ID:

dmo_273

 Coordinate:

scaffold_6420:74679-74736 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.0 -13.0 -12.9

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dmo_274  scaffold_6327:86784-86808 -
  2. dmo_273  scaffold_6420:74711-74735 +
  3. scaffold_6431:78941-78965 -
  4. scaffold_6482:361037-361061 +
  5. scaffold_6482:1451368-1451392 -
star
  1. dmo_274  scaffold_6327:86816-86840 -
  2. dmo_273  scaffold_6420:74679-74703 +
  3. scaffold_6482:1451400-1451424 -

Sense Strand Reads

CTTAAAATTCCACGAGTTTCGGATGCACGATGACTCTCAATTGAATTGGCAGTGACTAGAATTTTGGAACAGTGGCATGAGCTAACACTTCATTTTGGTATTTCTGGTACCCAAGAAAAATGTTTACAAGCTCAACACCTCAGCGAATTATTTAAGGA
***********************************..........(((((((..(((((((...((((....((((....))))....)))))))))))....)))....))))........************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body
..................................................................................TAACACTTCATTTTGGTATTTCTGG................................................... 25 0 5 5.80 29 11 9 9 0
..................................................AGTGACTAGAATTTTGGAACAGTGG................................................................................... 25 0 3 3.67 11 8 2 0 1
...................................................GTGACTAGAATTTTGGAACAGTGG................................................................................... 24 0 3 3.67 11 10 1 0 0
...................................................GTGACTAGAATTTTGGAACAGTGGC.................................................................................. 25 0 3 2.33 7 6 0 0 1
.............................................TTGGCAGTGACTAGAATTTTGGA.......................................................................................... 23 0 3 1.00 3 1 1 0 1
..................................................................................TAACACTTCATTTTGGTATTTCTG.................................................... 24 0 5 1.00 5 5 0 0 0
..................................................................................TAACACTTCATTTTGGTATTTCT..................................................... 23 0 5 0.80 4 1 3 0 0
..................................................................................TAACACTTCATTTTGGTATTTCTGGT.................................................. 26 0 5 0.80 4 4 0 0 0
..................................................................................TAACACTTCATTTTGGTATTTCTGGTAC................................................ 28 0 5 0.80 4 4 0 0 0
................................................GCAGTGACTAGAATTTTGGAACAGT..................................................................................... 25 0 3 0.67 2 1 0 0 1
..................................................AGTGACTAGAATTTTGGAACAGTGGC.................................................................................. 26 0 3 0.67 2 2 0 0 0
..................................................AGTGACTAGAATTTTGGAACAGTG.................................................................................... 24 0 3 0.67 2 2 0 0 0
..................................................AGTGACTAGAATTTTGGAACAGT..................................................................................... 23 0 3 0.67 2 1 1 0 0
................................................GCAGTGACTAGAATTTTGGAACAGTGG................................................................................... 27 0 3 0.67 2 2 0 0 0
.............................................TTGGCAGTGACTAGAATTTTGGAAC........................................................................................ 25 0 3 0.67 2 2 0 0 0
................................................GCAGTGACTAGAATTTTGGAACA....................................................................................... 23 0 3 0.33 1 1 0 0 0
.................................................CAGTGACTAGAATTTTGGAAC........................................................................................ 21 0 3 0.33 1 1 0 0 0
....................................................TGACTAGAATTTTGGAACAGTGGC.................................................................................. 24 0 3 0.33 1 1 0 0 0
.............................................TTGGCAGTGACTAGAATTTTGGAACA....................................................................................... 26 0 3 0.33 1 1 0 0 0
................................................GCAGTGACTAGAATTTTGGAACAGTA.................................................................................... 26 1 3 0.33 1 1 0 0 0
.............................................TTGGCAGTGACTAGAATTTTGGAACAG...................................................................................... 27 0 3 0.33 1 1 0 0 0
............................................................................................................................TACAAGCTCAACACCTCAGCGAAT.......... 24 0 6 0.33 2 2 0 0 0
.............................................TTGGCAGTGACGAGAATTTTGGAACAG...................................................................................... 27 1 3 0.33 1 1 0 0 0
.............................................TTGGCAGTGACTAGAATTTTGGAA......................................................................................... 24 0 3 0.33 1 1 0 0 0
................................................GCAGTGACTAGAATTTTGGAACAG...................................................................................... 24 0 3 0.33 1 1 0 0 0
............................................................................................................................TACAAGCTCAACACCTCAGCGAATT......... 25 0 6 0.33 2 1 1 0 0
..............................................TGGCAGTGACTAGAATTTTGGAAC........................................................................................ 24 0 3 0.33 1 1 0 0 0
....................................................TGACTAGAATTTTGGAACAGTGGCA................................................................................. 25 0 3 0.33 1 1 0 0 0
.............................................................................................................CCCAAGAAAAATGTTTACAAGCTCAACA..................... 28 0 4 0.25 1 1 0 0 0
..................................................................................TAACACTTCATTTTGGTATTTCC..................................................... 23 1 5 0.20 1 0 1 0 0
.....................................................................................CACTTCATTTTGGTATTTCTGG................................................... 22 0 5 0.20 1 0 0 1 0
..................................................................................TAACACTTCATTTTGGTATTTCTGGTA................................................. 27 0 5 0.20 1 0 1 0 0
........................................................................................TTAATTTTGGTATTTCTGG................................................... 19 1 5 0.20 1 0 1 0 0
...................................................................................AACACTTCATTTTGGTATTTCTG.................................................... 23 0 5 0.20 1 1 0 0 0
.....................................................................................................TTCTGGTACCCAAGAAAAATGTTTACAA............................. 28 0 5 0.20 1 1 0 0 0
..................................................................................TAGCACTTCATTTTGGTATTTCT..................................................... 23 1 5 0.20 1 1 0 0 0
...................................................................................AACACTTCATTTTGGTATTTCTGG................................................... 24 0 5 0.20 1 1 0 0 0
...................................................................................AACTCTTCATTTTGGTATTTCC..................................................... 22 2 5 0.20 1 0 1 0 0
...................................................................................AACACTTCATTTTGGTATTT....................................................... 20 0 5 0.20 1 1 0 0 0
..................................................................................TAATACTTCATTTTGGTATTTCTGG................................................... 25 1 5 0.20 1 0 1 0 0
.............................................................................................................................ACAAGCTCAACACCTCAGCGA............ 21 0 6 0.17 1 1 0 0 0
.......................................................................................................................ATGTTTACAAGCTCAACACCTCA................ 23 0 6 0.17 1 1 0 0 0
..........................................................................................................................TTTACAAGCTCAACACCTCAGC.............. 22 0 6 0.17 1 0 1 0 0
.............................................................................................................................ACAAGCTCAACACCTCAGCGAATTA........ 25 0 6 0.17 1 1 0 0 0
...........................................................................................................................TTACAAGCTCAACACCTCAGCGAATTATC...... 29 1 6 0.17 1 0 1 0 0
.................................................................................................................................GCTCAACACCTCAGCGAATTATTTAA... 26 0 6 0.17 1 1 0 0 0
............................................................ATTTTGGAACAGTTACAT................................................................................ 18 2 20 0.05 1 1 0 0 0

Anti-sense strand reads

GAATTTTAAGGTGCTCAAAGCCTACGTGCTACTGAGAGTTAACTTAACCGTCACTGATCTTAAAACCTTGTCACCGTACTCGATTGTGAAGTAAAACCATAAAGACCATGGGTTCTTTTTACAAATGTTCGAGTTGTGGAGTCGCTTAATAAATTCCT
