ID:

dmo_276

 Coordinate:

scaffold_6686:2849-2927 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.8 -19.4 -19.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GCACCCTTGAAAATTCCAAAACTCAGCGACACAAGGTGGCTATCATTCGAAATTTCAGTATCGCGCATCGAGGATCAGTGGGATGAATTTAAATTGCACTTTGCCTTTGTCGCGACAAAAGAAAAGTGTCGCAATGCTAAAATTTTGCATTCATTTTATGAGGATAGCAAAAATAGGCT
***********************************.........................(((((.((.((((...((((.(((........))).))))...)))).))))))).....*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body
..................................................AATTTCAGTATCGCGCATCGAGG.......................................................................................................... 23 0 1 24.00 24 20 2 1 1
..................................................AATTTCAGTATCGCGCATCGAGGA......................................................................................................... 24 0 1 11.00 11 10 1 0 0
..................................................AATTTCAGTATCGCGCATCGAGGATC....................................................................................................... 26 0 1 7.00 7 4 3 0 0
..................................................AATTTCAGTATCGCGCATCGAGGAT........................................................................................................ 25 0 1 6.00 6 5 1 0 0
........GAAAATTCCAAAACTCAGCGACAC................................................................................................................................................... 24 0 1 5.00 5 4 1 0 0
..................................................AATTTCAGTATCGCGCATCGA............................................................................................................ 21 0 1 4.00 4 4 0 0 0
........GAAAATTCCAAAACTCAGCGACACAAG................................................................................................................................................ 27 0 1 4.00 4 2 1 1 0
........GAAAATTCCAAAACTCAGCGACACA.................................................................................................................................................. 25 0 1 4.00 4 3 1 0 0
.................................................................................GATGAATTTAAATTGCACTTTGCC.......................................................................... 24 0 1 3.00 3 1 2 0 0
........GAAAATTCCAAAACTCAGCGACA.................................................................................................................................................... 23 0 1 3.00 3 3 0 0 0
.................................................................................GATGAATTTAAATTGCACTTTGCCT......................................................................... 25 0 1 2.00 2 1 1 0 0
........GAAAATTCCAAAACTCAGCGACACAA................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0
........................................................................................TTAAATTGCACTTTGCCTTTGTCGCGACA.............................................................. 29 0 1 2.00 2 2 0 0 0
........GAAAATTCCAAAACTCAGCGACACAAGG............................................................................................................................................... 28 0 1 2.00 2 2 0 0 0
...................................................ATTTCAGTATCGCGCATCGAGGA......................................................................................................... 23 0 1 2.00 2 2 0 0 0
..................................................AATTTCATTATCGCGCATCGAGG.......................................................................................................... 23 1 1 1.00 1 1 0 0 0
...................................................ATTTCAGTATCGCGCATCGAGG.......................................................................................................... 22 0 1 1.00 1 1 0 0 0
.................................................................................GATGAATTTAAATTGCACTTTGCCTT........................................................................ 26 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................TGAGGATAGCAAAAATAGGCT 21 0 1 1.00 1 1 0 0 0
..................................................AGTTTCAGTATCGCGCATCGAGG.......................................................................................................... 23 1 1 1.00 1 0 1 0 0
.........................................................................................................TTTGTCGCGACAAAAGAAAAGTG................................................... 23 0 1 1.00 1 1 0 0 0
.........AAAATTCCAAAACTCAGCGACACAAGG............................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
....................................................................................................................................................ATTCATTTTATGAGGATAGCAAAAATA.... 27 0 1 1.00 1 1 0 0 0
............................................................................................ATTGCACTTTGCCTTTGTCGCGACAAA............................................................ 27 0 1 1.00 1 1 0 0 0
.............................................................................GTGGGATGAATTTAAATTGCACTTTGCC.......................................................................... 28 0 1 1.00 1 1 0 0 0
..................................................AATTTCAGTATCGCGCATCGAGC.......................................................................................................... 23 1 1 1.00 1 1 0 0 0
..................................................AATTTCAGTATCGCGCATC.............................................................................................................. 19 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................CATTTTATGAGGATAGCAAAA....... 21 0 1 1.00 1 1 0 0 0
............................................................................................................................................................TATGAGGATAGCAAAAATAGGCT 23 0 1 1.00 1 1 0 0 0
.................................................CAATTTCAGTATCGCGCATCGAGGA......................................................................................................... 25 1 1 1.00 1 0 1 0 0
........GAAAATTCCAAAACTCACCGACACA.................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0
....................................................................................................................................................ATTCATTTTATGAGGATAGC........... 20 0 1 1.00 1 1 0 0 0
.............................................................................GTGGGATGAATTTAAATTGCACTTTGC........................................................................... 27 0 1 1.00 1 1 0 0 0
..................................................AATTTCAGTATCGCGCATCGAG........................................................................................................... 22 0 1 1.00 1 1 0 0 0
..............................................................................................TTCACTTTGCCTTTGTCGCGAC............................................................... 22 1 1 1.00 1 0 1 0 0
........GAAAATTCCAAAATTCAGCGACAC................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0
..........................................TCATTCGAAATTTCAGTATCGCG.................................................................................................................. 23 0 1 1.00 1 1 0 0 0
...............................................................................GGGATGAATTTAAATTGCACTTTGCC.......................................................................... 26 0 1 1.00 1 1 0 0 0
..................................................AATTTCAGTATCGCGCATCGAGGAC........................................................................................................ 25 1 1 1.00 1 0 1 0 0
..................................................AATTTCAGTATCGCGCATCGAGGATCA...................................................................................................... 27 0 1 1.00 1 1 0 0 0
..............TCCAAAACTCAGCGACACAAGGTGG............................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
...........AATTCCAAAACTCAGCGACACAAGGTTC............................................................................................................................................ 28 2 1 1.00 1 0 1 0 0
...................................................ATTTCAGTATCGCGCATCGAGGAA........................................................................................................ 24 1 1 1.00 1 1 0 0 0
..............................................................................................TGCACTTTGCCTTTGTCGCGACA.............................................................. 23 0 1 1.00 1 1 0 0 0
.........AAAATTCCAAAACTCAGCGACACA.................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
......................................................TCAGTATCGCGCATCGAGGATCA...................................................................................................... 23 0 1 1.00 1 1 0 0 0
..................................................AATTTCAGTATGGCGCATCGAGGA......................................................................................................... 24 1 1 1.00 1 1 0 0 0
.....AATGAAAATTCCAAAACTCAGCGACA.................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0
.................................................................................GATGAATTTAAATTGCACTTTGCCTTTG...................................................................... 28 0 1 1.00 1 1 0 0 0
.....................................................................GAGGATCAGTGGAATAAATT.......................................................................................... 20 2 3 0.33 1 1 0 0 0
.....................................................................GAGGATCAGTTGGCTGAATTC......................................................................................... 21 3 4 0.25 1 0 0 0 1

Anti-sense strand reads

CGTGGGAACTTTTAAGGTTTTGAGTCGCTGTGTTCCACCGATAGTAAGCTTTAAAGTCATAGCGCGTAGCTCCTAGTCACCCTACTTAAATTTAACGTGAAACGGAAACAGCGCTGTTTTCTTTTCACAGCGTTACGATTTTAAAACGTAAGTAAAATACTCCTATCGTTTTTATCCGA
***********************************************************.........................(((((.((.((((...((((.(((........))).))))...)))).))))))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
..................................CCACCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 26 0 1 468.00 468 214 252 2 0
.................................TCCACCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 27 0 1 43.00 43 30 13 0 0
