ID:dmo_318 |
Coordinate:scaffold_6540:6634786-6634848 + |
Confidence:confident |
Class:Testes-restricted |
Genomic Locale:intergenic |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in alignment | mismatch in read |
![]() |
![]() |
![]() |
![]() |
![]() |
| -33.9 | -33.9 |
![]() |
![]() |
intergenic
No Repeatable elements found
|
TGTGTGTGAGTGCCCGTGAATAGAGTCCCTTTAAATGGTTATACAATATTTATTGCATCTATAGACTGAGCTTTGGTCTTTGTATAGTGAGCCAGTCTATACATGCAGTAAATGATGTTGGCTCTGATCTAATGTCAACTGCAAAGGAACCAAGCAATGGCCA
***********************************.(((((.(((.((((((((((((.(((((((((.((((...............))))))))))))).)))))))))))).))))))))....************************************ |
Read size | # Mismatch | Hit Count | Total Norm | Total | V110 male body |
M046 female body |
M060 embryo |
V056 head |
V049 head |
V041 embryo |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................TATTGCATCTATAGACTGAG............................................................................................. | 20 | 0 | 1 | 1764.00 | 1764 | 1722 | 21 | 1 | 9 | 11 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTT.......................................................................................... | 23 | 0 | 1 | 1027.00 | 1027 | 859 | 54 | 86 | 9 | 12 | 7 |
| ..................................................TATTGCATCTATAGACTGAGCT........................................................................................... | 22 | 0 | 1 | 964.00 | 964 | 917 | 35 | 2 | 5 | 5 | 0 |
| ..................................................TATTGCATCTATAGACTGAGC............................................................................................ | 21 | 0 | 1 | 595.00 | 595 | 556 | 19 | 7 | 7 | 5 | 1 |
| ..................................................TATTGCATCTATAGACTGAGCTTT......................................................................................... | 24 | 0 | 1 | 282.00 | 282 | 259 | 10 | 5 | 5 | 1 | 2 |
| ..................................................TATTGCATCTATAGACTGAGCTTC......................................................................................... | 24 | 1 | 1 | 135.00 | 135 | 126 | 6 | 3 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGT............................................................................................ | 21 | 1 | 1 | 94.00 | 94 | 93 | 0 | 0 | 1 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTCT........................................................................................ | 25 | 2 | 1 | 30.00 | 30 | 28 | 2 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTC.......................................................................................... | 23 | 1 | 1 | 29.00 | 29 | 24 | 0 | 5 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTATACATGCAGTAAA................................................... | 22 | 0 | 1 | 25.00 | 25 | 9 | 4 | 7 | 0 | 0 | 5 |
| ..........................................................................................GCCAGTCTATACATGCAGTAA.................................................... | 21 | 0 | 1 | 23.00 | 23 | 14 | 3 | 4 | 0 | 1 | 1 |
| ..................................................TATTGCATCTATAGACTGAGCTTTC........................................................................................ | 25 | 1 | 1 | 23.00 | 23 | 22 | 1 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTA.......................................................................................... | 23 | 1 | 1 | 20.00 | 20 | 13 | 4 | 2 | 1 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGA.............................................................................................. | 19 | 0 | 1 | 18.00 | 18 | 14 | 2 | 0 | 1 | 1 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTT........................................................................................ | 25 | 1 | 1 | 14.00 | 14 | 13 | 0 | 0 | 1 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGA............................................................................................ | 21 | 1 | 1 | 12.00 | 12 | 10 | 2 | 0 | 0 | 0 | 0 |
| ...................................................ATTGCATCTATAGACTGAGCTT.......................................................................................... | 22 | 0 | 1 | 9.00 | 9 | 0 | 9 | 0 | 0 | 0 | 0 |
| .................................................TTATTGCATCTATAGACTGAGCT........................................................................................... | 23 | 0 | 1 | 6.00 | 6 | 4 | 0 | 2 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTATACATGCAGT...................................................... | 19 | 0 | 1 | 6.00 | 6 | 5 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTCT......................................................................................... | 24 | 1 | 1 | 6.00 | 6 | 6 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTA......................................................................................... | 24 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTTT....................................................................................... | 26 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TACTGCATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 1 | 0 | 3 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTCA........................................................................................ | 25 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAT............................................................................................. | 20 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTGT......................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ...................................................ATTGCATCTATAGACTGAG............................................................................................. | 19 | 0 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ..................................................CATTGCATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 3.00 | 3 | 2 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTCA......................................................................................... | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGGCTGAGCT........................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTG......................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTCC....................................................................................... | 26 | 2 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
| .................................................TTATTGCATCTATAGACTGAG............................................................................................. | 21 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTG.......................................................................................... | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTTCATCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCC........................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 1 | 0 | 2 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTCC........................................................................................ | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGTT........................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TGTTGCATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 3.00 | 3 | 1 | 0 | 2 | 0 | 0 | 0 |
