dmo_272

Name	Class	Family	Strand
Copia_I-int	LTR	Copia	+

AAATGAGCCTCGCTTTTTGCAATAAACTCTTTAAACATTGCAAAAATATCTGATTTATGGGTCAAAAGATATGTTACGCAATAGTGTGTATATTGATCAATAAATACAGCGTAATAACTTTTGCCATCTACAGTAGAAGGTGTTATCGGACCACATACATCGGAATGGATAATAAACAAAGGTCTTCTAAT *********************************..............(((((((((.(((((....((((..(((((....))))).))))))))).)))))).)))((((((..(((((((........)))))))..)))).)).......**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M046 female body	M060 embryo	V110 male body	V041 embryo	V056 head
..................................................TGATTTATGGGTCAAAAGATATGTT....................................................................................................................	25	0	5	8.00	40	32	4	4	0	0
..................................................TGATTTATGGGTCAAAAGATATGTTA...................................................................................................................	26	0	5	3.20	16	15	0	1	0	0
..................................................TGATTTATGGGTCAAAAGATATGT.....................................................................................................................	24	0	5	1.60	8	6	1	0	1	0
..................................................................................................................TAACTTTTGCCATCTACAGTAGAAGG...................................................	26	0	4	1.00	4	4	0	0	0	0
..................................................TGATTTATGGGTCAAAAGATATG......................................................................................................................	23	0	5	0.80	4	3	0	0	1	0
..................................................................................................................TAACTTTTGCCATCTACAGTAGAAG....................................................	25	0	4	0.75	3	3	0	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACAGTAG.......................................................	25	0	6	0.67	4	3	0	0	1	0
.................................................................................TAGTGTGTATATTGATCAATAAATACAGC.................................................................................	29	0	4	0.50	2	2	0	0	0	0
..................................................................................................................TAACTTTTGCCATCTACAGTAGAA.....................................................	24	0	4	0.50	2	2	0	0	0	0
...................................................GATTTATGGGTCAAAAGATATGTT....................................................................................................................	24	0	5	0.40	2	2	0	0	0	0
..................................................TTATTTATGGGTCAAAAGATATGTT....................................................................................................................	25	1	5	0.40	2	0	2	0	0	0
...........................................................................................................................................................TACATCGGAATGGATAATAAACAAAGGTC.......	29	0	5	0.40	2	2	0	0	0	0
.....................................................................................................................................................................TGGATAATAAACAAAGGTCTTCTAA.	25	0	5	0.40	2	2	0	0	0	0
.................................................................................TAGTGTGTATATTGATCAATAAAA......................................................................................	24	1	4	0.25	1	1	0	0	0	0
..................................................................................AGTGTGTATATTGATCAATAAATACAGC.................................................................................	28	0	4	0.25	1	1	0	0	0	0
...................................................................................................................AACTTTTGCCATCTACAGTAGAA.....................................................	23	0	4	0.25	1	1	0	0	0	0
................................................................................................................................TACGGTAGAAGGTGGTATAGG..........................................	21	3	4	0.25	1	0	0	0	0	1
...............................................................................................................TAATAACTTTTGCCATCTACAGTAGAA.....................................................	27	0	4	0.25	1	1	0	0	0	0
.................................................................................TAGTGTGTATATTGATCAATAAATA.....................................................................................	25	0	4	0.25	1	0	0	1	0	0
..............................................................................................................................TCTACAGTAGAAGGTGTTATC............................................	21	0	4	0.25	1	0	0	1	0	0
...............................................................................................................TAATAACTTTTGCAATCTACAGTAGAAGG...................................................	29	1	4	0.25	1	1	0	0	0	0
.............................................................TCAAAAGATATGTTACGCAATAGTGT........................................................................................................	26	0	5	0.20	1	1	0	0	0	0
...............................................................................................................................................................TCGGAATGGATAATAAACAAAGGTC.......	25	0	5	0.20	1	1	0	0	0	0
..................................................TGATTTATTGGTCAAAAGATATGTT....................................................................................................................	25	1	5	0.20	1	0	1	0	0	0
................................................TCTGATTTATGGGTCAAAAGATA........................................................................................................................	23	0	5	0.20	1	1	0	0	0	0
..................................................TGATTTATGGGTCAAAAGATATGTTACG.................................................................................................................	28	0	5	0.20	1	1	0	0	0	0
............................................................................................................................................................ACATCGGAATGGGCAACAAACAAAGGT........	27	3	5	0.20	1	0	1	0	0	0
.............................................................................................................................................................CATCGGAATGGGCAACAAACAAAGGT........	26	3	5	0.20	1	0	1	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACAGTAGA......................................................	26	0	5	0.20	1	1	0	0	0	0
..................................................TGATTTATGGGTCAAAAGATATGTTACGC................................................................................................................	29	0	5	0.20	1	1	0	0	0	0
..................................................................................................................TAACTTTTGCCATCTACAGTAGA......................................................	23	0	5	0.20	1	1	0	0	0	0
.....................................................TTTATGGGTCAAAAGATATGTTACG.................................................................................................................	25	0	5	0.20	1	1	0	0	0	0
................................................................................................................AATAACTTTTGCCATCTACAGTAGA......................................................	25	0	5	0.20	1	0	1	0	0	0
...................................................GATTTATGGGTCAAAAGATATGTTA...................................................................................................................	25	0	5	0.20	1	1	0	0	0	0
..................................................TGATTTATGGGTCAAAACATATGT.....................................................................................................................	24	1	5	0.20	1	0	0	0	1	0
....................................................ATTTATGGGTCAAAAGATATGTT....................................................................................................................	23	0	5	0.20	1	1	0	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACA...........................................................	21	0	6	0.17	1	1	0	0	0	0
............................CTTTAAACATTGCAAAAATA...............................................................................................................................................	20	0	6	0.17	1	1	0	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACAGT.........................................................	23	0	6	0.17	1	1	0	0	0	0

TTTACTCGGAGCGAAAAACGTTATTTGAGAAATTTGTAACGTTTTTATAGACTAAATACCCAGTTTTCTATACAATGCGTTATCACACATATAACTAGTTATTTATGTCGCATTATTGAAAACGGTAGATGTCATCTTCCACAATAGCCTGGTGTATGTAGCCTTACCTATTATTTGTTTCCAGAAGATTA **********************************..............(((((((((.(((((....((((..(((((....))))).))))))))).)))))).)))((((((..(((((((........)))))))..)))).)).......*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M046 female body	V110 male body	M060 embryo	V056 head	V041 embryo
...................................ATAACGTTTTTATAGACTAAATACC...................................................................................................................................	25	1	5	0.40	2	2	0	0	0	0
..................................TGTAACGTTTTTATAGACTAAATACC...................................................................................................................................	26	0	5	0.40	2	2	0	0	0	0
..................................................................................CCACACATATAACTAGTTATT........................................................................................	21	1	4	0.25	1	0	0	1	0	0
....................................................................................................................................................CTGGTGTATGTAGCCTTACCTATTATT................	27	0	4	0.25	1	0	1	0	0	0
............................................................................GCGTTATCACACATATAACTAGTTAT.........................................................................................	26	0	4	0.25	1	1	0	0	0	0
.......................................................................ACAATGCGTTATCACACATATAACT...............................................................................................	25	0	5	0.20	1	1	0	0	0	0
.....................................................................ATACAATGCGTTATCACACATATAACT...............................................................................................	27	0	5	0.20	1	1	0	0	0	0
................................TTTGTAACGTTTTTATAGACTAAATACC...................................................................................................................................	28	0	5	0.20	1	1	0	0	0	0
.................................TTGTAACGTTTTTATAGACTAAATAC....................................................................................................................................	26	0	5	0.20	1	1	0	0	0	0
..........................................TTTTCTAGACTAAATGCCCAA................................................................................................................................	21	3	8	0.13	1	0	0	0	1	0
...........................................................................................................................................CACAACAGCCTGGGGTATTT................................	20	3	10	0.10	1	0	0	0	0	1
TTTCCTCGGATCGAAAAGC............................................................................................................................................................................	19	3	20	0.05	1	0	1	0	0	0

Species	Coordinate	ID	Alignment
droMoj3	scaffold_6461:1145-1335 -	dmo_272	AAATGAGCCTCGCTTTTTGCAATAAACTCTTTAAACATTGCAAAAATATCTGATTTATGGGTCAAAAGATATGTTACGCAATAGTGTGTATATTGATCAATAAATACAGCGTAATAACTTTTGCCATCTACAGTAGAAG-GTG-TTATCGGACCACAT-ACATCGGAATGGATAATAAACAAAGGTCTTCTAAT
droVir3	scaffold_13049:25139563-25139753 +		AAATGTGACTCGCTCTTTGCCACATAATCTTTAAAAAATGAAAACACATCAGATTTATAGGTTATCAAATAGCTTACACAATAATGTCTATATTGTTCGACAAAGACTACATCATAGTTTTCACCATGAATTCAAGTAG-GTG-GTATTGGACCATAA-ACATCCGAATGAACCATAAATAAAGGTCTCTTGAC
droGri2	scaffold_9048:8352-8525 +		AAGTGAGCTTCGCC-TTTGCAATAAAATCATGAAAAGTAGTAA-----------------GGTAAGTAGTAGGTCACACAATTATGTGTATATTGATTGATAATCA-AACATAATAACTTTTATTGTAAATTGTAGTAGTCTGATAATACGACCACAAAATATCCGAATTGACAACAAACAAAGG-CTTTTAAT
droWil2	scf2_1100000004949:1299409-1299599 -		AAGTGCGCTTCACTTTTTGCCACAAAGTCTTTAAACATTATAAATACATCTGATTTATGTTTTATTAGGTAAGTAACACAATAATGTGTAAACTGATCTACAAAAACTACATAGTAATTTTTATCATCAATAGTTGTGG-GTG-TAATCGGACCGCAG-ACATCAGAATGTATAACAAAAAGTGCTCTACTTAT
dp5	Unknown_group_210:12885-13075 -		AAATGAGCCTCGCTCTTTGCTACAAAATCTTTAAATACATTGAATACATCTGATTTATATTTTAACAAATAGGTTACACAATAATGTGTAAATTGATCTACGAAGATCACAAAATAATTTTTATCGTCTAGTGTAACTG-GTT-TAATGGGGCCACAT-ACATCTGAATGTATTACAAACAAGGGTCGTTTTAT
droPer2	scaffold_3353:2096-2285 -		AAATGAGCCTCGCTCTTTGCTACAAAATCTTTAA-TACATTGAATACATCTGATTTATATTTTAACAAATAGGTTACACAATAATGTGTAAATTGATCTACGAAGATCACAAAATAATTTTTATCGTCTAGTGTAACTG-GTT-TAATGGGGCCACAT-ACATCTGAATGTATTACAAACAAGGGTCGTTTTAT
droAna3	scaffold_13082:3618852-3619042 +		AAGTGAGCCTCGCTCTTCGCTACAAAGTCCTTGAAACAGAAAAACACATCCGACTTATAAGTTATTAAATAGGTTACACAGTAATGTGTATACTGATCAATAAAAACTGCATAGTAGTTTTTGTTATCAATGGTAGTGG-GTG-TTATTGGGCCACAA-ACATCGGAATGGACAACAAACAAAGGTCGTGTAAT
droBip1	scf7180000395668:8046-8236 +		AAATGGGCCTCACTTTTTGCTACAAAATCTTTAAACATATTAAATACGTCTGATTTGTTTTTCATTAAATATGTTACACAATAGTGTGTATATTGATCGACAAAAATTACATAATAATTTTTATCATCAATTGTAGTCG-GTG-TTATTGGACCACAC-ACATCCGAATGAACTACAAACAGTGGTCTCTTAAT
droKik1	scf7180000301524:2848-3037 +		AAATGATTTTCACTTTTTGCAACAAAATCCTTAAAAAA-TAAAACACATTAGATTTATGTGACATTAAATATGTAACAGAATAATGAGTAAACTGATCAATAAATACAACATAATAGTTTTTACCATCTATTGTTGATG-GTG-TAATTGGACCACAA-ACGTCAGAGTGTATTATAAACAAAGGTCTTTTAAT
droFic1	scf7180000453127:13698-13888 -		AAATGAGCTTCACTCTTTGCGATGAAATCTTTAAAGAAATGAAATACTTCAGATTTGTAAGTCATTAAATAAGTTACACAATAATGTGTGTATTGATCGACAAATACAACATAATAGTTTCTGCCATCAACACTAGAAG-GAG-TTATCGGACCACAA-ACATCGGAATGAATTATAAATAAAGGCCTTTTAAT
droEle1	scf7180000490744:2842-3032 -		AAATGCGCCTCACTTTTTGCTACAAAATCCTTAAGCATTGCAAAAATATCTGATTTGTATTTCATTAAATACGTTACACAATAATGTGTATATTGATCTACAAATATAACATAATAATTTTTGTCGTCAATTGAAACAG-GTG-TTATTGGCCCGCAT-ACATCAGAGTGGATTACAAATAGGGGTCTATTTAT
droRho1	scf7180000777570:12838-13028 -		AAATGCGCCTCACTTTTCGCTACGAAATCCTTAAACACTGCAAAAACATCTGATTTATGTTTCATTAAATATGTTACACAATAATGTGTATATTGATCCACAAAAAAAACATAGTAATTTTTGTCGTCAATCGAAACAG-GTG-TTATTGGCCCGCAT-ACATCAGAATGGATTACAAATAGGGGTCTACTTAT
droBia1	scf7180000301842:9290-9480 -		AAATGCGCCTTACATTTCGCTACAAAATCCTTAAACATTGCAAAAACATCTGATTTATGTTTAATTAAATACGTTACACAATAATGTGTATATTGATCCAGAAAAATAACATAGTAATTTTTGTCGTCAATTAAAACAG-GTG-TTATTGGCCTGCAT-ACATCAAAATGGATAACAAATAGAGGTCTACTTAT
droTak1	scf7180000412579:4061-4251 +		AAATGAGCTTCACTTTTTGCGATGAAATCTTTGAAGAAATGAAATACTTCCGATTTATAAGTCATCAAATAAGTTACACAGTAATGTGTATATTGATCGACAAAGATAACATAATAGTTTCTTTCATCAACACTAGAAG-GAG-TTATCGGACCACAA-ACATCGGAATGAATTATAAATAAAGGCCGCTTAAT
droEug1	scf7180000409411:522-711 +		AAATGATTTTCACTTTTTGCAACAAAATCCTTAAAAAA-TAAAACACATCAGATTTATGTGACATTAAATATGTAACAGAATAATGAGTAAACTGATCAATAAATACAACATAATAGTTTTTACCATCTATTGTTGCTG-GTG-TAATCGGACCACAA-ACGTCAGAGTGTATTATAAACAAAGGTCTTTTAAT
dm3	chr2R:173915-174105 +		AAATGAGCCTCACTCTTGGCGATAAAATCTATAAATACAGAGAACACATCTGATTTATATGTTATTATATATGTCACGCAGTAATGTGTGTATTCATAAATAAAAACAACGTAATAGTTTTTATTATCAGTAGTAGAGG-GTA-TGATTGGCCCACAG-ACATCAGAATGGACTACAAACAAAGGTCTCTGGAT
droSim2	node_29124:234-424 -		AAATGAGCTTCACTCTTGGCTACAAAATCTTGAAACATGCTAAACACATCAGATTTATATTTAATTAAATAAGTTACACAATAATGTGTAAACTGATCAACAAAGATCACAAAATAATTTTTATCATCTAAAGTAACTG-GAG-TAATAGGCCCACAG-ACATCTGAGTGTACTACAAAAAGTGGTCTTTTAAT
droSec2	scaffold_1296:5213-5403 +		AAATGAGCTTCACTCTTGGCTACAAAATCTTGAAACATGCTAAACACATCAGATTTATATTTAATTAAATAAGTTACACAATAATGTGTAAACTGATCAACAAAGATCACAAAATAATTTTTATCATCTAAAGTAACTG-GAG-TAATAGGCCCACAG-ACATCTGAGTGTACTACAAAAAGTGGTCTTTTAAT
droYak3	v2_chrUn_1638:1585-1775 +		AAATGAGCCTCACTCTTGGCGATAAAATCTTTATATACAGAGAAAACATCTGATTTATATTTAATTATATATGTCACACAGTAATGTGTGTATTCATCAATAAAAACAACGTAATAGTTTTTATTATCAATAGTAGAGG-GTG-TGATTGGCCCACAG-ACATCGGAATGGACTACAAACAAAGGTCTCTGGAT
droEre2	scaffold_4929:13252520-13252560 +		---------------TTTGCAATAACTTCTATAAATATTTTGCAAAGATCTGTTTT------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droMoj3

