ID:

dmo_265

 Coordinate:

scaffold_6498:83417-83486 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.3 -14.3 -14.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Jockey-2_DYaLINEJockey+

Sense Strand Reads

GGCCGTGTGTCTGCGGGCGTGCCACAGGGCAGCGTTATGGGCCCCATTTTGTACACTATCTTCTCCTCGGATATGCCACTGCCTTCCCAAGAGCATACGAATCGGATTGGACTGCCACAAGAGGAAATGCTGCTGTCCACTTTTGCCGACGACACGGTCATCATGAGCGC
***********************************..(((((.(((.((((.....(((...(((...(((...((....))..)))...))).))).....)))).)))...))).))...............************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
 V049
head
.......................................................CTATCTTCTCCTCGGACC................................................................................................. 18 2 2 32.00 64 0 64 0 0 0 0
................................................................................................ACGAATCGGATTGGACTGCCACA................................................... 23 0 1 14.00 14 14 0 0 0 0 0
......................................................ACGATCTTCTCCTCGGACC................................................................................................. 19 3 14 12.50 175 0 175 0 0 0 0
................................................................................................ACGAATCGGATTGGACTGCCACAAG................................................. 25 0 1 12.00 12 10 0 2 0 0 0
................................................................................................ACGAATCGGATTGGACTGCCAC.................................................... 22 0 1 9.00 9 6 3 0 0 0 0
..................................................GTACACTATCTTCTCCTCGGATAT................................................................................................ 24 0 1 8.00 8 6 2 0 0 0 0
..................................................GTACACTATCTTCTCCTCGGATA................................................................................................. 23 0 1 8.00 8 7 1 0 0 0 0
..................................................GTACACTATCTTCTCCTCGGATATGC.............................................................................................. 26 0 1 7.00 7 6 1 0 0 0 0
................................................................................................ACGAATCGGATTGGACTGCCACAA.................................................. 24 0 1 7.00 7 5 1 1 0 0 0
.....................................................GACTATCTTCTCCTCGGACC................................................................................................. 20 3 2 5.50 11 0 11 0 0 0 0
................................................................................................ACGAATCGGATTGGACTGCCACAAGA................................................ 26 0 1 5.00 5 5 0 0 0 0 0
..................................................GTACACTATCTTCTCCTCGGATATG............................................................................................... 25 0 1 5.00 5 4 1 0 0 0 0
................................................................................................ACGAATCGGATTGGACTGCCACAAGAGG.............................................. 28 0 1 3.00 3 1 0 2 0 0 0
................................................................................................ACGAATCGGATTGGACTGCCA..................................................... 21 0 1 3.00 3 3 0 0 0 0 0
...................................................TACACTATCTTCTCCTCGGATAT................................................................................................ 23 0 1 3.00 3 3 0 0 0 0 0
.................................................................................................CGAATCGGATTGGACTGCCACA................................................... 22 0 1 3.00 3 3 0 0 0 0 0
.....................................................CACGATCTTCTCCTCGGACC................................................................................................. 20 3 4 2.50 10 0 10 0 0 0 0
.............................................................TCTCCTCGGATATGCCACTGCCTTC.................................................................................... 25 0 1 2.00 2 1 0 0 1 0 0
................................................................................................ACGAATCGGATTGGACTGCCACAAGAG............................................... 27 0 1 2.00 2 1 0 1 0 0 0
................................................................................................ACGAATCGGATTGGACTGCC...................................................... 20 0 1 2.00 2 1 0 1 0 0 0
................................................................................................ACGAATCGGATTGGACTGAC...................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................TCCACTTTTGCCGACGACACG.............. 21 0 1 1.00 1 1 0 0 0 0 0
..................................................GTATACTATCTTCTCCTCGGATATGC.............................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................TGCTGTCCACTTTTGCCGACGACACGG............. 27 0 1 1.00 1 1 0 0 0 0 0
..................................................GTACACTATCTTCTCCTCGGATATGCCA............................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0
.....................CCACAGGGCAGCGTTATGGGCCC.............................................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0
..................................................GTACACTATCTTCTCCTCGG.................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
....................................................ACACTATCTTCTCCTCGGATATGC.............................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
...............................................................................TGCCTTCCCAAGAGCATACGAATCGG................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................CGAATCGGATTGGACTGCCACAAGAGG.............................................. 27 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................TCCACTTTTGCCGACGACACGGTCATC........ 27 0 1 1.00 1 1 0 0 0 0 0
..................................................GTACACTATCTTCTCCTCGGATATGCC............................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................CGAATCGGATTGGACTGCC...................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................AGATCGGACTGCCACAACAGG.............................................. 21 3 1 1.00 1 0 0 0 0 1 0
...................................................................................................AATCGGATTGGACTGCCACAAGAGG.............................................. 25 0 1 1.00 1 1 0 0 0 0 0
..................................................GTACACTATCTTCTCCTCGGATATGCCAC........................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
....GTGTGTCTGCGGGCGTGCCACAGGTC............................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
................................................................................................ACGAATCGGATTGGACTACCACAA.................................................. 24 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................CGAATCGGATTGGACTGCCACAA.................................................. 23 0 1 1.00 1 1 0 0 0 0 0
......................................................ACTATCTTCTCCTCGGATATGCCAC........................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...................................................TACACTATCTTCTCCTCGGATATGCCAC........................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..................................................GTACACTATCTTCTCCTCGGA................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.......TGTCTGCGGGCGTGCCACAGGGCAGCG........................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................GACGACACGGTCATCATGAGC.. 21 0 1 1.00 1 1 0 0 0 0 0
.....TGTGTCTGCGGGCGTGCCACAGGGC............................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.................................................GGTACACTATCTTCTCCTCGGATAT................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
....................................................ACACTATCTTCTCCTCGGATATG............................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
................................................................................................ACGAATCGGATTGGACTGCCACAAA................................................. 25 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................TGCTGCTGTCCACTTTTGCCGACGA.................. 25 0 1 1.00 1 1 0 0 0 0 0
...................................................TACACTATCTTCTCCTCGGAT.................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
......................................................ACTATCTTCTCCTCGGACC................................................................................................. 19 2 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................TTCGCGGACGACACGGACATCATG..... 24 3 1 1.00 1 1 0 0 0 0 0
.................................................................................................CGAATCGGATTGGACTGC....................................................... 18 0 1 1.00 1 1 0 0 0 0 0
........................................................TATCTTCTCCTCGGACCTTCC............................................................................................. 21 3 2 0.50 1 0 1 0 0 0 0
...CGTGTGTCTGCGGGCGTCCA................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0
.......................................................CTATTTTCTCCTCGGACA................................................................................................. 18 2 5 0.40 2 0 2 0 0 0 0
.....................................................CTCTATCTTCTCCTCGGACC................................................................................................. 20 3 3 0.33 1 0 1 0 0 0 0
.....................................................GACTATTTTCTCCTCGGATC................................................................................................. 20 3 3 0.33 1 0 1 0 0 0 0
.............CGGGAGTACCACAGGGCAGC......................................................................................................................................... 20 2 3 0.33 1 0 0 1 0 0 0
......................................................TCTATCTTCTCCTCGGACC................................................................................................. 19 3 11 0.27 3 0 3 0 0 0 0
.....................................................GACGATCTTCTCCTCGGATC................................................................................................. 20 3 4 0.25 1 0 1 0 0 0 0
.......................................................CTATTTTCTCCTCGGATC................................................................................................. 18 2 4 0.25 1 0 1 0 0 0 0
......................................................ATTATCTTCTCCTCGGACC................................................................................................. 19 3 15 0.20 3 0 3 0 0 0 0
.......................................................................................................TGATTGGACTACCACAAAAGG.............................................. 21 3 5 0.20 1 0 0 0 0 0 1
.........................................................ATCTTCTCCTCGGACCTTCC............................................................................................. 20 3 5 0.20 1 0 1 0 0 0 0
....................................................................................................ATCGGAGTGGTCTGCCAC.................................................... 18 2 6 0.17 1 0 1 0 0 0 0
.........................................................ATCTTCTCCTCGGACCTCCC............................................................................................. 20 3 6 0.17 1 0 1 0 0 0 0
.....................................................GACGATCTTCTCCTCGGAC.................................................................................................. 19 3 19 0.16 3 0 3 0 0 0 0
......................................................ACGATCTTCTCCTCGGAC.................................................................................................. 18 2 7 0.14 1 0 1 0 0 0 0
.....................................................CATTATCTTCTCCTCGGACC................................................................................................. 20 3 8 0.13 1 0 1 0 0 0 0
.....................................................CTCTATTTTCTCCTCGGATC................................................................................................. 20 3 10 0.10 1 0 1 0 0 0 0
.................................................................................................CTAATCGGATTGGACTGGCT..................................................... 20 3 12 0.08 1 1 0 0 0 0 0
..........................................................TGTTCTCCTCGGACATCCC............................................................................................. 19 3 14 0.07 1 0 1 0 0 0 0
......................................................AGTATCTTCTCCTCGGACC................................................................................................. 19 3 16 0.06 1 0 1 0 0 0 0
.........................................................ATCTTCTCCTCGGACCTCC.............................................................................................. 19 3 17 0.06 1 0 1 0 0 0 0
.............................................................TATCCTCGGATATGGCCCT.......................................................................................... 19 3 19 0.05 1 1 0 0 0 0 0
.......................................................CTATCTACTCCTCGGACC................................................................................................. 18 3 19 0.05 1 0 1 0 0 0 0
.......................................................CTATCTTCTCCTAGGACC................................................................................................. 18 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

CCGGCACACAGACGCCCGCACGGTGTCCCGTCGCAATACCCGGGGTAAAACATGTGATAGAAGAGGAGCCTATACGGTGACGGAAGGGTTCTCGTATGCTTAGCCTAACCTGACGGTGTTCTCCTTTACGACGACAGGTGAAAACGGCTGCTGTGCCAGTAGTACTCGCG
************************************..(((((.(((.((((.....(((...(((...(((...((....))..)))...))).))).....)))).)))...))).))...............*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
 V056
head
.................................................................................GGAAGGGTTCTCGTATGCTTAGCCT................................................................ 25 0 1 124.00 124 105 8 11 0 0 0
..................................................................................GAAGGGTTCTCGTATGCTTAGCCT................................................................ 24 0 1 51.00 51 41 5 5 0 0 0
................................................................................CGGAAGGGTTCTCGTATGCTTAGCCT................................................................ 26 0 1 49.00 49 33 10 6 0 0 0
..............................................................................GACGGAAGGGTTCTCGTATGCTTAGCCT................................................................ 28 0 1 31.00 31 30 1 0 0 0 0
...............................................................................ACGGAAGGGTTCTCGTATGCTTAGCCT................................................................ 27 0 1 24.00 24 24 0 0 0 0 0
........................................................................................................................................GGTGAAAACGGCTGCTGTGCCAGTAGT....... 27 0 1 20.00 20 20 0 0 0 0 0
...................................ATACCCGGGGTAAAACATGTGATAG.............................................................................................................. 25 0 1 14.00 14 9 3 2 0 0 0
.................................................................................GGAAGGGTTCTCGTATGCTTAGCC................................................................. 24 0 1 12.00 12 12 0 0 0 0 0
...............................................................................................................GACGGTGTTCTCCTTTACGACGACAGGT............................... 28 0 1 11.00 11 9 2 0 0 0 0
...............................................................................................................................................ACGGCTGCTGTGCCAGTAGTACT.... 23 0 1 10.00 10 10 0 0 0 0 0
CCGGCACACAGACGCCCGCACGGTGT................................................................................................................................................ 26 0 1 6.00 6 5 1 0 0 0 0
..................................AATACCCGGGGTAAAACATGTGATAG.............................................................................................................. 26 0 1 6.00 6 6 0 0 0 0 0
....................................TACCCGGGGTAAAACATGTGATAG.............................................................................................................. 24 0 1 6.00 6 5 1 0 0 0 0