.....................................CCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 23 0 1 25.00 25 11 13 0 1
..................................CCACCGATAGTAAGCTTTAAAGTCA........................................................................................................................ 25 0 1 23.00 23 21 2 0 0
...................................CACCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 25 0 1 22.00 22 5 17 0 0
................................................................CGTAGCTCCTAGTCACCCTACTTAAAT........................................................................................ 27 0 1 16.00 16 11 5 0 0
.................................................................GTAGCTCCTAGTCACCCTACTTAAAT........................................................................................ 26 0 1 15.00 15 14 1 0 0
...............................GTTCCACCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 29 0 1 13.00 13 13 0 0 0
..................................CCACCGATAGTAAGCTTT............................................................................................................................... 18 0 1 7.00 7 2 5 0 0
...............................GTTCCACCGATAGTAAGCTTTAAAGT.......................................................................................................................... 26 0 1 7.00 7 7 0 0 0
............................................................AGCGCGTAGCTCCTAGTCACCCTACTT............................................................................................ 27 0 1 6.00 6 6 0 0 0
.............................................................GCGCGTAGCTCCTAGTCACCCTACTT............................................................................................ 26 0 1 6.00 6 6 0 0 0
..................................CCACCGATAGTAAGCTTTAAAGTAAT....................................................................................................................... 26 1 1 6.00 6 0 6 0 0
.................................................................GTAGCTCCTAGTCACCCTACTT............................................................................................ 22 0 1 6.00 6 5 1 0 0
..................................CCACCGATAGTAAGCTTTA.............................................................................................................................. 19 0 1 5.00 5 0 5 0 0
..................................CCACCGATAGTAAGCTTTAAAGACAT....................................................................................................................... 26 1 1 5.00 5 0 5 0 0
......................................CGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 22 0 1 4.00 4 1 3 0 0
.......................................................................CCTAGTCACCCTACTTAAATTTAACGT................................................................................. 27 0 1 4.00 4 3 1 0 0
................................TTCCACCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 28 0 1 4.00 4 4 0 0 0
..............................................................CGCGTAGCTCCTAGTCACCCTACTT............................................................................................ 25 0 1 4.00 4 3 1 0 0
....................................ACCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 24 0 1 3.00 3 3 0 0 0
.................................TCCACCGATAGTAAGCTTTAAAGTCA........................................................................................................................ 26 0 1 3.00 3 2 1 0 0
..................................................................................................GAAACGGAAACAGCGCTGTTTTCTT........................................................ 25 0 1 3.00 3 3 0 0 0
..................................................................................................GAAACGGAAACAGCGCTGTTTTCTTT....................................................... 26 0 1 3.00 3 3 0 0 0
.....................................................................................................................................TACGATTTTAAAACGTAAGTAAAAT..................... 25 0 1 3.00 3 3 0 0 0
.................................CCCACCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 27 1 1 3.00 3 0 3 0 0
...................................CACCGATAGTAAGCTTTAAAGTCA........................................................................................................................ 24 0 1 3.00 3 2 1 0 0
..................................CCACCCATAGTAAGCTTTAAAGTCAT....................................................................................................................... 26 1 1 3.00 3 0 3 0 0
..................................CCACCGATAGTAAGCTTTAAAG........................................................................................................................... 22 0 1 3.00 3 1 2 0 0
..................................CCACCGATAGTAAGCTTTAAAGCCAT....................................................................................................................... 26 1 1 3.00 3 1 2 0 0
..................................CCACCGATAGTAAGGTTTAAAGTCAT....................................................................................................................... 26 1 1 3.00 3 3 0 0 0
.............................................................................CACCCTACTTAAATTTAACGTGAAACG........................................................................... 27 0 1 2.00 2 1 1 0 0
..................................CCACCGATAGTAAGATTTAAAGTCAT....................................................................................................................... 26 1 1 2.00 2 0 2 0 0
.....................................CCGATAGTAAGCTTTAAAGTCA........................................................................................................................ 22 0 1 2.00 2 2 0 0 0
..................................CCACCGATAGTAAGCTTTAAAGGCAT....................................................................................................................... 26 1 1 2.00 2 0 2 0 0
...........................................................................................................ACAGCGCTGTTTTCTTTTCACAGC................................................ 24 0 1 2.00 2 2 0 0 0
.........................CGCTGTGTTCCACCGATAGTAAGCTT................................................................................................................................ 26 0 1 2.00 2 2 0 0 0
..................................CCACCGATAGTAAGCTTTCAAGTCAT....................................................................................................................... 26 1 1 2.00 2 0 2 0 0
...GGGAACTTTTAAGGTTTTGAGTCGCTGT.................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0
..................................CCACCGATAGTAAGCTTTAAAGT.......................................................................................................................... 23 0 1 2.00 2 0 2 0 0
....................................................................GCTCCTAGTCACCCTACTTAAAT........................................................................................ 23 0 1 2.00 2 2 0 0 0
................................................................CGTAGCTCCTAGTCACCCTACTT............................................................................................ 23 0 1 2.00 2 1 1 0 0
...................................................................AGCTCCTAGTCACCCTACTTAAATTT...................................................................................... 26 0 1 2.00 2 2 0 0 0
..................................CCACCGATAGTAAGCTTTAAAGTC......................................................................................................................... 24 0 1 2.00 2 1 1 0 0
................................................CTTTAAAGTCATAGCGCGTAGCTCCT......................................................................................................... 26 0 1 2.00 2 2 0 0 0
........................................ATAGTAAGCTTTAAAGTCAT....................................................................................................................... 20 0 1 2.00 2 1 1 0 0
....................................................................................................................................TTACGATTTTAAAACGTAAGTAAAA...................... 25 0 1 2.00 2 1 1 0 0
..................................CCACCGATAGTAAGCTTTAAAATCAT....................................................................................................................... 26 1 1 2.00 2 0 2 0 0
..................................CCACCGAAAGTAAGCTTTAAAGTCAT....................................................................................................................... 26 1 1 2.00 2 1 1 0 0
.................................TCCACCGATAGTAAGCTTTAC............................................................................................................................. 21 1 1 1.00 1 0 1 0 0
............................TGTGTTCCACCGATAGTAAGCTT................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
..................................................................................................................TGTTTTCTTTTCACAGCGTTACGATTGT..................................... 28 1 1 1.00 1 0 1 0 0
.......................................GATAGTAAGCTTTAAAGTCAT....................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.............................................................................................................................................TAAAACGTAAGTAAAATACTCCTATCGT.......... 28 0 1 1.00 1 1 0 0 0
..TGGGAACTTTTAAGGTTTTGAGT.......................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0
.GTGGGAACTTTTAAGGTTTTGAG........................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...................................................................................................................................GTTACGATTTTAAAACGTAAGTAAAAT..................... 27 0 1 1.00 1 1 0 0 0
...................................CACCGATAGTAAGCTTTAA............................................................................................................................. 19 0 1 1.00 1 0 1 0 0
........................................................................................................................................GATTTTAAAACGTAAGTAAAATACTCCT............... 28 0 1 1.00 1 1 0 0 0
........CTTTTAAGGTTTTGAGTCGCTGTGCT................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0