AAATGAGCCTCGCTTTTTGCAATAAACTCTTTAAACATTGCAAAAATATCTGATTTATGGGTCAAAAGATATGTTACGCAATAGTGTGTATATTGATCAATAAATACAGCGTAATAACTTTTGCCATCTACAGTAGAAG-GTG-TTATCGGACCACAT-ACATCGGAATGGATAATAAACAAAGGTCTTCTAAT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..................................................TGATTTATGGGTCAAAAGATATGTT.......................................................................................................................	25	5	8.00	40	32	0	0	0	4	4
..................................................TGATTTATGGGTCAAAAGATATGTTA......................................................................................................................	26	5	3.20	16	15	0	0	0	0	1
..................................................TGATTTATGGGTCAAAAGATATGT........................................................................................................................	24	5	1.60	8	6	1	0	0	1	0
..................................................................................................................TAACTTTTGCCATCTACAGTAGAAG-G.....................................................	26	4	1.00	4	4	0	0	0	0	0
..................................................TGATTTATGGGTCAAAAGATATG.........................................................................................................................	23	5	0.80	4	3	1	0	0	0	0
..................................................................................................................TAACTTTTGCCATCTACAGTAGAAG-......................................................	25	4	0.75	3	3	0	0	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACAGTAG..........................................................	25	6	0.67	4	3	1	0	0	0	0
.................................................................................TAGTGTGTATATTGATCAATAAATACAGC....................................................................................	29	4	0.50	2	2	0	0	0	0	0
..................................................................................................................TAACTTTTGCCATCTACAGTAGAA........................................................	24	4	0.50	2	2	0	0	0	0	0
...................................................GATTTATGGGTCAAAAGATATGTT.......................................................................................................................	24	5	0.40	2	2	0	0	0	0	0
.............................................................................................................................................................T-ACATCGGAATGGATAATAAACAAAGGTC.......	29	5	0.40	2	2	0	0	0	0	0
........................................................................................................................................................................TGGATAATAAACAAAGGTCTTCTAA.	25	5	0.40	2	2	0	0	0	0	0
.................................................................................TAGTGTGTATATTGATCAATAAAA.........................................................................................	24	4	0.25	1	1	0	0	0	0	0
..................................................................................AGTGTGTATATTGATCAATAAATACAGC....................................................................................	28	4	0.25	1	1	0	0	0	0	0
...................................................................................................................AACTTTTGCCATCTACAGTAGAA........................................................	23	4	0.25	1	1	0	0	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACAGTAGAA........................................................	27	4	0.25	1	1	0	0	0	0	0
.................................................................................TAGTGTGTATATTGATCAATAAATA........................................................................................	25	4	0.25	1	0	0	0	0	0	1
..............................................................................................................................TCTACAGTAGAAG-GTG-TTATC.............................................	21	4	0.25	1	0	0	0	0	0	1
.............................................................TCAAAAGATATGTTACGCAATAGTGT...........................................................................................................	26	5	0.20	1	1	0	0	0	0	0
..................................................................................................................................................................TCGGAATGGATAATAAACAAAGGTC.......	25	5	0.20	1	1	0	0	0	0	0
................................................TCTGATTTATGGGTCAAAAGATA...........................................................................................................................	23	5	0.20	1	1	0	0	0	0	0
..................................................TGATTTATGGGTCAAAAGATATGTTACG....................................................................................................................	28	5	0.20	1	1	0	0	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACAGTAGA.........................................................	26	5	0.20	1	1	0	0	0	0	0
..................................................TGATTTATGGGTCAAAAGATATGTTACGC...................................................................................................................	29	5	0.20	1	1	0	0	0	0	0
..................................................................................................................TAACTTTTGCCATCTACAGTAGA.........................................................	23	5	0.20	1	1	0	0	0	0	0
.....................................................TTTATGGGTCAAAAGATATGTTACG....................................................................................................................	25	5	0.20	1	1	0	0	0	0	0
................................................................................................................AATAACTTTTGCCATCTACAGTAGA.........................................................	25	5	0.20	1	0	0	0	0	1	0
...................................................GATTTATGGGTCAAAAGATATGTTA......................................................................................................................	25	5	0.20	1	1	0	0	0	0	0
....................................................ATTTATGGGTCAAAAGATATGTT.......................................................................................................................	23	5	0.20	1	1	0	0	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACA..............................................................	21	6	0.17	1	1	0	0	0	0	0
............................CTTTAAACATTGCAAAAATA..................................................................................................................................................	20	6	0.17	1	1	0	0	0	0	0
...............................................................................................................TAATAACTTTTGCCATCTACAGT............................................................	23	6	0.17	1	1	0	0	0	0	0

droVir3

AAATGTGACTCGCTCTTTGCCACATAATCTTTAAAAAATGAAAACACATCAGATTTATAGGTTATCAAATAGCTTACACAATAATGTCTATATTGTTCGACAAAGACTACATCATAGTTTTCACCATGAATTCAAGTAG-GTG-GTATTGGACCATAA-ACATCCGAATGAACCATAAATAAAGGTCTCTTGAC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTC.......	25	5	1085.60	5428	0	0	216	6	35	13	21	3	2	0	2	0	12	4	0	3	0	0	0	1	59	0	0	98	478	362	720	12	666	343	100	15	681	16	222	824	12	412	57	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCTCT....	28	5	214.40	1072	0	0	36	1	1	0	3	2	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	86	104	236	5	125	65	28	3	120	0	76	115	3	51	5	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTATCAAA.............................................................................................................................	28	3	139.00	417	0	0	4	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	35	26	107	0	92	28	12	0	51	0	27	15	0	15	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCT......	26	5	40.80	204	1	0	8	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	15	34	2	41	12	4	1	26	0	12	22	0	7	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGGTC.......	26	5	40.00	200	0	0	7	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	1	1	4	8	103	3	1	0	27	3	0	2	0	31	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAATAGCT........................................................................................................................	27	3	37.33	112	0	0	7	0	2	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	7	41	0	2	0	26	1	1	0	0	19	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCTC.....	27	5	26.60	133	0	0	24	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	7	19	0	15	5	5	0	14	0	7	22	0	6	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTATC................................................................................................................................	25	3	25.67	77	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	5	15	0	20	9	2	0	4	1	8	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAATAGC.........................................................................................................................	26	3	24.67	74	0	0	8	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	23	1	1	0	22	0	0	1	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTATCA...............................................................................................................................	26	3	22.33	67	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	8	11	0	8	5	2	0	7	0	5	3	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TACATCATAGTTTTCACCATGAATTCAAG..........................................................	29	3	19.67	59	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	11	0	11	0	1	0	4	0	1	6	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGGT........	25	5	19.60	98	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	37	4	3	1	18	0	0	0	1	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TACATCATAGTTTTCACCATGAATT..............................................................	25	3	15.67	47	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	11	0	12	4	0	0	6	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTATCAA..............................................................................................................................	27	3	14.67	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	13	0	9	4	3	0	1	0	4	3	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTGTTCGAC.............................................................................................	28	3	14.67	44	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	7	0	4	4	1	0	4	0	5	5	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCTTACACAATAATGTCTATATTGT..................................................................................................	27	3	12.67	38	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	10	0	5	5	0	0	6	0	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGAAAACACATCAGATTTATAGGT....................................................................................................................................	24	3	11.67	35	0	0	0	0	0	0	3	0	0	0	0	0	1	1	0	0	0	0	0	0	2	0	0	3	2	4	4	0	4	1	0	0	3	0	1	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAATAG..........................................................................................................................	25	3	11.33	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	20	0	1	0	9	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTT...................................................................................................................................	22	3	10.33	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	3	5	0	5	5	1	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGT....................................................................................................................................	21	3	9.33	28	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	2	1	2	0	7	3	2	0	0	0	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGG.........	23	5	9.20	46	0	0	36	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTGTT.................................................................................................	24	3	9.00	27	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	6	0	2	1	0	0	4	0	3	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................CGAATGAACCATAAATAAAGGTC.......	23	5	8.80	44	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	7	4	7	0	2	4	1	0	2	0	0	8	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTGT..................................................................................................	23	3	8.33	25	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	4	0	1	0	0	0	1	0	1	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGT........	24	5	8.20	41	0	0	14	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	0	3	4	1	1	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTGTTCGA..............................................................................................	27	3	7.33	22	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	6	0	4	1	0	0	1	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................TCAGATTTATAGGTTATCAAATAGCT........................................................................................................................	26	3	6.67	20	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	6	0	1	2	2	1	1	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTA..................................................................................................................................	23	3	6.00	18	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	3	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGAAAACACATCAGATTTATAGGTT...................................................................................................................................	25	3	5.67	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	5	2	0	0	5	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTAT.................................................................................................................................	24	3	5.67	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	2	7	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAG..........	23	5	5.40	27	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	1	0	0	1	0	7	0	0	0	0	0	0	1	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGG.........	24	5	5.40	27	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	1	0	5	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
...........................................ACACATCAGATTTATAGGTTATCAAA.............................................................................................................................	26	3	4.33	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	2	3	0	0	1	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TACATCATAGTTTTCACCATGAAT...............................................................	24	3	4.33	13	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	4	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CCGAATGAACCATAAATAAAGGTC.......	24	5	4.20	21	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................ACATCCGAATGAACCATAAATAAAGGTC.......	28	5	3.80	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	2	4	2	1	0	2	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAG......................................................................................................................................	19	4	3.75	15	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	4	0	1	1	1	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................CGAATGAACCATAAATAAAGGTCTCT....	26	5	3.40	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	0	0	3	0	0	3	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGG.....................................................................................................................................	20	3	2.67	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	2	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AACACATCAGATTTATAGGTTATCAAA.............................................................................................................................	27	3	2.67	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	5	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TCAAGTAG-GTG-GTATTGGACCATAA-ACA................................	28	3	2.67	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGAAAACACATCAGATTTATAGGTTA..................................................................................................................................	26	3	2.67	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................ATGAAAACACATCAGATTTATAGGT....................................................................................................................................	25	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................TCGACAAAGACTACATCATAGTTT..........................................................................	24	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TACATCATAGTTTTCACCATGAATTCAA...........................................................	28	3	2.33	7	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAAT............................................................................................................................	23	3	2.33	7	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTGTTC................................................................................................	25	3	2.33	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGGTCT......	27	5	2.20	11	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TCAAGTAG-GTG-GTATTGGAC.........................................	20	3	2.00	6	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGAAAACACATCAGATTTATAGGTTAT.................................................................................................................................	27	3	2.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAA...........	21	5	2.00	10	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	3	0	0	0	0	0	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAG..........	22	5	2.00	10	0	0	1	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAATAGCC........................................................................................................................	27	3	2.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCAT...................................................................	23	2	2.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCATGAATT..............................................................	28	2	2.00	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTGTTCG...............................................................................................	26	3	2.00	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCTTACACAATAATGTCTATATTG...................................................................................................	26	3	1.67	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTATCC...............................................................................................................................	26	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAATA...........................................................................................................................	24	3	1.67	5	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAATAGCTT.......................................................................................................................	28	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.............................................ACATCAGATTTATAGGTTATCAAA.............................................................................................................................	24	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TCAAGTAG-GTG-GTATTGGACCATAA-AC.................................	27	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................ACATCAGATTTATAGGTTAT.................................................................................................................................	20	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................CAGATTTATAGGTTATCAAA.............................................................................................................................	20	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................ATAGCTTACACAATAATGTCTATATTGT..................................................................................................	28	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TATTGTTCGACAAAGACTACATCATAGT............................................................................	28	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCATGA.................................................................	25	2	1.50	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................ATGAAAACACATCAGATTTATAGGTTA..................................................................................................................................	27	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCATGAAT...............................................................	27	2	1.50	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TCTTTGCCACATAATCTTTAAAAAAT...........................................................................................................................................................	26	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CCGAATGAACCATAAATAAAGGTCTCT....	27	5	1.40	7	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTT.......	25	5	1.40	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAA............	20	5	1.40	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCTA.....	27	5	1.40	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCTTACACAATAATGTCTATATTGTT.................................................................................................	28	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................TTCAAGTAG-GTG-GTATTGGACCATAA-...................................	26	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ACACATCAGATTTATAGGTTATCA...............................................................................................................................	24	3	1.33	4	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCTTACACAATAATGTCTATATTGTC.................................................................................................	28	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AA-ACATCCGAATGAACCATAAATAAAGG.........	28	5	1.20	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCC......	26	5	1.20	6	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GAACCATAAATAAAGGTC.......	18	5	1.20	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTA.......	25	5	1.20	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATC................................................................................................................................	19	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................ACATCATAGTTTTCACCATGAATTCAAG..........................................................	28	3	1.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................TTTATAGGTTATCAAATAGC.........................................................................................................................	20	4	1.00	4	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATT....................................................................................................	21	3	1.00	3	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTATCCCC.............................................................................................................................	28	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TCTTTGCCACATAATCTTTAAAAAA............................................................................................................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GTTCGACAAAGACTACATCATAGTT...........................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TCTTTGCCACATAATCTTTAAAAAATG..........................................................................................................................................................	27	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................TATATTGTTCGACAAAGACTACATCA................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..ATGTGACTCGCTCTTTGC..............................................................................................................................................................................	18	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCATG..................................................................	24	2	1.00	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAA..............................................................................................................................	21	3	1.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTCTATATTGTTCGA..............................................................................................	26	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTATCCC..............................................................................................................................	27	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................AGATTTATAGGTTATCAAATAGCT........................................................................................................................	24	3	1.00	3	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTCGACAAAGACTACATCATAGTTT..........................................................................	27	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TCTTTGCCACATAATCTTTAAAAAATGA.........................................................................................................................................................	28	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ACACATCAGATTTATAGGTTATCAA..............................................................................................................................	25	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAATAGCTC.......................................................................................................................	28	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTGTTCGACA............................................................................................	29	3	1.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GAATGAACCATAAATAAAGGTCTCT....	25	5	1.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATA.............	19	5	1.00	5	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CACATCAGATTTATAGGTTATCAAA.............................................................................................................................	25	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................CTACATCATAGTTTTCACCATGAAT...............................................................	25	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TATTGTTCGACAAAGACTACATCAT...............................................................................	25	2	1.00	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................TTCGACAAAGACTACATCATAGTTT..........................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................CAGATTTATAGGTTATCAAATAGCT........................................................................................................................	25	3	1.00	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................A-ACATCCGAATGAACCATAAATAAAGG.........	27	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CCGAATGAACCATAAATAAAGGTCTC.....	26	5	0.80	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATA.............	20	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAA............	21	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................AA-ACATCCGAATGAACCATAAATAAAG..........	27	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................ACCATAAATAAAGGTCTCT....	19	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCAAA....	28	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GAATGAACCATAAATAAAGGTC.......	22	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGGTCA......	27	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATA.......................................................................................................................................	18	7	0.71	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................AATTCAAGTAG-GTG-GTATTGG...........................................	21	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TACATCATAGTTTTCACCATGAATTC.............................................................	26	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTCTATATTGTTCGACAA...........................................................................................	29	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTC...................................................................................................................................	22	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................TCAGATTTATAGGTTATCAAATAGC.........................................................................................................................	25	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AACACATCAGATTTATAGGTTATCA...............................................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................CAAGTAG-GTG-GTATTGGACCATAA-ACA................................	27	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTG...................................................................................................	22	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATCAGATTTATAGGTTATCAAA.............................................................................................................................	22	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGAAAACACATCAGATTTATAGGTTATC................................................................................................................................	28	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................CTTACACAATAATGTCTATATTGTT.................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................TTCAAGTAG-GTG-GTATTGGAC.........................................	21	3	0.67	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCTTACACAATAATGTCTATA......................................................................................................	23	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ACACATCAGATTTATAGGTTATC................................................................................................................................	23	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................TTCAAGTAG-GTG-GTATTGGACCG.......................................	23	3	0.67	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TCAAGTAG-GTG-GTATTGGACCATAA-...................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................AATTCAAGTAG-GTG-GTATTGGACCATA.....................................	27	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................ATGAATTCAAGTAG-GTG-GTATTGGA..........................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCTTACACAATAATGTCTATATT....................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................CATCAGATTTATAGGTTATCAAATAG..........................................................................................................................	26	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................ACATCAGATTTATAGGTTA..................................................................................................................................	19	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................GCTTACACAATAATGTCTATATTGT..................................................................................................	25	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................AGATTTATAGGTTATCAAA.............................................................................................................................	19	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GAAAACACATCAGATTTATAGGTTATC................................................................................................................................	27	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AACACATCAGATTTATAGGTTATCAAAT............................................................................................................................	28	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................TGAATTCAAGTAG-GTG-GTATTGGACCAT......................................	28	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................ATGAATTCAAGTAG-GTG-GTATTGGACCAT......................................	29	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AACACATCAGATTTATAGGTTAT.................................................................................................................................	23	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATA......................................................................................................	19	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................AATTCAAGTAG-GTG-GTATTGGAC.........................................	23	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AA-ACATCCGAATGAACCATAAATA.............	24	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAA...........	22	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CCGAATGAACCATAAATAAAGG.........	22	5	0.60	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCTCC....	28	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ATAA-ACATCCGAATGAACCATAAATA.............	26	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCA......	26	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................ATATTGTTCGACAAAGACTACATCATAG.............................................................................	28	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............TTTGCCACATAATCTTTAAAAAATG..........................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................CAAAGACTACATCATAGTTTTCACCATG..................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCATGAATTC.............................................................	29	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTCGACAAAGACTACATCATAGT............................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................TGCCACATAATCTTTAAAAAATGAAA.......................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AAAATGAAAACACATCAGATTTATAGGT....................................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GTTCGACAAAGACTACATCATAGTC...........................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TTGTTCGACAAAGACTACATCATAGT............................................................................	26	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................TGCCACATAATCTTTAAAAAATGAAAACA....................................................................................................................................................	29	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AATGTGACTCGCTCTTTGCCA............................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TATTGTTCGACAAAGACTACATC.................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TGTGACTCGCTCTTTGCCACATAATC.....................................................................................................................................................................	26	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................ATTGTTCGACAAAGACTACATCATAGT............................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCATGAATC..............................................................	28	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCATGT.................................................................	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TTGTTCGACAAAGACTACATCACCA.............................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................ATAATGTCTATATTGTTCGACAAAGACT......................................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................CTATATTGTTCGACAAAGACTACA...................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CCACATAATCTTTAAAAAATGAAA.......................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCATT..................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............TTTGCCACATAATCTTTAAAAAATGAAC.......................................................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................CGACAAAGACTACATCATAGTTTTCACC.....................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTCGACAAAGACTACATCATAG.............................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................ATTGTTCGACAAAGACTACATCATAG.............................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................AATGAAAACACATCAGATTTATAGGT....................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................TGCCACATAATCTTTAAAAAATGA.........................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................GACTACATCATAGTTTTCACCA....................................................................	22	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................TATATTGTTCGACAAAGACTACATCAT...............................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TCTATATTGTTCGACAAAGACTACA...................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................TCGACAAAGACTACATCATAGTTTTCA.......................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TCTATATTGTTCGACAAAGACTACATCAC...............................................................................	29	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGGTA.......	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................ATAA-ACATCCGAATGAACCATAAAT..............	25	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTG.......	25	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCAA.....	27	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................TAA-ACATCCGAATGAACCATAAATAA............	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGGTCTA.....	28	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................TAA-ACATCCGAATGAACCATAAATA.............	25	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCTT.....	27	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................ATGAACCATAAATAAAGGTC.......	20	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TGAACCATAAATAAAGGTC.......	19	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................A-ACATCCGAATGAACCATAAATAAAG..........	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGT.........	24	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................A-ACATCCGAATGAACCATAAATAAAGGT........	28	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCCGAATGAACCATAAATAAAGGTT.......	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCCGAATGAACCATAAATAAAGGTCTCTT...	29	5	0.40	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ACCATGAATTCAAGTAG-GTG-G.................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ACACATCAGATTTATAGGT....................................................................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................AAAACACATCAGATTTATAGGTTATC................................................................................................................................	26	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................ATGTCTATATTGTTCGACA............................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CACATCAGATTTATAGGTTAT.................................................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................CAATAATGTCTATATTGT..................................................................................................	18	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................ATTCAAGTAG-GTG-GTATTGGACCA.......................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ACCATGAATTCAAGTAG-GTG-GTATTG............................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................AAAACACATCAGATTTATAGGTTATCA...............................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................AATTCAAGTAG-GTG-GTATTGGACCATAA-...................................	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTGTC.................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AACACATCAGATTTATAGGTTATC................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACACATCAGATTTATAGGTTAA.................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................AATTCAAGTAG-GTG-GTATTGGATG........................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TTACACAATAATGTCTATATTC...................................................................................................	22	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droGri2