************************************..........(((((((..(((((((...((((....((((....))))....)))))))))))....)))....))))........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
 V056
head
....................................................................TGTCACCGTACTCGATTGTGAAGT.................................................................. 24 0 4 10.25 41 30 11 0 0 0 0
...................................................................TTGTCACCGTACTCGATTGTGAAGT.................................................................. 25 0 4 7.25 29 27 2 0 0 0 0
.............................................................................................................GGGTTCTTTTTACAAATGTTCGAGT........................ 25 0 4 6.50 26 22 0 1 3 0 0
......................................................................................................................TTACAAATGTTCGAGTTGTGGAGTCGCTT........... 29 0 6 6.50 39 15 11 13 0 0 0
............................................................................................................TGGGTTCTTTTTACAAATGTTCGAGT........................ 26 0 4 4.50 18 14 2 1 1 0 0
..........................................................................................................CATGGGTTCTTTTTACAAATGTTCGAGT........................ 28 0 4 4.25 17 16 1 0 0 0 0
.....................................GTTAACTTAACCGTCACTGATCTT................................................................................................. 24 0 2 4.00 8 8 0 0 0 0 0
.....................................................................GTCACCGTACTCGATTGTGAAGT.................................................................. 23 0 7 3.43 24 21 3 0 0 0 0
.......................................................................................................................TACAAATGTTCGAGTTGTGGAGTCGCTT........... 28 0 6 2.83 17 14 0 3 0 0 0
......................................................................................................................TTACAAATGTTCGAGTTGTGGAGTCGCT............ 28 0 6 2.33 14 11 2 1 0 0 0
........................................................................................................................ACAAATGTTCGAGTTGTGGAGTCGCTT........... 27 0 6 2.17 13 11 0 1 1 0 0
........................................................................................................................ACAAATGTTCGAGTTGTGGAGTCGCT............ 26 0 6 1.50 9 9 0 0 0 0 0
..................................................................CTTGTCACCGTACTCGATTGTGAAGT.................................................................. 26 0 4 1.50 6 3 1 1 0 1 0
.................................................................CCTTGTCACCGTACTCGATTGTGAAGT.................................................................. 27 0 4 1.50 6 3 3 0 0 0 0
.........................................................................................................................CAAATGTTCGAGTTGTGGAGTCGCTT........... 26 0 6 1.33 8 7 1 0 0 0 0
....................................................................TGTCACCGTACTCGATTGTGAATT.................................................................. 24 1 4 1.25 5 0 5 0 0 0 0
.................................................................................................................................CGAGTTGTGGAGTCGCTTAATAAATT... 26 0 6 1.17 7 6 1 0 0 0 0
.............................................................................................................GGGTTCTTTTTACAAATGTTCGAGTTGT..................... 28 0 4 1.00 4 4 0 0 0 0 0
...........................................................................................................ATGGGTTCTTTTTACAAATGTTCGAGT........................ 27 0 4 1.00 4 3 1 0 0 0 0
.............................................................................................................GGGTTCTTTTTACAAATGTTCGAG......................... 24 0 4 1.00 4 4 0 0 0 0 0
............................................................................................................TGGGTTCTTTTTACAAATGTTCGAGTT....................... 27 0 4 1.00 4 3 1 0 0 0 0
..............................................................................................................GGTTCTTTTTACAAATGTTCGAGT........................ 24 0 4 0.75 3 3 0 0 0 0 0
..........................................................................................................CATGGGTTCTTTTTACAAATGTTCGAGTT....................... 29 0 4 0.75 3 3 0 0 0 0 0
.............................................................................................................GGGTTCTTTTTACAAATGTTCGAGTT....................... 26 0 4 0.75 3 3 0 0 0 0 0
....................................................................TGTCACCGTACTCGATTGTGAAG................................................................... 23 0 4 0.75 3 3 0 0 0 0 0
.........................................................................................................CCATGGGTTCTTTTTACAAATGTTCGAGT........................ 29 0 4 0.75 3 1 2 0 0 0 0
......................................................................................................................CTACAAATGTTCGAGTTGTGGAGTCGCTT........... 29 1 6 0.67 4 1 3 0 0 0 0
................................................................................CGATTGTGAAGTAAAACCATAAAGAC.................................................... 26 0 5 0.60 3 1 2 0 0 0 0
.......................................................................CACCGTACTCGATTGTGAAGT.................................................................. 21 0 7 0.57 4 1 3 0 0 0 0
.......................................TAACTTAACCGTCACTGATCT.................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0
....................................................................TGTCACCGTACTCGATTGTGTAGT.................................................................. 24 1 4 0.50 2 0 2 0 0 0 0
.......................................................................................................................TACAAATGTTCGAGTTGTGGAGTCGCT............ 27 0 6 0.50 3 3 0 0 0 0 0
....................................GGTTAACTTAACCGTCACTGATCTT................................................................................................. 25 1 2 0.50 1 0 1 0 0 0 0
......................................................................................................................TTACAAATGTTCGAGTTGTGGAGTCGATT........... 29 1 6 0.50 3 0 3 0 0 0 0
......................................................................................................................TTACAAATGTTCGAGTTGTGGAGT................ 24 0 6 0.50 3 2 0 1 0 0 0
...............................................................AACCTTGTCACCGTACTCGATTGTGAAGT.................................................................. 29 0 4 0.50 2 2 0 0 0 0 0
..................................................................CTTGTCACCGTACTCGATTTTGAAGT.................................................................. 26 1 4 0.50 2 0 2 0 0 0 0
.........................................ACTTAACCGTCACTGATCTTAAAACCT.......................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0
.......................................................................CACCGTACTCGATTGTGAAGTAAAACCAT.......................................................... 29 0 7 0.43 3 2 1 0 0 0 0
......................................................................TCACCGTACTCGATTGTGAAGT.................................................................. 22 0 7 0.43 3 1 1 0 1 0 0
................................................................................................CCATAAAGACCATGGGTTCTTT........................................ 22 0 5 0.40 2 0 2 0 0 0 0
......................................................................................................AGACCATGGGTTCTTTTTACAAATGTT............................. 27 0 5 0.40 2 2 0 0 0 0 0
....................................................................................................AAAGACCATGGGTTCTTTTTACAAATGT.............................. 28 0 5 0.40 2 2 0 0 0 0 0
.......................................................................................................GACCATGGGTTCTTTTTACAAATGT.............................. 25 0 5 0.40 2 2 0 0 0 0 0
......................................................................................................................TTACAAATGTTCGAGTTGTGGAGTCGC............. 27 0 6 0.33 2 2 0 0 0 0 0
............................................CAACCGTCACTGATCTTAAAACCT.......................................................................................... 24 1 3 0.33 1 0 1 0 0 0 0
..............................................................................................................................GTTCGAGTTGTGGAGTCGCTTAAT........ 24 0 6 0.33 2 2 0 0 0 0 0
..........................................................................................................................AAATGTTCGAGTTGTGGAGTCGCTT........... 25 0 6 0.33 2 2 0 0 0 0 0
....................................................................................................................................GTTGTGGAGTCGCTTAATAAATT... 23 0 6 0.33 2 2 0 0 0 0 0
......................................................................TCACCGTACTCGATTGTGAATT.................................................................. 22 1 7 0.29 2 0 2 0 0 0 0
.....................................................................GTCACCGTACTCGATTGTGAAG................................................................... 22 0 7 0.29 2 2 0 0 0 0 0
......................................................................CCACCGTACTCGATTGTGAAGT.................................................................. 22 1 7 0.29 2 0 2 0 0 0 0