..................................CCACCGATAGTAAGCTTTAAAGTCTT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
..................................CCACCGATAGTAAGCTTGA.............................................................................................................................. 19 1 1 1.00 1 0 1 0 0
................................................................CATAGCTCCTAGTCACCCTACTT............................................................................................ 23 1 1 1.00 1 1 0 0 0
...GGGAACTTTTAAGGTTTTGAGTCGCT...................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0
..................................CCACCAATAGTAAGCTTTAAAGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
...................CTGAGTCGCTGTGTTCCACCGATATT...................................................................................................................................... 26 2 1 1.00 1 0 1 0 0
...........................CTGTGTTCCACCGATAGTAGGCTTT............................................................................................................................... 25 1 1 1.00 1 0 1 0 0
...................................CACCGATAGTAAGCTTTAAAGTCAC....................................................................................................................... 25 1 1 1.00 1 0 1 0 0
..............................................................CGCGTAGCTCCTAGTCACCCTACGT............................................................................................ 25 1 1 1.00 1 0 1 0 0
.........................................................CATAGCGCGTAGCTCCTAGTCACCCT................................................................................................ 26 0 1 1.00 1 1 0 0 0
...............................................................................................................................CAGCGTTACGATTTTAAAACGTAAGT.......................... 26 0 1 1.00 1 1 0 0 0
...............................................................GCGTAGCTCCTAGTCACCCTACTTAAAT........................................................................................ 28 0 1 1.00 1 1 0 0 0
................................TTCCACCGATAGTAAGCTT................................................................................................................................ 19 0 1 1.00 1 0 1 0 0
..................................CCACCTATAGTAAGCTTTAAAGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
......................................................................TCCTAGTCACCCTACTTAAAT........................................................................................ 21 0 1 1.00 1 0 0 1 0
...............................................................GTGTAGCTCCTAGTCACCCTACTTAAAT........................................................................................ 28 1 1 1.00 1 1 0 0 0
.............................GTGTTCCACCGATAGTAAGCTTTAAAG........................................................................................................................... 27 0 1 1.00 1 1 0 0 0
....GGAACTTTTAAGGTTTTGAGTCGCT...................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.....................................................................................................................................TACGATTTTAAAACGTAAGTAAAATA.................... 26 0 1 1.00 1 1 0 0 0
..................................................................TAGCTCCTAGTCACCCTACTT............................................................................................ 21 0 1 1.00 1 1 0 0 0
.................................TCCACCGATAGTAAGCTTG............................................................................................................................... 19 1 1 1.00 1 0 1 0 0
...........................................................................................................................TTCACAGCGTTACGATTTTAAAACGT.............................. 26 0 1 1.00 1 1 0 0 0
..................................CCACCGATAGTAAGCCTTAAAGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
.................................................................GTAGCTCCTAGTCACCCTACTTAAATTT...................................................................................... 28 0 1 1.00 1 1 0 0 0
..................................CCACCCATAGTAAGCTTTAAAGT.......................................................................................................................... 23 1 1 1.00 1 0 1 0 0
....................................ACCGATAGTAAGCTTTAAAGTCA........................................................................................................................ 23 0 1 1.00 1 1 0 0 0
..................................CCACCGATAGTAAGCTTTACAG........................................................................................................................... 22 1 1 1.00 1 0 1 0 0
.............................................................GCGCGTAGCTCCTAGTCACCCTACTTAA.......................................................................................... 28 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................AAGTAAAATACTCCTATCGTTTTTAT.... 26 0 1 1.00 1 1 0 0 0
...............................................................................................CGTGAAACGGAAACAGCGCTGTTTTCT......................................................... 27 0 1 1.00 1 0 0 0 1
...................................CACCGATAATAAGCTTTAAAGTCAT....................................................................................................................... 25 1 1 1.00 1 0 1 0 0
..................................CCAACGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
...................................................................AGCTCCTAGTCACCCTACTTAAAT........................................................................................ 24 0 1 1.00 1 1 0 0 0
.....................................CCGATAGTAAGCTTTAAAGTCATTAA.................................................................................................................... 26 3 1 1.00 1 1 0 0 0
..................................................................................................GAAACGGAAACAGCGCTGTTTTCTTTT...................................................... 27 0 1 1.00 1 0 1 0 0
.........................................................................................................AAACAGCGCTGTTTTCTTTTCACAGC................................................ 26 0 1 1.00 1 1 0 0 0
.................................................................................................TGAAACGGAAACAGCGCTGTTTTCT......................................................... 25 0 1 1.00 1 1 0 0 0
.................................TCCACCGATAGTAAGCTTTAAAATCAT....................................................................................................................... 27 1 1 1.00 1 1 0 0 0
......................................................................................................................TTCTTTTCACAGCGTTACGAT........................................ 21 0 1 1.00 1 0 1 0 0
..................................................................TAGCTCCTAGTCACCCTACTTAAAT........................................................................................ 25 0 1 1.00 1 0 1 0 0
...............................................................ACGTAGCTCCTAGTCACCCTACTTAAAT........................................................................................ 28 1 1 1.00 1 1 0 0 0
........CTTTTAAGGTTTTGAGTCGCTGTGT.................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
..................................CCATCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
........................................................TCATAGCGCGTAGCTCCTAG....................................................................................................... 20 0 1 1.00 1 1 0 0 0
................................................................CGTAGCTCCTAGTCACCCTACTTAAATT....................................................................................... 28 0 1 1.00 1 1 0 0 0
.........................CGCTGTGTTCCACCGATAGTAAACTTT............................................................................................................................... 27 1 1 1.00 1 0 1 0 0
...................................................................AGCTCCTAGTCACCCTACTT............................................................................................ 20 0 1 1.00 1 1 0 0 0
..................................CGACCGATAGTAAGCTTTAAAGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
........CTTTTAAGGTTTTGAGTC......................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
...........................................................................GTCACCCTACTTAAATTTAACG.................................................................................. 22 0 1 1.00 1 1 0 0 0
.............................................................................CACCCTACTTAAATTTAACGTGAAAC............................................................................ 26 0 1 1.00 1 1 0 0 0
..................................CCACCGATAATAAGCTTT............................................................................................................................... 18 1 1 1.00 1 0 1 0 0
.......................................................................................................................................CGATTTTAAAACGTAAGTAAAAT..................... 23 0 1 1.00 1 1 0 0 0
.................................TCCACCGATAGTAAGCTTTAAAGTTAT....................................................................................................................... 27 1 1 1.00 1 0 1 0 0
..................................CCACCGATAGTAAGCTTTAATGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
..................................CCACCGATAGTAAGCTTTAAAGTCAGC...................................................................................................................... 27 2 1 1.00 1 0 1 0 0
..................................CCACCGATAGTAAGCTTTAAAGTCAG....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
...................................CATCGATAGTAAGCTTTA.............................................................................................................................. 18 1 1 1.00 1 0 1 0 0
...........................................................................................................................................TTTAAAACGTAAGTAAAATACTCCT............... 25 0 1 1.00 1 1 0 0 0