AAGTGAGCTTCGCC-TTTGCAATAAAATCATGAAAAGTAGTAA-----------------GGTAAGTAGTAGGTCACACAATTATGTGTATATTGATTGATAATCA-AACATAATAACTTTTATTGTAAATTGTAGTAGTCTGATAATACGACCACAAAATATCCGAATTGACAACAAACAAAGG-CTTTTAAT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

AAGTGCGCTTCACTTTTTGCCACAAAGTCTTTAAACATTATAAATACATCTGATTTATGTTTTATTAGGTAAGTAACACAATAATGTGTAAACTGATCTACAAAAACTACATAGTAATTTTTATCATCAATAGTTGTGG-GTG-TAATCGGACCGCAG-ACATCAGAATGTATAACAAAAAGTGCTCTACTTAT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................................................TATTAGGTAAGTAACACAATAATGTG..........................................................................................................	26	10	1.60	16	0	2	2	12	0
.................................................................................................................................................................ATCAGAATGTATAACAAAAAGTGCTC.......	26	11	1.00	11	0	4	0	7	0
.................................................................TAGGTAAGTAACACAATAATGTGTA........................................................................................................	25	10	1.00	10	0	0	0	10	0
..................................................................................................................................................................TCAGAATGTATAACAAAAAGTGCTC.......	25	11	1.00	11	0	9	0	2	0
...................................................................................................................................................................CAGAATGTATAACAAAAAGTGCTCTACT...	28	11	0.91	10	0	7	0	3	0
.............................................................................................................................................TG-TAATCGGACCGCAG-ACATCAGAATG........................	27	13	0.77	10	0	1	0	9	0
.........................................................................................................................................................CGCAG-ACATCAGAATGTATAACAAAAAG............	28	12	0.67	8	0	4	0	4	0
........................................TAAATACATCTGATTTATGTTTTAT.................................................................................................................................	25	3	0.67	2	0	2	0	0	0
........................................................................................TAAACTGATCTACAAAAACTACATAG................................................................................	26	5	0.60	3	0	3	0	0	0
................................................................................................................................................TAATCGGACCGCAG-ACATCAGAATG........................	25	13	0.46	6	2	3	0	1	0
......................................................................................................................TTTTATCATCAATAGTTGTGG-GT....................................................	23	15	0.40	6	0	0	0	6	0
...............................TAAACATTATAAATACATCTGATT...........................................................................................................................................	24	3	0.33	1	0	1	0	0	0
.............................................................................................................................................TG-TAATCGGACCGCAG-ACATCAGAAT.........................	26	13	0.31	4	0	2	0	2	0
..............................................................TATTAGGTAAGTAACACAATAATGTGTA........................................................................................................	28	10	0.30	3	0	0	0	3	0
........................................................................................................................................TGG-GTG-TAATCGGACCGCAG-ACATC..............................	25	14	0.29	4	0	1	0	3	0
..................................................................................................................................................................TCAGAATGTATAACAAAAAGTGCTCTACT...	29	11	0.27	3	0	3	0	0	0
......................................................................................................................TTTTATCATCAATAGTTGTGG-GTG-T.................................................	25	15	0.27	4	0	0	0	4	0
.............................................................................................................................................................G-ACATCAGAATGTATAACAAAAAGTGC.........	27	12	0.25	3	0	2	0	1	0
.............................................................................................................................................TG-TAATCGGACCGCAG-ACATCAGAA..........................	25	13	0.23	3	0	0	0	3	0
................................................................................................................................................TAATCGGACCGCAG-ACATCAGAATGTA......................	27	13	0.23	3	0	2	0	1	0
..................................................................................................................TAATTTTTATCATCAATAGTTGTGG-GT....................................................	27	14	0.21	3	0	0	0	3	0
.........................................................................................................................TATCATCAATAGTTGTGG-GTG-TAATCG............................................	27	14	0.21	3	0	2	0	1	0
..............................................................TATTAGGTAAGTAACACAATAATGTGT.........................................................................................................	27	10	0.20	2	0	2	0	0	0
.........................................................................................AAACTGATCTACAAAAACTACATAGTAAT............................................................................	29	5	0.20	1	0	1	0	0	0
......................................................................................................................TTTTATCATCAATAGTTGTGG-GTG-..................................................	24	15	0.20	3	0	1	0	2	0
.............................................................................................TGATCTACAAAAACTACATAGTAATT...........................................................................	26	5	0.20	1	0	1	0	0	0
.................................................................TAGGTAAGTAACACAATAATGTGTAA.......................................................................................................	26	10	0.20	2	0	0	0	2	0
...................................................................................................................................................................CAGAATGTATAACAAAAAGTGCTCTAC....	27	11	0.18	2	0	2	0	0	0
...................................................................................................................................................TCGGACCGCAG-ACATCAGAATGTATAAC..................	28	12	0.17	2	0	2	0	0	0
..............................................................................................................................TCAATAGTTGTGG-GTG-TAATCGGACCG.......................................	27	13	0.15	2	0	2	0	0	0
.................................................................................................................................................AATCGGACCGCAG-ACATCAGAATG........................	24	13	0.15	2	0	2	0	0	0
..............................................................................................................................TCAATAGTTGTGG-GTG-TAATCGGA..........................................	24	13	0.15	2	0	0	0	2	0
..............................................................................................................................TCAATAGTTGTGG-GTG-TAATCGGACC........................................	26	13	0.15	2	0	1	0	1	0
..............................................................................................................................TCAATAGTTGTGG-GTG-TAATCGGAC.........................................	25	13	0.15	2	0	0	0	2	0
........................................................................................................................................TGG-GTG-TAATCGGACCGCAG-ACATCA.............................	26	14	0.14	2	0	2	0	0	0
........................................................................................................................................TGG-GTG-TAATCGGACCGCAG-ACA................................	23	14	0.14	2	0	1	1	0	0
...........................................................................................................................TCATCAATAGTTGTGG-GTG-TAATCG............................................	25	14	0.14	2	0	1	0	1	0
.......................................................................................................................TTTATCATCAATAGTTGTGG-GTG-TA................................................	25	15	0.13	2	0	0	0	2	0
...TGCGCTTCACTTTTTGCCACAAAGTC.....................................................................................................................................................................	26	8	0.13	1	0	1	0	0	0
.................................................................TAGGTAAGTAACACAATAATGTGTAAAC.....................................................................................................	28	10	0.10	1	0	0	0	1	0
.................................................................TAGGTAAGTAACACAATAATGTGTAAA......................................................................................................	27	10	0.10	1	0	0	0	1	0
......................................................................................................................................................................AATGTATAACAAAAAGTGCTC.......	21	11	0.09	1	0	1	0	0	0
..............................................................TATTAGGTAAGTAACACAATAATGT...........................................................................................................	25	11	0.09	1	0	0	0	1	0
.............................................................................................................................................................G-ACATCAGAATGTATAACAAAAAGTGCTC.......	29	11	0.09	1	0	1	0	0	0
.....................................................................................................................................................................GAATGTATAACAAAAAGTGCTC.......	22	11	0.09	1	0	1	0	0	0
..........................................................................AACACAATAATGTGTAAACTGATC................................................................................................	24	11	0.09	1	0	1	0	0	0
...................................................................................................................................................................CAGAATGTATAACAAAAAGTGCTCTACTT..	29	11	0.09	1	0	1	0	0	0
.................................................................................................................................................................ATCAGAATGTATAACAAAAAGTGCTCT......	27	11	0.09	1	0	1	0	0	0
....................................................................................................................................................................AGAATGTATAACAAAAAGTGCTCTACT...	27	11	0.09	1	0	1	0	0	0
................................................................................................................................................................CATCAGAATGTATAACAAAAAGTGCT........	26	11	0.09	1	0	0	0	1	0
...........................................................................................................................................................................ATAACAAAAAGTGCTCTAC....	19	11	0.09	1	0	1	0	0	0
...............................................................ATTAGGTAAGTAACACAATAATGT...........................................................................................................	24	11	0.09	1	0	1	0	0	0
...................................................................................................................................................................CAGAATGTATAACAAAAAGTGCTC.......	24	11	0.09	1	0	1	0	0	0
.................................................................................................................................................................ATCAGAATGTATAACAAAAAGTGCT........	25	11	0.09	1	0	0	0	1	0
......................................................................................................................................................GACCGCAG-ACATCAGAATGTATAACA.................	26	12	0.08	1	0	1	0	0	0
.........................................................................................................................................................CGCAG-ACATCAGAATGTATAACAAAAAGA...........	29	12	0.08	1	0	1	0	0	0
.........................................................................................................................................................CGCAG-ACATCAGAATGTATAACAAAAA.............	27	12	0.08	1	0	0	0	1	0
.......................................................TATGTTTTATTAGGTAAGTAACAC...................................................................................................................	24	12	0.08	1	0	0	0	1	0
...............................................................................................................TAGTAATTTTTATCATCAATAGTTG..........................................................	25	13	0.08	1	0	0	0	1	0
..................................................................................................................................TAGTTGTGG-GTG-TAATCGGACCGCAG-...................................	26	13	0.08	1	0	1	0	0	0
...............................................................................................................................CAATAGTTGTGG-GTG-TAATCGGACC........................................	25	13	0.08	1	0	0	0	1	0
.............................................................................................................................ATCAATAGTTGTGG-GTG-TAATCGGAC.........................................	26	13	0.08	1	0	1	0	0	0
..................................................................................................................................TAGTTGTGG-GTG-TAATCGGACCG.......................................	23	13	0.08	1	0	0	0	1	0
..............................................................................................................................TCAATAGTTGTGG-GTG-TAATCGGACCGC......................................	28	13	0.08	1	0	1	0	0	0
.............................................................................................................................................TG-TAATCGGACCGCAG-ACATCAGA...........................	24	13	0.08	1	0	0	0	1	0
.................................................................................................................................................AATCGGACCGCAG-ACATCAGAAT.........................	23	13	0.08	1	1	0	0	0	0
.................................................................................TAATGTGTAAACTGATCTACAAAAT........................................................................................	25	13	0.08	1	0	0	0	1	0
............................................................................................................................CATCAATAGTTGTGG-GTG-TAATCGGAC.........................................	27	13	0.08	1	0	1	0	0	0
..................................................................................................................................TAGTTGTGG-GTG-TAATCGGACCGCA.....................................	25	13	0.08	1	0	1	0	0	0
.............................................................................................................................................TG-TAATCGGACCGCAG-ACATCAGATA.........................	26	13	0.08	1	0	0	0	1	0
...............................................................................................................................CAATAGTTGTGG-GTG-TAATCGGACCG.......................................	26	13	0.08	1	0	0	0	1	0
..............................................................................................................................................G-TAATCGGACCGCAG-ACATCAGAATG........................	26	13	0.08	1	0	1	0	0	0
.................................................................................................................................................AATCGGACCGCAG-ACATCAGAATGTA......................	26	13	0.08	1	0	0	0	1	0
..............................................................................................................................TCAATAGTTGTGG-GTG-TAATCGGACTA.......................................	27	13	0.08	1	0	1	0	0	0
............................................................................................................................CATCAATAGTTGTGG-GTG-TAATCGG...........................................	25	14	0.07	1	0	1	0	0	0
......................................................................................................................................TGTGG-GTG-TAATCGGACCGCAG-ACA................................	25	14	0.07	1	0	1	0	0	0
......................................................................................................................................TGTGG-GTG-TAATCGGACCGCAG-ACAT...............................	26	14	0.07	1	0	0	0	1	0
.........................................................................................................................................GG-GTG-TAATCGGACCGCAG-A..................................	20	14	0.07	1	0	0	1	0	0
..............................................................................................................................TCAATAGTTGTGG-GTG-TAATCG............................................	22	14	0.07	1	0	1	0	0	0
.....................................................................................................................................TTGTGG-GTG-TAATCGGACCGCAG-A..................................	24	14	0.07	1	0	0	0	1	0
......................................................................................................................TTTTATCATCAATAGTTGTGG-GTG-TA................................................	26	15	0.07	1	0	0	0	1	0
..........................................................................................................................ATCATCAATAGTTGTGG-GTG-TAAT..............................................	24	15	0.07	1	0	1	0	0	0
............................................................................................................................CATCAATAGTTGTGG-GTG-TA................................................	20	15	0.07	1	0	0	0	1	0
......................................................................................................................TTTTATCATCAATAGTTGTGG-G.....................................................	22	15	0.07	1	0	0	0	1	0