.........................................GGGGTAAAACATGTGATAG.............................................................................................................. 19 0 1 5.00 5 4 0 1 0 0 0
....................................................................................AGGGTTCTCGTATGCTTAGCCT................................................................ 22 0 1 5.00 5 5 0 0 0 0 0
..............................................................................................................................................AACGGCTGCTGTGCCAGTAGTACT.... 24 0 1 5.00 5 4 1 0 0 0 0
.................................................................................................................CGGTGTTCTCCTTTACGACGACAGGT............................... 26 0 1 5.00 5 4 1 0 0 0 0
..............................................................................GACGGAAGGGTTCTCGTATGCTTAGCC................................................................. 27 0 1 4.00 4 4 0 0 0 0 0
.....................................................................................GGGTTCTCGTATGCTTAGCCT................................................................ 21 0 1 4.00 4 4 0 0 0 0 0
.....ACACAGACGCCCGCACGGTGTCCCGT........................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0 0
...........................................................................................................................................GAAAACGGCTGCTGTGCCAGTAGTACT.... 27 0 1 3.00 3 3 0 0 0 0 0
......................................CCCGGGGTAAAACATGTGATAG.............................................................................................................. 22 0 1 3.00 3 1 1 1 0 0 0
..............................................................................................................................TACGACGACAGGTGAAAACGGCTGCT.................. 26 0 1 3.00 3 3 0 0 0 0 0
.........................................................................................................................................GTGAAAACGGCTGCTGTGCCAGTAGT....... 26 0 1 3.00 3 1 0 1 1 0 0
................................................................................................................................................CGGCTGCTGTGCCAGTAGTACT.... 22 0 1 3.00 3 3 0 0 0 0 0
................................................................................................................ACGGTGTTCTCCTTTACGACGACAGGT............................... 27 0 1 3.00 3 2 0 1 0 0 0
.CGGCACACAGACGCCCGCACGGTGT................................................................................................................................................ 25 0 1 3.00 3 2 1 0 0 0 0
........................................................................................................................................GGTGAAAACGGCTGCTGTGCCAGTAG........ 26 0 1 3.00 3 3 0 0 0 0 0
...................................................................................AAGGGTTCTCGTATGCTTAGCCT................................................................ 23 0 1 2.00 2 2 0 0 0 0 0
.....................................ACCCGGGGTAAAACATGTGATAG.............................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0
......................................CCCGGGGTAAAACATGTGATGG.............................................................................................................. 22 1 1 2.00 2 0 2 0 0 0 0
.........................................GGGGTAAAACATGTGATAGAA............................................................................................................ 21 0 1 2.00 2 1 0 0 0 0 1
.....................................................................................GGGTTCTCGTATGCTTAGCCTAACCT........................................................... 26 0 1 2.00 2 2 0 0 0 0 0
..................................................................................GAAGGGTTCTCGTATGCTTAGCC................................................................. 23 0 1 2.00 2 2 0 0 0 0 0
...............................................................................ACGGAAGGGTTCTCGTATGCTTAGCC................................................................. 26 0 1 2.00 2 2 0 0 0 0 0
.....................................................................................................AGCCTAACCTGACGGTGTTCTCCTT............................................ 25 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................................................................GAAAACGGCTGCTGTGCCAGTAGT....... 24 0 1 2.00 2 2 0 0 0 0 0
..................................................................................................................GGTGTTCTCCTTTACGACGACAGGT............................... 25 0 1 2.00 2 2 0 0 0 0 0
......................................TCCGGGGTAAAACATGTGATAG.............................................................................................................. 22 1 1 2.00 2 1 1 0 0 0 0
.................................CAATACCCGGGGTAAAACATGTGATAG.............................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0
................................GCAATACCCGGGGTAAAACATGTGATAG.............................................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0
...................................ATACCCGGGGTAAAACATGTGATAGA............................................................................................................. 26 0 1 2.00 2 0 0 0 2 0 0
................................................................................CGGAAGGGTTCTCGTATGCTTAGCC................................................................. 25 0 1 2.00 2 2 0 0 0 0 0
......CACAGACGCCCGCACGGTGTCCCGT........................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0
..................................................................................TAATGGTTCTCTTATGCTTAGCCT................................................................ 24 3 1 1.00 1 0 0 0 0 1 0
....................................TACCCGGGGTAAAACATGTGATAGAA............................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0
...............................................................................ACGGAAGGGTTCTCGTATGCTTAGC.................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
..........................................GGGTAAAACATGTGATAG.............................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................TGAAAACGGCTGCTGTGCCAGTAGT....... 25 0 1 1.00 1 1 0 0 0 0 0
.........................................GGGGTAAAACATGTGATAGA............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................CTGACGGTGTTCTCCTTTACGACGACA.................................. 27 0 1 1.00 1 0 1 0 0 0 0
........................................CGGGGTAAAACATGTGATAG.............................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................CTCCTTTACGACGACAGGTGAAAAC......................... 25 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................GGTGTTCTCCTTTACGACGACAGGTG.............................. 26 0 1 1.00 1 1 0 0 0 0 0
..................CACGGTGTCCCGTCGCAATAC................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.................................TTATACCCGGGGTAAAACATGTGATAG.............................................................................................................. 27 2 1 1.00 1 0 1 0 0 0 0
...................................TTACCCGGGGTAAAACATGTGATA............................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.........................................GGGGTAAAACATGTGATA............................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.........................................CGGGTAAAACATGTGATAG.............................................................................................................. 19 1 1 1.00 1 0 0 1 0 0 0
...................................ATACCCAGGGTAAAACATGTGATAG.............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................AGCCTAACCTGACGGTGTTCTCCTTT........................................... 26 0 1 1.00 1 1 0 0 0 0 0
..............................................................GAGGAGCCTATACGGTGACGGAAGGGT................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
...........................................................................GGTGACGGAAGGGTTCTCGTATGCT...................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
....CACACAGACGCCCGCACGGTGTCCCGT........................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................TCGGTGTTCTCCTTTACGACGACAGGT............................... 27 1 1 1.00 1 1 0 0 0 0 0
.................GCACGGTGTCCCGTCGCAATACC.................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
..................................AATACCCGGGGTAAAACATGTGATAGA............................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0
......................................CCCGGGGTAAAACATGTGATAGAA............................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0
..................................AATACCCGGGGTAAAACATGGG.................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................ACAGGTGAAAACGGCTGCTGTGCCA............ 25 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................TACGGCTGCTGTGCCAGTAGTACT.... 24 1 1 1.00 1 1 0 0 0 0 0
..................................CATACCCGGGGTAAAACATGTGATA............................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................ACGGTGTTCTCCTTTACGACGACAGG................................ 26 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................GACGGTGTTCTCCTTTACGACGACAGG................................ 27 0 1 1.00 1 1 0 0 0 0 0
.................................................................................GGAAGGGTTCCCGTATGCTTAGCCT................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
......................................................................................GGTTCTCGTATGCTTAGCCTAAC............................................................. 23 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................TTTACGACGACAGGTGAAAAC......................... 21 0 1 1.00 1 1 0 0 0 0 0
.....................GGTGTCCCGTCGCAATACCCGGGGT............................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................................GGAAGGGTTCTCGTATGCTTAGGCT................................................................ 25 1 1 1.00 1 0 1 0 0 0 0
................................................................................................................TTAGTGTTCTCCTTTACGACGACAGGT............................... 27 3 1 1.00 1 1 0 0 0 0 0
............................................................................................................CCTGACGGTGTTCTCCTTTACGACGA.................................... 26 0 1 1.00 1 1 0 0 0 0 0
..............................................................................GACGGAAGGGTTCTCGTATGCTTAGCGT................................................................ 28 1 1 1.00 1 0 1 0 0 0 0
...........................................GGTAAAACATGTGATAGA............................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
CCGGCACACAGACGCCCGCACGGT.................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
.................................................................................GGAAGGGTTCTCGTATGCTTAGCCTT............................................................... 26 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................GGCTGCTGTGCCAGTAGTACT.... 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................................AACGGAAGGGTTCTCGTATGCTTAGCCT................................................................ 28 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................CTGACGGTGTTCTCCTTTACGAC...................................... 23 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................GGTGAAAACGGCTGCTGTGCCAGTA......... 25 0 1 1.00 1 1 0 0 0 0 0
.....................................ACCCGGGGTAAAACATGTGATAGAA............................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................CGACAGGTGAAAACGGCTGCTGTGCC............. 26 0 1 1.00 1 1 0 0 0 0 0
..................................................................................GAGGGTTTCTCGTATGCTTAGCCT................................................................ 24 2 1 1.00 1 0 1 0 0 0 0
..................................................................................GAAGGGTTCTCGCATGCTTAGCCT................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
......................................................................................GGTTCTCGTATGCTTAGCCTAACC............................................................ 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................................GGAAGGGTTCTCGTATGCTTAGCCTTG.............................................................. 27 2 1 1.00 1 1 0 0 0 0 0
.................................................................................GGAAGGGTTCTCGTATGCTTAGCCA................................................................ 25 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CGTATGCTTAGCCTAACCTGACGGT..................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................ATGCTTAGCCTAACCTGACGGTGTT.................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................AAACGGCTGCTGTGCCAGTAGTACT.... 25 0 1 1.00 1 1 0 0 0 0 0
............CGCCCGCACGGTGTCCCGTCGCAAT..................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
....................................TACCCGGGGTAAAACATGTGATA............................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.................................................................................GGAAGGGTTCTCGTATGCTTAGCCTA............................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................ACCTGACGGTGTTCTCCTT............................................ 19 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................GAAAACGGCTGTTGTGCCAGTAGTACT.... 27 1 1 1.00 1 0 1 0 0 0 0
................................GCAATACCCGGGGTAAAACATGTGAT................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
.CGGCACACAGACGCCCGCACGTT.................................................................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0
...................................................................................AAGGGTTCTCGTATGCTTAGCCTAAC............................................................. 26 0 1 1.00 1 1 0 0 0 0 0
................................................................................CGGAAGGTTTCTCGTATGCTTAGCCT................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
....................................................................CCTATACGGTGACGGAAGGGTTCTCGT........................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................TGAAAACGGCTGCTGTGCCAGTAGTACT.... 28 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................GCTGCTGTGCCAGTAGTACTC... 21 0 1 1.00 1 1 0 0 0 0 0
.........AGACGCCCGCACGGTGTCCCGT........................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................CTGTGTTCTCCTTTACGACGACAGTT............................... 26 2 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................CAGGTGAAAACGGCTGCTGTGCCAGTAGT....... 29 0 1 1.00 1 0 1 0 0 0 0
................................................................................CGGAAGGGTTCTCTTATGCTTAGCCT................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................GTGAAAACGGCTGCTGTGCCAGTA......... 24 0 1 1.00 1 1 0 0 0 0 0
..........................................GGGTAAAACATGTGATAGAA............................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0
................................................................................CGGAAGGGTTCTCGTATGCTTATCCT................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
..............................................................................GACGGAAGGGTTCTTGTATGCTTAGCCT................................................................ 28 1 1 1.00 1 1 0 0 0 0 0
...............................................................................ACGGAAGGGTTCTCGTATG........................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................CGACGACAGGTGAAAACGGCTGCTGTGA.............. 28 1 1 1.00 1 1 0 0 0 0 0
...............................................................................CCGGAAGGGTTCTCGTATGCTTAGCCT................................................................ 27 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................GACGACAGGTGAAAACGGCTGCT.................. 23 0 1 1.00 1 1 0 0 0 0 0
CCGGCACACAGACGCCCGCACGGTCT................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................TTACGACGACAGGTGAAAACGGCTGCT.................. 27 0 1 1.00 1 0 0 1 0 0 0
..................................AATACCCGGGGTAAAACATGTGATAGAA............................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0