............................................................................................................TGGGTTCTTTTTACGAATGTTCGAGT........................ 26 1 4 0.25 1 1 0 0 0 0 0
...........................................................................................................AAGGGTTCTTTTTACAAATGTTCGAGTT....................... 28 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................CCATGGGTTCTTTTTACAAATGTTCGATT........................ 29 1 4 0.25 1 0 1 0 0 0 0
..........................................................................................................CATGGGTTCTTTTTACAAATGTTCGATT........................ 28 1 4 0.25 1 0 1 0 0 0 0
...........................................................................................................ATGGGTTCTTTTTACAAATGTTCGA.......................... 25 0 4 0.25 1 1 0 0 0 0 0
....................................................................TGTCACCGTACTCGATTGTG...................................................................... 20 0 4 0.25 1 1 0 0 0 0 0
....................................................................TGTCACCGTACTCGATTGTGAAGGC................................................................. 25 2 4 0.25 1 0 1 0 0 0 0
.................................................................CCTTGTCACCGTACTCGATTGTGAA.................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
...........................................................................................................CTGGGTTCTTTTTACAAATGTTCGAGT........................ 27 1 4 0.25 1 1 0 0 0 0 0
....................................................................TGTCACCTTACTCGATTGTGAATT.................................................................. 24 2 4 0.25 1 0 1 0 0 0 0
...................................................................TTGTCACCGTACTCGATTG........................................................................ 19 0 4 0.25 1 1 0 0 0 0 0
....................................................................TGTCGCCGTACTCGATTGTGAAGT.................................................................. 24 1 4 0.25 1 0 1 0 0 0 0
...........................................................................................................ATGGGTTCTTTTTACAAATGTTCGAGTT....................... 28 0 4 0.25 1 1 0 0 0 0 0
...................................................................ATGTCACCGTACTCGATTGTGAAGT.................................................................. 25 1 4 0.25 1 1 0 0 0 0 0
..................................................................ATTGTCACCGTACTCGATTGTGAAGT.................................................................. 26 1 4 0.25 1 0 1 0 0 0 0
............................................................................................................CGGGTTCTTTTTACAAATGTTCGATT........................ 26 2 4 0.25 1 0 1 0 0 0 0
..............................................................................................................GGTTCTTTTTACAAATGTTCGAGTT....................... 25 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................TGGGTTCTTTTTACAAATGTTCGAGTTGT..................... 29 0 4 0.25 1 1 0 0 0 0 0
..........................................................................................................CATGGGTTCTTTTTACAAATGTTCTAGT........................ 28 1 4 0.25 1 0 1 0 0 0 0
...................................................................TTGTCACCCAACTCGATTGTGAATT.................................................................. 25 3 4 0.25 1 0 1 0 0 0 0
....................................................................TGTCACCGTACTCGATTGTGAAGTGA................................................................ 26 1 4 0.25 1 1 0 0 0 0 0
....................................................................TGTCACCGTACGCGATTGTGAAG................................................................... 23 1 4 0.25 1 1 0 0 0 0 0
..........................................................................................................CATGGGTTCTTTTTACAAATGTCCGAGT........................ 28 1 4 0.25 1 1 0 0 0 0 0
..................................................................CTTGTCACCGTACTCGATTGTGAAG................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
...................................................................CTGTCACCGTACTCGATTGTGAAGT.................................................................. 25 1 4 0.25 1 0 1 0 0 0 0
..........................................................................................................CATGGGTTCTTTTTACGAATGTTCGAGT........................ 28 1 4 0.25 1 1 0 0 0 0 0
..............................................................................................................GGTCCTTTTTACAAATGTTCGAGT........................ 24 1 4 0.25 1 1 0 0 0 0 0
...................................................................TTGTCACCGTACTCGATTGTGAAG................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
................................................................ACCTTGTCACCGTACTCGATTGTGAAGT.................................................................. 28 0 4 0.25 1 1 0 0 0 0 0
..................................................................CTTGTCACCGTACTCGATTGTGAATT.................................................................. 26 1 4 0.25 1 0 1 0 0 0 0
....................................................................TGTCACCGTACTCGTTTGTGAAGT.................................................................. 24 1 4 0.25 1 1 0 0 0 0 0
...........................................................................................................ATGGGTTCTTTTTACAAATGTTCGAG......................... 26 0 4 0.25 1 1 0 0 0 0 0
....................................................................................................AAAGACCATGGGTTCTTTTTACAAATG............................... 27 0 5 0.20 1 1 0 0 0 0 0
....................................................................................................AAAGACCATGGGTTCTTTTTACAAACGT.............................. 28 1 5 0.20 1 0 1 0 0 0 0
.....................................................................................................AAGACCATGGGTTCTTTTTACAAATTT.............................. 27 1 5 0.20 1 0 1 0 0 0 0
.........................................................................................................CCATGGGTTCTTTTTACAAACGT.............................. 23 1 5 0.20 1 0 1 0 0 0 0
..........................................................................................................CATGGGTTCTTTTTACAAATGTT............................. 23 0 5 0.20 1 1 0 0 0 0 0
....................................................................................................AAAGACCATGGGTTCTTTTT...................................... 20 0 5 0.20 1 1 0 0 0 0 0
......................................................................................TGAAGTAAAACTATAAAGACCATGGTT............................................. 27 2 5 0.20 1 0 1 0 0 0 0
.......................................................................................GAAGTAAAACCATAAAGACCATGGGT............................................. 26 0 5 0.20 1 1 0 0 0 0 0
..................................................................................ATTGTGAAGTAAAACCATAAAGACCAT................................................. 27 0 5 0.20 1 1 0 0 0 0 0
....................................................................................TGTGAAGTAAAACCATAAAGACCAT................................................. 25 0 5 0.20 1 0 1 0 0 0 0
........................................................................................................ACCATGGGTTCTTTTTACAAATGTT............................. 25 0 5 0.20 1 1 0 0 0 0 0
.........................................................................................................CCATGGGTTCTTTTTACAAATGGT............................. 24 1 5 0.20 1 0 1 0 0 0 0
...................................................................................TTGTGAAGTAAAACCATAAAGACCA.................................................. 25 0 5 0.20 1 1 0 0 0 0 0
............................................................TAAAACCTTGTCAATGTA................................................................................ 18 2 20 0.20 4 4 0 0 0 0 0
.........................................................................................................CCATGGGTTCTTTTTACAAATGT.............................. 23 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................CCATGGGTTCTTTTTACAAATGTT............................. 24 0 5 0.20 1 0 1 0 0 0 0
...................................................................................................TAAAGACCATGGGTTCTTTTT...................................... 21 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................CGAGTTGCGGAGTCGCTTAA......... 20 1 6 0.17 1 0 1 0 0 0 0
.................................................................................................................................CGAGTTGTGGAGTCGCTTAATAAATTC.. 27 0 6 0.17 1 0 1 0 0 0 0
.................................................................................................................TCTTTTTACAAATGTTCGAGTTGT..................... 24 0 6 0.17 1 1 0 0 0 0 0
..............................................................................................................................TTTCGAGTTGTGGAGTCGCTT........... 21 1 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................CGAGTTGTGGAGTCGCCTAATAAATT... 26 1 6 0.17 1 1 0 0 0 0 0