dp5

AAATGAGCCTCGCTCTTTGCTACAAAATCTTTAAATACATTGAATACATCTGATTTATATTTTAACAAATAGGTTACACAATAATGTGTAAATTGATCTACGAAGATCACAAAATAATTTTTATCGTCTAGTGTAACTG-GTT-TAATGGGGCCACAT-ACATCTGAATGTATTACAAACAAGGGTCGTTTTAT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
................................................................................................................................TAGTGTAACTG-GTT-TAATGGGG..........................................	22	1	8.00	8	0	4	0	0	0	0	0	2	2	0
...................................TACATTGAATACATCTGATTTATATTT....................................................................................................................................	27	2	7.50	15	0	11	0	0	0	0	0	0	4	0
................................................................................................................................TAGTGTAACTG-GTT-TAATGGGGC.........................................	23	1	4.00	4	0	4	0	0	0	0	0	0	0	0
...............................TAAATACATTGAATACATCTGATT...........................................................................................................................................	24	2	3.50	7	0	7	0	0	0	0	0	0	0	0
.....................................................................................................................................TAACTG-GTT-TAATGGGGCCACAT-ACATC..............................	28	1	3.00	3	0	3	0	0	0	0	0	0	0	0
................................................................................................................................................TAATGGGGCCACAT-ACATCTGA...........................	22	1	3.00	3	0	0	0	0	0	0	0	0	3	0
................................................................................................................................TAGTGTAACTG-GTT-TAATGGG...........................................	21	2	3.00	6	0	3	0	0	1	0	0	0	2	0
............................................TACATCTGATTTATATTTTAACAAA.............................................................................................................................	25	2	2.00	4	0	0	0	0	0	0	0	0	4	0
.....................................................................................................................................TAACTG-GTT-TAATGGGGCCACAT-ACA................................	26	1	2.00	2	0	1	0	0	0	0	0	0	1	0
...........................................................................................................................TCGTCTAGTGTAACTG-GTT-TAATGGGG..........................................	27	1	2.00	2	0	1	0	0	0	0	1	0	0	0
................................................................................................................................TAGTGTAACTG-GTT-TAATGGGGCCA.......................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................T-TAATGGGGCCACAT-ACATCTGAATG........................	26	1	2.00	2	0	1	1	0	0	0	0	0	0	0
.............................................................................................................................................TT-TAATGGGGCCACAT-ACATCTGAATG........................	27	1	2.00	2	0	0	1	0	0	0	0	1	0	0
...................................TACATTGAATACATCTGATTTAT........................................................................................................................................	23	2	1.50	3	0	0	0	0	0	0	0	0	3	0
...................................TACATTGAATACATCTGATTTATATT.....................................................................................................................................	26	2	1.50	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TATTACAAACAAGGGTCGTTTTA.	23	2	1.50	3	0	0	0	0	0	0	0	0	3	0
................................AAATACATTGAATACATCTGA.............................................................................................................................................	21	2	1.50	3	0	0	0	0	0	0	0	3	0	0
.............................................................................................................................................................T-ACATCTGAATGTATTACAAACAAGGG.........	27	2	1.50	3	0	0	0	0	0	0	0	0	3	0
...............................TAAATACATTGAATACATCTGATTTA.........................................................................................................................................	26	2	1.50	3	0	1	0	0	0	0	0	0	2	0
.......................................TTGAATACATCTGATTTATATTT....................................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................TAATGGGGCCACAT-ACATCTGAATG........................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0
..............................................................TAACAAATAGGTTACACAATAATGT...........................................................................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................AACTG-GTT-TAATGGGGCCACAT-A..................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................TAGTGTAACTG-GTT-TAATGGGGCCACA.....................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................AACTG-GTT-TAATGGGGCCACAT-ACATC..............................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TAACTG-GTT-TAATGGGGCCACAT-ACAT...............................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCTGAATGTATTACAAACAA............	20	2	1.00	2	0	0	0	0	0	0	0	0	2	0
.................................................................................................................................AGTGTAACTG-GTT-TAATGGGGC.........................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................GTGTAACTG-GTT-TAATGGGG..........................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................TAATTTTTATCGTCTAGTGTAACTG-G.....................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	2	0
..................................................................................................................TAATTTTTATCGTCTAGTGTAACTG-GTT-..................................................	28	2	1.00	2	0	0	0	0	0	0	0	2	0	0
.............................................................................................................................................TT-TAATGGGGCCACAT-ACATCTGAA..........................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................TACGAAGATCACAAAATAATTTTTATA.....................................................................	27	2	1.00	2	0	0	0	0	0	0	0	0	2	0
................................................................................................................................................TAATGGGGCCACAT-ACATCT.............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TAACTG-GTT-TAATGGGGCCACA.....................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................TAACAAATAGGTTACACAATAATG............................................................................................................	24	2	1.00	2	0	1	0	0	0	0	0	0	1	0
.....................................................................................................................................TAACTG-GTT-TAATGGGGCCACAT-A..................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...................................................................................................................AATTTTTATCGTCTAGTGTAACTG-GTT-..................................................	27	2	1.00	2	0	1	0	0	0	0	0	0	1	0
...........................................................................................................................TCGTCTAGTGTAACTG-GTT-TAATGGGGC.........................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................AGTGTAACTG-GTT-TAATGGGG..........................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................TACATTGAATACATCTGATTTATAT......................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................ACATTGAATACATCTGATT...........................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................TGAATGTATTACAAACAAGGGTCGC.....	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0
................................................................ACAAATAGGTTACACAATAATG............................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................ACATCTGAATGTATTACAAACAAGGG.........	26	2	0.50	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................AATGTATTACAAACAAGGGTCGTT....	24	2	0.50	1	0	0	0	0	0	0	0	1	0	0
..............................TTAAATACATTGAATACATCTGAT............................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................TCACAAAATAATTTTTATCGTCTAG...............................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	1	0
...............................TAAATACATTGAATACATCTGATTT..........................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................TACGAAGATCACAAAATAATTT..........................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................TAGTGTAACTG-GTT-TAATGG............................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................TAATTTTTATCGTCTAGTGTAACTG-T.....................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................TGTATTACAAACAAGGGTCGTTTTA.	25	2	0.50	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................TCTGAATGTATTACAAACAAGGGTC.......	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................AAATACATTGAATACATCTGATT...........................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................TCTACGAAGATCACAAAATAATTTTTA.......................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCTGAATGTATTACAAACAAGGGTCG......	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................CAATAATGTGTAAATTGATCTACGA...........................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TGTGTAAATTGATCTACGAAGATCACA...................................................................................	27	2	0.50	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................TAATTTTTATCGTCTAGTGTAACTG-......................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	1	0
..............................TTAAATACATTGAATACATCTGATT...........................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................TCACAAAATAATTTTTATCGTCTAGTG.............................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	1	0
.................................................................................TAATGTGTAAATTGATCTACGAAGA........................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................TGTATTACAAACAAGGGTCGTTT...	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................TAATTTTTATCGTCTAGTGTAAC.........................................................	23	2	0.50	1	0	0	0	0	0	0	0	1	0	0
....................................ACATTGAATACATCTGATTTATATTT....................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................TCTACGAAGATCACAAAATAATTT..........................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0

droPer2

AAATGAGCCTCGCTCTTTGCTACAAAATCTTTAA-TACATTGAATACATCTGATTTATATTTTAACAAATAGGTTACACAATAATGTGTAAATTGATCTACGAAGATCACAAAATAATTTTTATCGTCTAGTGTAACTG-GTT-TAATGGGGCCACAT-ACATCTGAATGTATTACAAACAAGGGTCGTTTTAT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...........................................................................................................................TCGTCTAGTGTAACTG-GTT-TAATGG............................................	25	20	3.00	60	0	55	4	0	0	1
...........................................................................................................................TCGTCTAGTGTAACTG-GTT-TAATGGGGC.........................................	28	20	0.60	12	0	11	0	0	0	1
............................................................................................................................CGTCTAGTGTAACTG-GTT-TAATGG............................................	24	20	0.30	6	0	6	0	0	0	0
...............................................................................................................................................................ACATCTGAATGTATTACAAACAAGGG.........	26	20	0.30	6	0	6	0	0	0	0
............................................................................................................................CGTCTAGTGTAACTG-GTT-TAATGGGG..........................................	26	20	0.25	5	0	5	0	0	0	0
..................................................................................................................................................................TCTGAATGTATTACAAACAAGGGT........	24	20	0.20	4	4	0	0	0	0	0
................................................................................................................................TAGTGTAACTG-GTT-TAATGGGGCCACA.....................................	27	20	0.20	4	0	4	0	0	0	0
.........................................................................................................................TATCGTCTAGTGTAACTG-GTT-TAAT..............................................	25	20	0.20	4	0	4	0	0	0	0
.............................................................................................................................................................T-ACATCTGAATGTATTACAAACAAGGG.........	27	20	0.15	3	3	0	0	0	0	0
................................................................................................................................................................CATCTGAATGTATTACAAACAAGGG.........	25	20	0.10	2	0	2	0	0	0	0
..................................................................................................................................................................TCTGAATGTATTACAAACAAGGGTC.......	25	20	0.10	2	0	2	0	0	0	0
...........................................................................................................................TCGTCTAGTGTAACTG-GTT-TAAT..............................................	23	20	0.05	1	0	1	0	0	0	0
...........................................................................................................................TCGTCTAGTGTAACTG-GTT-TAATG.............................................	24	20	0.05	1	0	0	0	0	0	1
...........................................................................................................................TCGTCTAGTGTAACTG-GTT-TAATGGGGT.........................................	28	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................GTCTAGTGTAACTG-GTT-TAATGGGG..........................................	25	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................................................TCTGAATGTATTACAAACAAGGGTCGT.....	27	20	0.05	1	0	1	0	0	0	0
................................................................................................................................................TAATGGGGCCACAT-ACATCTGAATGT.......................	26	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................GGGGCCACAT-ACATCTGAATGTAT.....................	24	20	0.05	1	0	1	0	0	0	0
....................................................................................................................................................................TGAATGTATTACAAACAAGGGTCGTT....	26	20	0.05	1	0	1	0	0	0	0
...............................................................................................................................................................ACATCTGAATGTATTACAA................	19	20	0.05	1	0	1	0	0	0	0
...................................................................................................................................................TGGGGCCACAT-ACATCTGAATGTAT.....................	25	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................TCTGAATGTATTACAAACAAGGGTCGTTG...	29	20	0.05	1	0	1	0	0	0	0

