTGAACACATTTGTTGCTAG...........................................................2396.335704510410060
.....................TGTAGGATGCTTGTGGATTTGAGC..................................................................................................................24115.826408100022501
.......................................................................................................................TAGACAACAATATACGGCTTCC..................2294.3339024100101210
...................TTTGTAGGATGCTTGTGGATTTGAG...................................................................................................................25112.823121001145170
.................................................................................................................................TATACGGCTTCCTGAGCAGATATC......2482.752201910001010
................TATTTTGTAGGATGCTTGTGGATT.......................................................................................................................24112.642901010004590
............TGCATATTTTGTAGGATGCTTGTGGA.........................................................................................................................26102.6026030000011120
.............................................................................TACTTGAACACATTTGTTGCTAGTTC........................................................2692.562301920000110
....................TTGTAGGATGCTTGTGGATTTGAGC..................................................................................................................25112.552805000023180
................................TGTGGATTTGAGCATTCGAACTCGT......................................................................................................2592.222001200002150
............TGCATATTTTGTAGGATGCTTGTGG..........................................................................................................................25102.202201000003630
...........................................................................................................CAATGGAATGCCTAGACAACAATA............................2412.0020000000200
.......................................................................................................................TAGACAACAATATACGGCTTCCTG................2492.001801800000000
.....................TGTAGGATGCTTGTGGATTTGAG...................................................................................................................23111.912104000030140
........................................................................................................................AGACAACAATATACGGCTTCCTGAGC.............2691.891701610000000
..............................................................................ACTTGAACACATTTGTTGCTAGT..........................................................2391.781601600000000
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAGCA............2881.751401400000000
...................TTTGTAGGATGCTTGTGGATTTGA....................................................................................................................24111.73190600002380
.......................TAGGATGCTTGTGGATTTGAGCAT................................................................................................................24101.701701100005010
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAGCAG...........2981.63130700004020
.............................................................................TACTTGAACACATTTGTTGCTA............................................................2291.561401200000110
.....................TGTAGGATGCTTGTGGATTTGAGCA.................................................................................................................25111.451603000000130
.......................................................................................................................TAGACAACAATATACGGCTTCCT.................2391.441301110000010
...................................................................................................................................TACGGCTTCCTGAGCAGATATCTCA...2591.441301030000000
.............................................................................TACTTGAACACATTTGTTGCTAGTTCC.......................................................2791.441301100000200
.............................................................................TACTTGAACACATTTGTTGCT.............................................................21101.301301210000000
...............................................TCGAACTCGTTGCTCTGGAGG...........................................................................................2181.25100700000210
...................................................................................................................................TACGGCTTCCTGAGCAGATATCTC....2491.22110920000000
...................................................................................................................................TACGGCTTCCTGAGCAGATATCTCAG..2691.221101100000000
...................TTTGTAGGATGCTTGTGGATTTGAGCAT................................................................................................................28101.20120200009010
............................TGCTTGTGGATTTGAGCATTCGAACT.........................................................................................................26101.101101100000000
.....................................................................................................................CCTAGACAACAATATACGGCTTCC..................2481.0080800000000
...................................................................................................................................TACGGCTTCCTGAGCAGATATCT.....2391.0090800100000
.............................GCTTGTGGATTTGAGCATTCGAAC..........................................................................................................24101.001001000000000
.....................................................TCGTTGCTCTGGAGGGAAAGT.....................................................................................2181.0080600002000
............................TGCTTGTGGATTTGAGCATTCGAA...........................................................................................................24111.001101100000000
.....................................................................................................TCCGGACAATGGAATGCCTAGACAACAA..............................2811.0010100000000
...................................................................................................................TGCCTAGACAACAATATACGGCTTCC..................2631.0030100000200
....................TTGTAGGATGCTTGTGGATTTGAG...................................................................................................................24110.91100200101240
.............................................................................TACTTGAACACATTTGTTGCTAGTT.........................................................2590.8980400000310
.....................................................TCGTTGCTCTGGAGGGAAAGTATT..................................................................................2480.8870400000120
...............................................TCGAACTCGTTGCTCTGGAGGG..........................................................................................2280.8870300000220
............................TGCTTGTGGATTTGAGCATTCGA............................................................................................................23110.8290900000000
.....................TGTAGGATGCTTGTGGATTTGAGCAT................................................................................................................26100.8080200001050
..............CATATTTTGTAGGATGCTTGTGGA.........................................................................................................................24100.8080200000330
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAGA.............2790.7870700000000
.....................................................TCGTTGCTCTGGAGGGAAAGTA....................................................................................2280.7560400001010
.....................................................TCGTTGCTCTGGAGGGAAAG......................................................................................2080.7560600000000
...................................................................................................................................TACGGCTTCCTGAGCAGATATC......2290.6760600000000
...............................................TCGAACTCGTTGCTCTGGAGGGAAA.......................................................................................2580.6350500000000
..............................................TTCGAACTCGTTGCTCTGGAGG...........................................................................................2280.6350200000300
.................................................................................................................................TATACGGCTTCCTGAGCAGATATCTC....2680.6350410000000
........................................TGAGCATTCGAACTCGTTGCTCTGGAG............................................................................................2780.6350300000020
............................TGCTTGTGGATTTGAGCATTCGAACA.........................................................................................................26100.6060400000020
............TGCATATTTTGTAGGATGCTTGTG...........................................................................................................................24100.6060100000230
.......................TAGGATGCTTGTGGATTTGAGCATT...............................................................................................................25100.6060300101010
.............................................................................TACTTGAACACATTTGTTGCTAGTA.........................................................2590.5650300000200
...................TTTGTAGGATGCTTGTGGATTT......................................................................................................................22110.5560200000040