.......................................................................................................................TACAAATGTTCGAGTTGTGGAGT................ 23 0 6 0.17 1 1 0 0 0 0 0
....................................................................................................................................GTTGTGGAGTCGCTTAATAAATTCCT 26 0 6 0.17 1 1 0 0 0 0 0
...............................................................................................................................TTCGAGTTGTGGAGTCGCTT........... 20 0 6 0.17 1 1 0 0 0 0 0
............................................................................................................................ATGTTCGAGTTGTGGAGTCGCTGA.......... 24 1 6 0.17 1 0 1 0 0 0 0
......................................................................................................................TTACAAATGTTCGAGTTGTGGAGTCG.............. 26 0 6 0.17 1 0 0 1 0 0 0
......................................................................................................................TTACAAATGTTCGAGTTGTGGAGTCGCGT........... 29 1 6 0.17 1 0 1 0 0 0 0
......................................................................................................................CTACAAATGTTCGAGTTGTGGAGTCGCT............ 28 1 6 0.17 1 0 1 0 0 0 0
................................................................................................................................TCGAGTAGTGGAGTCTCATAAT........ 22 3 6 0.17 1 0 0 0 0 0 1
......................................................................................................................................TGTGGAGTCGCTTAATAAAT.... 20 0 6 0.17 1 0 0 1 0 0 0
.................................................................................................................................CGAGTTGTGGAGTCGCTTAATAAAT.... 25 0 6 0.17 1 1 0 0 0 0 0
..........................................................................................................................AAATGTTCGAGTTGTGGAGTCGCT............ 24 0 6 0.17 1 1 0 0 0 0 0
......................................................................................................................TTAGAAATGTTCGAGTTGTGGAGTCGGT............ 28 2 6 0.17 1 0 1 0 0 0 0
.......................................................................................................................TACAAATGTTCGAGTTGTTGAGTCGCTT........... 28 1 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................AATGTTCGAGTTGTGGAGTCGCTT........... 24 0 6 0.17 1 0 0 0 1 0 0
....................................................................................................................................GTTGTGGAGTCGCTTAATAAATCCC. 25 1 6 0.17 1 0 1 0 0 0 0
......................................................................................................................TTACAAATGTTCGAGTTGCGGAGTCGCTT........... 29 1 6 0.17 1 0 1 0 0 0 0
.......................................................................................................................AACAAATGTTCGAGTTGTGGAGTCGCT............ 27 1 6 0.17 1 0 0 1 0 0 0
..................................................................................................................CTTTTTACAAATGTTCGAGTTGTGGAGT................ 28 0 6 0.17 1 1 0 0 0 0 0
.....................................................................GTCACCGTACTCGATTGTG...................................................................... 19 0 7 0.14 1 1 0 0 0 0 0
......................................................................TCACCGTGCTCGATTGTGAAGT.................................................................. 22 1 7 0.14 1 0 1 0 0 0 0
......................................................................ACACAGTACTCGATTGTGAAGT.................................................................. 22 2 7 0.14 1 0 1 0 0 0 0
......................................................................TCACCGTACTCGATTGTGAAGTCGACC............................................................. 27 3 7 0.14 1 1 0 0 0 0 0
......................................................................TCACCGTACTCGATTGTGAAGTA................................................................. 23 0 7 0.14 1 1 0 0 0 0 0
.....................................................................GTCACCGTACTCGATTGTGAAGTGCATC............................................................. 28 3 7 0.14 1 1 0 0 0 0 0
......................................................................TCACCGCACTCGATTGTGAAGT.................................................................. 22 1 7 0.14 1 0 1 0 0 0 0
........................................................................ACCGTACTCGATTGTGAAGT.................................................................. 20 0 7 0.14 1 1 0 0 0 0 0
.........................................................................CCGTACTCGATTGTGAAGT.................................................................. 19 0 7 0.14 1 0 1 0 0 0 0
........................................................................ACCGTACTCGATTGTGAAGTAAAACCAT.......................................................... 28 0 7 0.14 1 1 0 0 0 0 0
.....................................................................GTCACCGTACTCGATTGTGAATT.................................................................. 23 1 7 0.14 1 0 1 0 0 0 0
...........................................................................GTACTCGATTGTGAAGTAAAACCAT.......................................................... 25 0 7 0.14 1 1 0 0 0 0 0
......................................................................CAAACGTACTCGATTGTGAAG................................................................... 21 3 14 0.07 1 1 0 0 0 0 0
.........GATGGTCAAAGGCTACGTG.................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6420:74629-74786 + dmo_273 C-TTAAAATTCCACGAGTTTCGGATGCACGATGACTCTCAATTGAATTGGCAGTGACTAGAATTTTGGAACAGTGGCATGAGCTAACA---CTTCATTTTGGTATTTCTGGTACCCAAGAAAAATGTTTACAAGCTCAACACCTCAGCGAATTATTTAAGGA
droWil2 scf2_1100000004953:466155-466312 + C-TTAAAATTCCCAGAGTTTGTGACACTCGATGGCTGTCCATTGAAATGGCTGTAAGTCGTATTTTGGACCAGTGGCATGAACTTAAA---ACTCATTTTGGGATTGCTGGTATGGAAGAAAAATGCAAAACAGCAAAAATTTTGTACCAATTGTTTTCTGA
dp5 XL_group1a:1748046-1748207 + CGTAAAAATTCCAAAAGTAAGCGATACGCGATGGCCATCTATTGAAGCTGCTGTATGCAGAATCGAGGAGCAGTGGGATGAGCTTAAGGTAGTGCACCTCGCCCTAGCTGCAACCGTCGAAAGATGCCACAAGGCAACAATTTTAAATGAACTATTTTCTGA
droPer2 scaffold_28:104477-104638 - CGTAAAAATTCCAAAAGTAAGCGATACGCGATGGCTATCTATTGAAACTGCTGTATGCAGAATCGAGGAGCAGTGGGATGAGCTTAAGGTAGTGCACCTCGCCCTAGCTGCAACCGTCGAAAGATGCCACAAGGCAAAAATTTTAAATGAACTATTTTCTGA
droAna3 scaffold_13337:10299418-10299575 + T-TGAAAATCCCTAGAGTCTGCGAGACTAGATGGCTTTCAATTGAGCTGGCGGTGTCCAGGATTGTTGATCAGTGGGCTGAGCTAAAA---TTGCATTTTTCCATAGCTTCACTCCAGGAGAACTGTCACAAAGCCAAAATCTTGCACGAACTGTACAGTGA
droBip1 scf7180000393023:10514-10667 + C-TTAAAATCCCAAGAGTTTGTGACACTCGTTGGTTGTCAATAGAAACTGCAGTTAGCCGAATTTTATATCAGTGGGATGCGCTTAAA---TTGCATTTTGATATTGCAGCTACACAAGAAAAGTGTCATAAAGCACAAATTTTAAAGAATATGTATG----
droKik1 scf7180000300928:6127-6284 - C-TCAAAATACCTCGAGTTTGCGACACACGGTGGCTGTCGATTGAAGCTGCGGTGACCCGAATTCTGCAGCAGTGGATTGAGCTAAAA---CTCCACTTCAACATTGCTGCAACAAAAGAAAAATGTTTCAACGCCCAAACGTTGCACAAATTATTCAATAA
droFic1 scf7180000454169:73153-73310 + C-TTAAAATTCCAAGGGTTTGTGACACAAGATGGTTGTCCATTGAGATGGCGGTAACACGAATTTTAGACCAGTGGCATGAACTGAAA---ACTCATTTTGGAATTGCTGCTATGAGTGAAAAATGCAAAACAGCTAAAATCCTTTACGCATCTTTCTGCGA
droEle1 scf7180000488598:1621-1778 - T-TAAAAATTCTCAAGGTCAGCGACACTAGATGGCTATCCATCGAAAGTGCAGTATCTCGAATCGAGGATCAGTGGGAGGAATTAAAG---TTACACTTTGCCTTAGCCTCTACAAATGAAAGTTGTCACAAAGCAAAAATATTGAATATGCTATCTGAAGA
droRho1 scf7180000762205:8875-9032 + T-TGAAAATACCGAGAGTATCTGACACGAGGTGGTTGTCAATAGAGAGTGCAGTTTCCCGAATAGTAGATCAGTGGACAGAGTTAAAG---CTCCATTTCGAGTTAGCAGCTACTGTGGAAAAATGCCACAAGGCTCACATTCTCAACGGTCTATATAAGGA
droBia1 scf7180000302291:1507945-1508101 - C-TTAAAATTCCAAGGGTTTGTGACACTAGATGGTTGTCCATCGAAATGGCAGTAACACGAATCTTAGACCAGTGACATGAACTGAAA---ACTCACTTTGGAATTGCTGCTATGAGTGAAAAATGCAAAACAGCTAAAATCCTGTATGAATCTTTC-TGGA
droTak1 scf7180000415770:8847-9004 - C-TAAAAATCCCTAGAGTCTGTGATACTAGGTGGCTATCAATTGAGTGTGCAGTTAAGAGAATTCTACAACAATGGAATGAGTTAAAA---ACACATTTTAACCATGCTGCTTTGAATGAAAATTGTCATAAGGCCGAAATTTTACGAGATTTATACAACGA
droEug1 scf7180000409744:10107-10264 + C-TCAAAATACCTCGAGTTTGCGACACAAGGTGGCTATCAATTGAAGCTGCGGTGACCCGAATTCTGCAGCAGTGGATTGAGCTAAAA---CTCCACTTCAACATTGCTGCAACAAAAGAAAAATGTTTCAAGGCTCAAACGTTGCACAAATTATTCAGTGA
droYak3 v2_chr3h_random_002:778056-778190 - C-TTTAAATTCCAAAAGTCTGCGAAACACGGTGGCTTTCCATAGAAACAGCAGTTGCAAGAATTGTGGATCAGTGGATTGAACTTAAG---CTGCATTTTAGCATTGCAGCAACAAAAGAAAAATGTTTTAAAGCGCAA-----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
C-TTAAAATTCCACGAGTTTCGGATGCACGATGACTCTCAATTGAATTGGCAGTGACTAGAATTTTGGAACAGTGGCATGAGCTAACA---CTTCATTTTGGTATTTCTGGTACCCAAGAAAAATGTTTACAAGCTCAACACCTCAGCGAATTATTTAAGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................TAACA---CTTCATTTTGGTATTTCTGG...................................................2555.80291190090
...................................................AGTGACTAGAATTTTGGAACAGTGG......................................................................................2533.6711800021
....................................................GTGACTAGAATTTTGGAACAGTGG......................................................................................2433.67111000010
....................................................GTGACTAGAATTTTGGAACAGTGGC.....................................................................................2532.337600001
..............................................TTGGCAGTGACTAGAATTTTGGA.............................................................................................2331.003100011