.....................................ACCCGGGGTAAAACATGTGATAGA............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
................................................................................CGGAAGGGTTCTCGTATGCTTTGCCT................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
..............................................................................TACGGAAGGGTTCTCGTATGCTTAGCCT................................................................ 28 1 1 1.00 1 1 0 0 0 0 0
...GCACACAGACGCCCGCACGGTGTCCCGT........................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
....................................................................CCTATACGGTGACGGAAGGGTTCT.............................................................................. 24 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................GAAAACGGCTGCTGTGCCAGTAGTAC..... 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................GGTTCTCGTATGCTTAGCCT................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................ACGACGACAGGTGAAAACGGCTGCT.................. 25 0 1 1.00 1 1 0 0 0 0 0
................................................................................CGGAAGGGTTCTCGTATGCTTAGACT................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
..............................................................................GACGGAAGGGTTCTCGTATGCTTAGC.................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................GTTCTCGTATGCTTAGCCT................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
CCGGCACACAGACGCCCGCACGG................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..................................................................................GACGGGTTCTCGTATGCTTAGCCT................................................................ 24 1 1 1.00 1 0 0 0 1 0 0
....................................................................CCTATACGGTGACGGAAGGGTTCTCG............................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................ACCTGACGGTGTTCTCCTTTACGACG..................................... 26 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................CTGCTGTGCCAGTAGTACT.... 19 0 1 1.00 1 1 0 0 0 0 0
..............................................................................GACGGAAGGGTTCTCGTATGCTTAGCCTT............................................................... 29 1 1 1.00 1 1 0 0 0 0 0
.....................................................................CTATTGGGTGAAGGAAGGGTT................................................................................ 21 3 2 0.50 1 0 0 1 0 0 0
.........................................................................GCGGTGACGGAAGGGATC............................................................................... 18 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................................CTTTACGACGACAGGTGCAA........................... 20 1 5 0.20 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:83367-83536 + dmo_265 GGCCGTGTGTCTGCGGGCGTGCCACAGGGCAGCGTTATGGGCCCCATTTTGTACACTATCTTCTCCTCGGATATGCCACTGCCTTCCCAAGAGCATAC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAAGAGGA---AATGCTGCTGTCCACTTTTGCCGACGACACGGTCATCAT-GA-----GCGC
droVir3 scaffold_12958:1546613-1546770 - AAACTCATCCGTGCCGGCGTTCCCCAGGGCAGCGTTCTGGGACCAGTTTTGTACAGCATCTACTCATCCGACATGCCGGTACCGCAAACTCAAATTGG-------------------------------TGAT----G-----G-TCA--GAAGGG---CATGCTCCTGGCGACCTATGCTGACGACACGACCATCAT-GT-----CGGC
droGri2 scaffold_8309:4443-4618 + GGCATAATCTGTGCTGGGGTACCACAGGGCAGCGCGCTTGGTCCTATCCTCTACACCATCTCCTCGTCGGATATGCCGCTCCCATCGCTGATCAGAGC--TG-A----GC----AACTG--TCTGCCTTCCCA----A-----G-TGA--TTGCGC---TATGCTTTTGTCGACGTACGCGGATGACACTATTGTCTT-AT-----GTGC
droWil2 scf2_1100000004884:898140-898302 - CGCAGTGTGAATGCCGGTGTTCCGCAGGGCAGTGTTCTTGGGCCGATCTTATACACCAACTACACAGCCGACATACCTAAGCCCAACGATGAACTTAG-------------------------------TACA----A-----T-CGA--AACAGA---CATGCTCTTGGCAGCGTTTGCCGACGACACTGCTGTGTT-GGTAAGATCAC
dp5 Unknown_group_14:3027-3199 + GGAAAAATATCAGCTGGAGTCCCACAGGGCAGTGTTCTTGGACCAATATTATACACAATCTATGCCTCAGACATGCCAATGCCTTACCTCATCCCTGACAG-C------------ACTG--GCTTCCA--TCC----A-----GAACG--GGAATC---AATGCTGCTGTCCACGTATGCCGATGACACGGTGATAAT-GA-----GCGC
droPer2 scaffold_59:801-973 + GGGAAAATATCAGCTGGAGTCCCACAGGGCAGTGTTCTTGGACCAATATTATACACAATCTATGCCTCAGACATGCCAATGCCTCACCTCATCCCGGACAG-C------------ACTG--GCTTCCA--TCC----A-----GAACG--GGAATC---AATGCTGCTGTCCACGTATGCCGACGACACGGTGATAAT-GA-----GCGC
droAna3 scaffold_3884:7466-7641 - GGAATTATCAAGGCAGGAGTGCCTCAAGGAAGCATCCTGGGCCCAATCCTCTACCTCATATTCACCTCTGACATGCCTCTCCCTGACATTGTTCCCAGCAT-TGCTAGG------------AGCAATACCCAC----A-----G-C--CCGGGAAA---TTTTCTCCTCTCCACCTATGCGGATGACACGGCCATCCT-GT-----ACAA
droBip1 scf7180000391645:35838-35982 + ------ATCTCTGCTGGTGTTCCCCAAGGCAGCGTCCTCGGCCCTACTCTATATTCTATCTACGCTTCAGATATGCCTACAAAAA---CTTTAATCAC-------------------------------TGAA----G-----T-GAA--GCAAGA---CGTGCTAATTGCCACCTACGCTGATGGCACTGCTGTCCT-GA---------
droKik1 scf7180000302707:20660-20831 - GGGAAGATAAAAGCAGGTGTCCCCCAGGGCAGTGTACTGGGCCCCATATTATATAAC----ACACGTCTGACATACCACTGCCTCACCTCAAAGGCCA--AA-ACTATGAATACA----TCTC------CAAC----C-----C-C--TTCACGGA---CATAATACTATCTACATATGCCGACGATACAATAATAAT-GT-----GCGC
droFic1 scf7180000449483:629-804 - GGAAAAATCACCGCTGGGGTCCCGCAAGGCAGTGTCCTTGGGCCCATTTTATATACCATCTACACTTCGGATATTCCACTCCCCAGAATAATCGGCCC--AG-AATACTCCTACA----ACAG------TGAG----C-----C-T--TTTGAGAA---TATGCTCTTGTCCACATATGCTGATGATACTATTATCAT-GT-----GCGC
droEle1 scf7180000486854:2084-2250 + GGTAATATTGCCGCGGGTGTCCCTCAAGGCAGTGTTCCAGGGCCCATTCTTTACACGATCTTCACTGCTGACATGCCGCTTCTTTCTTCTGTCGGCCG--G--------------------ACCTTTT--TAC----T-----GAGC-TCGCTATC---TATGTTACTCTCAACCTATGCATACGACACTGTTATTAT-GC-----GTAC
droRho1 scf7180000779479:501945-502102 - CGTCCTATCTCTGCTGGCGTACCTCAAGGCAGTGTACTGGGCCCGACTCTCTACTCACTGTACACTTCAGATATGCCTGATTCCTGGGAATGTTCAAA-----A----------------G--------T--T----G-----A-CGA--GGATAA---CATGCTCATAGCTACGTATGCCGACGACACTGCTGTAAT-GG-----TCAG
droBia1 scf7180000302429:82110-82267 + GCC---ATTGCAGCTGGCGTCCCCCAAGGAAGCGTCTTAGGACCGCTACTGTACTCCATCTTTACAGCAGACATCCCCAAGCCAAGCTATGAAGA-AA---------------------TGACC-----TACG----A-----C-A--A-CAGCAA---AATGCTGCTGGCCAGCTTCGCTGACGACGTCTGCTTTCT-CA-----GCTC
droTak1 scf7180000411384:968-1143 - GGTAAAATGACTGCGGGCGTTCCTCAAGGCAGTGTTCTAGGGCCTATTCTCTACACGATTTACACTGCCGACATGCCGCTTCCTACTTCTGTCGGACG--GAC------------ACTT--TT-------TACTGAGCAAGCTGACCA--TAAATC---CATGCTACTTTCAACTTATGCAGACGACGCTGTCATTAT-GT-----GTAC
droEug1 scf7180000405613:12539-12688 - GCACACATTCATGCAGGAGTGCCCCAAGGAAGTGTACTTGGTCCGATTTTGTACACTATATATACCAGTGACATGCCAGTTCCTCTGCCGACTACAG-------------------------------------------------------ATGCCCGTCTGCTTATGGCTACTTATGCCGACGACACGGCCATCCTTGC-----GTCC
dm3 chrUextra:215321-215478 + GGACAAATAGGCGCAGGGGTGCCCCAAGGAAGCAACCTTGGACCCATACTGTACTCTATCTTCTCCTCAGACATGCCACTCCCACACATATACCACCC-------------------------------CTCC----C-----C-A--ACAGAAAG---AATTATGCTCTCAACATACGCAGACGACACTATAGTACT-CA-----GCTC
droSim2 node_125371:156-313 - GGACAAATAGGCGCAGGAGTGCCTCAAGGAAGCAATCTCGGACCACTACTTTACTCTATCTTCTCCTCTGACATGCCCCTCCCATATATCTACCGCCC-------------------------------TTCA----C-----C-A--ACACAAAG---AATTATGCTCTCAACATACGCAGACGACACTATAGTCCT-CA-----GCTC
droSec2 scaffold_2134:78-235 + GGACAAATAGGCGCAGGTGTGCCTCAAGGAAGCAATCTTGGACCACTACTTTACTCTATCTTCTCTTCAGACATGCCTCTTCCACATAGCTACCGCCC-------------------------------CTCA----C-----C-A--ACAGAAAG---AATTATGCTTTCAACATACGCAGACGACACTATGATCCT-TA-----GCTC
droYak3 v2_chrUn_6493:6178-6335 - GGACAAATAGGTGCTGGTGTGCCTCAGGGAAGCAACCTGGGCCCCATACTGTACTCAATCTTCTCTTCAGACATGCCTATCCCTAGAACATACAGCGT-------------------------------CTCA----C-----C-A--ACAGGAGA---AATGCTGCTGTCAACGTATGCAGATGACACAGTAGTCCT-CA-----GCAC
droEre2 scaffold_4793:22449-22606 - GGCCAAATAGGCGCTGGCGTGCCTCAAGGAGGTAACCTGGGCCCCCTATTGTACTCAATATTCTCCTCAGACATGCCTATTCCAAAGATACACAGCCC-------------------------------CTCA----C-----A-A--ACAGGAGA---AATGCTGCTCTCAACCTACGCAGACGACACGATAGTCCT-TA-----GCTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGCCGTGTGTCTGCGGGCGTGCCACAGGGCAGCGTTATGGGCCCCATTTTGTACACTATCTTCTCCTCGGATATGCCACTGCCTTCCCAAGAGCATAC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAAGAGGA---AATGCTGCTGTCCACTTTTGCCGACGACACGGTCATCAT-GA-----GCGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................CTATCTTCTCCTCGGACC.........................................................................................................................................18232.00640000640
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CA............................................................23114.00141400000
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAAG..........................................................25112.00121000002
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--C.............................................................2219.009600030
..................................................GTACACTATCTTCTCCTCGGATAT........................................................................................................................................2418.008600020
..................................................GTACACTATCTTCTCCTCGGATA.........................................................................................................................................2318.008700010
..................................................GTACACTATCTTCTCCTCGGATATGC......................................................................................................................................2617.007600010
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAA...........................................................2417.007500011
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAAGA.........................................................2615.005500000
..................................................GTACACTATCTTCTCCTCGGATATG.......................................................................................................................................2515.005400010
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAAGAGG.......................................................2813.003100002
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--..............................................................2113.003300000
...................................................TACACTATCTTCTCCTCGGATAT........................................................................................................................................2313.003300000
.................................................................................................C-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CA............................................................2213.003300000
.............................................................TCTCCTCGGATATGCCACTGCCTTC............................................................................................................................2512.002110000
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAAGAG........................................................2712.002100001
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-.................................................................2012.002100001
.........................................................................................................................................................................TCCACTTTTGCCGACGACACG....................2111.001100000
....................................................................................................................................................................TGCTGTCCACTTTTGCCGACGACACGG...................2711.001100000
..................................................GTACACTATCTTCTCCTCGGATATGCCA....................................................................................................................................2811.001000001
.....................CCACAGGGCAGCGTTATGGGCCC......................................................................................................................................................................2311.001010000
..................................................GTACACTATCTTCTCCTCGG............................................................................................................................................2011.001100000
....................................................ACACTATCTTCTCCTCGGATATGC......................................................................................................................................2411.001000010
...............................................................................TGCCTTCCCAAGAGCATAC-----GAATCGG....................................................................................................2611.001100000
.................................................................................................C-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAAGAGG.......................................................2711.001100000
.........................................................................................................................................................................TCCACTTTTGCCGACGACACGGTCATC..............2711.001100000
..................................................GTACACTATCTTCTCCTCGGATATGCC.....................................................................................................................................2711.001100000
.................................................................................................C-----GAATCGGAT-------TGG-------ACTG----C-----C-.................................................................1911.001100000
........................................................................................................AATCGGAT-------TGG-------ACTG----C-----C-A--CAAGAGG.......................................................2511.001100000
..................................................GTACACTATCTTCTCCTCGGATATGCCAC...................................................................................................................................2911.001100000
.................................................................................................C-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAA...........................................................2311.001100000
......................................................ACTATCTTCTCCTCGGATATGCCAC...................................................................................................................................2511.001100000
...................................................TACACTATCTTCTCCTCGGATATGCCAC...................................................................................................................................2811.001100000
..................................................GTACACTATCTTCTCCTCGGA...........................................................................................................................................2111.001100000
.......TGTCTGCGGGCGTGCCACAGGGCAGCG................................................................................................................................................................................2711.001100000
.....................................................................................................................................................................................GACGACACGGTCATCAT-GA-----GC..2111.001100000
.....TGTGTCTGCGGGCGTGCCACAGGGC....................................................................................................................................................................................2511.001100000
....................................................ACACTATCTTCTCCTCGGATATG.......................................................................................................................................2311.001100000
................................................................................................AC-----GAATCGGAT-------TGG-------ACTG----C-----C-A--CAAA..........................................................2511.001100000
.................................................................................................................................................................TGCTGCTGTCCACTTTTGCCGACGA........................2511.001100000
...................................................TACACTATCTTCTCCTCGGAT..........................................................................................................................................2111.001100000
......................................................ACTATCTTCTCCTCGGACC.........................................................................................................................................1911.001000010
.................................................................................................C-----GAATCGGAT-------TGG-------ACTG----C-----...................................................................1811.001100000
droVir3