.......................TAGGATGCTTGTGGATTTGAGCA.................................................................................................................23110.5560100000050
................TATTTTGTAGGATGCTTGTGGA.........................................................................................................................22110.5560000000330
............................TGCTTGTGGATTTGAGCATTCGAAA..........................................................................................................25110.5560600000000
..................TTTTGTAGGATGCTTGTGGATTTGA....................................................................................................................25110.5560000000060
................................TGTGGATTTGAGCATTCG.............................................................................................................18110.5560000000150
............TGCATATTTTGTAGGATGCTTGTGGAT........................................................................................................................27100.5050000200030
..............................................TTCGAACTCGTTGCTCTGGAGGG..........................................................................................2380.5040100000030
..............................................TTCGAACTCGTTGCTCTGGAGGGAAAG......................................................................................2780.5040310000000
..............CATATTTTGTAGGATGCTTGTGGATT.......................................................................................................................26100.5050200000030
.......................TAGGATGCTTGTGGATTTGAGC..................................................................................................................22110.4550100000040
..............................................................................ACTTGAACACATTTGTTGCTAG...........................................................2290.4440400000000
............................................................................TTACTTGAACACATTTGTTGCTAGT..........................................................2590.4440300000100
......................................................................................................................CTAGACAACAATATACGGCTTCC..................2390.4440310000000
........................................................................................................................AGACAACAATATACGGCTTCC..................2190.4440400000000
........................................................................................................................AGACAACAATATACGGCTTCCTGAG..............2590.4440400000000
..................................TGGATTTGAGCATTCGAACTCGTTG....................................................................................................2590.4440100000030
..............CATATTTTGTAGGATGCTTGTGG..........................................................................................................................23100.4040000000040
....................TTGTAGGATGCTTGTGGATTTGAGCAT................................................................................................................27100.4040200002000
............TGCATATTTTGTAGGATGCTTGTGGATT.......................................................................................................................28100.4040400000000
...............................................TCGAACTCGTTGCTCTGGAGGGAA........................................................................................2480.3830300000000
..............................................TTCGAACTCGTTGCTCTGGAGGGAAA.......................................................................................2680.3830100000200
.................................................................................................................................TATACGGCTTCCTGAGCAGATATCT.....2580.3830300000000
..................................................................................................................................ATACGGCTTCCTGAGCAGATATC......2380.3830300000000
............................................CATTCGAACTCGTTGCTCTGGAGG...........................................................................................2480.3830200000100
.................................................................................................................................TATACGGCTTCCTGAGCAGATAT.......2380.3830300000000
.....................................................TCGTTGCTCTGGAGGGAAAGTT....................................................................................2280.3830200001000
.....................TGTAGGATGCTTGTGGATTTGA....................................................................................................................22110.3640000000040
.......................TAGGATGCTTGTGGATTTGAG...................................................................................................................21110.3640100011010
..................TTTTGTAGGATGCTTGTGGATTTTC....................................................................................................................25110.3640000000040
..................TTTTGTAGGATGCTTGTGGATT.......................................................................................................................22110.3640000000130
.....................TGTAGGATGCTTGTGGATT.......................................................................................................................19110.3640200000200
............................................................................TTACTTGAACACATTTGTTGCTAG...........................................................2490.3330300000000
.................................GTGGATTTGAGCATTCGAACTCGT......................................................................................................2490.3330100001010
.............................................................................TACTTGAACACATTTGTTGCTAGA..........................................................2490.3330300000000
.............................................................................TACTTGAACACATTTGTTGCTAGTTCCGG.....................................................2990.3330300000000
..............................................................................ACTTGAACACATTTGTTGCTAGTTC........................................................2590.3330300000000
....................................................................................................................................ACGGCTTCCTGAGCAGATATCTCAG..2590.3330300000000
.........................................................................TATTTACTTGAACACATTTGTTGC..............................................................24100.3030100000200
.......................................................................................................................TAGACAACAATATACGGCTT....................20100.3030200000001
.............................................................................TACTTGAACACATTTGTTG...............................................................19100.3030300000000
.............GCATATTTTGTAGGATGCTTGTGGA.........................................................................................................................25100.3030000000030
............................TGCTTGTGGATTTGAGCATTCGAACAA........................................................................................................27100.3030300000000
..............................................................TGGAGGGAAAGTATTTACTTGAACA........................................................................25100.3030000001200
................TATTTTGTAGGATGCTTGTGGAT........................................................................................................................23110.2730000001110
...................TTTGTAGGATGCTTGTGGAT........................................................................................................................20110.2730200000010
.....................TGTAGGATGCTTGTGGATTTG.....................................................................................................................21110.2730000000030
................TATTTTGTAGGATGCTTGTGG..........................................................................................................................21110.2730000000120
.................................................GAACTCGTTGCTCTGGAGGGA.........................................................................................2180.2520200000000
.....................................................TCGTTGCTCTGGAGGGAAAGTATTT.................................................................................2580.2520200000000
......................................................CGTTGCTCTGGAGGGAAAGTAT...................................................................................2280.2520200000000
...........................................GCATTCGAACTCGTTGCTCTGGAGGG..........................................................................................2680.2520200000000
.............................................ATTCGAACTCGTTGCTCTGGAGGG..........................................................................................2480.2520100000100
.................................................GAACTCGTTGCTCTGGAGGGAAAGT.....................................................................................2580.2520200000000
...................................................................................................................TGCCTAGACAACAATATACGGCTTC...................2540.2510010000000
..................................................................................................................................ATACGGCTTCCTGAGCAGATAT.......2280.2520200000000
..............................................TTCGAACTCGTTGCTCTGGAGGCG.........................................................................................2480.2520000000200
..............................................TTCGAACTCGTTGCTCTGGAGGGAA........................................................................................2580.2520100000010