...................................................................................TAACA---CTTCATTTTGGTATTTCTG....................................................2451.005500000
...................................................................................TAACA---CTTCATTTTGGTATTTCT.....................................................2350.804100030
...................................................................................TAACA---CTTCATTTTGGTATTTCTGGT..................................................2650.804400000
...................................................................................TAACA---CTTCATTTTGGTATTTCTGGTAC................................................2850.804400000
.................................................GCAGTGACTAGAATTTTGGAACAGT........................................................................................2530.672100001
...................................................AGTGACTAGAATTTTGGAACAGTGGC.....................................................................................2630.672200000
...................................................AGTGACTAGAATTTTGGAACAGTG.......................................................................................2430.672200000
...................................................AGTGACTAGAATTTTGGAACAGT........................................................................................2330.672100010
.................................................GCAGTGACTAGAATTTTGGAACAGTGG......................................................................................2730.672200000
..............................................TTGGCAGTGACTAGAATTTTGGAAC...........................................................................................2530.672200000
.................................................GCAGTGACTAGAATTTTGGAACA..........................................................................................2330.331100000
..................................................CAGTGACTAGAATTTTGGAAC...........................................................................................2130.331100000
.....................................................TGACTAGAATTTTGGAACAGTGGC.....................................................................................2430.331100000
..............................................TTGGCAGTGACTAGAATTTTGGAACA..........................................................................................2630.331100000
.................................................GCAGTGACTAGAATTTTGGAACAGTA.......................................................................................2630.331100000
..............................................TTGGCAGTGACTAGAATTTTGGAACAG.........................................................................................2730.331100000
................................................................................................................................TACAAGCTCAACACCTCAGCGAAT..........2460.332200000
..............................................TTGGCAGTGACTAGAATTTTGGAA............................................................................................2430.331100000
.................................................GCAGTGACTAGAATTTTGGAACAG.........................................................................................2430.331100000
................................................................................................................................TACAAGCTCAACACCTCAGCGAATT.........2560.332100010
...............................................TGGCAGTGACTAGAATTTTGGAAC...........................................................................................2430.331100000
.....................................................TGACTAGAATTTTGGAACAGTGGCA....................................................................................2530.331100000
.................................................................................................................CCCAAGAAAAATGTTTACAAGCTCAACA.....................2840.251100000
...................................................................................TAACA---CTTCATTTTGGTATTTCC.....................................................2350.201000010
......................................................................................CA---CTTCATTTTGGTATTTCTGG...................................................2250.201010000
...................................................................................TAACA---CTTCATTTTGGTATTTCTGGTA.................................................2750.201000010
....................................................................................AACA---CTTCATTTTGGTATTTCTG....................................................2350.201100000
.........................................................................................................TTCTGGTACCCAAGAAAAATGTTTACAA.............................2850.201100000
....................................................................................AACA---CTTCATTTTGGTATTTCTGG...................................................2450.201100000
....................................................................................AACA---CTTCATTTTGGTATTT.......................................................2050.201100000
.................................................................................................................................ACAAGCTCAACACCTCAGCGA............2160.171100000
...........................................................................................................................ATGTTTACAAGCTCAACACCTCA................2360.171100000
..............................................................................................................................TTTACAAGCTCAACACCTCAGC..............2260.171000010
.................................................................................................................................ACAAGCTCAACACCTCAGCGAATTA........2560.171100000
...............................................................................................................................TTACAAGCTCAACACCTCAGCGAATTATC......2960.171000010
.....................................................................................................................................GCTCAACACCTCAGCGAATTATTTAA...2660.171100000
droWil2
C-TTAAAATTCCCAGAGTTTGTGACACTCGATGGCTGTCCATTGAAATGGCTGTAAGTCGTATTTTGGACCAGTGGCATGAACTTAAA---ACTCATTTTGGGATTGCTGGTATGGAAGAAAAATGCAAAACAGCAAAAATTTTGTACCAATTGTTTTCTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................CATGAACTTAAA---ACTCATTTTGGG...........................................................2422.50505000
............................................................................CATGAACTTAAA---ACTCATTTTGGGA..........................................................2521.50303000
.............................................AATGGCTGTAAGTCGTATTTTGG..............................................................................................2321.50302100
.............................................................................ATGAACTTAAA---ACTCATTTTGGGAT.........................................................2521.00202000
................................................................................................................ATGGAAGAAAAATGCAAAACAGC...........................2311.00101000
...............................................TGGCTGTAAGTCGTATTTTGGACCAG.........................................................................................2621.00200020
..............................................................................................CATTTTGGGATTGCTGGTATGGA.............................................2321.00202000
.................................................................................................TTTGGGATTGCTGGTATGGAAGAAAAAA.....................................2811.00101000
...............................................................TTTGGACCAGTGGCATGAACTTAAA---AC.....................................................................2721.00210010
......AATTCCCAGAGTTTGTGACACTCGA...................................................................................................................................2521.00202000
...................................TGTCCATTGAAATGGCTGTAAGTCG......................................................................................................2521.00202000
....................................................................................TAAA---ACTCATTTTGGGATTGCTGG...................................................2421.00202000
.....................................................................................AAA---ACTCATTTTGGGATTGCTGGTA.................................................2521.00201010
.....................................TCCATTGAAATGGCTGTAAGTCGTATTT.................................................................................................2821.00201010
..............................................................................................CATTTTGGGATTGCTGGTATG...............................................2121.00201010
.............................................................................ATGAACTTAAA---ACTCATTTTGGGA..........................................................2420.50101000
....................................GTCCATTGAAATGGCTGTAAGTCG......................................................................................................2420.50101000