.........................CGCTGTGTTCCACCGATAGTAAGCT................................................................................................................................. 25 0 1 1.00 1 0 1 0 0
...........................................................................................TTAACGTGAAACGGAAACAGCGCTGT.............................................................. 26 0 1 1.00 1 1 0 0 0
.................................................................................................................CTGTTTTCTTTTCACAGCGTTACGAT........................................ 26 0 1 1.00 1 1 0 0 0
...................................CACCGATAGTAAGCTTTAAAGTCATC...................................................................................................................... 26 1 1 1.00 1 0 1 0 0
.....................................................................................................................TTTCTTTTCACAGCGTTACGATTTT..................................... 25 0 1 1.00 1 1 0 0 0
..................................CCACCGATAGTAAGCTTTAAAGTTAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
..................................CCACCGATAGTAAGCTTTAAAATCATCT..................................................................................................................... 28 3 1 1.00 1 0 1 0 0
..................................CCACCGATAGTAAGCTTTTAAGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
................................TTCCGCCGATAGTAAGCTTTAAAGTCA........................................................................................................................ 27 1 1 1.00 1 1 0 0 0
.......................................................................CCTAGTCACCCTACTTAAATTTAACGTG................................................................................ 28 0 1 1.00 1 1 0 0 0
...................................CACCGATAGTAAGCTTTAAAGTAAT....................................................................................................................... 25 1 1 1.00 1 0 1 0 0
.......................................................................CCTAGTCACCCTACTTAAATT....................................................................................... 21 0 1 1.00 1 0 1 0 0
.....GAACTTTTAAGGTTTTGAGTCGCT...................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
...............................GTTCCACCGATAGTAAGCTTTAAAG........................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.........................................................................................................................................CCTTTAAAACGTAAGTAAAATACTCCT............... 27 2 1 1.00 1 1 0 0 0
............................................................................................................................TCACAGCGTTACGATTTTAAAACGTAAGT.......................... 29 0 1 1.00 1 0 1 0 0
..................................................................................................CAAACGGAAACAGCGCTGTTTTCTTTT...................................................... 27 1 1 1.00 1 1 0 0 0
....................................................................................................................................TTACGATTTTAAAACGTAAGTAAAAT..................... 26 0 1 1.00 1 1 0 0 0
.........................CGCTGTGTTCCACCGATAGAAAGCTTT............................................................................................................................... 27 1 1 1.00 1 0 1 0 0
...........................CTGTGTTCCACCGATAGTAAGCTTTA.............................................................................................................................. 26 0 1 1.00 1 0 1 0 0
.........................CGCTGTGTTCCACCGATAGTAAGCGT................................................................................................................................ 26 1 1 1.00 1 0 1 0 0
.......ACTTTTAAGGTTTTGAGTCGCTGTGTT................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0
..................................CCACCGATAGAAAGCTTTAAAGTCAT....................................................................................................................... 26 1 1 1.00 1 0 1 0 0
................................................................CGTAGCTCCTAGTCACCCTACT............................................................................................. 22 0 1 1.00 1 1 0 0 0
...........................................................................................TTAACGTGAAACGGAAACAGCGCTGTTT............................................................ 28 0 1 1.00 1 1 0 0 0
...................................CACCGATAGTAAGCTTTA.............................................................................................................................. 18 0 1 1.00 1 0 1 0 0
...............................GTTCCACCGATAGTAAGCTTTAAAGTCA........................................................................................................................ 28 0 1 1.00 1 1 0 0 0
..........TTTAAGGTTTTGAGTCGCTGTGTT................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
CGTGGGGAACTTTAAGGTTT............................................................................................................................................................... 20 3 10 0.20 2 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6686:2799-2977 + dmo_276 GCACCCTTGAAAATTCCAAAACTCAGCGACACAAGGTGGCTATCATTCGAAATTTCAGTATCGCGCATCGAGGATCAGTGGGATGAATTTAAAT---TGCACTTTGCCTTTGTCGCGACAAAAGAAAAGTGTCGCAAT-GCTAAAATTTTGCATTCATTTTATGAG---GATAGCAAAAATAGGCT------------
droVir3 scaffold_13049:5888681-5888781 - AGT------------------------------------------------------GTGGCCCATTACGAGGGTCTGTGGAAGAGGCCAAAAT-----------------GCCGCTGCCTGCGAAATGTGCCGCATAAGCCCATT----AGATGCGT-AGCAAAAACCGACAACAG---------------------
droGri2 scaffold_15110:24354194-24354277 - TAAACTTCACTTTTGACCCTTTATCGTAACGTAAGA--------------------------------------------------------------------------------------------GTT------------TTTTTTTAC-------AAATATC---GACTGAAACAGTTATTTCTAAAATGTGGA
droWil2 scf2_1100000004909:30108-30286 + GAACCCTTAAAAATTCCAAGAGTTTCTGATACAAGGTGGCTTTCCCTTGGAACTGCAGTTTCGAGGATCGAGGAACAGTGGGACGCACTCAAGT---TGCACTTTGACTTAGCCGCGACAGACGAAAGCTGTCACAAA-GCACATATTTTGCGTGCATTGTATGAG---GAAGACAAAAATAAGGT------------
dp5 XL_group1a:1748045-1748222 + ----CCGTAAAAATTCCAAAAGTAAGCGATACGCGATGGCCATCTATTGAAGCTGCTGTATGCAGAATCGAGGAGCAGTGGGATGAGCTTAAGGTAGTGCACCTCGCCCTAGCTGCAACCGTCGAAAGATGCCACAAG-GCAACAATTTTAAATGAACTATTTTCT---GACGAAAAAAATAAGCT------------
droPer2 scaffold_28:104462-104639 - ----CCGTAAAAATTCCAAAAGTAAGCGATACGCGATGGCTATCTATTGAAACTGCTGTATGCAGAATCGAGGAGCAGTGGGATGAGCTTAAGGTAGTGCACCTCGCCCTAGCTGCAACCGTCGAAAGATGCCACAAG-GCAAAAATTTTAAATGAACTATTTTCT---GACGAAAAAAATAAGCT------------
droAna3 scaffold_13337:10299412-10299590 + TTGCCCTTGAAAATCCCTAGAGTCTGCGAGACTAGATGGCTTTCAATTGAGCTGGCGGTGTCCAGGATTGTTGATCAGTGGGCTGAGCTAAAAT---TGCATTTTTCCATAGCTTCACTCCAGGAGAACTGTCACAAA-GCCAAAATCTTGCACGAACTGTACAGT---GACGAAGTAAATTGCCT------------
droBip1 scf7180000395049:5133-5311 + GCACCCTTAAAAATTCCCAAGGTTAGCGACACTAGATGGCTATCCATCGAAAGTGCAGTATCTCGAATCGAGAGTCAGTGGGAGGAATTAAAGT---TACACTTTGCCTTAGCCTCTACAAATGAAAGTTGTCGCAAA-GCAAAAATTTTGAATATGCTGTTTGAA---GATGACAAAAATAGGCT------------
droKik1 scf7180000299012:420-598 + GTTCCTTTGAAAATACCCAGAGTCAGCGACACAAGATGGTTGTCGATAGAATTGGCAGTATCGAGAATATTGGATCAGTGGGAAGAGCTGAAAA---TTCACTTTGGCTTAGCTGCAACTAACGAAAAATGCTTAAAA-GCGCAAATGCTGCACCAGCAATTCAGC---GATGACGTTAATTATCT------------
droFic1 scf7180000454174:5392-5566 + GCACCCTTAAAAATTCTCAAGGTCAGCGACACTAGATGGCTATCCATCAAAAGTGCAGTATCTCGAATCGAGGATCAGTGGGAGGAATTAAAGT---TACACTTTGCCTTAGCCTCTACAAATGAAAGTTGTCACAAA-GCAAAAATATTGAATATGCTATATGAA---GATGACAAAAATA----------------
droEle1 scf7180000488598:1606-1784 - GCACCCTTAAAAATTCTCAAGGTCAGCGACACTAGATGGCTATCCATCGAAAGTGCAGTATCTCGAATCGAGGATCAGTGGGAGGAATTAAAGT---TACACTTTGCCTTAGCCTCTACAAATGAAAGTTGTCACAAA-GCAAAAATATTGAATATGCTATCTGAA---GATGACAAAAATAGGCT------------
droRho1 scf7180000778875:3690-3873 + GCTCCATTGAAAATAACAAAAGTGAGCGACACCAGGTGGCTTTCGATTGAGGTTGCTGTCTCGCGAATATTAGATCAATGGGAAGAGCTCAAAT---TGCATTTTGAATTGGCCGCAACAAAAGAAAAATGCCTTAAA-TCAAAAATTCTTTGCGGATTATATAGT---GACAAAATAAATCATTTATAGT-------
droBia1 scf7180000302239:30063-30241 - ACTCCATTAAAAATACCCAAAGTTTCCGATACCAGATGACTATCAATAGAACCTGCCGTAACTAGGATTTCACATCAGTGGTCGGAGCTCAAAT---TGCACTTTGCCTTAGCTGCCAGTTCAGAAAAATGCCACAAG-GACAAAATTTTGCATGATTTATATAAC---GATGAAACTAATTTGTT------------
droTak1 scf7180000415770:8837-9010 - GCTCCACTAAAAATCCCTAGAGTCTGTGATACTAGGTGGCTATCAATTGAGTGTGCAGTTAAGAGAATTCTACAACAATGGAATGAGTTAAAAA---CACATTTTAACCATGCTGCTTTGAATGAAAATTGTCATAAG-GCCGAAATTTTACGAGATTTATACAAC---GACGAGGAAAAT-----------------
droEug1 scf7180000409595:23635-23813 + GTTCCTTTGAAAATACCCAGAGTCAGTGACACAAGATGGTTGTCAATTAAATTGGCAGTATCCAGAATTTTGGATCAGTGGGAAGAGCTGAAGT---TGCACTTCGGCTTGGCAGCAACTAATGAAAAATGCTTCAAA-GCACAAATGGTGCACCAGCAATTCAAC---GACAACGTGAATTATTT------------
droYak3 v2_chrUn_3420:11587-11762 - GCTCCGCTTAAAATAATCAGAGTCGCTGACACCAGGTGGCTTTCCATTGAAAATGCATTCAAACGTATCACAGCGCAATGGATAGAGCTAAAGC---TACATTTTCAAACTGCAGCGCTGGAGGAAAAGTGCCACAAA-GCGAAGATATTGAGCAGTCTATAC------GACAAAAAAAATTATTT------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCACCCTTGAAAATTCCAAAACTCAGCGACACAAGGTGGCTATCATTCGAAATTTCAGTATCGCGCATCGAGGATCAGTGGGATGAATTTAAAT---TGCACTTTGCCTTTGTCGCGACAAAAGAAAAGTGTCGCAAT-GCTAAAATTTTGCATTCATTTTATGAG---GATAGCAAAAATAGGCT------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................AATTTCAGTATCGCGCATCGAGG.............................................................................................................................23124.00242010021
..................................................AATTTCAGTATCGCGCATCGAGGA............................................................................................................................24111.00111000010
..................................................AATTTCAGTATCGCGCATCGAGGATC..........................................................................................................................2617.007400030
..................................................AATTTCAGTATCGCGCATCGAGGAT...........................................................................................................................2516.006500010
........GAAAATTCCAAAACTCAGCGACAC......................................................................................................................................................................2415.005400010
..................................................AATTTCAGTATCGCGCATCGA...............................................................................................................................2114.004400000