AAACTCATCCGTGCCGGCGTTCCCCAGGGCAGCGTTCTGGGACCAGTTTTGTACAGCATCTACTCATCCGACATGCCGGTACCGCAAACTCAAATTGG-------------------------------TGAT----G-----G-TCA--GAAGGG---CATGCTCCTGGCGACCTATGCTGACGACACGACCATCAT-GT-----CGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................CTCAAATTGG-------------------------------TGAT----G-----G-TC...............................................................1811.001100000000000000000000000000000000000000000000000000000000000000
droGri2
GGCATAATCTGTGCTGGGGTACCACAGGGCAGCGCGCTTGGTCCTATCCTCTACACCATCTCCTCGTCGGATATGCCGCTCCCATCGCTGATCAGAGC--TG-A----GC----AACTG--TCTGCCTTCCCA----A-----G-TGA--TTGCGC---TATGCTTTTGTCGACGTACGCGGATGACACTATTGTCTT-AT-----GTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CGCAGTGTGAATGCCGGTGTTCCGCAGGGCAGTGTTCTTGGGCCGATCTTATACACCAACTACACAGCCGACATACCTAAGCCCAACGATGAACTTAG-------------------------------TACA----A-----T-CGA--AACAGA---CATGCTCTTGGCAGCGTTTGCCGACGACACTGCTGTGTT-GGTAAGATCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................ACTTAG-------------------------------TACA----A-----T-CGA--AACAGA---CATGC..............................................2620.50101000
.........................................................................................TGAACTTAG-------------------------------TACA----A-----T-CGA--AACAGA---CATGC..............................................2920.50101000
dp5
GGAAAAATATCAGCTGGAGTCCCACAGGGCAGTGTTCTTGGACCAATATTATACACAATCTATGCCTCAGACATGCCAATGCCTTACCTCATCCCTGACAG-C------------ACTG--GCTTCCA--TCC----A-----GAACG--GGAATC---AATGCTGCTGTCCACGTATGCCGATGACACGGTGATAAT-GA-----GCGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................ACACAATCTATGCCTCAGACATGC......................................................................................................................................24226.005204051000510
....................................................................................TACCTCATCCCTGACAG-C------------ACTG--GCT......................................................................................25225.005004710000200
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCACG...................................24216.003203100001000
.......................................................................................................................................................................TGTCCACGTATGCCGATGACACG....................23211.502302300000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCAC....................................23211.002201830100000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCC......................................21310.333102060500000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCA.....................................22310.003002800200000
...............................................................................TGCCTTACCTCATCCCTGACAG-C------------AC.............................................................................................2529.501901900000000
....................................................................................TACCTCATCCCTGACAG-C------------ACTG--GC.......................................................................................2428.001601510000000
....................................................ACACAATCTATGCCTCAGACATGCC.....................................................................................................................................2526.00120831000000
....................................................ACACAATCTATGCCTCAGACATG.......................................................................................................................................2326.00120901000200
.......................................................................................................................................................................TGTCCACGTATGCCGATGACAC.....................2224.5090900000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCACA...................................2424.5090900000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATGC..............................................2433.67110910100000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTG.........................................2533.671101010000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCACGT..................................2523.5070700000000
....................................................ACACAATCTATGCCTCAGACATGCCA....................................................................................................................................2623.5070500000200
.......................................................................................................................................................................TGTCCACGTATGCCGATGACACGG...................2423.5070700000000
........................................................................................TCATCCCTGACAG-C------------ACTG--GCTTCCA--................................................................................2523.0060600000000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTG............................................2233.0090900000000
...................TCCCACAGGGCAGTGTTCTTGGACC......................................................................................................................................................................2523.0060600000000
....................................................................................TACCTCATCCCTGACAG-C------------ACTG--GCTTCC...................................................................................2823.0060510000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATGCTGC...........................................2733.0090700000200
...................TCCCACAGGGCAGTGTTCTTGGACCAA....................................................................................................................................................................2722.5050500000000
....................................................................................TACCTCATCCCTGACAG-C------------ACTG--G........................................................................................2322.5050400000010
...................TCCCACAGGGCAGTGTTCTTGGAC.......................................................................................................................................................................2422.5050410000000
....................................................................................TACCTCATCCCTGACAG-C------------ACTG--.........................................................................................2222.0040400000000
................................................TTATACACAATCTATGCCTCAGAC..........................................................................................................................................2422.0040400000000
.....................................................................................ACCTCATCCCTGACAG-C------------ACTG--GCT......................................................................................2422.0040400000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTC.......................................2032.0060600000000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTGTC.......................................2132.0060320100000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGC...........................................2332.0060600000000
...................TCCCACAGGGCAGTGTTCTTGGACCA.....................................................................................................................................................................2622.0040310000000
....................................................................................TACCTCATCCCTGACAG-C------------ACTG--GCTTCCA--................................................................................2921.5030300000000
...............................................................................TGCCTTACCTCATCCCTGACAG-C------------...............................................................................................2321.5030300000000
................................................................................GCCTTACCTCATCCCTGACAG-C------------AC.............................................................................................2421.5030300000000
....................................................................................TACCTCATCCCTGACAG-C------------ACT............................................................................................2121.5030300000000
.......................................................................................................................................................................TGTCCACGTATGCCGATGACACGGTGA................2721.5030300000000
...................TCCCACAGGGCAGTGTTCTTG..........................................................................................................................................................................2121.5030300000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCACGTA.................................2621.5030210000000
....................................................ACACAATCTATGCCTCAGACATGCCAA...................................................................................................................................2721.5030210000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATG...............................................2331.3340400000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATGCTG............................................2631.3340400000000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTGTC.......................................2731.3340300001000
...................................................................................TTACCTCATCCCTGACAG-C------------ACTG--GCT......................................................................................2621.0020200000000
.......................................................................................................................................................................TGTCCACGTATGCCGATGACACGGT..................2521.0020200000000
.....................................................CACAATCTATGCCTCAGACATGCCA....................................................................................................................................2521.0020200000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCCAC....................................2221.0020200000000
........................................................................................................................................................................GTCCACGTATGCCGATGACACG....................2221.0020200000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCCACGTA.................................2521.0020200000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCACGA..................................2521.0020200000000
.......................................................................................................................................................GAATC---AATGCTGCTGTCCACGTAT................................2421.0020200000000
...................TCCCACAGGGCAGTGTTCTTGG.........................................................................................................................................................................2221.0020200000000
...................TCCCACAGGGCAGTGTTCTTGGACCAAT...................................................................................................................................................................2821.0020200000000
.......................................................................................................................................................................TGTCCACGTATGCCGATGAC.......................2021.0020200000000
.......................................................................................................................................................................TGTCCACGTATGCCGATGACA......................2121.0020200000000
..........................................................................................................................................................TC---AATGCTGCTGTCCACGTATGCCGA...........................2621.0020200000000
...................................................................................TTACCTCATCCCTGACAG-C------------ACTG--GC.......................................................................................2521.0020200000000
....................CCCACAGGGCAGTGTTCTTGGA........................................................................................................................................................................2221.0020200000000
..........................................................................................................................................................TC---AATGCTGCTGTCCACGTATG...............................2221.0020200000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCCACG...................................2321.0020200000000
...................TCCCACAGGGCAGTGTTCTTGGA........................................................................................................................................................................2321.0020200000000
.................................................................................................................................................................TGCTGCTGTCCACGTATGCCGAC..........................2330.6720200000000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTGT........................................2030.6720110000000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTGTCC......................................2230.6720110000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATGCT.............................................2530.6720200000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGT........................................1930.6720200000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCC......................................2030.6720200000000
...................................................................................................................................CC----A-----GAACG--GGAATC---AATGCTGCTG.........................................2430.6720200000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATGCTA............................................2630.6720200000000
........................................................AATCTATGCCTCAGACATGC......................................................................................................................................2020.5010100000000
.......................................................................................................................................................................TGTCCACGTATGCCGATGACACGGTGAT...............2820.5010100000000
.............................................................................................CCTGACAG-C------------ACTG--GCTTCCA--TCC----.........................................................................2320.5010100000000
.............................CAGTGTTCTTGGACCAATATT................................................................................................................................................................2120.5010000000010
...................TCCCACAGGGCAGTGTTCTT...........................................................................................................................................................................2020.5010100000000
..............................................TATTATACACAATCTATGCCTCAGACA.........................................................................................................................................2720.5010010000000
.......................................................................................................................................................................TGTCCACGTATGCCGATGA........................1920.5010100000000
............................................................................CAATGCCTTACCTCATCCC...................................................................................................................1920.5010001000000
........................................................................................TCATCCCTGACAG-C------------ACTG--GCTTCC...................................................................................2420.5010100000000
...............................................................................TGCCTTACCTCATCCCTGACAG-C------------ACTG--.........................................................................................2720.5010100000000
.......................................................................................................................................................................................TGACACGGTGATAAT-GA-----GCGC2120.5010100000000
...............................................................................................TGACAG-C------------ACTG--GCTTCCA--TCC----.........................................................................2120.5010100000000