.............AGAGTTTGTGACACTCGA...................................................................................................................................1820.50101000
......AATTCCCAGAGTTTGTGACACTCG....................................................................................................................................2420.50101000
........TTCCCAGAGTTTGTGACACTCGA...................................................................................................................................2320.50101000
.............................................................................ATGAACTTAAA---ACTCATTTTGGG...........................................................2320.50101000
..............................................................TTTTGGACCAGTGGCATGAAC...............................................................................2120.50100010
...............................................TGGCTGTAAGTCGTATTTTGG..............................................................................................2120.50101000
...............................................................TTTGGACCAGTGGCATGAA................................................................................1920.50100010
...............................TGGCTGTCCATTGAAATGGCTGTAAG.........................................................................................................2620.50100010
.........................................................TCGTATTTTGGACCAGTGGCATGAACT..............................................................................2720.50100010
............................................................................................CTCATTTTGGGATTGCTGGTA.................................................2120.50100010
...TAAAATTCCCAGAGTTTGTGACACT......................................................................................................................................2520.50110000
.............................GATGGCTGTCCATTGAAATGGCTG.............................................................................................................2420.50101000
..........................................TGAAATGGCTGTAAGTCGTATTT.................................................................................................2320.50101000
..............GAGTTTGTGACACTCGATGGCTGT............................................................................................................................2420.50101000
...TAAAATTCCCAGAGTTTGTGACACTCGA...................................................................................................................................2820.50101000
....................................................GTAAGTCGTATTTTGGACCAGTGGCA....................................................................................2620.50100010
...............................................TGGCTGTAAGTCGTATTTTGGA.............................................................................................2220.50101000
...........................................................................................ACTCATTTTGGGATTGCTGGTAT................................................2320.50101000
...............................................................................................ATTTTGGGATTGCTGGTATGGA.............................................2220.50101000
............................................................TATTTTGGACCAGTGGCATGAACT..............................................................................2420.50100010
...............................................................................................ATTTTGGGATTGCTGGTATGGAAG...........................................2420.50101000
......AATTCCCAGAGTTTGTGACACTC.....................................................................................................................................2320.50101000
......................................CCATTGAAATGGCTGTAAGTCGT.....................................................................................................2320.50101000
.................TTTGTGACACTCGATGGCTGTCCATTG......................................................................................................................2720.50100010
............................................................TATTTTGGACCAGTGGCATGA.................................................................................2120.50100010
............................................................................CATGAACTTAAA---ACTCATTTTGGGAT.........................................................2620.50101000
..................................................CTGTAAGTCGTATTTTGGACC...........................................................................................2120.50101000
.........................................................................................................................................AAATTTTGTACCAATTGTTTTCTGA2520.50100010
....................................................................................TAAA---ACTCATTTTGGGATTGCTGGTA.................................................2620.50100010
dp5
CGTAAAAATTCCAAAAGTAAGCGATACGCGATGGCCATCTATTGAAGCTGCTGTATGCAGAATCGAGGAGCAGTGGGATGAGCTTAAGGTAGTGCACCTCGCCCTAGCTGCAACCGTCGAAAGATGCCACAAGGCAACAATTTTAAATGAACTATTTTCTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................CATCTATTGAAGCTGCTGTATGC........................................................................................................23115.001501220000100
.....................................................TATGCAGAATCGAGGAGCAGTGGG.....................................................................................24110.00100200000800
.......................................................TGCAGAATCGAGGAGCAGTGG......................................................................................21110.00100300001600
.....................................................TATGCAGAATCGAGGAGCAGTGGGA....................................................................................2519.0090500000400
........................TACGCGATGGCCATCTATTGAAGC..................................................................................................................2419.0090710000100
................................................................................................................ACCGTCGAAAGATGCCACAAGGC...........................2316.0060600000000
.......................................................TGCAGAATCGAGGAGCAGTGGGA....................................................................................2316.0060500000100
................................................................................................................ACCGTCGAAAGATGCCACAAGG............................2215.0050500000000
.....................................................TATGCAGAATCGAGGAGCAGTGG......................................................................................2314.0040300000100
..................................CCATCTATTGAAGCTGCTGTATG.........................................................................................................2314.0040200000200
.......................................................TGCAGAATCGAGGAGCAGTGGG.....................................................................................2213.0030000000300
.........................................................................TGGGATGAGCTTAAGGTAGTGCACC................................................................2513.0030000000300
..................................CCATCTATTGAAGCTGCTGTATGC........................................................................................................2412.0020100100000
................................................TGCTGTATGCAGAATCGAGGA.............................................................................................2112.0020200000000
.............................................................................ATGAGCTTAAGGTAGTGCACCTCGCCC..........................................................2712.0020000000200
...................................CATCTATTGAAGCTGCTGTATG.........................................................................................................2212.0020200000000
..............................................................................................................CAACCGTCGAAAGATGCCACAAGG............................2412.0020200000000
...............................................................................................................AACCGTCGAAAGATGCCACAAG.............................2212.0020200000000
...................................CATCTATTGAAGCTGCTGTATGCAGAA....................................................................................................2712.0020100001000
...................................CATCTATTGAAGCTGCTGTAT..........................................................................................................2111.0010100000000
.........................................................CAGAATCGAGGAGCAGTGGGATGAGCT..............................................................................2711.0010100000000
...............................................................................................................AACCGTCGAAAGATGCCACAAGGC...........................2411.0010100000000
..............................................................................................................CAACCGTCGAAAGATGCCACAAGGC...........................2511.0010001000000
........................TACGCGATGGCCATCTATTGAAG...................................................................................................................2311.0010100000000