........GAAAATTCCAAAACTCAGCGACACAAG...................................................................................................................................................................2714.004210010
........GAAAATTCCAAAACTCAGCGACACA.....................................................................................................................................................................2514.004300010
.................................................................................GATGAATTTAAAT---TGCACTTTGCC..........................................................................................2413.003100020
........GAAAATTCCAAAACTCAGCGACA.......................................................................................................................................................................2313.003300000
.................................................................................GATGAATTTAAAT---TGCACTTTGCCT.........................................................................................2512.002100010
........GAAAATTCCAAAACTCAGCGACACAA....................................................................................................................................................................2612.002200000
........................................................................................TTAAAT---TGCACTTTGCCTTTGTCGCGACA..............................................................................2912.002200000
........GAAAATTCCAAAACTCAGCGACACAAGG..................................................................................................................................................................2812.002200000
...................................................ATTTCAGTATCGCGCATCGAGGA............................................................................................................................2312.002200000
...................................................ATTTCAGTATCGCGCATCGAGG.............................................................................................................................2211.001100000
.................................................................................GATGAATTTAAAT---TGCACTTTGCCTT........................................................................................2611.001100000
..................................................................................................................................................................TGAG---GATAGCAAAAATAGGCT------------2111.001100000
............................................................................................................TTTGTCGCGACAAAAGAAAAGTG...................................................................2311.001100000
.........AAAATTCCAAAACTCAGCGACACAAGG..................................................................................................................................................................2711.001100000
........................................................................................................................................................ATTCATTTTATGAG---GATAGCAAAAATA................2711.001100000
............................................................................................AT---TGCACTTTGCCTTTGTCGCGACAAA............................................................................2711.001100000
.............................................................................GTGGGATGAATTTAAAT---TGCACTTTGCC..........................................................................................2811.001100000
..................................................AATTTCAGTATCGCGCATCGAGC.............................................................................................................................2311.001100000
..................................................AATTTCAGTATCGCGCATC.................................................................................................................................1911.001000010
...........................................................................................................................................................CATTTTATGAG---GATAGCAAAA...................2111.001100000
................................................................................................................................................................TATGAG---GATAGCAAAAATAGGCT------------2311.001100000
........................................................................................................................................................ATTCATTTTATGAG---GATAGC.......................2011.001100000
.............................................................................GTGGGATGAATTTAAAT---TGCACTTTGC...........................................................................................2711.001100000
..................................................AATTTCAGTATCGCGCATCGAG..............................................................................................................................2211.001100000
..........................................TCATTCGAAATTTCAGTATCGCG.....................................................................................................................................2311.001100000
...............................................................................GGGATGAATTTAAAT---TGCACTTTGCC..........................................................................................2611.001100000
..................................................AATTTCAGTATCGCGCATCGAGGAC...........................................................................................................................2511.001000010
..................................................AATTTCAGTATCGCGCATCGAGGATCA.........................................................................................................................2711.001100000
..............TCCAAAACTCAGCGACACAAGGTGG...............................................................................................................................................................2511.001100000
...........AATTCCAAAACTCAGCGACACAAGGTTC...............................................................................................................................................................2811.001000010
...................................................ATTTCAGTATCGCGCATCGAGGAA...........................................................................................................................2411.001100000
.................................................................................................TGCACTTTGCCTTTGTCGCGACA..............................................................................2311.001100000
.........AAAATTCCAAAACTCAGCGACACA.....................................................................................................................................................................2411.001100000
......................................................TCAGTATCGCGCATCGAGGATCA.........................................................................................................................2311.001100000
.................................................................................GATGAATTTAAAT---TGCACTTTGCCTTTG......................................................................................2811.001100000
droVir3
AGT------------------------------------------------------GTGGCCCATTACGAGGGTCTGTGGAAGAGGCCAAAAT-----------------GCCGCTGCCTGCGAAATGTGCCGCATAAGCCCATT----AGATGCGT-AGCAAAAACCGACAACAG---------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
TAAACTTCACTTTTGACCCTTTATCGTAACGTAAGA--------------------------------------------------------------------------------------------GTT------------TTTTTTTAC-------AAATATC---GACTGAAACAGTTATTTCTAAAATGTGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GAACCCTTAAAAATTCCAAGAGTTTCTGATACAAGGTGGCTTTCCCTTGGAACTGCAGTTTCGAGGATCGAGGAACAGTGGGACGCACTCAAGT---TGCACTTTGACTTAGCCGCGACAGACGAAAGCTGTCACAAA-GCACATATTTTGCGTGCATTGTATGAG---GAAGACAAAAATAAGGT------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................TGCACTTTGACTTAGCCGCGACAGA............................................................................2520.50101000
..............................................................................TGGGACGCACTCAAGT---TGCACTTTGACC.........................................................................................2820.50101000
........................................................................................TCAAGT---TGCACTTTGACTTAGCCGC..................................................................................2530.33101000
dp5
----CCGTAAAAATTCCAAAAGTAAGCGATACGCGATGGCCATCTATTGAAGCTGCTGTATGCAGAATCGAGGAGCAGTGGGATGAGCTTAAGGTAGTGCACCTCGCCCTAGCTGCAACCGTCGAAAGATGCCACAAG-GCAACAATTTTAAATGAACTATTTTCT---GACGAAAAAAATAAGCT------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................CATCTATTGAAGCTGCTGTATGC.......................................................................................................................................23115.001501220000100
..........................................................TATGCAGAATCGAGGAGCAGTGGG....................................................................................................................24110.00100200000800
............................................................TGCAGAATCGAGGAGCAGTGG.....................................................................................................................21110.00100300001600
.............................TACGCGATGGCCATCTATTGAAGC.................................................................................................................................................2419.0090710000100
..........................................................TATGCAGAATCGAGGAGCAGTGGGA...................................................................................................................2519.0090500000400
......................................................................................................................................................AAATGAACTATTTTCT---GACGAAA......................2318.0080800000000
.....................................................................................................................ACCGTCGAAAGATGCCACAAG-GC.........................................................2316.0060600000000
............................................................TGCAGAATCGAGGAGCAGTGGGA...................................................................................................................2316.0060500000100