...............................................TCGAACTCGTTGCTCTGGAGGGAAAG......................................................................................2680.2520200000000
.................................................................................................................................TATACGGCTTCCTGAGCAGA..........2080.2520200000000
...............................................TCGAACTCGTTGCTCTGGAG............................................................................................2080.2520100000010
...........................................GCATTCGAACTCGTTGCTCTGGAGG...........................................................................................2580.2520000000020
...........................................GCATTCGAACTCGTTGCTCTGGAG............................................................................................2480.2520000000110
...........................................................................TTTACTTGAACACATTTGTTGCTAGT..........................................................2690.2220000000200
...................................................................................................................................TACGGCTTCCTGAGCAGATAT.......2190.2220200000000
.........................................................TGCTCTGGAGGGAAAGTATTTACT..............................................................................2490.2220100001000
.........................................................................................................................GACAACAATATACGGCTTCCTG................2290.2220200000000
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAAA.............2790.2220200000000
.............................................................................TACTTGAACACATTTGTTGCTAGTC.........................................................2590.2220010000010
.........................................................TGCTCTGGAGGGAAAGTATT..................................................................................2090.2220200000000
........................................................................................................................AGACAACAATATACGGCTTCCTGA...............2490.2220200000000
........................................................................................................................AGACAACAATATACGGCTTCCTG................2390.2220200000000
..................................TGGATTTGAGCATTCGAACTCGT......................................................................................................2390.2220200000000
................................TGTGGATTTGAGCATTCGAACTCG.......................................................................................................2490.2220200000000
...........................................................................TTTACTTGAACACATTTGTTGCTAG...........................................................2590.2220100000100
..............................................................................ACTTGAACACATTTGTTGCTAGTTCC.......................................................2690.2220200000000
.............GCATATTTTGTAGGATGCTTGTGGAT........................................................................................................................26100.2020110000000
............TGCATATTTTGTAGGATGCTTGTGGAA........................................................................................................................27100.2020200000000
.......................................................................................................................TAGACAACAATATACGGCT.....................19100.2020110000000
..............................................................................ACTTGAACACATTTGTTGCT.............................................................20100.2020200000000
.............................................................................TACTTGAACACATTTGTTGC..............................................................20100.2020100000010
.......................TAGGATGCTTGTGGATTTGAGCATTC..............................................................................................................26100.2020100000010
......................GTAGGATGCTTGTGGATTTGAGCA.................................................................................................................24110.1820200000000
....................TTGTAGGATGCTTGTGGATTTGAGCA.................................................................................................................26110.1820100000010
....................TTGTAGGATGCTTGTGGATTTG.....................................................................................................................22110.1820100000010
...................TTTGTAGGATGCTTGTGGATTTG.....................................................................................................................23110.1820000000020
....................TTGTAGGATGCTTGTGGATTTGA....................................................................................................................23110.1820200000000
......................GTAGGATGCTTGTGGATTTG.....................................................................................................................20110.1820200000000
...................TTTGTAGGATGCTTGTGGATTTGAGCA.................................................................................................................27110.1820100000010
...............................TTGTGGATTTGAGCATTCGAA...........................................................................................................21110.1820000000020
.........................GGATGCTTGTGGATTTGAG...................................................................................................................19120.1720000000020
..........................................................................................................................ACAACAATATACGGCTTCCTGAGCAGA..........2770.1410000001000
......................................................................................................................CTAGACAACAATATACGGCTTCCTGAGCA............2980.1310100000000
..............................................................................................................................CAATATACGGCTTCCTGAGCAGATA........2580.1310100000000
.................................................................................................................................TATACGGCTTCCTGAGCAGAT.........2180.1310100000000
.....................................................TCGTTGCTCTGGAGGGAAAGTATC..................................................................................2480.1310000001000
.............................................................................................................................ACAATATACGGCTTCCTGAGCAGA..........2480.1310100000000
.....................................................TCGTTGCTCTGGAGGGAAAGA.....................................................................................2180.1310100000000
................................................CGAACTCGTTGCTCTGGAGGGAAA.......................................................................................2480.1310100000000
..........................................AGCATTCGAACTCGTTGCTCTG...............................................................................................2280.1310100000000
........................................................................................................................AGACAACAATATACGGCTTCCTGAGCAG...........2880.1310100000000
........................................TGAGCATTCGAACTCGTTGCTCTGG..............................................................................................2580.1310100000000
.....................................................TCGTTGCTCTGGAGGGAAAGTATTTACT..............................................................................2880.1310100000000
...............................................TCGAACTCGTTGCTCTGGAGGGAAAGTT....................................................................................2880.1310100000000
.................................................GAACTCGTTGCTCTGGAGGGAAAG......................................................................................2480.1310000000010
....................................................CTCGTTGCTCTGGAGGGAAAGTA....................................................................................2380.1310100000000
..............................................TTCGAACTCGTTGCTCTGGAG............................................................................................2180.1310100000000
.....................................................................................................................CCTAGACAACAATATACGGCTTCCTG................2680.1310100000000
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAGCAA...........2980.1310100000000
.........................................GAGCATTCGAACTCGTTGCTCTGGA.............................................................................................2580.1310100000000
..............................................TTCGAACTCGTTGCTCTGG..............................................................................................1980.1310100000000
.....................................................TCGTTGCTCTGGAGGGAAAGTC....................................................................................2280.1310000001000
.................................................................................................................................TATACGGCTTCCTGAGCAGATA........2280.1310100000000
............................................CATTCGAACTCGTTGCTCTGGAGGGAA........................................................................................2780.1310100000000
..............................................TTCGAACTCGTTGCTCTGGAGGGA.........................................................................................2480.1310000001000
..................................................................................................................................ATACGGCTTCCTGAGCAGAT.........2080.1310100000000