..................................................................................................TCGCCCTAGCTGCAACCGTC............................................2011.0010100000000
..........................................................AGAATCGAGGAGCAGTGGGAT...................................................................................2111.0010100000000
...............................................................................................................AACCGTCGAAAGATGCCACAAGG............................2311.0010100000000
.........TCCAAAAGTAAGCGATACGCGATGG................................................................................................................................2511.0010100000000
.................................................................................................................CCGTCGAAAGATGCCACAAGGC...........................2211.0010100000000
............................................................................................TGCACCTCGCCCTAGCTGCAACCGTCGA..........................................2811.0010100000000
.........................................................................TGGGATGAGCTTAAGGTAGG.....................................................................2011.0010100000000
.......ATTCCAAAAGTAAGCGATACGCGA...................................................................................................................................2411.0010100000000
.........................................................................................TAGTGCACCTCGCCCTAGC......................................................1911.0010100000000
......AATTCCAAAAGTAAGCGATACGCGA...................................................................................................................................2511.0010100000000
.......................................TATTGAAGCTGCTGTATGCAA......................................................................................................2111.0010100000000
..............................................................................................................CAACCGTCGAAAGATGCCACAAGGCAAC........................2811.0010010000000
..............................................................................TGAGCTTAAGGTAGTGCACCTCGCC...........................................................2511.0010100000000
..............................................................................................................CAACCGTCGAAAGATGCCACAAGGCA..........................2611.0010100000000
...............................TGGCCATCTATTGAAGCTGCTG.............................................................................................................2211.0010100000000
..............................................................................TGAGCTTAAGGTAGTGCACCTCG.............................................................2311.0010100000000
...............................................................................................................AACCGTCGAAAGATGCCACAAGGA...........................2411.0010100000000
................................................................................................................ACCGTCGAAAGATGCCACAAGGCAAA........................2611.0010010000000
...............................................................................................ACCTCGCCCTAGCTGCAACCGTCGAAA........................................2711.0010000000100
........................................................................GTGGGATGAGCTTAAGGTAGTGCACCT...............................................................2711.0010000001000
.......................................TATTGAAGCTGCTGTATGCA.......................................................................................................2011.0010100000000
....................................................................AGCAGTGGGATGAGCTTAAGGTAG......................................................................2411.0010100000000
........................................................GCAGAATCGAGGAGCAGTGG......................................................................................2011.0010000000100
.........................................................................TGGGATGAGCTTAAGGTAGTGCACCT...............................................................2611.0010100000000
.......................................................TGCAGAATCGAGGAGCAGTGGGATGA.................................................................................2611.0010100000000
..................................................................................................................CGTCGAAAGATGCCACAAGGCAACA.......................2511.0010100000000
..............................................................................................................CAACCGTCGAAAGATGCCACAAGGCAA.........................2711.0010100000000
.....................................................TATGCAGAATCGAGGAGCAGTGGGAA...................................................................................2611.0010100000000
............AAAAGTAAGCGATACGCGATG.................................................................................................................................2111.0010100000000
..............................................................................................................CAACCGTCGAAAGATGCCACAAG.............................2311.0010100000000
.....................................................TATGCAGAATCGAGGAGCAGTGGGT....................................................................................2511.0010000000100
..............................................................................................................CAACCGTCGAAAGATGCCACAA..............................2211.0010100000000
........................TACGCGATGGCCATCTATTGAAGCT.................................................................................................................2511.0010010000000
................................................................................................................ACCGTCGAAAGATGCCACAAGGCA..........................2411.0010100000000
....................................ATCTATTGAAGCTGCTGTATGC........................................................................................................2211.0010100000000
........................................................GCAGAATCGAGGAGCAGTGGG.....................................................................................2111.0010100000000
......................................................................................AGGTAGTGCACCTCGCCCTAGC......................................................2211.0010100000000
..............................................................................................................................................TTAAATGAACTATTTTCTGA2011.0010100000000
..............................................................................................................CAACCGTCGAAAGATGCCACAAGGCAAA........................2811.0010100000000
.....AAATTCCAAAAGTAAGCGATACGCGA...................................................................................................................................2611.0010100000000
....................................ATCTATTGAAGCTGCTGTAT..........................................................................................................2011.0010100000000
.............AAAGTAAGCGATACGCGATGG................................................................................................................................2111.0010100000000
...............................TGGCCATCTATTGAAGCTG................................................................................................................1911.0010100000000
..................................................................................................................CGTCGAAAGATGCCACAAGGCA..........................2211.0010100000000
.............................................................ATCGAGGAGCAGTGGGATGAA................................................................................2111.0010100000000
........................TACGCGATGGCCATCTATTGAAGCTGC...............................................................................................................2711.0010100000000
........................................................................................................TAGCTGCAACCGTCGAAAGATGCC..................................2411.0010100000000
..............................................................................TGAGCTTAAGGTAGTGCACCTCGCCC..........................................................2611.0010100000000
.........................................................................TGGGATGAGCTTAAGGTAAAA....................................................................2130.3310100000000
droPer2
CGTAAAAATTCCAAAAGTAAGCGATACGCGATGGCTATCTATTGAAACTGCTGTATGCAGAATCGAGGAGCAGTGGGATGAGCTTAAGGTAGTGCACCTCGCCCTAGCTGCAACCGTCGAAAGATGCCACAAGGCAAAAATTTTAAATGAACTATTTTCTGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................TATCTATTGAAACTGCTGTATGC........................................................................................................2313.003020001
............................................................................GATGAGCTTAAGGTAGTGCACCTCG.............................................................2512.002000002
...................................................TGTATGCAGAATCGAGGAGCAGTGG......................................................................................2511.001010000