| ..................................................GATTGCATCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGAT........................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTTG....................................................................................... | 26 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTCTC....................................................................................... | 26 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTACATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGAATGAGCTT.......................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTTAG............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGGCTGAG............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGTTT.......................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGACTT........................................................................................... | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................GATTGCATCTATAGACTGAGC............................................................................................ | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATATACTGAG............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGTAT.......................................................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTTCATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTCCATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGATC............................................................................................ | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTCCATCTATAGACTGAGCTTC......................................................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTAT......................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTCAAT...................................................................................... | 27 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTATACATGCAGTA..................................................... | 20 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTAAA....................................................................................... | 26 | 3 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................CATTGCATCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .................................................TTATTGCATCTATAGACTGAGC............................................................................................ | 22 | 0 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTCAG............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATATACTGAGCT........................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ...................................................ATTGCATCTATAGACTGAGC............................................................................................ | 20 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTTAGCT........................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTCCATCTATAGACTGAGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGG............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTCTAT....................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCGT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................................................TATTGCATCTATCGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTATACATGCAGCAA.................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................................................TATTGCATCTATAGACTGAGCTTTCCC...................................................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTTTAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCAGTGATAGACTGAGCTT.......................................................................................... | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..................................................TATTGCATCTATAGAATGGG............................................................................................. | 20 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGATCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATAGCATCTATAGACTGAGCC........................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCGTCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGATTC......................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTATACATGCAGTAATCC................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACCGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TCTTGCATCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTTCATCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................AATTGCATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCAA.......................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCCATAGACTGAGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TACTGCATCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACCGAGAT........................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................GTGAGCCAGTCTATACATGCAGTAAA................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGGGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................GCCGGTCTATACATGCAGTAAA................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTACAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATAGCATCTATAGACTGAGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTCCATCTATAGACTGAGCTTCT........................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGTCTGGGG............................................................................................ | 21 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................................................TATTGCATCTATAGACTCAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTCTAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAAC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCACCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTTGT...................................................................................... | 27 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................ATTGCATCTATAGACTGAGCT........................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTCCT........................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTCC......................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................AATTGCATCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCACCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTTCACCTATAGACTGAG............................................................................................. | 20 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTTC....................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCA........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTGT........................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCGTTTATAGACTGCGCTT.......................................................................................... | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................................................TATATCATCTATAGACTGAGCTT.......................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TACTGCATCTATAGACTGAGCTC.......................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTGC....................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTTAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGATCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCTTCTATAGACTGAGCTTCT........................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATCGCATCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTACAGACTGAGCTTT......................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTATACATGCAGTAAT................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGATTT......................