.............................................................................................................................ACAATATACGGCTTCCTGAGCAGATATC......2880.1310100000000
...............................................TCGAACTCGTTGCTCTGGAGGGT.........................................................................................2380.1310000100000
........................................TGAGCATTCGAACTCGTTGCTCTG...............................................................................................2480.1310100000000
.....................................................TCGTTGCTCTGGAGGGAAA.......................................................................................1980.1310100000000
.....................................................TCGTTGCTCTGGAGGGAAAGTATTC.................................................................................2580.1310000001000
...............................................TCGAACTCGTTGCTCTGGAGGGA.........................................................................................2380.1310000000010
................................................CGAACTCGTTGCTCTGGAGGGAAAT......................................................................................2580.1310000000010
.....................................................TCGTTGCTCTGGAGGGAAAGTAT...................................................................................2380.1310100000000
......................................................CGTTGCTCTGGAGGGAAAGT.....................................................................................2080.1310100000000
..................................................AACTCGTTGCTCTGGAGGGAAAG......................................................................................2380.1310010000000
.................................................................................................................................TATACGGCTTCCTGAGCAGATAAA......2480.1310100000000
.................................................GAACTCGTTGCTCTGGAGG...........................................................................................1980.1310100000000
...............................................TCGAACTCGTTGCTCTGGAGGGAAAGTA....................................................................................2880.1310000000010
.........................................GAGCATTCGAACTCGTTGCTCTG...............................................................................................2380.1310100000000
....................................................CTCGTTGCTCTGGAGGGAAAA......................................................................................2180.1310100000000
............................................CATTCGAACTCGTTGCTCTGGAGA...........................................................................................2480.1310100000000
...............................................TCGAACTCGTTGCTCTGGAGGGAAAGT.....................................................................................2780.1310100000000
........................................TGAGCATTCGAACTCGTTGCTCTGGAGG...........................................................................................2880.1310100000000
.......................................TTGAGCATTCGAACTCGTTGCTCTGGAG............................................................................................2880.1310100000000
..................................................................................................................................ATACGGCTTCCTGAGCAGATATCTC....2580.1310100000000
.....................................................TCGTTGCTCTGGAGGGAAAA......................................................................................2080.1310100000000
.....................................................TCGTTGCTCTGGAGGGAAAGTAAA..................................................................................2480.1310100000000
......................................................................................................................CTAGACAACAATATACGGCTTCCTG................2590.1110100000000
.........................................................................................................................GACAACAATATACGGCTTCCTGAGC.............2590.1110010000000
.....................................................................................................................................CGGCTTCCTGAGCAGATATCTCAG..2490.1110100000000
..............................................................................ACTTGAACACATTTGTTGCTAGTTCCGG.....................................................2890.1110100000000
...................................................................................................................................TACGGCTTCCTGAGCAGATATAA.....2390.1110100000000
........................................................TTGCTCTGGAGGGAAAGTT....................................................................................1990.1110100000000
................................................................................TTGAACACATTTGTTGCTAGT..........................................................2190.1110100000000
..................................TGGATTTGAGCATTCGAACTCGTT.....................................................................................................2490.1110100000000
..........................................................GCTCTGGAGGGAAAGTATTTACTT.............................................................................2490.1110100000000
.............................................................................TACTTGAACACATTTGTTGCTAGTTCCG......................................................2890.1110100000000
...................................................................................................................................TACGGCTTCCTGAGCAGATATCTCAGA.2790.1110100000000
..................................TGGATTTGAGCATTCGAACTCGTTGC...................................................................................................2690.1110000000010
....................................GATTTGAGCATTCGAACTCGTTGCT..................................................................................................2590.1110100000000
.............................................................................TACTTGAACACATTTGTTGCTAGTAA........................................................2690.1110000000010
droPer2
TCCTG------ATGCATATTTTGTAGGATGCTTGTGGATTTGAGCATTCGAATTCGTTGCTCTGGAGGG-AAGTATTTACTTGAACACATTTGTTGCTAGTTCCGGACAACGGAATGCCTAGACAACAATATACGGCTTCCTGAGCAGATATCTCAGTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................TTGTAGGATGCTTGTGGATTTGAG...................................................................................................................24201.75350310031
.....................TGTAGGATGCTTGTGGATTTGAGC..................................................................................................................24201.653311300019
.......................TAGGATGCTTGTGGATTTGAGCAT................................................................................................................24201.65332810022
............................................................................TTACTTGAACACATTTGTTGCTAGT..........................................................25191.37260260000
.......................................................................................................CGGACAACGGAATGCCTAGACAACAATA............................28101.30131300000
.....................................................................................................TCCGGACAACGGAATGCCTAGACAA.................................25111.27140140000
....................TTGTAGGATGCTTGTGGATTTGAGC..................................................................................................................25201.202401100013
..............................................TTCGAATTCGTTGCTCTGGAGGG-AAG......................................................................................2611.001000001
....................................................TTCGTTGCTCTGGAGGG-AAGTATC..................................................................................2411.001000001
...................TTTGTAGGATGCTTGTGGATTTGAG...................................................................................................................25200.85170100016
....................TTGTAGGATGCTTGTGGATTTGAGCAT................................................................................................................27200.85170500012
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAGC.............27200.80160160000
......................GTAGGATGCTTGTGGATTTGAGCAT................................................................................................................25200.75150100014
................TATTTTGTAGGATGCTTGTGGAT........................................................................................................................23200.55110000011
...........................................................................................................CAACGGAATGCCTAGACAACAATATA..........................26120.506600000
.....................................................................................................TCCGGACAACGGAATGCCTAGACAAC................................26100.505041000
.....................................................................................................TCCGGACAACGGAATGCCTAGACA..................................24110.455050000
................TATTTTGTAGGATGCTTGTGGA.........................................................................................................................22200.459000009
............................................................................TTACTTGAACACATTTGTTGCTAG...........................................................24190.428080000
...........................................................................................................CAACGGAATGCCTAGACAACAATA............................24120.425320000