.................................................................................................................................................................TGCTGCTGTCCACGTATGCC.............................2020.5010100000000
..............................................................................ATGCCTTACCTCATCCCTGACA..............................................................................................................2220.5010000000100
.....................................................................................ACCTCATCCCTGACAG-C------------A..............................................................................................1820.5010100000000
.................................................................................................................................................................TGCTGCTGTCCACGTATGCCGA...........................2220.5010100000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCACGTAT................................2720.5010100000000
.....................................................................................ACCTCATCCCTGACAG-C------------ACTG--GCTTC....................................................................................2620.5010100000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCCACGT..................................2420.5010100000000
..........................................................................................ATCCCTGACAG-C------------ACTG--GCTTCC...................................................................................2220.5010100000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCCACA...................................2320.5010100000000
....................................................................................TACCTCATCCCTGACAG-C------------AC.............................................................................................2020.5010100000000
........................................................................................................................................................................GTCCACGTATGCCGATGACACGGTT.................2520.5010100000000
...................................................................................TTACCTCATCCCTGACAG-C------------ACTG--G........................................................................................2420.5010100000000
........................................................................................TCATCCCTGACAG-C------------ACTG--G........................................................................................1920.5010100000000
........ATCAGCTGGAGTCCCACAGGGCAG..................................................................................................................................................................................2420.5010100000000
......................................................................................................................................................GGAATC---AATGCTGCTGTCCAC....................................2120.5010100000000
...................TCCCACAGGGCAGTGTTCTTGGACCAATA..................................................................................................................................................................2920.5010000001000
................................................TTATACACAATCTATGCCTCAGACATG.......................................................................................................................................2720.5010100000000
.......................................................................................................................................................GAATC---AATGCTGCTGTCCACG...................................2120.5010100000000
.........................................................ATCTATGCCTCAGACATGC......................................................................................................................................1920.5010100000000
.......TATCAGCTGGAGTCCCACAGGGCAG..................................................................................................................................................................................2520.5010100000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCCACGTAT................................2620.5010100000000
....................................................................................TACCTCATCCCTGACAG-C------------ACTG--GCTTC....................................................................................2720.5010100000000
............................................................TATGCCTCAGACATGCCAATGCCT..............................................................................................................................2420.5010100000000
.........................................................................TGCCAATGCCTTACCTCATCCCTGACA..............................................................................................................2720.5010100000000
.............................................................................................CCTGACAG-C------------ACTG--GCTTCCA--TC..............................................................................2220.5010100000000
..........................................................................................................................................................TC---AATGCTGCTGTCCACGTATGC..............................2320.5010100000000
..............................................................................................CTGACAG-C------------ACTG--GCTTCCA--................................................................................1920.5010100000000
....................CCCACAGGGCAGTGTTCTTGGACCAA....................................................................................................................................................................2620.5010100000000
....................................................................................TACCTCATCCCTGACAG-C------------ACTG--GCTT.....................................................................................2620.5010100000000
........................................................................................TCATCCCTGACAG-C------------ACTG--GCTTCCA--TCC----.........................................................................2820.5010100000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCACGTG.................................2620.5010010000000
.....................................................CACAATCTATGCCTCAGACATGC......................................................................................................................................2320.5010100000000
.........................................................................TGCCAATGCCTTACCTCATCCCTGA................................................................................................................2520.5010100000000
.....................CCACAGGGCAGTGTTCTTG..........................................................................................................................................................................1920.5010100000000
....................................................ACACAATCTATGCCTCAGACA.........................................................................................................................................2120.5010100000000
......................................................ACAATCTATGCCTCAGACATG.......................................................................................................................................2120.5010100000000
.............................................ATATTATACACAATCTATGCCTCAGACA.........................................................................................................................................2820.5010100000000
...............................................................................TGCCTTACCTCATCCCTGACAG-C------------A..............................................................................................2420.5010100000000
.................................................................................................................................................................................TGCCGATGACACGGTGATAAT-GA-----GCGT2720.5010100000000
......................CACAGGGCAGTGTTCTTGGACC......................................................................................................................................................................2220.5010100000000
...................................TCTTGGACCAATATTATACACAATC......................................................................................................................................................2520.5010000000010
......ATATCAGCTGGAGTCCCACAGGGCA...................................................................................................................................................................................2520.5010100000000
......................CACAGGGCAGTGTTCTTGGACCAATAAA................................................................................................................................................................2820.5010000000010
...................................................................................TTACCTCATCCCTGACAG-C------------AC.............................................................................................2120.5010100000000
.......................................................................................................................................................................................TGACACGGTGATAAT-GA-----GT..1920.5010100000000
.................................................................................................................................................................................TGCCGATGACACGGTGATAAT-GA-----G...2420.5010100000000
...........................................................................................TCCCTGACAG-C------------ACTG--GCTTC....................................................................................2020.5010100000000
.....................................................................................ACCTCATCCCTGACAG-C------------AC.............................................................................................1920.5010100000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCCACGA..................................2420.5010100000000
...................TCCCACAGGGCAGTGTTCTTGGAAA......................................................................................................................................................................2520.5010100000000
........................................................................................TCATCCCTGACAG-C------------ACTG--GCTT.....................................................................................2220.5010000000100
....................................................................AGACATGCCAATGCCTTACCT.........................................................................................................................2120.5010100000000
........................................................................................TCATCCCTGACAG-C------------ACTG--GCTTCCA--TCC----A-----...................................................................2920.5010100000000
.................................................................................................................................................................................TGCCGATGACACGGTGATAAA-...........2120.5010100000000
.........................AGGGCAGTGTTCTTGGACCAATAT.................................................................................................................................................................2420.5010100000000
...................................................................................TTACCTCATCCCTGACAG-C------------ACTG--GCTT.....................................................................................2720.5010100000000
.........................................................................................................................................................................TCCACGTATGCCGATGACACGG...................2220.5010100000000
...............................................................................TGCCTTACCTCATCCCTGACAG-C------------ACTG--GC.......................................................................................2920.5010100000000
.........................................................ATCTATGCCTCAGACATGCC.....................................................................................................................................2020.5010100000000
....................................................ACACAATCTATGCCTCAGACAT........................................................................................................................................2220.5010100000000
...........................................................CTATGCCTCAGACATGCC.....................................................................................................................................1820.5010100000000
...............................................................................TGCCTTACCTCATCCCTGACAG-C------------ACAA--.........................................................................................2720.5010100000000
........................................................................................................................................................................GTCCACGTATGCCGATGACAC.....................2120.5010100000000
..........................................................................................................................................................TC---AATGCTGCTGTCCACGTATGCCG............................2520.5010100000000
.................................................TATACACAATCTATGCCTCAGACA.........................................................................................................................................2420.5010100000000
......................................................................................................................................................................CTGTCCACGTATGCCGATGACACG....................2420.5010100000000
.................................................................................CCTTACCTCATCCCTGACAG-C------------ACT............................................................................................2420.5010100000000
....................................................................................................................................C----A-----GAACG--GGAATC---AATGCTGCTGT........................................2430.3310100000000
......................................................................................................................................................GGAATC---AATGCTGCTGTCCA.....................................2030.3310100000000
......................................................................................................................G--GCTTCCA--TCC----A-----GAACG--GGAA........................................................2130.3310100000000
................................................................................................................................................AACG--GGAATC---AATGCTGCTGTT.......................................2230.3310010000000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTGTCA......................................2230.3310100000000
.....................................................................................................................TG--GCTTCCA--TCC----A-----GAACG--GGAATC---A..................................................2530.3310100000000
..............................................................................................................................CA--TCC----A-----GAACG--GGAATC---AATGCTG............................................2430.3310100000000
.........................................................................................................................................A-----GAACG--GGAATC---AATGCTG............................................1930.3310100000000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGA........................................1930.3310100000000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTA.........................................2530.3310100000000
...................................................................................................................................................G--GGAATC---AATGCTGCTGTCCA.....................................2130.3310100000000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATG...............................................2230.3310100000000