................................................................................................................ACCGTCGAAAGATGCCACAAGGC...........................2311.001010000
........................................................................................................TAGCTGCAACCGTCGAAAGATGCCA.................................2511.001010000
.............................................................ATCGAGGAGCAGTGGGATGA.................................................................................2011.001001000
..................................................................................CTTAAGGTAGTGCACCTCGC............................................................2011.001010000
.......................................................TGCAGAATCGAGGAGCAGTGGG.....................................................................................2211.001010000
.......................................................TGCAGAATCGAGGAGCAGTGGGA....................................................................................2311.001010000
............................................................................................TGCACCTCGCCCTAGCTGCAACCGTCGA..........................................2811.001000001
...................................TATCTATTGAAACTGCTGTATGCA.......................................................................................................2411.001010000
.GTAAAAATTCCAAAAGTAAGCGA..........................................................................................................................................2311.001010000
....................................................GTATGCAGAATCGAGGAGCAGT........................................................................................2211.001010000
................................................................................................................ACCGTCGAAAGATGCCACAAG.............................2111.001010000
.........TCCAAAAGTAAGCGATACGCG....................................................................................................................................2111.001010000
........................................................................................................TAGCTGCAACCGTCGAAAGAT.....................................2111.001010000
droAna3
T-TGAAAATCCCTAGAGTCTGCGAGACTAGATGGCTTTCAATTGAGCTGGCGGTGTCCAGGATTGTTGATCAGTGGGCTGAGCTAAAA---TTGCATTTTTCCATAGCTTCACTCCAGGAGAACTGTCACAAAGCCAAAATCTTGCACGAACTGTACAGTGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................GGATTGTTGATCAGTGGGCTGAGC...............................................................................2414.004400000
..............................ATGGCTTTCAATTGAGCTGGCGG.............................................................................................................2313.003200100
..............................................................TTGTTGATCAGTGGGCTGAG................................................................................2012.002200000
...........................................................................................................................CTGTCACAAAGCCAAAATCTTGCAC..............2512.002200000
..............................ATGGCTTTCAATTGAGCTGGCGGT............................................................................................................2412.002100010
...........................................................GGATTGTTGATCAGTGGGCTGAG................................................................................2312.002000020
..............................................................................................................CACTCCAGGAGAACTGTCACAAAGCCA.........................2712.002200000
...........................................................GGATTGTTGATCAGTGGGCTGA.................................................................................2211.001100000
..............................................................................................................................TCACAAAGCCAAAATCTTGCACGAAC..........2611.001100000
.......................................................TCCAGGATTGTTGATCAGTGGGCTGAGC...............................................................................2811.001010000
.........................................................................................................................AACTGTCACAAAGCCAAAATCTT..................2311.001010000
......................................................................................AA---TTGCATTTTTCCATAGCTTCACTCCA.............................................2811.001100000
..........................................................AGGATTGTTGATCAGTGGGC....................................................................................2011.001010000
..........................................................................................................................ACTGTCACAAAGCCAAAATCTTGCACG.............2711.001100000
..................................................................................................................................AAAGCCAAAATCTTGCACGAACTGTA......2611.001100000
................................................................GTTGATCAGTGGGCTGAGCTAAAA---.......................................................................2411.001000010
.....................................TCAATTGAGCTGGCGGTGTCC........................................................................................................2111.001100000
........................GACTAGATGGCTTTCAATTGAGCTGGC...............................................................................................................2711.001100000
.......................................................TCCAGGATTGTTGATCAGTGGGCT...................................................................................2411.001100000
............................................................GATTGTTGATCAGTGGGCTGAGC...............................................................................2311.001100000
.......................................................TCCAGGATTGTTGATCAGTGGG.....................................................................................2211.001100000
...............................................................TGTTGATCAGTGGGCTGAGCTT.............................................................................2211.001100000
................................................................................................TTTTTCCATAGCTTCACTCCAGG...........................................2311.001100000
...................................TTTCAATTGAGCTGGCGGTGTC.........................................................................................................2211.001010000
..............................ATGGCTTTCAATTGAGCTGGCGGTG...........................................................................................................2511.001100000
..................................................................................................................................AAAGCCAAAATCTTGCACGAACTG........2411.001100000
..................................................................................................................................AAAGCCAAAATCTTGCACGAACTGTACAG...2911.001100000
..............................ATGGCTTTCAATTGAGCTGGCGGTGT..........................................................................................................2611.001100000
..............................ATGGCTTTCAATTGAGCTGGCG..............................................................................................................2211.001100000
................................................................GTTGATCAGTGGGCTGAGCTAA............................................................................2211.001100000
droBip1
C-TTAAAATCCCAAGAGTTTGTGACACTCGTTGGTTGTCAATAGAAACTGCAGTTAGCCGAATTTTATATCAGTGGGATGCGCTTAAA---TTGCATTTTGATATTGCAGCTACACAAGAAAAGTGTCATAAAGCACAAATTTTAAAGAATATGTATG----SizeHit CountTotal NormTotal
No Reads
droKik1
C-TCAAAATACCTCGAGTTTGCGACACACGGTGGCTGTCGATTGAAGCTGCGGTGACCCGAATTCTGCAGCAGTGGATTGAGCTAAAA---CTCCACTTCAACATTGCTGCAACAAAAGAAAAATGTTTCAACGCCCAAACGTTGCACAAATTATTCAATAASizeHit CountTotal NormTotal
No Reads
droFic1
C-TTAAAATTCCAAGGGTTTGTGACACAAGATGGTTGTCCATTGAGATGGCGGTAACACGAATTTTAGACCAGTGGCATGAACTGAAA---ACTCATTTTGGAATTGCTGCTATGAGTGAAAAATGCAAAACAGCTAAAATCCTTTACGCATCTTTCTGCGASizeHit CountTotal NormTotal
No Reads
droEle1
T-TAAAAATTCTCAAGGTCAGCGACACTAGATGGCTATCCATCGAAAGTGCAGTATCTCGAATCGAGGATCAGTGGGAGGAATTAAAG---TTACACTTTGCCTTAGCCTCTACAAATGAAAGTTGTCACAAAGCAAAAATATTGAATATGCTATCTGAAGASizeHit CountTotal NormTotal
No Reads
droRho1
T-TGAAAATACCGAGAGTATCTGACACGAGGTGGTTGTCAATAGAGAGTGCAGTTTCCCGAATAGTAGATCAGTGGACAGAGTTAAAG---CTCCATTTCGAGTTAGCAGCTACTGTGGAAAAATGCCACAAGGCTCACATTCTCAACGGTCTATATAAGGASizeHit CountTotal NormTotal
No Reads
droBia1
C-TTAAAATTCCAAGGGTTTGTGACACTAGATGGTTGTCCATCGAAATGGCAGTAACACGAATCTTAGACCAGTGACATGAACTGAAA---ACTCACTTTGGAATTGCTGCTATGAGTGAAAAATGCAAAACAGCTAAAATCCTGTATGAATCTTTC-TGGASizeHit CountTotal NormTotal
No Reads
droTak1
C-TAAAAATCCCTAGAGTCTGTGATACTAGGTGGCTATCAATTGAGTGTGCAGTTAAGAGAATTCTACAACAATGGAATGAGTTAAAA---ACACATTTTAACCATGCTGCTTTGAATGAAAATTGTCATAAGGCCGAAATTTTACGAGATTTATACAACGASizeHit CountTotal NormTotal
No Reads
droEug1
C-TCAAAATACCTCGAGTTTGCGACACAAGGTGGCTATCAATTGAAGCTGCGGTGACCCGAATTCTGCAGCAGTGGATTGAGCTAAAA---CTCCACTTCAACATTGCTGCAACAAAAGAAAAATGTTTCAAGGCTCAAACGTTGCACAAATTATTCAGTGASizeHit CountTotal NormTotal
No Reads
droYak3
C-TTTAAATTCCAAAAGTCTGCGAAACACGGTGGCTTTCCATAGAAACAGCAGTTGCAAGAATTGTGGATCAGTGGATTGAACTTAAG---CTGCATTTTAGCATTGCAGCAACAAAAGAAAAATGTTTTAAAGCGCAA-----------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/15/2015 at 03:05 PM