......................................................................................................CCGGACAACGGAATGCCTAGACAACAA..............................27100.404040000
..............................................................................................................CGGAATGCCTAGACAACAATATACGGCT.....................28110.364220000
.....................TGTAGGATGCTTGTGGATTTGAGCA.................................................................................................................25200.357040003
............................................................................................................AACGGAATGCCTAGACAACAATA............................23120.334310000
...................TTTGTAGGATGCTTGTGGATTTGAGCAT................................................................................................................28200.306000006
.......................TAGGATGCTTGTGGATTTGAGCATT...............................................................................................................25200.306130002
...................................................................................................................TGCCTAGACAACAATATACGGCTTCC..................26110.273030000
................TATTTTGTAGGATGCTTGTGG..........................................................................................................................21200.255000005
............................................................................TTACTTGAACACATTTGTTGCTAGTTC........................................................27190.214040000
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAGCA............28200.204040000
............TGCATATTTTGTAGGATGCTTGTGGATT.......................................................................................................................28200.204040000
.......................TAGGATGCTTGTGGATTTGAGC..................................................................................................................22200.204010003
.....................TGTAGGATGCTTGTGGATTTGAGCATT...............................................................................................................27200.204000004
....................TTGTAGGATGCTTGTGGATTTGAGCA.................................................................................................................26200.204040000
.....................................................................................................TCCGGACAACGGAATGCCTAGACAACAA..............................28100.202020000
......................GTAGGATGCTTGTGGATTTGAG...................................................................................................................22200.204000004
..............................................................................................................................CAATATACGGCTTCCTGAGCAGATA........25200.204040000
...................TTTGTAGGATGCTTGTGGATTTGAGC..................................................................................................................26200.204010003
....................................................................................................TTCCGGACAACGGAATGCCTAGACAA.................................26110.182020000
.....................................................................................................TCCGGACAACGGAATGCCTAGA....................................22110.182020000
.............................................................................................................ACGGAATGCCTAGACAACAATATACGG.......................27110.182020000
.........................................................................TATTTACTTGAACACATTTGTTGCTAG...........................................................27190.163030000
.................................................................................................................................TATACGGCTTCCTGAGCAGATATCT.....25200.153030000
.....................TGTAGGATGCTTGTGGATTTGA....................................................................................................................22200.153000003
.....................TGTAGGATGCTTGTGGATTT......................................................................................................................20200.153000003
.....................TGTAGGATGCTTGTGGATTTG.....................................................................................................................21200.153000003
............TGCATATTTTGTAGGATGCTTGTGG..........................................................................................................................25200.153010002
................TATTTTGTAGGATGCTTGTG...........................................................................................................................20200.153000003
...........................................................................................TGTTGCTAGTTCCGGACAACGG..............................................22200.153030000
.....................TGTAGGATGCTTGTGGATTTGAGCAT................................................................................................................26200.153030000
................TATTTTGTAGGATGCTTGTGGATTTGA....................................................................................................................27200.153020001
.............................................................................TACTTGAACACATTTGTTGCTAG...........................................................23190.112020000
.............................................................................TACTTGAACACATTTGTTGCTAGT..........................................................24190.112020000
............................................................................TTACTTGAACACATTTGTTGCTAGTT.........................................................26190.112200000
............................................................................TTACTTGAACACATTTGTTGCTAGTTCC.......................................................28190.112020000
.............................................................................TACTTGAACACATTTGTTGCTAGTTC........................................................26190.112020000
.......................................................................................................................TAGACAACAATATACGGCTTCCTGAG..............26200.102020000
...................................................................................................................................TACGGCTTCCTGAGCAGATATCTC....24200.102020000
........................................................................................................................AGACAACAATATACGGCTTCCTGAGC.............26200.102020000
............................................................................................................................AACAATATACGGCTTCCTGAGCAGA..........25200.102020000
................TATTTTGTAGGATGCTTGTGGATTT......................................................................................................................25200.102000002
...................TTTGTAGGATGCTTGTGGATTTGA....................................................................................................................24200.102000002
.................................................................................................TAGTTCCGGACAACGGAATGCCTAGAC...................................27100.101010000
...................TTTGTAGGATGCTTGTGGATT.......................................................................................................................21200.102000002
......................................................................................................CCGGACAACGGAATGCCTAGACAACAATA............................29100.101100000
.............................................................................................TTGCTAGTTCCGGACAACGGAATG..........................................24100.101010000
.......................TAGGATGCTTGTGGATTTGAGCA.................................................................................................................23200.102010001
...................TTTGTAGGATGCTTGTGGA.........................................................................................................................19200.102000002
.......................................................................................................................TAGACAACAATATACGGCTTCCT.................23200.102010001
.....................TGTAGGATGCTTGTGGATTTGAGCATTC..............................................................................................................28200.102010001
.................................................................................TGAACACATTTGTTGCTAGTTCCGGACA..................................................28200.102020000
........................................................................................................GGACAACGGAATGCCTAGACAACAA..............................25100.101001000
.....................................................................................................TCCGGACAACGGAATGCCTAGAC...................................23110.091010000
..............................................................................................................CGGAATGCCTAGACAACAATATACGGC......................27110.091010000
............................................................................................................AACGGAATGCCTAGACAACAATATACGG.......................28110.091010000
.............................................................................................................ACGGAATGCCTAGACAACAATATACGT.......................27110.091100000
....................................................................................................................GCCTAGACAACAATATACGGCTTCC..................25110.091010000
.............................................................................................................ACGGAATGCCTAGACAACAATATACGGC......................28110.091010000