.....................................................................................................................TG--GCTTCCA--TCC----A-----GAACG--GGAATC---AAT................................................2730.3310100000000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGC..............................................2030.3310100000000
...................................................................................................................................CC----A-----GAACG--GGAATC---AATGCTGC...........................................2230.3310100000000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATGC..............................................2330.3310100000000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATGCT.............................................2430.3310100000000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATGCTGC...........................................2630.3310100000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---A..................................................2030.3310100000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AA.................................................2130.3310100000000
...................................................................................................................................CC----A-----GAACG--GGAATC---AATGCTG............................................2130.3310100000000
....................................................................................................................CTG--GCTTCCA--TCC----A-----GAACG--GGAAT.......................................................2430.3310100000000
.........................................................................................................................................A-----GAACG--GGAATC---AATGCTGCTG.........................................2230.3310100000000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTGT........................................2630.3310100000000
...................................................................................................................................CC----A-----GAACG--GGAATC---AATGCTGCTGT........................................2530.3310100000000
..............................................................................................................................CA--TCC----A-----GAACG--GGAATC---AATGCT.............................................2330.3310100000000
.....................................................................................................................TG--GCTTCCA--TCC----A-----GAACG--G...........................................................1930.3310100000000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTG.........................................1930.3310010000000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTGTCCA.....................................2930.3310100000000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATGCTGCA..........................................2830.3310000000010
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCAAA...........................................2340.2510100000000
droPer2
GGGAAAATATCAGCTGGAGTCCCACAGGGCAGTGTTCTTGGACCAATATTATACACAATCTATGCCTCAGACATGCCAATGCCTCACCTCATCCCGGACAG-C------------ACTG--GCTTCCA--TCC----A-----GAACG--GGAATC---AATGCTGCTGTCCACGTATGCCGACGACACGGTGATAAT-GA-----GCGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATGC..............................................23130.85110110000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATGCTG............................................25120.678080000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTG.........................................25120.334040000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATGCTG............................................26120.334040000
.........................................................................................................................................................................TCCACGTATGCCGACGACACGGTGA................25160.315050000
.......................................................................................................................................................................TGTCCACGTATGCCGACGACACGG...................24160.315050000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATGCT.............................................24130.314040000
...............................................................................................................................A--TCC----A-----GAACG--GGAATC---AATGCTG............................................23120.253030000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATGCTGC...........................................26120.253030000
.......................................................................................................................................................GAATC---AATGCTGCTGTCCACGTA.................................23130.233030000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATG...............................................22130.233030000
....................................................................................................................................................................TGCTGTCCACGTATGCCGACG.........................21150.203030000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATGCTGC...........................................27120.172020000
.............................................................................................................................CCA--TCC----A-----GAACG--GGAATC---AATGCTGCT..........................................27120.172020000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTGTCC......................................22130.152011000
...................TCCCACAGGGCAGTGTTCTTGGACC......................................................................................................................................................................2570.141010000
.......................................................................................................................................................................TGTCCACGTATGCCGACGACA......................21160.132020000
.........................................................................................................................................................................TCCACGTATGCCGACGACACG....................21160.132020000
.GGAAAATATCAGCTGGAGTCC............................................................................................................................................................................................2180.131010000
.........................................................................................................................................................................TCCACGTATGCCGACGACACGGT..................23160.132020000
.......................................................................................................................................................................TGTCCACGTATGCCGACGA........................19160.132020000
...............................................................................................................................................................................TATGCCGACGACACGGTGATAAT-GA-----G...26160.132020000
...................................................................................TCACCTCATCCCGGACAG-C------------ACTG--.........................................................................................2390.111010000
...........................................................................................TCCCGGACAG-C------------ACTG--GCTT.....................................................................................1990.111010000
..............................................................................................................................CA--TCC----A-----GAACG--GGAATC---AATGCTGC...........................................25120.081010000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTGTT.......................................27120.081010000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTGTC.......................................27120.081010000
...............................................................................................................................A--TCC----A-----GAACG--GGAATC---AATGCTGC...........................................24120.081010000
..............................................................................................................................CA--TCC----A-----GAACG--GGAATC---AATGCTGCA..........................................26120.081010000
..................................................................................................................................TCC----A-----GAACG--GGAATC---AATGCTGCTGT........................................26120.081010000
..............................................................................................................................CA--TCC----A-----GAACG--GGAATC---AATG...............................................21130.081010000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTGTCA......................................22130.081010000
..........................................................................................................................................................TC---AATGCTGCTGTCCACGTATGCCA............................25130.081010000
...........................................................................................................................TTCCA--TCC----A-----GAACG--GGAATC---AATGC..............................................25130.081010000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTGTC.......................................21130.081010000
...................................................................................................................................CC----A-----GAACG--GGAATC---AATGCTGCTGT........................................25130.081010000
.......................................................................................................................................................GAATC---AATGCTGCTGTCCACGTATG...............................25130.081010000
.................................................................................................................................................ACG--GGAATC---AATGCTGCTGTCCA.....................................23130.081010000
.........................................................................................................................................A-----GAACG--GGAATC---AATGCTGCTGT........................................23130.081010000
......................................................................................................C------------ACTG--GCTTCCA--TCC----A-----GAACG--GGAAT.......................................................26130.081010000
..................................................................................................................................................CG--GGAATC---AATGCTGCTGTCCAC....................................23130.081010000
............................................................................................................................TCCA--TCC----A-----GAACG--GGAATC---AATG...............................................23130.081010000
.................................................................................................ACAG-C------------ACTG--GCTTCCA--TCC----A-----GAACG--G...........................................................26150.071010000
....................................................................................................................................................................TGCTGTCCACGTATGCCGACGACAC.....................25150.071010000
...........................................................................................................................................................C---AATGCTGCTGTCCACGTAAAA..............................22150.071010000
......................................................................................................................................................................CTGTCCACGTATGCCGACGACACG....................24160.061010000
...............................................................................................................................................................................TATGCCGACGACACGGTGATAAT-GA-----GC..27160.061010000
........................................................................................................................................................................GTCCACGTATGCCGACGACAC.....................21160.061010000
.......................................................................................................................................................................TGTCCACGTATGCCGACGACAC.....................22160.061010000
......................................................................................................................................................................CTGTCCACGTATGCCGACGACACGT...................25160.061010000
.......................................................................................................................................................................TGTCCACGTATGCCGACGAA.......................20160.061010000
.......................................................................................................................................................................TGTCCACGTATGCCGACGAC.......................20160.061010000
.................................................................................................................................................................................TGCCGACGACACGGTGATAAT-GA-----G...24160.061000010
.........................................................................................................................................................................TCCACGTATGCCGACGACACGGTGATAA.............28160.061010000
..........................................................................................................................................................................................CACGGTGATAAT-GA-----GAAA18200.051010000
droAna3
GGAATTATCAAGGCAGGAGTGCCTCAAGGAAGCATCCTGGGCCCAATCCTCTACCTCATATTCACCTCTGACATGCCTCTCCCTGACATTGTTCCCAGCAT-TGCTAGG------------AGCAATACCCAC----A-----G-C--CCGGGAAA---TTTTCTCCTCTCCACCTATGCGGATGACACGGCCATCCT-GT-----ACAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
------ATCTCTGCTGGTGTTCCCCAAGGCAGCGTCCTCGGCCCTACTCTATATTCTATCTACGCTTCAGATATGCCTACAAAAA---CTTTAATCAC-------------------------------TGAA----G-----T-GAA--GCAAGA---CGTGCTAATTGCCACCTACGCTGATGGCACTGCTGTCCT-GA---------SizeHit CountTotal NormTotal
No Reads
droKik1
GGGAAGATAAAAGCAGGTGTCCCCCAGGGCAGTGTACTGGGCCCCATATTATATAAC----ACACGTCTGACATACCACTGCCTCACCTCAAAGGCCA--AA-ACTATGAATACA----TCTC------CAAC----C-----C-C--TTCACGGA---CATAATACTATCTACATATGCCGACGATACAATAATAAT-GT-----GCGCSizeHit CountTotal NormTotal
No Reads
droFic1
GGAAAAATCACCGCTGGGGTCCCGCAAGGCAGTGTCCTTGGGCCCATTTTATATACCATCTACACTTCGGATATTCCACTCCCCAGAATAATCGGCCC--AG-AATACTCCTACA----ACAG------TGAG----C-----C-T--TTTGAGAA---TATGCTCTTGTCCACATATGCTGATGATACTATTATCAT-GT-----GCGCSizeHit CountTotal NormTotal
No Reads
droEle1
GGTAATATTGCCGCGGGTGTCCCTCAAGGCAGTGTTCCAGGGCCCATTCTTTACACGATCTTCACTGCTGACATGCCGCTTCTTTCTTCTGTCGGCCG--G--------------------ACCTTTT--TAC----T-----GAGC-TCGCTATC---TATGTTACTCTCAACCTATGCATACGACACTGTTATTAT-GC-----GTACSizeHit CountTotal NormTotal
No Reads
droRho1
CGTCCTATCTCTGCTGGCGTACCTCAAGGCAGTGTACTGGGCCCGACTCTCTACTCACTGTACACTTCAGATATGCCTGATTCCTGGGAATGTTCAAA-----A----------------G--------T--T----G-----A-CGA--GGATAA---CATGCTCATAGCTACGTATGCCGACGACACTGCTGTAAT-GG-----TCAGSizeHit CountTotal NormTotal
No Reads
droBia1
GCC---ATTGCAGCTGGCGTCCCCCAAGGAAGCGTCTTAGGACCGCTACTGTACTCCATCTTTACAGCAGACATCCCCAAGCCAAGCTATGAAGA-AA---------------------TGACC-----TACG----A-----C-A--A-CAGCAA---AATGCTGCTGGCCAGCTTCGCTGACGACGTCTGCTTTCT-CA-----GCTCSizeHit CountTotal NormTotal
No Reads
droTak1
GGTAAAATGACTGCGGGCGTTCCTCAAGGCAGTGTTCTAGGGCCTATTCTCTACACGATTTACACTGCCGACATGCCGCTTCCTACTTCTGTCGGACG--GAC------------ACTT--TT-------TACTGAGCAAGCTGACCA--TAAATC---CATGCTACTTTCAACTTATGCAGACGACGCTGTCATTAT-GT-----GTACSizeHit CountTotal NormTotal
No Reads
droEug1
GCACACATTCATGCAGGAGTGCCCCAAGGAAGTGTACTTGGTCCGATTTTGTACACTATATATACCAGTGACATGCCAGTTCCTCTGCCGACTACAG-------------------------------------------------------ATGCCCGTCTGCTTATGGCTACTTATGCCGACGACACGGCCATCCTTGC-----GTCCSizeHit CountTotal NormTotal
No Reads
dm3
GGACAAATAGGCGCAGGGGTGCCCCAAGGAAGCAACCTTGGACCCATACTGTACTCTATCTTCTCCTCAGACATGCCACTCCCACACATATACCACCC-------------------------------CTCC----C-----C-A--ACAGAAAG---AATTATGCTCTCAACATACGCAGACGACACTATAGTACT-CA-----GCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
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fGS/OSS		V092
Male-body		V093