......................................................................................................................................................AAATGAACTATTTTCT---GACGAAAA.....................2416.0060400000200
.....................................................................................................................ACCGTCGAAAGATGCCACAAG-G..........................................................2215.0050500000000
..........................................................TATGCAGAATCGAGGAGCAGTGG.....................................................................................................................2314.0040300000100
.......................................CCATCTATTGAAGCTGCTGTATG........................................................................................................................................2314.0040200000200
.......................................................................................................................................................AATGAACTATTTTCT---GACGAAAAA....................2413.0030200000100
......................................................................................................................................................AAATGAACTATTTTCT---GACGAAAAAAAA.................2813.0030000000300
..............................................................................TGGGATGAGCTTAAGGTAGTGCACC...............................................................................................2513.0030000000300
.......................................................................................................................................................AATGAACTATTTTCT---GACGAAAA.....................2313.0030200000100
............................................................TGCAGAATCGAGGAGCAGTGGG....................................................................................................................2213.0030000000300
......................................................................................................................................................AAATGAACTATTTTCT---GACGA........................2113.0030300000000
.......................................................................................................................................................AATGAACTATTTTCT---GACGAAAAAA...................2512.0020200000000
.....................................................TGCTGTATGCAGAATCGAGGA............................................................................................................................2112.0020200000000
......................................................................................................................................................AAATGAACTATTTTCT---GACGAAAAA....................2512.0020200000000
..................................................................................ATGAGCTTAAGGTAGTGCACCTCGCCC.........................................................................................2712.0020000000200
...................................................................................................................CAACCGTCGAAAGATGCCACAAG-G..........................................................2412.0020200000000
........................................CATCTATTGAAGCTGCTGTATGCAGAA...................................................................................................................................2712.0020100001000
.......................................CCATCTATTGAAGCTGCTGTATGC.......................................................................................................................................2412.0020100100000
........................................CATCTATTGAAGCTGCTGTATG........................................................................................................................................2212.0020200000000
....................................................................................................................AACCGTCGAAAGATGCCACAAG-...........................................................2212.0020200000000
........................................CATCTATTGAAGCTGCTGTAT.........................................................................................................................................2111.0010100000000
..............................................................CAGAATCGAGGAGCAGTGGGATGAGCT.............................................................................................................2711.0010100000000
....................................................................................................................AACCGTCGAAAGATGCCACAAG-GC.........................................................2411.0010100000000
......................................................................................................................................................AAATGAACTATTTTCT---GACGAA.......................2211.0010100000000
.............................TACGCGATGGCCATCTATTGAAG..................................................................................................................................................2311.0010100000000
......................................................................................................................................................AAATGAACTATTTTCT---GACGAAAAAA...................2611.0010000000100
.......................................................................................................TCGCCCTAGCTGCAACCGTC...........................................................................2011.0010100000000
....................................................................................................................AACCGTCGAAAGATGCCACAAG-G..........................................................2311.0010100000000
......................................................................................................................CCGTCGAAAGATGCCACAAG-GC.........................................................2211.0010100000000
.................................................................................................TGCACCTCGCCCTAGCTGCAACCGTCGA.........................................................................2811.0010100000000
............ATTCCAAAAGTAAGCGATACGCGA..................................................................................................................................................................2411.0010100000000
..............................................................................................TAGTGCACCTCGCCCTAGC.....................................................................................1911.0010100000000
...........AATTCCAAAAGTAAGCGATACGCGA..................................................................................................................................................................2511.0010100000000
............................................TATTGAAGCTGCTGTATGCAA.....................................................................................................................................2111.0010100000000
...................................................................................................................CAACCGTCGAAAGATGCCACAAG-GCAAC......................................................2811.0010010000000
...................................................................................................................CAACCGTCGAAAGATGCCACAAG-GCA........................................................2611.0010100000000
.......................................................................................................................................................AATGAACTATTTTCT---GACGAAAAAAA..................2611.0010100000000
....................................TGGCCATCTATTGAAGCTGCTG............................................................................................................................................2211.0010100000000
...................................................................................TGAGCTTAAGGTAGTGCACCTCG............................................................................................2311.0010100000000
....................................................................................................................AACCGTCGAAAGATGCCACAAG-GA.........................................................2411.0010100000000
.....................................................................................................................ACCGTCGAAAGATGCCACAAG-GCAAA......................................................2611.0010010000000
.............................................................................GTGGGATGAGCTTAAGGTAGTGCACCT..............................................................................................2711.0010000001000
............................................TATTGAAGCTGCTGTATGCA......................................................................................................................................2011.0010100000000
.........................................................................AGCAGTGGGATGAGCTTAAGGTAG.....................................................................................................2411.0010100000000
.............................................................GCAGAATCGAGGAGCAGTGG.....................................................................................................................2011.0010000000100
..............................................................................TGGGATGAGCTTAAGGTAGTGCACCT..............................................................................................2611.0010100000000
............................................................TGCAGAATCGAGGAGCAGTGGGATGA................................................................................................................2611.0010100000000
..........................................................TATGCAGAATCGAGGAGCAGTGGGAA..................................................................................................................2611.0010100000000
...................................................................................................................CAACCGTCGAAAGATGCCACAA.............................................................2211.0010100000000