......................................................................................................CCGGACAACGGAATGCCTAGACAA.................................24110.091010000
..........................................................................................................ACAACGGAATGCCTAGACAACAATA............................25110.091100000
.............................................................................................................ACGGAATGCCTAGACAACAAT.............................21120.081010000
...........................................................................................................CAACGGAATGCCTAGACAACAAT.............................23120.081100000
.............................................................................................................ACGGAATGCCTAGACAACAATAT...........................23120.081010000
...........................................................................................................CAACGGAATGCCTAGACAACAATAG...........................25120.081001000
............................................................................................................AACGGAATGCCTAGACAACAATATA..........................25120.081100000
...............................................................................................................GGAATGCCTAGACAACAATATACGGC......................26130.081010000
...................................................................................................................TGCCTAGACAACAATATACGGC......................22130.081010000
............................................................................TTACTTGAACACATTTGTTGCTAGTA.........................................................26190.051010000
............................................................................TTACTTGAACACATTTGTTGCTA............................................................23190.051010000
.............................................................................TACTTGAACACATTTGTTGCTAGTT.........................................................25190.051010000
.......................................................................AGTATTTACTTGAACACATTTGTTGC..............................................................26190.051010000
.............................................................................TACTTGAACACATTTGTTGCTAGTTCC.......................................................27190.051010000
....................................................................................................................................ACGGCTTCCTGAGCAGATATCTCAG..25200.051010000
..................................................................................GAACACATTTGTTGCTAGTTCCGGACAAC................................................29200.051100000
...................TTTGTAGGATGCTTGTGGATTTG.....................................................................................................................23200.051000001
..........................................................................................TTGTTGCTAGTTCCGGACAACGG..............................................23200.051010000
................TATTTTGTAGGATGCTTGTGGAA........................................................................................................................23200.051010000
.........................................................................TATTTACTTGAACACATTTGTTG...............................................................23200.051010000
............................................................................TTACTTGAACACATTTGTTGC..............................................................21200.051010000
.......................TAGGATGCTTGTGGATTTGAGCATTC..............................................................................................................26200.051010000
...................TTTGTAGGATGCTTGTGGATTTGAGTC.................................................................................................................27200.051000001
.........................................................................................TTTGTTGCTAGTTCCGGACAACGGAAA...........................................27200.051010000
........................................................................................................................AGACAACAATATACGGCTTCCTGAG..............25200.051010000
.CCTG------ATGCATATTTTGTAGGATGCTTG.............................................................................................................................27200.051010000
.......................TAGGATGCTTGTGGATTTGT....................................................................................................................20200.051000001
.................................................................................................................................TATACGGCTTCCTGAGCAGATATCTC....26200.051010000
...................TTTGTAGGATGCTTGTGGATTTGAGCA.................................................................................................................27200.051000001
...................................................................................................................................TACGGCTTCCTGAGCAGATATCTCAGTG28200.051010000
.....................TGTAGGATGCTTGTGGATTTGAG...................................................................................................................23200.051010000
................TATTTTGTAGGATGCTTGTGGATTTG.....................................................................................................................26200.051000001
........................AGGATGCTTGTGGATTTGAGCATT...............................................................................................................24200.051010000
.................................................................................................................................TATACGGCTTCCTGAGCAGATATCTCAG..28200.051010000
..................TTTTGTAGGATGCTTGTGGATTTGAG...................................................................................................................26200.051000001
.........................GGATGCTTGTGGATTTGAGCA.................................................................................................................21200.051000001
............TGCATATTTTGTAGGATGCTTGTG...........................................................................................................................24200.051010000
....................TTGTAGGATGCTTGTGGA.........................................................................................................................18200.051000001
.................................................................................................................................TATACGGCTTCCTGAGCAGATATCTCA...27200.051010000
....................TTGTAGGATGCTTGTGGAT........................................................................................................................19200.051000001
...................................................................................................................................TACGGCTTCCTGAGCAGATATCT.....23200.051100000
.CCTG------ATGCATATTTTGTAGGATGCT...............................................................................................................................25200.051000001
.......................TAGGATGCTTGTGGATTTGAG...................................................................................................................21200.051000001
.......................TAGGATGCTTGTGGATTTGAA...................................................................................................................21200.051010000
...................TTTGTAGGATGCTTGTGGATTTGAGA..................................................................................................................26200.051100000
......................GTAGGATGCTTGTGGATTTGA....................................................................................................................21200.051000001
....................TTGTAGGATGCTTGTGGATTTGAAA..................................................................................................................25200.051010000
........................................................................................ATTTGTTGCTAGTTCCGGAC...................................................20200.051000001
.................................................................................TGAACACATTTGTTGCTAGTTCCGGA....................................................26200.051010000
....................TTGTAGGATGCTTGTGGATTTGAGA..................................................................................................................25200.051010000
.......................................................................................................................TAGACAACAATATACGGCTTCC..................22200.051010000
.........................................................................TATTTACTTGAACACATTTGTTGC..............................................................24200.051010000
.................................................................................TGAACACATTTGTTGCTAGTTCCGGAC...................................................27200.051010000
.....................................................TCGTTGCTCTGGAGGG-AA.......................................................................................18200.051000001
......................................................................................ACATTTGTTGCTAGTTCCGGACAAC................................................25200.051010000
.................ATTTTGTAGGATGCTTGTGGATT.......................................................................................................................23200.051010000
...TG------ATGCATATTTTGTAGGATGCTT..............................................................................................................................24200.051001000
......................GTAGGATGCTTGTGGATTTGAGA..................................................................................................................23200.051010000