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S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.................................AACCTTGGACCCATACTGTACTCTAT.......................................................................................................................................................2631.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000101020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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GGACAAATAGGCGCAGGGGTGC............................................................................................................................................................................................2231.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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........................................................TATCTTCTCCTCAGACATGCCAC...................................................................................................................................2331.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................TCTTCTCCTCAGACATGCCACTCCCA..............................................................................................................................2631.6750000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TCC----C-----C-A--ACAGAAAG---AATTATG............................................2131.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300100000000000000000000000000000000000000000000000000000
..........................................................TCTTCTCCTCAGACATGCCACTCC................................................................................................................................2431.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................CCTTGGACCCATACTGTACTCTATC......................................................................................................................................................2531.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TACTCTATCTTCTCCTCAGAC..........................................................................................................................................21201.60320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050800000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000110000000000000000021221011032100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TATGCTCTCAACATACGCAGA...........................2151.6080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000310101000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTATGCTCTCAACATACGCAGA...........................2251.6080000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AACATACGCAGACGACACTAT..................2151.6080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000200020000000000000000000000000000100000000000000000000100
............................................CATACTGTACTCTATCTTCTCCTCAGA...........................................................................................................................................27201.60320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000060408580000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................C-----C-A--ACAGAAAG---AATTATGCTCTCAACA...................................2741.5060000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000100000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AACATACGCAGACGACACTATAGT...............2451.4070000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................TCAGACATGCCACTCCCACACATATACC....................................................................................................................2831.3340000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................C-------------------------------CTCC----C-----C-A--ACAGAAAG---AATTA..............................................2131.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
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.............................................................TCTCCTCAGACATGCCACTCCC...............................................................................................................................2231.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CGCAGGGGTGCCCCAAGGAAGC.................................................................................................................................................................................2231.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................TATCTTCTCCTCAGACATGCCACTCCC...............................................................................................................................2731.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................ATCTTCTCCTCAGACATGCCA....................................................................................................................................2131.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100010000000000000000100000000000000000000000000000000000
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.....................CCCCAAGGAAGCAACCTTGGACCCA....................................................................................................................................................................2531.3340000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................AACCTTGGACCCATACTGTACTCT.........................................................................................................................................................2431.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AACCTTGGACCCATACTGTAC............................................................................................................................................................2131.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTCTCCTCAGACATGCCACTCCCACACA..........................................................................................................................2831.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCCCCAAGGAAGCAACCTTGGACCCA....................................................................................................................................................................2631.3340000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAGGAAGCAACCTTGGACCCATACT................................................................................................................................................................2531.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................GACATGCCACTCCCACACATATACC....................................................................................................................2531.3340000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ACTCTATCTTCTCCTCAGACATGCCACT..................................................................................................................................2831.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................AGCAACCTTGGACCCATACTGTACT...........................................................................................................................................................2531.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ACATACGCAGACGACACTATA.................2151.2060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100030000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTATGCTCTCAACATACGCAGAC..........................2351.2060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................G---AATTATGCTCTCAACATAC................................2051.2060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TACTGTACTCTATCTTCTCCTCAGACAT........................................................................................................................................28201.20240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000000000080003540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................ATGCTCTCAACATACGCAGA...........................2061.1770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TCTATCTTCTCCTCAGACATG.......................................................................................................................................21201.10220000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000040200000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010010011020210001000000000020000010001000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTGGACCCATACTGTACTCTATCTT....................................................................................................................................................25201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208700000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CCATACTGTACTCTATCTTCT..................................................................................................................................................21201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000010522700000000000001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......ATAGGCGCAGGGGTGCCCCAAG......................................................................................................................................................................................2231.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCAACCTTGGACCCATACTGTACT...........................................................................................................................................................2431.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCAACCTTGGACCCATACT................................................................................................................................................................1931.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GGACAAATAGGCGCAGGGGTG.............................................................................................................................................................................................2131.0030000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAATAGGCGCAGGGGTGCCCCAAG......................................................................................................................................................................................2431.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.......................................................................................................................................................GAAAG---AATTATGCTCTCAACATACGC..............................2641.0040000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TCTCAACATACGCAGACGACACTAT..................2551.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TCTCAACATACGCAGACGACACTATAGT...............2851.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAAGGAAGCAACCTTGGACCCATACTG...............................................................................................................................................................2731.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................C-----C-A--ACAGAAAG---AATTATGCTC.........................................2141.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000010000000000000000
.......TAGGCGCAGGGGTGCCCCAAG......................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000010000000000000000000000000
..........................................................................................................................................................AG---AATTATGCTCTCAACATACGCAGA...........................2651.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010001010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................CCTTGGACCCATACTGTACTC..........................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................G---AATTATGCTCTCAACATACG...............................2151.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000
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.......................................................CTATCTTCTCCTCAGACATGCCACT..................................................................................................................................2531.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CAGACGACACTATAGTACT-C..........2031.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CAGACATGCCACTCCCACACATATAC.....................................................................................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TCCTCAGACATGCCACTCCCA..............................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TATACCACCC-------------------------------CTCC----C-----C-A--ACAG..........................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TATACCACCC-------------------------------CTCC----C-----C-A--ACAGAAAG---A..................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AATAGGCGCAGGGGTGCCCCAAG......................................................................................................................................................................................2331.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TCCCACACATATACCACCC-------------------------------CTCC----C-----...................................................................2431.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGCCCCAAGGAAGCAACCTTG..........................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000
............................................................................CACTCCCACACATATACCACC.................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000
..............AGGGGTGCCCCAAGGAAGCA................................................................................................................................................................................2031.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AAG---AATTATGCTCTCAACATACGCA.............................2551.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000300010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TCTCCTCAGACATGCCACTCCCACA............................................................................................................................2531.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GACATGCCACTCCCACACATATAC.....................................................................................................................2431.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TCAACATACGCAGACGACAC.....................2051.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AATTATGCTCTCAACATACGCAGACGA........................2751.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTCTCCTCAGACATGCCACTCCCACA............................................................................................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CAAATAGGCGCAGGGGTGCCCCAA.......................................................................................................................................................................................2431.0030000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TACGCAGACGACACTATAGTACT-CA-----GCT.2831.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TACGCAGACGACACTATAGTAC.............2231.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CATACGCAGACGACACTATA.................2051.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000000000000000000000000000000000000000
...............................................................TCCTCAGACATGCCACTCCCACAT...........................................................................................................................2431.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TGCCACTCCCACACATATACCACCC-------------------------------CTC..............................................................................2831.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................C----C-----C-A--ACAGAAAG---AATTATGCTCTCAA.....................................2631.0030000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................C----C-----C-A--ACAGAAAG---AATTATGCT..........................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000100000000000000000
...............................................................................TCCCACACATATACCACCC-------------------------------CTCC----C-----C-A--A.............................................................2731.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTATGCTCTCAACATACGCAG............................2151.0050000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAACCTTGGACCCATACTGT..............................................................................................................................................................2031.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGGAAGCAACCTTGGACCCAT...................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............CAGGGGTGCCCCAAGGAAGCAA...............................................................................................................................................................................2231.0030000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...................................CCTTGGACCCATACTGTACTCTATCT.....................................................................................................................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TCCCACACATATACCACCC-------------------------------CTCC----C-----C-.................................................................2531.0030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................ACGCAGACGACACTATAGTACT-CA-----GC..2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CAGAAAG---AATTATGCTCTCAACAT..................................2441.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TCTCAACATACGCAGACGACACTA...................2451.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CTCAGACATGCCACTCCCACA............................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droSim2