droAna3

AAGTGAGCCTCGCTCTTCGCTACAAAGTCCTTGAAACAGAAAAACACATCCGACTTATAAGTTATTAAATAGGTTACACAGTAATGTGTATACTGATCAATAAAAACTGCATAGTAGTTTTTGTTATCAATGGTAGTGG-GTG-TTATTGGGCCACAA-ACATCGGAATGGACAACAAACAAAGGTCGTGTAAT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAATGG.......................	25	20	4.80	96	14	32	45	0	4	1
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAATG........................	24	20	1.55	31	4	14	10	0	2	1
........................................................................................................................................TGG-GTG-TTATTGGGCCACAA-ACATC..............................	25	18	1.06	19	0	15	4	0	0	0
.........................................................................................................................TGTTATCAATGGTAGTGG-GTG-TTAT..............................................	25	3	0.67	2	0	2	0	0	0	0
..............................TTGAAACAGAAAAACACATCCGACT...........................................................................................................................................	25	17	0.53	9	1	8	0	0	0	0
............................................................................................................................TATCAATGGTAGTGG-GTG-TTATTGGGC.........................................	27	18	0.50	9	3	6	0	0	0	0
............................................................................................................................TATCAATGGTAGTGG-GTG-TTATTGG...........................................	25	19	0.47	9	5	4	0	0	0	0
................................................................................................................................................TTATTGGGCCACAA-ACATCGGAATGG.......................	26	20	0.45	9	2	3	4	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TTATTGG...........................................	26	19	0.37	7	3	3	0	0	1	0
...........................TCCTTGAAACAGAAAAACACATCCGACT...........................................................................................................................................	28	17	0.35	6	0	6	0	0	0	0
...................................................................................................................................................TTGGGCCACAA-ACATCGGAATGG.......................	23	20	0.35	7	0	3	4	0	0	0
.........................................................................................................................TGTTATCAATGGTAGTGG-GTG-T.................................................	22	3	0.33	1	0	1	0	0	0	0
................................................................................................................................................TTATTGGGCCACAA-ACATCGGAATG........................	25	20	0.30	6	1	4	1	0	0	0
....................................................................................................................................................TGGGCCACAA-ACATCGGAATGG.......................	22	20	0.25	5	0	2	3	0	0	0
.................................................................................TAATGTGTATACTGATCAATAAAAAC.......................................................................................	26	12	0.25	3	1	0	2	0	0	0
........................AAGTCCTTGAAACAGAAAAACACATCC...............................................................................................................................................	27	17	0.24	4	0	4	0	0	0	0
...............................TGAAACAGAAAAACACATCCGACTTA.........................................................................................................................................	26	17	0.24	4	0	4	0	0	0	0
........................AAGTCCTTGAAACAGAAAAACACATC................................................................................................................................................	26	17	0.24	4	1	3	0	0	0	0
...TGAGCCTCGCTCTTCGCTACAAAGTCC....................................................................................................................................................................	27	19	0.21	4	2	2	0	0	0	0
.............................................................................................................................................TG-TTATTGGGCCACAA-ACATCGGAATGG.......................	28	20	0.20	4	2	1	1	0	0	0
............................................................................................................................TATCAATGGTAGTGG-GTG-TTAT..............................................	22	20	0.20	4	0	4	0	0	0	0
..................................................................................................................................................ATTGGGCCACAA-ACATCGGAATGG.......................	24	20	0.20	4	3	0	1	0	0	0
.............................................................................................................................................TG-TTATTGGGCCACAA-ACATCGGAA..........................	25	20	0.20	4	3	1	0	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TTAT..............................................	23	20	0.20	4	0	4	0	0	0	0
..............................................................................................................................TCAATGGTAGTGG-GTG-TTATTGGGCCAC......................................	28	17	0.18	3	1	2	0	0	0	0
...........................TCCTTGAAACAGAAAAACACATCCGAC............................................................................................................................................	27	17	0.18	3	0	3	0	0	0	0
..............................TTGAAACAGAAAAACACATCCGACTTA.........................................................................................................................................	27	17	0.18	3	0	3	0	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAATGGAC.....................	27	18	0.17	3	0	3	0	0	0	0
..............................................................................................................................TCAATGGTAGTGG-GTG-TTATTGGGCCA.......................................	27	18	0.17	3	1	2	0	0	0	0
...TGAGCCTCGCTCTTCGCTACAAAGTCCT...................................................................................................................................................................	28	19	0.16	3	2	1	0	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TTATT.............................................	24	20	0.15	3	0	3	0	0	0	0
....................................................................................................................................................TGGGCCACAA-ACATCGGAAT.........................	20	20	0.15	3	1	2	0	0	0	0
.............................................................................................................................................TG-TTATTGGGCCACAA-ACATCGGAATG........................	27	20	0.15	3	2	0	1	0	0	0
......................CAAAGTCCTTGAAACAGAAAAACACATC................................................................................................................................................	28	16	0.13	2	0	2	0	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAATGGACA....................	28	17	0.12	2	2	0	0	0	0	0
...............................TGAAACAGAAAAACACATCCGACT...........................................................................................................................................	24	17	0.12	2	0	1	1	0	0	0
..............................TTGAAACAGAAAAACACATCCGACC...........................................................................................................................................	25	17	0.12	2	0	2	0	0	0	0
..............................................................................................................................TCAATGGTAGTGG-GTG-TTATTGGGCC........................................	26	18	0.11	2	1	1	0	0	0	0
..................................................................................................................................TGGTAGTGG-GTG-TTATTGGGCC........................................	22	18	0.11	2	0	2	0	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TTATTGGGCC........................................	29	18	0.11	2	0	2	0	0	0	0
............................................................................................................................TATCAATGGTAGTGG-GTG-TTATTGGGCC........................................	28	18	0.11	2	1	1	0	0	0	0
..............................................................................................................................TCAATGGTAGTGG-GTG-TTATTGGGC.........................................	25	18	0.11	2	0	2	0	0	0	0
..............................................................................................................................TCAATGGTAGTGG-GTG-TTATTGG...........................................	23	19	0.11	2	0	2	0	0	0	0
..............................................................................................................................TCAATGGTAGTGG-GTG-TTATTGGG..........................................	24	19	0.11	2	1	1	0	0	0	0
...TGAGCCTCGCTCTTCGCTACAAAG.......................................................................................................................................................................	24	20	0.10	2	2	0	0	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TTATC.............................................	24	20	0.10	2	0	2	0	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAATGT.......................	25	20	0.10	2	0	0	2	0	0	0
..............................................................................................................................................G-TTATTGGGCCACAA-ACATCGGAATGG.......................	27	20	0.10	2	0	2	0	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAA..........................	22	20	0.10	2	0	2	0	0	0	0
....................................................................................TGTGTATACTGATCAATAAAA.........................................................................................	21	13	0.08	1	0	1	0	0	0	0
.........................................................................................................................................................CACAA-ACATCGGAATGGACAACAAACAAA...........	29	15	0.07	1	1	0	0	0	0	0
................................................................................................................................................................CATCGGAATGGACAACAAACAAAGG.........	25	15	0.07	1	1	0	0	0	0	0
.................................................................................................................................................................ATCGGAATGGACAACAAACAAAGG.........	24	15	0.07	1	1	0	0	0	0	0
..........................GTCCTTGAAACAGAAAAACACATCC...............................................................................................................................................	25	17	0.06	1	0	1	0	0	0	0
...........................TCCTTGAAACAGAAAAACACATCC...............................................................................................................................................	24	17	0.06	1	0	1	0	0	0	0
.......................AAAGTCCTTGAAACAGAAAAACACATCC...............................................................................................................................................	28	17	0.06	1	0	1	0	0	0	0
...............................TGAAACAGAAAAACACATCCGAC............................................................................................................................................	23	17	0.06	1	0	1	0	0	0	0
................TCGCTACAAAGTCCTTGAAACAGAAAAAC.....................................................................................................................................................	29	17	0.06	1	0	1	0	0	0	0
.....................................................................................................................................TAGTGG-GTG-TTATTGGGCCACAA-...................................	23	17	0.06	1	0	1	0	0	0	0
...................CTACAAAGTCCTTGAAACAGAAAAACACA..................................................................................................................................................	29	17	0.06	1	0	1	0	0	0	0
.....................................................................................................................................TAGTGG-GTG-TTATTGGGCCACAA-ACATC..............................	28	17	0.06	1	0	1	0	0	0	0
..........................GTCCTTGAAACAGAAAAACACATCCGACT...........................................................................................................................................	29	17	0.06	1	0	1	0	0	0	0
..........................GTCCTTGAAACAGAAAAACACATCCGAC............................................................................................................................................	28	17	0.06	1	0	1	0	0	0	0
..................................AACAGAAAAACACATCCGACT...........................................................................................................................................	21	17	0.06	1	0	1	0	0	0	0
.......................AAAGTCCTTGAAACAGAAAAACACATC................................................................................................................................................	27	17	0.06	1	0	1	0	0	0	0
.............................CTTGAAACAGAAAAACACATCCGACT...........................................................................................................................................	26	17	0.06	1	0	1	0	0	0	0
...............................................................................................................................CAATGGTAGTGG-GTG-TTATTGGGCC........................................	25	18	0.06	1	1	0	0	0	0	0
................................................................................................................................AATGGTAGTGG-GTG-TTATTGGGC.........................................	23	18	0.06	1	0	1	0	0	0	0
.....................................................................................................................................TAGTGG-GTG-TTATTGGGC.........................................	18	18	0.06	1	0	1	0	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAATGGA......................	26	18	0.06	1	0	1	0	0	0	0
........................................................................................................................................TGG-GTG-TTATTGGGCCACAA-ACATCGG............................	27	18	0.06	1	0	0	1	0	0	0
..................................................................................................................................................ATTGGGCCACAA-ACATCGGAATGGAC.....................	26	18	0.06	1	1	0	0	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TTATTGGGC.........................................	28	18	0.06	1	0	1	0	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TTATTGGG..........................................	27	19	0.05	1	0	1	0	0	0	0
.......CCTCGCTCTTCGCTACAAAGTCCTTGA................................................................................................................................................................	27	19	0.05	1	1	0	0	0	0	0
...TGAGCCTCGCTCTTCGCTACAAAGTC.....................................................................................................................................................................	26	19	0.05	1	0	1	0	0	0	0
..................................................................................................................................TGGTAGTGG-GTG-TTATTGGGG.........................................	21	19	0.05	1	0	0	1	0	0	0
.........................................................TAAGTTATTAAATAGGTTACACAGTA...............................................................................................................	26	19	0.05	1	0	1	0	0	0	0
..................................................................................................................................TGGTAGTGG-GTG-TTATTGGG..........................................	20	19	0.05	1	1	0	0	0	0	0
.....AGCCTCGCTCTTCGCTACAAAGTCCTTG.................................................................................................................................................................	28	19	0.05	1	1	0	0	0	0	0
...............TTCGCTACAAAGTCCTTGAAACAGAAA........................................................................................................................................................	27	19	0.05	1	0	1	0	0	0	0
.............................................................................................................................ATCAATGGTAGTGG-GTG-TTATTGG...........................................	24	19	0.05	1	0	0	1	0	0	0
..................................................................................................................................................ATTGGGCCACAA-ACATCGGAATG........................	23	20	0.05	1	1	0	0	0	0	0
................................................................................................................................AATGGTAGTGG-GTG-TTAT..............................................	18	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................ATCAATGGTAGTGG-GTG-TTAT..............................................	21	20	0.05	1	0	1	0	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TT................................................	21	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAATCC.......................	25	20	0.05	1	0	0	1	0	0	0
............................................................................................................................TATCAATGGTAGTGG-GTG-T.................................................	19	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................TGGGCCACAA-ACATCGGAA..........................	19	20	0.05	1	0	0	1	0	0	0
.............TCTTCGCTACAAAGTCCTTGAAACAGAA.........................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................TGGGCCACAA-ACATCGGAATGGC......................	23	20	0.05	1	0	0	1	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAATGGT......................	26	20	0.05	1	0	0	1	0	0	0
............................................................................................................................TATCAATGGTAGTGG-GTG-TTATT.............................................	23	20	0.05	1	0	1	0	0	0	0
............................................................................................................................................GTG-TTATTGGGCCACAA-ACATCGGAA..........................	26	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................TG-TTATTGGGCCACAA-ACATCGGA...........................	24	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................TCAATGGTAGTGG-GTG-TTAT..............................................	20	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................G-TTATTGGGCCACAA-ACATCGGAATG........................	26	20	0.05	1	0	1	0	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGGAAT.........................	23	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................TTATCAATGGTAGTGG-GTG-TTATTT............................................	25	20	0.05	1	0	0	1	0	0	0
.................................................................................................................................................TATTGGGCCACAA-ACATCGG............................	20	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................G-TTATTGGGCCACAA-ACATCGGA...........................	23	20	0.05	1	1	0	0	0	0	0
.............TCTTCGCTACAAAGTCCTTGAAACA............................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................TTGGGCCACAA-ACATCGGAATG........................	22	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................TG-TTATTGGGCCACAA-ACATC..............................	21	20	0.05	1	0	1	0	0	0	0
............................................................................................................................TATCAATGGTAGTGG-GTG-TTAC..............................................	22	20	0.05	1	0	1	0	0	0	0
................................................................................................................................................TTATTGGGCCACAA-ACATCGGAA..........................	23	20	0.05	1	0	1	0	0	0	0