.....................TGTAGGATGCTTGTGGATTTGAAT..................................................................................................................24200.051000001
.............GCATATTTTGTAGGATGCTTGTGGATT.......................................................................................................................27200.051010000
................TATTTTGTAGGATGCTTGTGGATTC......................................................................................................................25200.051010000
...TG------ATGCATATTTTGTAGGATGCTTG.............................................................................................................................25200.051010000
droAna3
TAGTT------TGGTAGTCGCTCTAATTCTTCATTTAAGCGAGCCAATCGAACTCGTTTGTCTGGATGGCAAGTGTTAATAAAAATTGTATCTTCACTTGTCTCCGACATATGCATACCCAAAATATTGAATGGTGCTTCTTGGGCTGATATT--AGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................AATCGAACTCGTTTGTCTGGATGGCAAA......................................................................................28200.408062000
..............................................ATCGAACTCGTTTGTCTGGATGG..........................................................................................23200.255500000
...............................................TCGAACTCGTTTGTCTGGATGGCAAG......................................................................................26200.255500000
...............................................TCGAACTCGTTTGTCTGGATG...........................................................................................21200.153030000
.............................................AATCGAACTCGTTTGTCTGGAT............................................................................................22200.102200000
..............................................ATCGAACTCGTTTGTCTGGATGGCAAG......................................................................................27200.102002000
................................................CGAACTCGTTTGTCTGGATGGCAAGTG....................................................................................27200.102110000
...........................................CCAATCGAACTCGTTTGTCTGGAT............................................................................................24200.051010000
.......................................CGAGCCAATCGAACTCGTTTGTCTGGA.............................................................................................27200.051100000
...............................................TCGAACTCGTTTGTCTGGATGGCAAGTG....................................................................................28200.051010000
.............................................AATCGAACTCGTTTGTCTGGATTT..........................................................................................24200.051001000
...............................................TCGAACTCGTTTGTCTGGATGG..........................................................................................22200.051000100
.............................................AATCGAACTCGTTTGTCTGGATGGCAAC......................................................................................28200.051010000
...............................................TCGAACTCGTTTGTCTGGAT............................................................................................20200.051100000
................................................CGAACTCGTTTGTCTGGATGGCAAG......................................................................................25200.051100000
.................................................GAACTCGTTTGTCTGGATGG..........................................................................................20200.051010000
....................................................CTCGTTTGTCTGGATGGC.........................................................................................18200.051100000
............................................CAATCGAACTCGTTTGTCTGGATGGCAAG......................................................................................29200.051010000
..............................................ATCGAACTCGTTTGTCTGGA.............................................................................................20200.051010000
............................................CAATCGAACTCGTTTGTCTGGATGT..........................................................................................25200.051001000
.......................................CGAGCCAATCGAACTCGTTTGTCT................................................................................................24200.051100000
droBip1
TTGTT------TGGTAGAAT-TCTAATTCCTCATTTGAGCGAGCCAATCTAACTCGTTTGTCTGGATGGCAAGTGTTTATAAAAATAGTACCTTTACTTGCCTCTGACATATGCAGACCCAAAATATTGTAAGCTGCTTCTTGGGCTGATATTTCTGTASizeHit CountTotal NormTotal
No Reads
droKik1
TTCCC------AGGAAGCTGCTCTAATTCTCTATTAGATCGCACTATCCGAACTCTTTTATCTGGATGGCAAGTGTTTACAA-AATATTTCCTTCACTTGCCTCAGACATGTGTAAGCCTAAAATGTTGTAGGCTGCTTCTTGGGCTGATATTTCCGTASizeHit CountTotal NormTotal
No Reads
droFic1
TCTCC------TGGAAGATGTTCTAGTTCTCTGTTGGATCGAACTATGCGAACTCTTTTATCTGGATGGCAAGTGTTTATAAAAATATTTCCTTCACTAGCCTCAGACATGTGTAAGCCTAAAATATTGTAGGCAGCTTCTTGGGCTGATATCTCCGTASizeHit CountTotal NormTotal
No Reads
droEle1
TTGTC------AGGAAGCTGAGCTAGTTCCTTATTAGATCGTACTATCCGCACTCTTTTATCTGGATGGCAAGTGTCAATACAAATATTTCATTCGCTAGCCTCTAAAATGTGTAACCCCAAAATGTTGTAAGCTGCTTCTTGGGCAGATATCTCCGTASizeHit CountTotal NormTotal
No Reads
droRho1
TCTGA------GGGCAATCGCTCCAAATCCTTTTTTGACTTGACCATTCGTACTCTTTGCTCAGGAAGCGATGTATTTTTGAACATGCTTCCGTTACTGGTTTCTGACAAATGTAGCCCTAAAATACTGTAAACAGCTTCCTGAGCCGATTTTTCGGTTSizeHit CountTotal NormTotal
No Reads
droBia1
TTCAA------AGGCATATTTTGCAGAATGCTTGTAGGTCCAAGCATACGAACTCGTTGTTCTGGAGGGAAGGTGTTGATATGAATTG-ATTATTGCTTGTTTCAGACAACGTCAATCCCAGACAACAATATACGGCCTCCTGAGCAGAGATCTCAGTASizeHit CountTotal NormTotal
No Reads
droTak1
TCTAA------GGGCAGTCGCTCCAACTCCTTTTTTGACTTGACCATTCGGACTCTTTGCTCAGGAAGTGATGTATTTATAAACTTGCTTCCGTTACTGGTTTCTGACAAATGCAGCCCCAAAATATTGTAAACAGCTTCCTGGGCTGATATTTCGGTTSizeHit CountTotal NormTotal
No Reads
droEug1
TTCGA------AGGCATATTTTGAAGGTCGCGTGTAGGTTTTAACATACGAACTCGTTGTTCTGGAGGGAAGGTGTTAATGTAAACGCATTTATTACTAGTTTCCGATAACGCCATTCCCAGACAACAATATACGGCTTCCTGAGCTGATATCTCAGTGSizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------------------------------------------------------------------------------------------------------ACGGCTTCCTAGGCAGATATCTGAGTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................CCTAGGCAGATATCTGAGTG2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTCTG------AGGCATATTTTGAAGGTCGCGTGTAGGTCTAAGCATACGAACTCGTTGTTCTGGAGGGAAGGTGTTGATATGAACGCACTTATTACTTGCTTCGGACAACGCCATTCCCAGACAACAATACACGGCTTCCTGAGCAGAAATCTCAGTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................TGAAGGTCGCGTGTT...........................................................................................................................1560.33200000000110000000
droYak3
TTCTG------AGGCATATTTTGAAGGTCGCGTGTAGGTCTAAGCATACGAACTCGTTGTTCTGGAGAGAAGGTGTTGATATGAACGCACTTATTACTTGCTTCGGACAACGCCATTCCCAGACAACAATACACGGCTTCCTGAGCAGATATCTCAGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................TCCCAGACAACAATACACGGCTTCCT.................26201.8036036000000000
..................................TAGGTCTAAGCATACGAACTCGTTGTTC.................................................................................................28201.7535035000000000
..................................TAGGTCTAAGCATACGAACTCGTTGTT..................................................................................................27201.2024010400010009
..................................TAGGTCTAAGCATACGAACTCGTT.....................................................................................................24201.1022047000000011
..................................TAGGTCTAAGCATACGAACTCGTTGT...................................................................................................26200.9018002000000016
........................................TAAGCATACGAACTCGTTGTTCTGGAG............................................................................................27200.7515000100000014
....................................................................................................................TCCCAGACAACAATACACGGCTTCCTG................27200.7014014000000000
..........................................................GTTCTGGAGAGAAGGTGTTGATATG............................................................................2520.50101000000000
.........................................................................................................................GACAACAATACACGGCTTCCTGAGCAGA..........28200.45903000000006
...................................AGGTCTAAGCATACGAACTCGTTG....................................................................................................24200.45909000000000
.....................................................................................................................CCCAGACAACAATACACGGCTTCC..................24200.30606000000000
....................................................................................................................TCCCAGACAACAATACACGGCTTCCTGA...............28200.25505000000000
......................................TCTAAGCATACGAACTCGTTGTTCT................................................................................................25200.20404000000000
..................................TAGGTCTAAGCATACGAACTCGTTG....................................................................................................25200.20400031000000
................................TGTAGGTCTAAGCATACGAACTCGT......................................................................................................25200.15300300000000
...........................................................................................TATTACTTGCTTCGGACAACGCCATT..........................................26200.15303000000000
................TATTTTGAAGGTCGCGTGTAGGTC.......................................................................................................................24200.15302000010000