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................TATCATCTATAGACTGAGCTT.......................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGCGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..................................................TATTGCATCTATAGACTGAGTA........................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTGG....................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTAT........................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................TGAGCCAGTCTATACATGCAG....................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATCGCATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTTCATCTATAGACTGAGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................ATTGCATCTATAGACTGAGCTTC......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCACCTATAGACTGAGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTCAA....................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGGATCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAA............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTAAGCTTT......................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTTAGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATCGCATCTATAGACTGAGCTTCT........................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TGCTGCATCTATAGACTGAGC............................................................................................ | 21 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATATACTGAGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTTCATCTATAGAGTGAGCTC.......................................................................................... | 23 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATATATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATATACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCCATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATCGCATCTATAGACTGAGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGCATCGATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTCCATCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGTGC............................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..................................................TCTTGCATCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTAA........................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATGGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATGGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTGTACATGCAGTAAA................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTACATCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTCTTTT...................................................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCGTCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATGGCATCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATCGCATCTATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGATTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCGTCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATGGCATCGATAGACTGAGCT........................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................................GCCAGTATATACATGCAGGAAA................................................... | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................................................TATTGCATCTATAGACTGAGCTAA......................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATGGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGCG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..................................................TATTGCATGTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTATACATGCAGTAAC................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................AATTGCATCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TGTTGCATCTATAGACTGAGCTA.......................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TATTGTATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCACCTATAGACTGAGCTTT......................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................TTATTGCATCTATAGACTGAGCTT.......................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGCTTTAG....................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTACATCTATAGACTGAG............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATATATAGACTGAGCT........................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGATCTTG......................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..................................................TATTGCATCTGTAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGAATCTATAGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................GCCAGTCTATACATGCAGTAT.................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTCAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TTTTGCATCTATAGACTGAGCTTTT........................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTGAGATT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATTGACTGAGCTT.......................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATACCCTGAG............................................................................................. | 20 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ............................................................ATAGACAGACCTTAGGTCTT................................................................................... | 20 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...................................................TATTCATCTATAGACTGAGCTTT......................................................................................... | 23 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................TATTGCATCTATAGACTAG.............................................................................................. | 19 | 2 | 6 | 0.17 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................CAGTAAGTGATGTTGACGC....................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
|
ACACACACTCACGGGCACTTATCTCAGGGAAATTTACCAATATGTTATAAATAACGTAGATATCTGACTCGAAACCAGAAACATATCACTCGGTCAGATATGTACGTCATTTACTACAACCGAGACTAGATTACAGTTGACGTTTCCTTGGTTCGTTACCGGT
************************************.(((((.(((.((((((((((((.(((((((((.((((...............))))))))))))).)))))))))))).))))))))....*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | V110 male body |
|---|---|---|---|---|---|---|
| .........................................................................................TCGGTCAGATATCTACGTTAT..................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 |
| Species | Coordinate | ID | Type | Alignment |
|---|---|---|---|---|
| droMoj3 | scaffold_6540:6634736-6634898 + | dmo_318 | confident | TGTGTGTGAGTGCCCGTGAATAGAGTCCCTTTAAATGGTTATACAATATTTATTGCATCTATAGACTGAGCTTTGGTCTTTGTATAGTGAGCCAGTCTATACATGCAGTAAATGATGTTGGCTCTGATCTAATGTCAACTGCAAAGGAACCAAGCAATGGCCA |
| droVir3 | scaffold_12855:6286781-6286909 + | dvi_197 | confident | CGTGCGTGTTTGTCTGTGT---GTGTCC-TTCATATGGCAATACAATATTTATTGCATCTATAGACTGAGCTTTCCTTTTT-AATATAAAGCCAGGCTTTGGATGCACTAAATGGAGTTACCTTTAAGCGAATG----------------------------- |
| droGri2 | scaffold_14906:7794704-7794747 - | TGCA----TTTGTCA----GTAAAGTCC-T---AATGGTAAACCCATATTTGTGGC----------------------------------------------------------------------------------------------------------- |
| Species | Read alignment | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| droMoj3 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| droVir3 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| droGri2 |
|
Generated: 10/20/2015 at 07:00 PM