droBip1

AAATGGGCCTCACTTTTTGCTACAAAATCTTTAAACATATTAAATACGTCTGATTTGTTTTTCATTAAATATGTTACACAATAGTGTGTATATTGATCGACAAAAATTACATAATAATTTTTATCATCAATTGTAGTCG-GTG-TTATTGGACCACAC-ACATCCGAATGAACTACAAACAGTGGTCTCTTAAT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AAATGATTTTCACTTTTTGCAACAAAATCCTTAAAAAA-TAAAACACATTAGATTTATGTGACATTAAATATGTAACAGAATAATGAGTAAACTGATCAATAAATACAACATAATAGTTTTTACCATCTATTGTTGATG-GTG-TAATTGGACCACAA-ACGTCAGAGTGTATTATAAACAAAGGTCTTTTAAT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AAATGAGCTTCACTCTTTGCGATGAAATCTTTAAAGAAATGAAATACTTCAGATTTGTAAGTCATTAAATAAGTTACACAATAATGTGTGTATTGATCGACAAATACAACATAATAGTTTCTGCCATCAACACTAGAAG-GAG-TTATCGGACCACAA-ACATCGGAATGAATTATAAATAAAGGCCTTTTAAT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AAATGCGCCTCACTTTTTGCTACAAAATCCTTAAGCATTGCAAAAATATCTGATTTGTATTTCATTAAATACGTTACACAATAATGTGTATATTGATCTACAAATATAACATAATAATTTTTGTCGTCAATTGAAACAG-GTG-TTATTGGCCCGCAT-ACATCAGAGTGGATTACAAATAGGGGTCTATTTAT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AAATGCGCCTCACTTTTCGCTACGAAATCCTTAAACACTGCAAAAACATCTGATTTATGTTTCATTAAATATGTTACACAATAATGTGTATATTGATCCACAAAAAAAACATAGTAATTTTTGTCGTCAATCGAAACAG-GTG-TTATTGGCCCGCAT-ACATCAGAATGGATTACAAATAGGGGTCTACTTAT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AAATGCGCCTTACATTTCGCTACAAAATCCTTAAACATTGCAAAAACATCTGATTTATGTTTAATTAAATACGTTACACAATAATGTGTATATTGATCCAGAAAAATAACATAGTAATTTTTGTCGTCAATTAAAACAG-GTG-TTATTGGCCTGCAT-ACATCAAAATGGATAACAAATAGAGGTCTACTTAT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AAATGAGCTTCACTTTTTGCGATGAAATCTTTGAAGAAATGAAATACTTCCGATTTATAAGTCATCAAATAAGTTACACAGTAATGTGTATATTGATCGACAAAGATAACATAATAGTTTCTTTCATCAACACTAGAAG-GAG-TTATCGGACCACAA-ACATCGGAATGAATTATAAATAAAGGCCGCTTAAT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AAATGATTTTCACTTTTTGCAACAAAATCCTTAAAAAA-TAAAACACATCAGATTTATGTGACATTAAATATGTAACAGAATAATGAGTAAACTGATCAATAAATACAACATAATAGTTTTTACCATCTATTGTTGCTG-GTG-TAATCGGACCACAA-ACGTCAGAGTGTATTATAAACAAAGGTCTTTTAAT	Size	Hit Count	Total Norm	Total
No Reads

dm3

AAATGAGCCTCACTCTTGGCGATAAAATCTATAAATACAGAGAACACATCTGATTTATATGTTATTATATATGTCACGCAGTAATGTGTGTATTCATAAATAAAAACAACGTAATAGTTTTTATTATCAGTAGTAGAGG-GTA-TGATTGGCCCACAG-ACATCAGAATGGACTACAAACAAAGGTCTCTGGAT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
............................................................................................................................TATCAGTAGTAGAGG-GTA-TGATTGGCC.........................................	27	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................TCAGAATGGACTACAAACAAAGGTC.......	25	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................TTTTTATTATCAGTAGTAGAGG-GT....................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TTGGCCCACAG-ACATCAGAATGGAC.....................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................................................TATGTTATTATATATGTCACGCA..................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...........................................ACACATCTGATTTATATGT....................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................TCTGATTTATATGTTATTATATATGT........................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