..........................................................................................TTATTACTTGCTTCGGACAACGCCAT...........................................26200.15302100000000
...........................................................................................TATTACTTGCTTCGGACAACGCCAT...........................................25200.15300000030000
...................................AGGTCTAAGCATACGAACTCGTTGTTC.................................................................................................27200.15303000000000
.....................TGAAGGTCGCGTGTAGGTCTAAGCA.................................................................................................................25200.10202000000000
...........................................................................................TATTACTTGCTTCGGACAACGCC.............................................23200.10200100010000
.................................................................................................................................TACACGGCTTCCTGAGCAGATATC......24200.10202000000000
.......................AAGGTCGCGTGTAGGTCTAAGCATACG.............................................................................................................27200.10201000000001
............................................................................................ATTACTTGCTTCGGACAACGCCAT...........................................24200.10202000000000
...........................................................................................TATTACTTGCTTCGGACAACGCCA............................................24200.10202000000000
.................................................................................................................................TACACGGCTTCCTGAGCAGATATCT.....25200.10202000000000
...................................AGGTCTAAGCATACGAACTCGTTGT...................................................................................................25200.10202000000000
...........................................................................................TATTACTTGCTTCGGACAACGC..............................................22200.05101000000000
......................................................................................................................CCAGACAACAATACACGGCTTCCT.................24200.05101000000000
....................................GGTCTAAGCATACGAACTCGTTG....................................................................................................23200.05101000000000
..............CATATTTTGAAGGTCGCGTGTAGGTC.......................................................................................................................26200.05101000000000
.....................................................................................................................CCCAGACAACAATACACGGCTT....................22200.05101000000000
.................................GTAGGTCTAAGCATACGAACTCGTTG....................................................................................................26200.05101000000000
.........................GGTCGCGTGTAGGTCTAAGCATACG.............................................................................................................25200.05101000000000
..................................................................................................TGCTTCGGACAACGCCATTCCCAGAC...................................26200.05101000000000
..............................CGTGTAGGTCTAAGCATACGAACTCGT......................................................................................................27200.05101000000000
....................TTGAAGGTCGCGTGTAGGTCTAAGCA.................................................................................................................26200.05101000000000
.............................................................................................TTACTTGCTTCGGACAACGCCATTCC........................................26200.05101000000000
....................................................................................................................TCCCAGACAACAATACACGGCT.....................22200.05100100000000
..............................................................................................................................CAATACACGGCTTCCTGAGC.............20200.05100100000000
....................................................................................................................TCCCAGACAACAATACACGG.......................20200.05100000000001
.......................................CTAAGCATACGAACTCGTTG....................................................................................................20200.05101000000000
.TCTG------AGGCATATTTTGAAGGTCGCGTG.............................................................................................................................27200.05101000000000
...............................................................................................ACTTGCTTCGGACAACGCCATTCCCA......................................26200.05101000000000
.............................GCGTGTAGGTCTAAGCATACGAAC..........................................................................................................24200.05100010000000
............................................................................................................AACGCCATTCCCAGACAACAATACACGGC......................29200.05101000000000
..........................................................................................TTATTACTTGCTTCGGACAACGCCA............................................25200.05101000000000
....................................GGTCTAAGCATACGAACTCGTTGTTC.................................................................................................26200.05101000000000
....................................................................................................................TCCCAGACAACAATACACGGC......................21200.05101000000000
..............................................................................................TACTTGCTTCGGACAACGCCATTCCC.......................................26200.05101000000000
TTCTG------AGGCATATTTTGAAGGTCGCG...............................................................................................................................26200.05101000000000
.....................TGAAGGTCGCGTGTAGGTCTAAGCATA...............................................................................................................27200.05100000010000
...................................AGGTCTAAGCATACGAACTCGT......................................................................................................22200.05101000000000
....................................................................................................................TCCCAGACAACAATACACGGCC.....................22200.05101000000000
....................................................................................................................TCCCAGACAACAATACACGGCTTCCC.................26200.05100100000000
......................................TCTAAGCATACGAACTCGTTGTTCTG...............................................................................................26200.05101000000000
..................................................................................................TGCTTCGGACAACGCCATTCCCAGACA..................................27200.05101000000000
...................TTTGAAGGTCGCGTGTAGGTCTAAGCA.................................................................................................................27200.05101000000000
....................................................................................................................TCCCAGACAACAATACACGGCTTCCTGAG..............29200.05101000000000
..................................................................................................TGCTTCGGACAACGCCATTCCCAGA....................................25200.05100100000000
............................................................................................................................AACAATACACGGCTTCCTGAGCAGA..........25200.05101000000000
............................................................................TGATATGAACGCACTTATTACTTGCTTC.......................................................28200.05101000000000
....................TTGAAGGTCGCGTGTAGGTCTAAGCATA...............................................................................................................28200.05100000010000
............................CGCGTGTAGGTCTAAGCATACGAAC..........................................................................................................25200.05101000000000
...................................................................................................................TTCCCAGACAACAATACACGGCT.....................23200.05101000000000
...........................TCGCGTGTAGGTCTAAGCATACGAAC..........................................................................................................26200.05100100000000
..................................TAGGTCTAAGCATACGAACTCGTC.....................................................................................................24200.05100100000000
...............ATATTTTGAAGGTCGCGTGTA...........................................................................................................................21200.05100000010000
........................................TAAGCATACGAACTCGTTGTTCTGG..............................................................................................25200.05101000000000
.............................................................................................TTACTTGCTTCGGACAACGCCATTCCCA......................................28200.05101000000000
...........................................................................TTGATATGAACGCACTTATTACTTGC..........................................................26200.05101000000000
droEre2
GTGGAATTCCGAGGCATATTTAAAAGG-------------------------TCCAGTGTTCTGGAAGGAAGGTGTTTATATACA--CACCTAGTACTAGTTTCTGACAACGCCATTCACAGACAATAATATACGGTTTCCTCAGTAGATATCTCAGTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/15/2015 at 03:12 PM