.....................................................................................................................ACCGTCGAAAGATGCCACAAG-GCA........................................................2411.0010100000000
.........................................ATCTATTGAAGCTGCTGTATGC.......................................................................................................................................2211.0010100000000
..........AAATTCCAAAAGTAAGCGATACGCGA..................................................................................................................................................................2611.0010100000000
..................AAAGTAAGCGATACGCGATGG...............................................................................................................................................................2111.0010100000000
....................................TGGCCATCTATTGAAGCTG...............................................................................................................................................1911.0010100000000
.......................................................................................................................CGTCGAAAGATGCCACAAG-GCA........................................................2211.0010100000000
..................................................................ATCGAGGAGCAGTGGGATGAA...............................................................................................................2111.0010100000000
.............................TACGCGATGGCCATCTATTGAAGCTGC..............................................................................................................................................2711.0010100000000
...................................................................................TGAGCTTAAGGTAGTGCACCTCGCCC.........................................................................................2611.0010100000000
.......................................................................................................................................................AATGAACTATTTTCT---GACG.........................1911.0010100000000
...................................................................................................................CAACCGTCGAAAGATGCCACAAG-GC.........................................................2511.0010001000000
......................................................................................................................................................AAATGAACTATTTTCT---GACGAAAAAAA..................2711.0010000000100
.....................................................................................................................................................TAAATGAACTATTTTCT---GACGAAA......................2411.0010000000100
...............................................................AGAATCGAGGAGCAGTGGGAT..................................................................................................................2111.0010100000000
..............TCCAAAAGTAAGCGATACGCGATGG...............................................................................................................................................................2511.0010100000000
.......................................................................................................................................................AATGAACTATTTTCT---GACGA........................2011.0010100000000
..............................................................................TGGGATGAGCTTAAGGTAGG....................................................................................................2011.0010100000000
...................................................................................TGAGCTTAAGGTAGTGCACCTCGCC..........................................................................................2511.0010100000000
....................................................................................................ACCTCGCCCTAGCTGCAACCGTCGAAA.......................................................................2711.0010000000100
....CCGTAAAAATTCCAAAAGTAAGC...........................................................................................................................................................................2311.0010100000000
.......................................................................................................................CGTCGAAAGATGCCACAAG-GCAACA.....................................................2511.0010100000000
...................................................................................................................CAACCGTCGAAAGATGCCACAAG-GCAA.......................................................2711.0010100000000
.......................................................................................................................................................AATGAACTATTTTCT---GACGAAA......................2211.0010100000000
.................AAAAGTAAGCGATACGCGATG................................................................................................................................................................2111.0010100000000
...................................................................................................................CAACCGTCGAAAGATGCCACAAG-...........................................................2311.0010100000000
..........................................................TATGCAGAATCGAGGAGCAGTGGGT...................................................................................................................2511.0010000000100
.............................TACGCGATGGCCATCTATTGAAGCT................................................................................................................................................2511.0010010000000
......................................................................................................................................................AAATGAACTATTTTCT---GACG.........................2011.0010100000000
.............................................................GCAGAATCGAGGAGCAGTGGG....................................................................................................................2111.0010100000000
...........................................................................................AGGTAGTGCACCTCGCCCTAGC.....................................................................................2211.0010100000000
....................................................................................................................................................TTAAATGAACTATTTTCT---GA...........................2011.0010100000000
...................................................................................................................CAACCGTCGAAAGATGCCACAAG-GCAAA......................................................2811.0010100000000
.........................................ATCTATTGAAGCTGCTGTAT.........................................................................................................................................2011.0010100000000
.............................................................................................................TAGCTGCAACCGTCGAAAGATGCC.................................................................2411.0010100000000
..............................................................................TGGGATGAGCTTAAGGTAAAA...................................................................................................2130.3310100000000
droPer2
----CCGTAAAAATTCCAAAAGTAAGCGATACGCGATGGCTATCTATTGAAACTGCTGTATGCAGAATCGAGGAGCAGTGGGATGAGCTTAAGGTAGTGCACCTCGCCCTAGCTGCAACCGTCGAAAGATGCCACAAG-GCAAAAATTTTAAATGAACTATTTTCT---GACGAAAAAAATAAGCT------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................TATCTATTGAAACTGCTGTATGC.......................................................................................................................................2313.003020001
.................................................................................GATGAGCTTAAGGTAGTGCACCTCG............................................................................................2512.002000002
........................................................TGTATGCAGAATCGAGGAGCAGTGG.....................................................................................................................2511.001010000
.....................................................................................................................ACCGTCGAAAGATGCCACAAG-GC.........................................................2311.001010000
.............................................................................................................TAGCTGCAACCGTCGAAAGATGCCA................................................................2511.001010000
..................................................................ATCGAGGAGCAGTGGGATGA................................................................................................................2011.001001000
.......................................................................................CTTAAGGTAGTGCACCTCGC...........................................................................................2011.001010000
............................................................TGCAGAATCGAGGAGCAGTGGG....................................................................................................................2211.001010000
............................................................TGCAGAATCGAGGAGCAGTGGGA...................................................................................................................2311.001010000
.................................................................................................TGCACCTCGCCCTAGCTGCAACCGTCGA.........................................................................2811.001000001
........................................TATCTATTGAAACTGCTGTATGCA......................................................................................................................................2411.001010000
......GTAAAAATTCCAAAAGTAAGCGA.........................................................................................................................................................................2311.001010000
.........................................................GTATGCAGAATCGAGGAGCAGT.......................................................................................................................2211.001010000
.....................................................................................................................ACCGTCGAAAGATGCCACAAG-...........................................................2111.001010000