AAATGAGCTTCACTCTTGGCTACAAAATCTTGAAACATGCTAAACACATCAGATTTATATTTAATTAAATAAGTTACACAATAATGTGTAAACTGATCAACAAAGATCACAAAATAATTTTTATCATCTAAAGTAACTG-GAG-TAATAGGCCCACAG-ACATCTGAGTGTACTACAAAAAGTGGTCTTTTAAT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................................................................................TAATGTGTAAACTGATCAACAAAGA........................................................................................	25	1	1345.00	1345	0	0	0	1	0	0	588	336	289	129	2	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTG........................	22	1	1239.00	1239	0	0	0	0	0	0	136	939	34	128	0	0	2	0	0	0	0
..............................................................................CAATAATGTGTAAACTGATCAACAAAGA........................................................................................	28	1	209.00	209	0	0	0	0	0	0	60	73	43	33	0	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACATGC..........................................................................................................................................................	24	1	203.00	203	0	0	0	2	7	0	60	39	37	26	0	0	29	3	0	0	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-TA................................................	26	1	197.00	197	0	0	0	0	0	0	0	103	8	85	0	0	1	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTAC.....................	25	1	191.00	191	0	0	0	0	0	0	72	56	33	30	0	0	0	0	0	0	0
...............TTGGCTACAAAATCTTGAAACATGC..........................................................................................................................................................	25	1	153.00	153	0	0	0	0	0	0	50	31	25	45	0	0	2	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-TAATA.............................................	26	1	142.00	142	0	0	0	0	7	0	38	2	83	11	1	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAG..........................	20	1	137.00	137	0	0	0	0	0	0	31	68	11	27	0	0	0	0	0	0	0
.........................................................................................................................................................CACAG-ACATCTGAGTGTACTACAAAAAA............	28	1	129.00	129	0	0	0	0	0	0	79	0	48	2	0	0	0	0	0	0	0
.........................................................................................................................................................CACAG-ACATCTGAGTGTACTACAAAAAG............	28	1	90.00	90	0	0	0	1	0	0	34	23	18	11	1	0	1	1	0	0	0
...............................................................................AATAATGTGTAAACTGATCAACAAAGA........................................................................................	27	1	81.00	81	0	0	0	0	0	0	34	29	13	5	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-TAA...............................................	24	1	69.00	69	0	0	0	1	49	0	9	0	6	0	1	0	0	3	0	0	0
................................................................................................................................TAAAGTAACTG-GAG-TAATAGGCCCACAG-A..................................	29	1	60.00	60	0	0	0	0	0	0	17	24	12	7	0	0	0	0	0	0	0
..................................................................................................................................................................TCTGAGTGTACTACAAAAAGTGGTCTTT....	28	1	56.00	56	0	1	0	0	0	0	10	5	7	19	14	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAA..........................	20	1	55.00	55	0	0	0	0	0	0	14	26	4	11	0	0	0	0	0	0	0
................................................................................................................................................TAATAGGCCCACAG-ACATCTGAGTG........................	25	1	55.00	55	0	0	0	0	0	0	17	31	3	4	0	0	0	0	0	0	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-TAATA.............................................	29	1	49.00	49	0	0	0	0	0	0	0	27	1	21	0	0	0	0	0	0	0
.....................................TGCTAAACACATCAGATTTATATTT....................................................................................................................................	25	1	46.00	46	0	0	0	0	0	0	7	3	13	23	0	0	0	0	0	0	0
.............................................................................ACAATAATGTGTAAACTGATCAACAAAGA........................................................................................	29	1	43.00	43	0	0	0	0	0	0	24	11	7	1	0	0	0	0	0	0	0
.................................................................................TAATGTGTAAACTGATCAACAAAG.........................................................................................	24	1	41.00	41	0	0	0	0	0	0	9	10	11	11	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-TA................................................	23	1	40.00	40	0	0	0	0	8	0	8	0	15	2	1	0	0	6	0	0	0
..................................................................................................................................................................TCTGAGTGTACTACAAAAAGTGGTC.......	25	1	40.00	40	0	0	0	0	0	0	15	9	6	8	2	0	0	0	0	0	0
.................................................................................TAATGTGTAAACTGATCAACAAAGAA.......................................................................................	26	1	38.00	38	0	0	0	0	0	0	14	15	5	4	0	0	0	0	0	0	0
...........................................................................................................................TCATCTAAAGTAACTG-GAG-TAATAGGC..........................................	27	1	37.00	37	0	0	0	0	0	0	16	10	6	5	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTGTAAACTGATCAACA............................................................................................	28	1	36.00	36	0	0	0	2	0	0	12	8	0	14	0	0	0	0	0	0	0
................................................................................ATAATGTGTAAACTGATCAACAAAGA........................................................................................	26	1	35.00	35	0	0	0	0	0	0	14	10	6	4	1	0	0	0	0	0	0
...........................................................................................................................TCATCTAAAGTAACTG-GAG-TAATAGGCC.........................................	28	1	35.00	35	0	0	0	0	0	0	10	9	2	13	0	0	1	0	0	0	0
.........................................................................................................................................................CACAG-ACATCTGAGTGTACTACAAAA..............	26	1	33.00	33	0	0	0	0	0	0	14	3	7	8	0	0	1	0	0	0	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-T.................................................	25	1	33.00	33	0	0	0	0	0	0	0	16	0	17	0	0	0	0	0	0	0
...........................TCTTGAAACATGCTAAACACATCAGA.............................................................................................................................................	26	1	33.00	33	0	0	0	0	0	0	9	5	5	14	0	0	0	0	0	0	0
..................................................................................................................................................................TCTGAGTGTACTACAAAAAGTGGTCTT.....	27	1	31.00	31	0	0	0	0	0	0	8	3	5	5	10	0	0	0	0	0	0
...............TTGGCTACAAAATCTTGAAACATG...........................................................................................................................................................	24	1	29.00	29	0	0	0	0	0	0	7	13	2	7	0	0	0	0	0	0	0
................................................................................................................................TAAAGTAACTG-GAG-TAATAGGCCCACA.....................................	27	1	27.00	27	0	0	0	1	0	0	7	5	4	6	0	0	3	1	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAAA.........................	21	1	27.00	27	0	0	0	0	0	0	4	11	1	11	0	0	0	0	0	0	0
........TTCACTCTTGGCTACAAAATCTTGAAACA.............................................................................................................................................................	29	1	26.00	26	0	0	0	3	0	0	7	3	6	7	0	0	0	0	0	0	0
....................TACAAAATCTTGAAACATGCTAAACACA..................................................................................................................................................	28	1	25.00	25	0	0	0	0	0	0	13	9	1	2	0	0	0	0	0	0	0
..........................................................................................................................................................ACAG-ACATCTGAGTGTACTACAAAAAG............	27	1	24.00	24	0	0	0	0	0	0	10	7	2	5	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGT.........................	21	1	24.00	24	0	0	2	1	0	0	1	19	0	1	0	0	0	0	0	0	0
........................................................................................................................................................CCACAG-ACATCTGAGTGTACTACAAAA..............	27	1	24.00	24	0	0	0	0	0	0	9	2	11	1	1	0	0	0	0	0	0
...TGAGCTTCACTCTTGGCTACAAAA.......................................................................................................................................................................	24	1	24.00	24	0	0	0	1	21	0	0	0	0	2	0	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACATG...........................................................................................................................................................	23	1	22.00	22	0	0	0	0	0	0	3	7	0	7	0	0	2	3	0	0	0
.........................................................................................................................................................CACAG-ACATCTGAGTGTACTACAAAAA.............	27	1	22.00	22	0	0	0	0	0	0	7	5	9	1	0	0	0	0	0	0	0
..............................................................................................................................TCTAAAGTAACTG-GAG-TAATAGGCCCACA.....................................	29	1	21.00	21	0	0	0	0	0	0	10	4	5	0	0	0	2	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACTACAAA...............	31	1	21.00	21	0	0	0	0	0	0	16	2	1	2	0	0	0	0	0	0	0
..........................................................................................................................................................ACAG-ACATCTGAGTGTACTACAAAAAA............	27	1	20.00	20	0	0	0	0	0	0	14	0	6	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGA...........................	19	1	20.00	20	0	0	0	0	0	0	3	15	0	2	0	0	0	0	0	0	0
.............................TTGAAACATGCTAAACACATCAGA.............................................................................................................................................	24	1	20.00	20	0	0	0	0	12	0	3	1	2	2	0	0	0	0	0	0	0
................................................................................................TCAACAAAGATCACAAAATAAT............................................................................	22	1	20.00	20	0	0	0	0	0	0	0	6	0	14	0	0	0	0	0	0	0
..............................................................................................................................TCTAAAGTAACTG-GAG-TAATAGGCC.........................................	25	1	20.00	20	0	0	0	0	0	0	6	7	1	1	0	0	5	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACTACA.................	29	1	19.00	19	0	0	0	0	0	0	5	8	1	5	0	0	0	0	0	0	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-..................................................	24	1	19.00	19	0	0	0	0	0	0	0	3	0	14	0	0	0	2	0	0	0
..................................................................................AATGTGTAAACTGATCAACAAAGA........................................................................................	24	1	19.00	19	0	0	0	0	0	0	9	3	5	2	0	0	0	0	0	0	0
................................................................................................................................................TAATAGGCCCACAG-ACATCTGAGTGTAC.....................	28	1	18.00	18	0	0	0	0	0	0	7	11	0	0	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-......................................................	18	1	18.00	18	0	0	0	0	16	0	1	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GA....................................................	20	1	17.00	17	0	0	0	0	16	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................CCACAG-ACATCTGAGTGTACTACAAAAAA............	29	1	17.00	17	0	0	0	0	0	0	9	0	8	0	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-TAATAGGC..........................................	29	1	16.00	16	0	0	0	0	0	0	6	1	8	1	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAC..........................	20	1	16.00	16	0	0	0	0	0	0	5	8	0	3	0	0	0	0	0	0	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-TAA...............................................	27	1	16.00	16	0	0	0	0	0	0	0	10	0	6	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-..................................................	21	1	16.00	16	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTGTAAACTGATCAACAAA..........................................................................................	30	1	16.00	16	0	0	0	0	0	0	7	4	1	4	0	0	0	0	0	0	0
..................................................................................................................................................................TCTGAGTGTACTACAAAAAGTGGTCT......	26	1	15.00	15	0	0	1	0	0	0	4	0	3	0	7	0	0	0	0	0	0
.........................................................................................................................................TG-GAG-TAATAGGCCCACAG-ACATCTGA...........................	27	1	15.00	15	0	0	0	0	0	0	5	3	4	3	0	0	0	0	0	0	0
......................................................................................TGTAAACTGATCAACAAAGATCACAAAA................................................................................	28	1	15.00	15	0	0	0	0	8	0	0	1	1	5	0	0	0	0	0	0	0
............................................CACATCAGATTTATATTTAATTAAA.............................................................................................................................	25	1	15.00	15	0	0	0	0	0	0	1	0	1	0	0	0	3	10	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAAAA........................	22	1	14.00	14	0	0	0	0	0	0	0	11	1	2	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACT....................	26	1	14.00	14	0	0	0	0	0	0	5	6	1	2	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-TAATAGG...........................................	28	1	14.00	14	0	0	0	0	0	0	4	1	9	0	0	0	0	0	0	0	0
........TTCACTCTTGGCTACAAAATCTTGA.................................................................................................................................................................	25	1	14.00	14	0	0	0	0	0	0	3	2	5	4	0	0	0	0	0	0	0
........................................................................................................................................................CCACAG-ACATCTGAGTGTACTACAAA...............	26	1	13.00	13	0	0	0	0	0	0	7	2	4	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGA.........................	21	1	13.00	13	0	0	0	0	0	0	1	9	1	2	0	0	0	0	0	0	0
....................................................................................TGTGTAAACTGATCAACAAAGA........................................................................................	22	1	13.00	13	0	0	0	0	9	0	2	1	1	0	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTGTAAACTGATCAACAA...........................................................................................	29	1	13.00	13	0	0	0	0	0	0	4	4	3	2	0	0	0	0	0	0	0
.......................................................................................................................................................CCCACAG-ACATCTGAGTGTACTACAAAA..............	28	1	12.00	12	0	0	0	0	0	0	4	4	2	0	2	0	0	0	0	0	0
..............................................................................................................................TCTAAAGTAACTG-GAG-TAATAGGCCCACAG-A..................................	31	1	12.00	12	0	0	0	0	0	0	9	3	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAG-ACATCTGAGTGTACTACAAAAAG............	26	1	12.00	12	0	0	0	0	0	0	5	3	4	0	0	0	0	0	0	0	0
........................................................................................................................................................CCACAG-ACATCTGAGTGTACTACAAAAAG............	29	1	12.00	12	0	0	0	0	0	0	5	3	3	1	0	0	0	0	0	0	0
..............................................................................................................................TCTAAAGTAACTG-GAG-..................................................	16	1	12.00	12	0	0	0	0	0	0	5	7	0	0	0	0	0	0	0	0	0
..........................ATCTTGAAACATGCTAAACACATCAGA.............................................................................................................................................	27	1	12.00	12	0	0	0	0	0	0	3	4	2	3	0	0	0	0	0	0	0
.............TCTTGGCTACAAAATCTTGAAACATGC..........................................................................................................................................................	27	1	12.00	12	0	0	0	0	0	0	4	3	0	4	0	0	1	0	0	0	0
...........................................................................................................................................................CAG-ACATCTGAGTGTACTACAAAAAA............	26	1	12.00	12	0	0	0	0	0	0	7	0	5	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACTACAAAA..............	32	1	11.00	11	0	0	0	0	0	0	5	4	1	1	0	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACATGCTA........................................................................................................................................................	26	1	11.00	11	0	0	0	0	0	0	0	1	1	0	0	0	6	3	0	0	0
.........................................................................................................................................TG-GAG-TAATAGGCCCACAG-ACATCTGAG..........................	28	1	11.00	11	0	0	0	0	0	0	2	4	2	3	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-TAAT..............................................	25	1	11.00	11	0	0	0	0	0	0	3	1	7	0	0	0	0	0	0	0	0
....................................................................................TGTGTAAACTGATCAACAAAGATCACA...................................................................................	27	1	11.00	11	0	0	0	0	0	0	0	0	1	2	8	0	0	0	0	0	0
..................................................................................................................................................................TCTGAGTGTACTACAAAAAGTGGT........	24	1	11.00	11	0	0	0	0	0	0	5	1	2	3	0	0	0	0	0	0	0
........................................................................................................................................................CCACAG-ACATCTGAGTGTACTACAAAAA.............	28	1	11.00	11	0	0	0	0	0	0	8	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTA......................	24	1	11.00	11	0	0	0	0	0	0	5	3	2	1	0	0	0	0	0	0	0
...........................TCTTGAAACATGCTAAACACA..................................................................................................................................................	21	1	11.00	11	0	0	0	0	6	0	2	2	0	1	0	0	0	0	0	0	0
..............................................................................CAATAATGTGTAAACTGATCAACAAAG.........................................................................................	27	1	10.00	10	0	0	0	0	0	0	6	0	4	0	0	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACATGCT.........................................................................................................................................................	25	1	10.00	10	0	0	0	0	0	0	0	1	0	0	0	0	8	1	0	0	0
........TTCACTCTTGGCTACAAAATCTTGAAAC..............................................................................................................................................................	28	1	10.00	10	0	0	0	0	0	0	2	1	3	4	0	0	0	0	0	0	0
...TGAGCTTCACTCTTGGCTACAAAATC.....................................................................................................................................................................	26	1	10.00	10	0	0	0	0	0	0	1	0	0	3	1	0	4	1	0	0	0
............CTCTTGGCTACAAAATCTTGAAACA.............................................................................................................................................................	25	1	9.00	9	0	0	0	1	7	0	0	0	0	0	1	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACATGCA.........................................................................................................................................................	25	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	7	2	0	0	0
...TGAGCTTCACTCTTGGCTACAAAATCT....................................................................................................................................................................	27	1	8.00	8	0	0	0	2	0	0	0	0	0	1	0	0	4	1	0	0	0
.........................................................................................................................................................................GTACTACAAAAAGTGGTCTTT....	21	1	8.00	8	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TACTACAAAAAGTGGTCTTTTAAT	24	1	8.00	8	0	0	0	0	0	0	0	1	3	3	0	0	1	0	0	0	0
........................................................................................................................TTATCATCTAAAGTAACTG-GA....................................................	21	1	8.00	8	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GTACTACAAAAAGTGGTC.......	18	1	8.00	8	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................CACAATAATGTGTAAACTGATCAACAAAGA........................................................................................	30	1	8.00	8	0	0	0	0	0	0	5	3	0	0	0	0	0	0	0	0	0
.................................................................................TAATGTGTAAACTGATCAACAAA..........................................................................................	23	1	8.00	8	0	0	0	0	0	0	4	1	1	2	0	0	0	0	0	0	0
.......CTTCACTCTTGGCTACAAAATCTTGA.................................................................................................................................................................	26	1	8.00	8	0	0	0	0	0	0	2	2	4	0	0	0	0	0	0	0	0
...........................................................................................................................TCATCTAAAGTAACTG-GAG-TA................................................	21	1	8.00	8	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................TGAGTGTACTACAAAAAGTGGTCTT.....	25	1	8.00	8	0	0	0	0	0	0	0	0	1	1	6	0	0	0	0	0	0
........................................TAAACACATCAGATTTATATTTAATTAAA.............................................................................................................................	29	1	7.00	7	0	0	0	0	0	0	0	2	1	4	0	0	0	0	0	0	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GA....................................................	23	1	7.00	7	0	0	0	0	0	0	0	5	0	1	0	0	0	1	0	0	0
.....................................TGCTAAACACATCAGATTTATATTTAA..................................................................................................................................	27	1	7.00	7	0	0	0	0	0	0	0	0	4	3	0	0	0	0	0	0	0
.............................TTGAAACATGCTAAACACATCAGATT...........................................................................................................................................	26	1	7.00	7	0	0	0	0	0	0	1	0	0	6	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGACA.........................	21	1	7.00	7	0	0	0	0	0	0	1	5	0	1	0	0	0	0	0	0	0
..............................................................................CAATAATGTGTAAACTGATCAACAAA..........................................................................................	26	1	7.00	7	0	0	0	0	0	0	2	0	4	1	0	0	0	0	0	0	0
.................................................................................................................................................AATAGGCCCACAG-ACATCTGAGTG........................	24	1	7.00	7	0	0	0	0	0	0	2	3	0	2	0	0	0	0	0	0	0
........................................TAAACACATCAGATTTATATTTAATT................................................................................................................................	26	1	7.00	7	0	0	0	0	0	0	0	2	1	2	0	0	2	0	0	0	0
....................................................................................................................................................................TGAGTGTACTACAAAAAGTGGTCTTT....	26	1	7.00	7	0	0	0	0	0	0	0	1	0	0	6	0	0	0	0	0	0
...................................................................................ATGTGTAAACTGATCAACAAAGA........................................................................................	23	1	7.00	7	0	0	0	0	0	0	5	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GTACTACAAAAAGTGGT........	17	1	7.00	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
..........................................................................................................................................................ACAG-ACATCTGAGTGTACTACAAAAA.............	26	1	6.00	6	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0
................................................................................................................................TAAAGTAACTG-GAG-TAATAGGCCCAC......................................	26	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0
................................................................................................................................................................CATCTGAGTGTACTACAAAAAGTGGTC.......	27	1	6.00	6	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0
..........................................................................................................TCACAAAATAATTTTTATCATCTAAAGT............................................................	28	1	6.00	6	0	0	0	0	0	0	1	2	0	3	0	0	0	0	0	0	0
.......................................................................................................................................................CCCACAG-ACATCTGAGTGTACTACAAAAAA............	30	1	6.00	6	0	0	0	0	0	0	5	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................TTTATCATCTAAAGTAACTG-GAG-TAATA.............................................	28	1	6.00	6	0	0	0	0	0	0	2	1	1	2	0	0	0	0	0	0	0
..........................................................................................................................ATCATCTAAAGTAACTG-GAG-TAATAGGC..........................................	28	1	6.00	6	0	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0
................................................................................................................................................TAATAGGCCCACAG-ACATCTGAG..........................	23	1	6.00	6	0	0	0	0	0	0	2	3	1	0	0	0	0	0	0	0	0
.................................AACATGCTAAACACATCAGATTTA.........................................................................................................................................	24	1	6.00	6	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACATGCTAA.......................................................................................................................................................	27	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	0
.........................................................................................................................................TG-GAG-TAATAGGCCCACAG-ACATCTGAA..........................	28	1	6.00	6	0	0	0	0	0	0	2	3	0	1	0	0	0	0	0	0	0
..............................................................................................................................................G-TAATAGGCCCACAG-ACATCTGAGTG........................	26	1	6.00	6	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTAA.......................	23	1	6.00	6	0	0	0	0	0	0	4	1	0	1	0	0	0	0	0	0	0
.....................................................................................................................................TAACTG-GAG-TAATAGGCCCACAG-ACATC..............................	28	1	6.00	6	0	0	0	0	0	0	0	1	1	1	0	0	3	0	0	0	0
.............................................................................................................................................AG-TAATAGGCCCACAG-ACATCTGAGTG........................	27	1	5.00	5	0	0	0	0	0	0	2	2	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................CACAG-ACATCTGAGTGTACTACAAAAAAA...........	29	1	5.00	5	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTGTAAACTGATCAAC.............................................................................................	27	1	5.00	5	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0
........................................................................................................................TTATCATCTAAAGTAACTG-GAG-TAATA.............................................	27	1	5.00	5	0	0	0	0	0	0	2	1	0	2	0	0	0	0	0	0	0
....................TACAAAATCTTGAAACATGCTAAACAC...................................................................................................................................................	27	1	5.00	5	0	0	0	1	0	0	3	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGATAA........................	22	1	5.00	5	0	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0
................................................................................................TCAACAAAGATCACAAAATAATTTT.........................................................................	25	1	5.00	5	0	0	0	1	0	0	1	1	1	1	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGATA.........................	21	1	5.00	5	0	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0
............................................................................................................................................................AG-ACATCTGAGTGTACTACAAAAAG............	25	1	5.00	5	0	0	0	0	0	0	1	0	2	0	2	0	0	0	0	0	0
............CTCTTGGCTACAAAATCTTGAAACATGC..........................................................................................................................................................	28	1	5.00	5	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................TCTAAAGTAACTG-GAG-TAATAGGCCCAC......................................	28	1	4.00	4	0	0	0	1	0	0	0	0	0	0	0	0	2	1	0	0	0
.........................................................................................................................................................CACAG-ACATCTGAGTGTACTACAAA...............	25	1	4.00	4	0	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-TAAT..............................................	28	1	4.00	4	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0
.....................................TGCTAAACACATCAGATTTATATT.....................................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	1	0	1	2	0	0	0	0	0	0	0
......................................................................................................................................................GCCCACAG-ACATCTGAGTGTACTACAAA...............	28	1	4.00	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................AAGTAACTG-GAG-TAATAGGCCCACAG-A..................................	27	1	4.00	4	0	0	0	0	0	0	1	1	0	2	0	0	0	0	0	0	0
..........................................................................................................................................................................TACTACAAAAAGTGGTCTTTTAA.	23	1	4.00	4	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGAA........................	22	1	4.00	4	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACTA...................	27	1	4.00	4	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATCATCTAAAGTAACTG-GAG-TAATA.............................................	25	1	4.00	4	0	0	0	0	0	0	2	0	1	0	1	0	0	0	0	0	0
.......................................................................................................................................................CCCACAG-ACATCTGAGTGTACTACAAA...............	27	1	4.00	4	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................TAATAGGCCCACAG-ACATCTGAA..........................	23	1	4.00	4	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-T.................................................	22	1	4.00	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
...................................................................................ATGTGTAAACTGATCAACAAA..........................................................................................	21	1	4.00	4	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0
...............TTGGCTACAAAATCTTGAAACATGCT.........................................................................................................................................................	26	1	4.00	4	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0
....................TACAAAATCTTGAAACATGCTAAACA....................................................................................................................................................	26	1	4.00	4	0	0	0	0	0	0	1	0	2	0	0	0	1	0	0	0	0
................................................................................................TCAACAAAGATCACAAAATAATTTTTA.......................................................................	27	1	4.00	4	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0
.........TCACTCTTGGCTACAAAATCTTGAAACA.............................................................................................................................................................	28	1	4.00	4	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGA.......................	23	1	3.00	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGGCCCACAG-ACATCTGAGTGTACTACA.................	28	1	3.00	3	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCTGAGTGTACTACAAAAAGTGGTC.......	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..................................................................................................................TAATTTTTATCATCTAAAGTAACTG-GA....................................................	27	1	3.00	3	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0
...............................................................................AATAATGTGTAAACTGATCAACAAAG.........................................................................................	26	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................AATAGGCCCACAG-ACATCTGAGTGTAC.....................	27	1	3.00	3	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0
......................................................................................................................................................GCCCACAG-ACATCTGAGTGTACTACA.................	26	1	3.00	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................TAATAGGCCCACAG-ACATCTGAGA.........................	24	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TG-GAG-TAATAGGCCCACAG-ACATCTGAGA.........................	29	1	3.00	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACA....................	26	1	3.00	3	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0
....................................................................................................................................................AGGCCCACAG-ACATCTGAGTGTACTACAAA...............	30	1	3.00	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGAAA.......................	23	1	3.00	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
......GCTTCACTCTTGGCTACAAAATCTTGA.................................................................................................................................................................	27	1	3.00	3	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0
....................................................................................................................................................AGGCCCACAG-ACATCTGAGTGTAC.....................	24	1	3.00	3	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTGTAAACTGATCAACAAAGA........................................................................................	32	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
...............TTGGCTACAAAATCTTGAAACA.............................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0
.................................................................TAAATAAGTTACACAATAATGTGTA........................................................................................................	25	1	3.00	3	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0
............................................CACATCAGATTTATATTTAATTAA..............................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
...........................TCTTGAAACATGCTAAACAC...................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0
..............................................................................CAATAATGTGTAAACTGATCAACAAAGAA.......................................................................................	29	1	3.00	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................TAATAGGCCCACAG-ACATCTGAAA.........................	24	1	3.00	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
...............................................................................AATAATGTGTAAACTGATCAACAAAGAA.......................................................................................	28	1	3.00	3	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTGTAAACTGATCAACAAAG.........................................................................................	31	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................TATCATCTAAAGTAACTG-GAG-TAATAGGCC.........................................	30	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................ACTG-GAG-TAATAGGCCCACAG-ACATC..............................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGC.......................	23	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
...TGAGCTTCACTCTTGGCTACAAAATCTTGAA................................................................................................................................................................	31	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
..................................................................................................AACAAAGATCACAAAATA..............................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................................................................G-ACATCTGAGTGTACTACAAAAAA............	24	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
..................................................................................................................TAATTTTTATCATCTAAAGTAACTG-GAG-..................................................	28	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACAT............................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
..............CTTGGCTACAAAATCTTGAAACATGC..........................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAT..........................	20	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
...............TTGGCTACAAAATCTTGAAA...............................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
.........................................................TATTTAATTAAATAAGTTACACAATA...............................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
...........................................................................................................................TCATCTAAAGTAACTG-GAG-TAATA.............................................	24	1	2.00	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
............................................CACATCAGATTTATATTTAATTA...............................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
................................................................................................................................................................CATCTGAGTGTACTACAAAAAGTGGT........	26	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.............................................................................ACAATAATGTGTAAACTGATCAACAAAGAA.......................................................................................	30	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................GGCCCACAG-ACATCTGAGTGTACTACAAA...............	29	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
.....................................TGCTAAACACATCAGATTTATATTTAAT.................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
................................................................................................TCAACAAAGATCACAAAATAATTT..........................................................................	24	1	2.00	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
..................................................................................................................TAATTTTTATCATCTAAAGTAACTG-G.....................................................	26	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
..............................................................................................................................TCTAAAGTAACTG-GAG-TAATAGGCCCA.......................................	27	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................TGTACTACAAAAAGTGGT........	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.................................................................................TAATGTGTAAACTGATCAACAAAGT........................................................................................	25	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
.................................................................TAAATAAGTTACACAATAATGT...........................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.....................................TGCTAAACACATCAGATTTATATTTAAA.................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
................................................................................................................................TAAAGTAACTG-GAG-TAATAGGCC.........................................	23	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
.....................................................................................GTGTAAACTGATCAACAAAGA........................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
................................................TCAGATTTATATTTAATTAAATAAGT........................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
..............................................................................................................................TCTAAAGTAACTG-GAG-TAATAGGCCC........................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
................................................................................................................................................................CATCTGAGTGTACTACAAAAAGTGGTCTT.....	29	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
..............................................................................................................................TCTAAAGTAACTG-GAG-TAATAGGC..........................................	24	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................TAATAGGCCCACAG-ACATCTGA...........................	22	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
............................................CACATCAGATTTATATTTAATTAAATAAG.........................................................................................................................	29	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..................................................................................................................................................................TCTGAGTGTACTACAAAA..............	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
............................................CACATCAGATTTATATTTAATTAAAT............................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.....................................................................................................................................TAACTG-GAG-TAATAGGCCCACAG-ACA................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
..............................TGAAACATGCTAAACACATCAGATT...........................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
............................................................................................................................CATCTAAAGTAACTG-GAG-..................................................	18	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
........TTCACTCTTGGCTACAAAATC.....................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
..................................................................................................................................................ATAGGCCCACAG-ACATCTGAGTGTAC.....................	26	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.............................TTGAAACATGCTAAACACATCAGATTTA.........................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
.....................................TGCTAAACACATCAGATTTATATTTA...................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACTAC..................	28	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
......................................................................................................................................................GCCCACAG-ACATCTGAGTGTACTACAAAA..............	29	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACTACAA................	30	1	2.00	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
...........................TCTTGAAACATGCTAAACACATCAGAT............................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
.........................................................................................................................................................................GTACTACAAAAAGTGGTCTTTTAA.	24	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
.................................................................................TAATGTGTAAACTGATCAACAAAGAT.......................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.......................................................................................................AGATCACAAAATAATTTTTATCATC..................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACATGCTAAA......................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0
.......................................................................................................................................................CCCACAG-ACATCTGAGTGTACTACA.................	25	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
...............TTGGCTACAAAATCTTGAAACATGCA.........................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
................................................................................................TCAACAAAGATCACAAAATAATT...........................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
................................................................................................................................................TAATAGGCCCACAG-ACATCTGAGT.........................	24	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
..........................................................................................................TCACAAAATAATTTTTATCATCTA................................................................	24	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
....................................................................................TGTGTAAACTGATCAACAAAGAA.......................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
..........................................................................TACACAATAATGTGTAAACTGATCA...............................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.......................................................................................................................................................CCCACAG-ACATCTGAGTGTACTACAAAAAG............	30	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................TTTATCATCTAAAGTAACTG-GAG-TA................................................	25	1	2.00	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
......................................................................................TGTAAACTGATCAACAAAGATCACA...................................................................................	25	1	2.00	2	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAAG.........................	21	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
....................................................................................................................ATTTTTATCATCTAAAGTAACTG-GAG-TA................................................	28	1	2.00	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0
..............................................................................................................................................................................ACAAAAAGTGGTCTTT....	16	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.....................................TGCTAAACACATCAGATTTATATTTAAAA................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................ACACAATAATGTGTAAACTGATCAACAAAGA........................................................................................	31	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................TATATTTAATTAAATAAGTTACACAATA...............................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................ATAGGCCCACAG-ACATCTGAGTGTACTACAAAA..............	33	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
................TGGCTACAAAATCTTGAAACAA............................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................ACTACAAAAAGTGGTCTT.....	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................ATGTGTAAACTGATCAACA............................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSec2

AAATGAGCTTCACTCTTGGCTACAAAATCTTGAAACATGCTAAACACATCAGATTTATATTTAATTAAATAAGTTACACAATAATGTGTAAACTGATCAACAAAGATCACAAAATAATTTTTATCATCTAAAGTAACTG-GAG-TAATAGGCCCACAG-ACATCTGAGTGTACTACAAAAAGTGGTCTTTTAAT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-T.................................................	25	20	0.65	13	7	4	2	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-..................................................	24	20	0.60	12	8	0	4	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-TA................................................	26	20	0.25	5	3	1	1	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GA....................................................	23	20	0.15	3	1	1	0	1
........TTCACTCTTGGCTACAAAATCTTGAAACA.............................................................................................................................................................	29	20	0.15	3	3	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTAC.....................	25	20	0.10	2	2	0	0	0
...TGAGCTTCACTCTTGGCTACAAAAT......................................................................................................................................................................	25	20	0.10	2	2	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTG........................	22	20	0.10	2	2	0	0	0
.........TCACTCTTGGCTACAAAATCTTGAAACA.............................................................................................................................................................	28	20	0.10	2	2	0	0	0
...TGAGCTTCACTCTTGGCTACAAAATC.....................................................................................................................................................................	26	20	0.10	2	1	0	1	0
......................................................................................................................TTTTATCATCTAAAGTAACTG-GAG-TAA...............................................	27	20	0.10	2	2	0	0	0
..........................................................................................................................................................................TACTACAAAAAGTGGTCTTTTAAT	24	20	0.10	2	1	0	1	0
....................................................................................TGTGTAAACTGATCAACAAAGA........................................................................................	22	17	0.06	1	0	0	1	0
............................................CACATCAGATTTATATTTAATTAAA.............................................................................................................................	25	17	0.06	1	0	0	0	1
.........................................AAACACATCAGATTTATATTT....................................................................................................................................	21	18	0.06	1	0	0	0	1
..........................................................................TACACAATAATGTGTAAACTGATCAAC.............................................................................................	27	19	0.05	1	1	0	0	0
......GCTTCACTCTTGGCTACAAAATCTTGA.................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.............TCTTGGCTACAAAATCTTGAAACA.............................................................................................................................................................	24	20	0.05	1	1	0	0	0
....................................................................................................................................................................TGAGTGTACTACAAAAAGTGG.........	21	20	0.05	1	0	1	0	0
......GCTTCACTCTTGGCTACAAAATCT....................................................................................................................................................................	24	20	0.05	1	1	0	0	0
...TGAGCTTCACTCTTGGCTACAAAA.......................................................................................................................................................................	24	20	0.05	1	1	0	0	0
.....................................................................TAAGTTACACAATAATGTGTA........................................................................................................	21	20	0.05	1	1	0	0	0
..ATGAGCTTCACTCTTGGCTACAAA........................................................................................................................................................................	24	20	0.05	1	1	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAGTGTACTAC..................	28	20	0.05	1	0	0	1	0
.AATGAGCTTCACTCTTGGCTACAAA........................................................................................................................................................................	25	20	0.05	1	1	0	0	0
...................................................................................................................................................TAGGCCCACAG-ACATCTGAG..........................	20	20	0.05	1	1	0	0	0
...TGAGCTTCACTCTTGGCTACAAAATCT....................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.......................................................................................................................TTTATCATCTAAAGTAACTG-GAG-T.................................................	24	20	0.05	1	1	0	0	0
..............................................................AATTAAATAAGTTACACAATAATGTG..........................................................................................................	26	20	0.05	1	1	0	0	0
.......................................................................................................................TTTATCATCTAAAGTAACTG-GAG-TA................................................	25	20	0.05	1	1	0	0	0

droYak3

AAATGAGCCTCACTCTTGGCGATAAAATCTTTATATACAGAGAAAACATCTGATTTATATTTAATTATATATGTCACACAGTAATGTGTGTATTCATCAATAAAAACAACGTAATAGTTTTTATTATCAATAGTAGAGG-GTG-TGATTGGCCCACAG-ACATCGGAATGGACTACAAACAAAGGTCTCTGGAT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.............................................................................................................................................TG-TGATTGGCCCACAG-ACATCGGAAT.........................	26	2	21.50	43	0	1	0	0	0	0	0	0	0	0	42
..................................................................................................................................................................TCGGAATGGACTACAAACAAAGGTC.......	25	2	4.50	9	1	3	1	0	0	0	0	0	0	0	4
....................................................................................................................................................TGGCCCACAG-ACATCGGAATGGAC.....................	24	2	3.50	7	0	6	0	0	0	0	1	0	0	0	0
...................................................................................................................................................TTGGCCCACAG-ACATCGGAATGGAC.....................	25	2	3.00	6	0	5	0	0	0	0	1	0	0	0	0
.........................................................................................................................TATTATCAATAGTAGAGG-GTG-TG................................................	23	2	2.50	5	0	1	1	0	0	0	3	0	0	0	0
.........................................................................................................................TATTATCAATAGTAGAGG-GTG-TGATT.............................................	26	2	2.00	4	0	0	4	0	0	0	0	0	0	0	0
....................................................................................................TAAAAACAACGTAATAGTTTTTATTA....................................................................	26	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3
...............................................................................................................................CAATAGTAGAGG-GTG-TGATTGGCC.........................................	24	2	1.50	3	0	1	2	0	0	0	0	0	0	0	0
............................................................................................................................TATCAATAGTAGAGG-GTG-TGATTGGCC.........................................	27	2	1.50	3	0	1	2	0	0	0	0	0	0	0	0
..............................................................................................................................................G-TGATTGGCCCACAG-ACATCGGAAT.........................	25	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3
..............................................................................................................................TCAATAGTAGAGG-GTG-TGATTGGCC.........................................	25	2	1.00	2	0	0	2	0	0	0	0	0	0	0	0
..........................................................................................TATTCATCAATAAAAACAACGTAATAGT............................................................................	28	2	1.00	2	0	1	1	0	0	0	0	0	0	0	0
............................................................................................TTCATCAATAAAAACAACGTAATAGT............................................................................	26	2	1.00	2	0	2	0	0	0	0	0	0	0	0	0
.........................................................................................................................TATTATCAATAGTAGAGG-GTG-TGAT..............................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0	0
.........................................................................................................................TATTATCAATAGTAGAGG-GT....................................................	20	2	1.00	2	0	0	0	0	0	0	2	0	0	0	0
.........................................................................................................................TATTATCAATAGTAGAGG-GTG-TGA...............................................	24	2	1.00	2	0	1	0	0	0	0	1	0	0	0	0
.............................................................................................................................................TG-TGATTGGCCCACAG-ACATCGGAATG........................	27	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................CACAG-ACATCGGAATGGACTACA.................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................TATCAATAGTAGAGG-GTG-TGATTGGC..........................................	26	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................TG-TGATTGGCCCACAG-ACATCGG............................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................TTTATTATCAATAGTAGAGG-GTG-TGA...............................................	26	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................TCGGAATGGACTACAAACAAAGGT........	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................TAATGTGTGTATTCATCAATAAAAA........................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................TCATCAATAAAAACAACGTAATAGC............................................................................	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................TAATTATATATGTCACACAGTAATG............................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................TGGCCCACAG-ACATCGGAATGGAA.....................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
AAATGAGCCTCACTCTTGGCG.............................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................TGATTGGCCCACAG-ACATCGGAATG........................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................TG-TGATTGGCCCACAG-ACATCGGAA..........................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TGGACTACAAACAAAGGTCTCTGGA.	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................CCCACAG-ACATCGGAATGGACTACA.................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................TCATCAATAAAAACAACGTAATAGT............................................................................	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
....GAGCCTCACTCTTGGCGA............................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...............TTGGCGATAAAATCTTTATATACAGAGA.......................................................................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................CAATAGTAGAGG-GTG-TGATTGGC..........................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCGGAATGGACTACAAACAAAGGTT.......	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................CACAG-ACATCGGAATGGACTACAAACA.............	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAG-ACATCGGAATGGACTACAAA...............	23	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................TGATTGGCCCACAG-ACATCGGAATGG.......................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCGGAATGGACTACAAACAAAGGTCTC.....	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................G-ACATCGGAATGGACTACA.................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................TAGTTTTTATTATCAATAGTAGAGG-......................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................TTTATTATCAATAGTAGAGG-GTG-TGAA..............................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CGGAATGGACTACAAACAAAGGTCTC.....	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................ACAGTAATGTGTGTATTCATCAATA............................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................CAATAGTAGAGG-GTG-TGATTGG...........................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATTATCAATAGTAGAGG-GTG-TGA...............................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................TTATTATCAATAGTAGAGG-GTG-TGAT..............................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................TG-TGATTGGCCCACAG-ACATCGGA...........................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAG-ACATCGGAATGGACTACAAACA.............	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

---------------TTTGCAATAACTTCTATAAATATTTTGCAAAGATCTGTTTT------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dmo_272

scaffold_6461:1195-1285 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-24.3	-24.3	-24.2