..............TCCAAAAGTAAGCGATACGCG...................................................................................................................................................................2111.001010000
.............................................................................................................TAGCTGCAACCGTCGAAAGAT....................................................................2111.001010000
droAna3
TTGCCCTTGAAAATCCCTAGAGTCTGCGAGACTAGATGGCTTTCAATTGAGCTGGCGGTGTCCAGGATTGTTGATCAGTGGGCTGAGCTAAAAT---TGCATTTTTCCATAGCTTCACTCCAGGAGAACTGTCACAAA-GCCAAAATCTTGCACGAACTGTACAGT---GACGAAGTAAATTGCCT------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................GGATTGTTGATCAGTGGGCTGAGC..............................................................................................................2414.004400000
...................................ATGGCTTTCAATTGAGCTGGCGG............................................................................................................................................2313.003200100
................................................................GGATTGTTGATCAGTGGGCTGAG...............................................................................................................2312.002000020
...................................................................................................................CACTCCAGGAGAACTGTCACAAA-GCCA.......................................................2712.002200000
...................................................................TTGTTGATCAGTGGGCTGAG...............................................................................................................2012.002200000
................................................................................................................................CTGTCACAAA-GCCAAAATCTTGCAC............................................2512.002200000
...................................ATGGCTTTCAATTGAGCTGGCGGT...........................................................................................................................................2412.002100010
...................................................................................................................................TCACAAA-GCCAAAATCTTGCACGAAC........................................2611.001100000
............................................................TCCAGGATTGTTGATCAGTGGGCTGAGC..............................................................................................................2811.001010000
...............................................................AGGATTGTTGATCAGTGGGC...................................................................................................................2011.001010000
...............................................................................................................................ACTGTCACAAA-GCCAAAATCTTGCACG...........................................2711.001100000
.......................................................................................................................................AAA-GCCAAAATCTTGCACGAACTGTA....................................2611.001100000
.....................................................................GTTGATCAGTGGGCTGAGCTAAAA.........................................................................................................2411.001000010
............................................................TCCAGGATTGTTGATCAGTGGG....................................................................................................................2211.001100000
......................................................................................................................................................GCACGAACTGTACAGT---GACGAAGTA....................2511.001100000
..................................................................................................................................................................CAGT---GACGAAGTAAATTG...............1811.001000001
....................................................................TGTTGATCAGTGGGCTGAGCTT............................................................................................................2211.001100000
.....................................................................................................TTTTTCCATAGCTTCACTCCAGG..........................................................................2311.001100000
........................................TTTCAATTGAGCTGGCGGTGTC........................................................................................................................................2211.001010000
...................................ATGGCTTTCAATTGAGCTGGCGGTG..........................................................................................................................................2511.001100000
.......................................................................................................................................AAA-GCCAAAATCTTGCACGAACTG......................................2411.001100000
...................................ATGGCTTTCAATTGAGCTGGCGGTGT.........................................................................................................................................2611.001100000
................................................................GGATTGTTGATCAGTGGGCTGA................................................................................................................2211.001100000
..............................................................................................................................AACTGTCACAAA-GCCAAAATCTT................................................2311.001010000
...........................................................................................AAT---TGCATTTTTCCATAGCTTCACTCCA............................................................................2811.001100000
..............................................................................................................................................................TGTACAGT---GACGAAGTAAATTGCCT------------2511.001000010
......................................................................................................................................................GCACGAACTGTACAGT---GACGAAG......................2311.001100000
..........................................................................................................................................................GAACTGTACAGT---GACGAAGTAAATTGCC.............2811.001010000
..........................................TCAATTGAGCTGGCGGTGTCC.......................................................................................................................................2111.001100000
.............................GACTAGATGGCTTTCAATTGAGCTGGC..............................................................................................................................................2711.001100000
............................................................TCCAGGATTGTTGATCAGTGGGCT..................................................................................................................2411.001100000
.................................................................GATTGTTGATCAGTGGGCTGAGC..............................................................................................................2311.001100000
.......................................................................................................................................AAA-GCCAAAATCTTGCACGAACTGTACAG.................................2911.001100000
.....CTTGAAAATCCCTAGAGTCTGCGAG........................................................................................................................................................................2511.001000010
...................................ATGGCTTTCAATTGAGCTGGCG.............................................................................................................................................2211.001100000
.....................................................................GTTGATCAGTGGGCTGAGCTAA...........................................................................................................2211.001100000
droBip1
GCACCCTTAAAAATTCCCAAGGTTAGCGACACTAGATGGCTATCCATCGAAAGTGCAGTATCTCGAATCGAGAGTCAGTGGGAGGAATTAAAGT---TACACTTTGCCTTAGCCTCTACAAATGAAAGTTGTCGCAAA-GCAAAAATTTTGAATATGCTGTTTGAA---GATGACAAAAATAGGCT------------SizeHit CountTotal NormTotal
No Reads
droKik1
GTTCCTTTGAAAATACCCAGAGTCAGCGACACAAGATGGTTGTCGATAGAATTGGCAGTATCGAGAATATTGGATCAGTGGGAAGAGCTGAAAA---TTCACTTTGGCTTAGCTGCAACTAACGAAAAATGCTTAAAA-GCGCAAATGCTGCACCAGCAATTCAGC---GATGACGTTAATTATCT------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCACCCTTAAAAATTCTCAAGGTCAGCGACACTAGATGGCTATCCATCAAAAGTGCAGTATCTCGAATCGAGGATCAGTGGGAGGAATTAAAGT---TACACTTTGCCTTAGCCTCTACAAATGAAAGTTGTCACAAA-GCAAAAATATTGAATATGCTATATGAA---GATGACAAAAATA----------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCACCCTTAAAAATTCTCAAGGTCAGCGACACTAGATGGCTATCCATCGAAAGTGCAGTATCTCGAATCGAGGATCAGTGGGAGGAATTAAAGT---TACACTTTGCCTTAGCCTCTACAAATGAAAGTTGTCACAAA-GCAAAAATATTGAATATGCTATCTGAA---GATGACAAAAATAGGCT------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCTCCATTGAAAATAACAAAAGTGAGCGACACCAGGTGGCTTTCGATTGAGGTTGCTGTCTCGCGAATATTAGATCAATGGGAAGAGCTCAAAT---TGCATTTTGAATTGGCCGCAACAAAAGAAAAATGCCTTAAA-TCAAAAATTCTTTGCGGATTATATAGT---GACAAAATAAATCATTTATAGT-------SizeHit CountTotal NormTotal
No Reads
droBia1
ACTCCATTAAAAATACCCAAAGTTTCCGATACCAGATGACTATCAATAGAACCTGCCGTAACTAGGATTTCACATCAGTGGTCGGAGCTCAAAT---TGCACTTTGCCTTAGCTGCCAGTTCAGAAAAATGCCACAAG-GACAAAATTTTGCATGATTTATATAAC---GATGAAACTAATTTGTT------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCTCCACTAAAAATCCCTAGAGTCTGTGATACTAGGTGGCTATCAATTGAGTGTGCAGTTAAGAGAATTCTACAACAATGGAATGAGTTAAAAA---CACATTTTAACCATGCTGCTTTGAATGAAAATTGTCATAAG-GCCGAAATTTTACGAGATTTATACAAC---GACGAGGAAAAT-----------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTTCCTTTGAAAATACCCAGAGTCAGTGACACAAGATGGTTGTCAATTAAATTGGCAGTATCCAGAATTTTGGATCAGTGGGAAGAGCTGAAGT---TGCACTTCGGCTTGGCAGCAACTAATGAAAAATGCTTCAAA-GCACAAATGGTGCACCAGCAATTCAAC---GACAACGTGAATTATTT------------SizeHit CountTotal NormTotal
No Reads
droYak3
GCTCCGCTTAAAATAATCAGAGTCGCTGACACCAGGTGGCTTTCCATTGAAAATGCATTCAAACGTATCACAGCGCAATGGATAGAGCTAAAGC---TACATTTTCAAACTGCAGCGCTGGAGGAAAAGTGCCACAAA-GCGAAGATATTGAGCAGTCTATAC------GACAAAAAAAATTATTT------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/15/2015 at 03:02 PM