GGACAAATAGGCGCAGGAGTGCCTCAAGGAAGCAATCTCGGACCACTACTTTACTCTATCTTCTCCTCTGACATGCCCCTCCCATATATCTACCGCCC-------------------------------TTCA----C-----C-A--ACACAAAG---AATTATGCTCTCAACATACGCAGACGACACTATAGTCCT-CA-----GCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................GCTCTCAACATACGCAGACGACAC.....................2418.00800004400000000000
.....................................................................................................................................................................GCTCTCAACATACGCAGACG.........................2014.00400000400000000000
.....................................................................................................................................................................GCTCTCAACATACGCAGACGACACTA...................2612.00200002000000000000
......................................CGGACCACTACTTTACTCTATCTTC...................................................................................................................................................2511.00100000001000000000
...............................................................................................................................................................AATTATGCTCTCAACATACGCAGACGA........................2711.00100000000010000000
...........................................CACTACTTTACTCTATCTTC...................................................................................................................................................2021.00200000100000010000
GGACAAATAGGCGCAGG.................................................................................................................................................................................................1740.75300000000003000000
..................GTGCCTCAAGGAAGCAATCT............................................................................................................................................................................2040.75300000300000000000
...............................................................................................................................................................................TACGCAGACGACACTATAG................1920.50100000000001000000
..ACAAATAGGCGCAGG.................................................................................................................................................................................................1540.50200000000002000000
...............................................................................................................................................................................TACGCAGACGACACTATA.................1820.50100000000001000000
...........................................CACTACTTTACTCTATCTTCT..................................................................................................................................................2120.50100000000000010000
..........................................................................................................................................................AG---AATTATGCTCTCAAC....................................1720.50100000000001000000
......................CTCAAGGAAGCAATCT............................................................................................................................................................................1640.50200000002000000000
...........................................CACTACTTTACTCTATCTTCTC.................................................................................................................................................2220.50100001000000000000
...................TGCCTCAAGGAAGCAATCT............................................................................................................................................................................1940.50200000000002000000
...........................................CACTACTTTACTCTATC......................................................................................................................................................1720.50100000000100000000
...............................................................................................................................................................................TACGCAGACGACACT....................1550.40200000010001000000
.......................TCAAGGAAGCAATCT............................................................................................................................................................................1540.25100000000001000000
...................TGCCTCAAGGAAGCAATC.............................................................................................................................................................................1840.25100000000001000000
...............................................................................................................................................................................TACGCAGACGACACTA...................1650.20100000000001000000
droSec2
GGACAAATAGGCGCAGGTGTGCCTCAAGGAAGCAATCTTGGACCACTACTTTACTCTATCTTCTCTTCAGACATGCCTCTTCCACATAGCTACCGCCC-------------------------------CTCA----C-----C-A--ACAGAAAG---AATTATGCTTTCAACATACGCAGACGACACTATGATCCT-TA-----GCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................CTTTACTCTATCTTCTCTTCAGACA.........................................................................................................................................2551.2066000
............................................ACTACTTTACTCTATCTTCTCTTC..............................................................................................................................................2451.0055000
................................................CTTTACTCTATCTTCTCTTCAGAC..........................................................................................................................................2451.0055000
............................................ACTACTTTACTCTATCTTCTCTTCAGA...........................................................................................................................................2750.6033000
.........................................................................TGCCTCTTCCACATAGCTACCGCCC-------------------------------.................................................................................2550.6033000
............................................ACTACTTTACTCTATCTTCTCTTCAGACA.........................................................................................................................................2950.6033000
...............................................ACTTTACTCTATCTTCTCTTCAGA...........................................................................................................................................2450.6033000
...........................................CACTACTTTACTCTATCTTCTCTTC..............................................................................................................................................2550.4022000
.......................................................................CATGCCTCTTCCACATAGCTACCGCCC-------------------------------.................................................................................2750.4022000
.........................................................................TGCCTCTTCCACATAGCTACCGCCC-------------------------------C................................................................................2650.4022000
.....................................................................GACATGCCTCTTCCACATAGCTAC.....................................................................................................................2450.4022000
.................................................TTTACTCTATCTTCTCTTCAGACA.........................................................................................................................................2450.4022000
............................................ACTACTTTACTCTATCTTCTCTTCAG............................................................................................................................................2650.4022000
.........................................................................TGCCTCTTCCACATAGCTACCGCC.................................................................................................................2450.2011000
........................................GACCACTACTTTACTCTATCTTCTC.................................................................................................................................................2550.2011000
......................................TGGACCACTACTTTACTCTATCTTCT..................................................................................................................................................2650.2011000
...........................................................................................................................................................G---AATTATGCTTTCAACATACGCAGA...........................2550.2011000
....................................................................................................................................................................TGCTTTCAACATACGCAGACGACACTA...................2750.2011000
............................................ACTACTTTACTCTATCTTCTCTTCA.............................................................................................................................................2550.2011000
.......................................................CTATCTTCTCTTCAGACATGCCT....................................................................................................................................2350.2011000
................................................CTTTACTCTATCTTCTCTTCAG............................................................................................................................................2250.2011000
.............................................CTACTTTACTCTATCTTCTCTTC..............................................................................................................................................2350.2011000
....................................................................................................................................................................TGCTTTCAACATACGCAGACGA........................2250.2011000
...............................................................................................................................................................AATTATGCTTTCAACATACGCAGACGA........................2750.2011000
.......................................................................................................................................................................TTTCAACATACGCAGACGA........................1950.2011000
................................................CTTTACTCTATCTTCTCTTCAGA...........................................................................................................................................2350.2011000
..........................................................................................................................................................................CAACATACGCAGACGACACTATGATCC.............2760.1711000
..................................................................TCAGACATGCCTCTTCCACAT...........................................................................................................................2160.1711000
..........................................................................................................................................................................CAACATACGCAGACGACACTA...................2170.1410010
...................TGCCTCAAGGAAGCAATCTTGGACCACT...................................................................................................................................................................2890.1111000
...................TGCCTCAAGGAAGCAATCTTGGAC.......................................................................................................................................................................2490.1111000
.............................................................................................CGCCC-------------------------------CTCA----C-----C-A--ACAGAAAG---AATTA..............................................25190.0511000
droYak3
GGACAAATAGGTGCTGGTGTGCCTCAGGGAAGCAACCTGGGCCCCATACTGTACTCAATCTTCTCTTCAGACATGCCTATCCCTAGAACATACAGCGT-------------------------------CTCA----C-----C-A--ACAGGAGA---AATGCTGCTGTCAACGTATGCAGATGACACAGTAGTCCT-CA-----GCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................GCAGATGACACAGTAGTCCT-CA-----GC..2480.63505000000000
.................................................................................................................................................................TGCTGCTGTCAACGTATGCAGATGACA......................2790.44404000000000
..................................................................................................................................................................................GCAGATGACACAGTAGTCCT-CA-----GCA.2580.38303000000000
.......................TCAGGGAAGCAACCTGGGCCCCATA..................................................................................................................................................................25120.25303000000000
...................................................................................................................................................................................CAGATGACACAGTAGTCCT-CA-----GC..2380.25202000000000
.......................TCAGGGAAGCAACCTGGGCCCC.....................................................................................................................................................................22120.17200200000000
................................................................................................................................................................................ATGCAGATGACACAGTAGTCCT-C..........2380.13101000000000
..................................................................................................................................................................................GCAGATGACACAGTAGTCCT-CA-----GCTA2680.13101000000000
...............................................................................................................................................................................TATGCAGATGACACAGTAGTCCT-C..........2480.13100100000000
............................................................................................................................................................................ACGTATGCAGATGACACAGTAGTCC.............2580.13100100000000
.................................................................................................................................................................................TGCAGATGACACAGTAGTCCT-CA-----GC..2580.13101000000000
.............................................................................................................................................................................CGTATGCAGATGACACAGTAGTCCT-...........2580.13101000000000
...........................................................................................................................................................................AACGTATGCAGATGACACAGTAGTCCT-C..........2880.13100100000000
.........................................................................................................................................................................TCAACGTATGCAGATGACACAGTAGTCC.............2880.13101000000000
....................................................................................................................................................................................AGATGACACAGTAGTCCT-CA-----GCAC2480.13101000000000
........................................................................................................................................................................................GACACAGTAGTCCT-CA-----GCAC2080.13101000000000
.................................................................................................................................................................................TGCAGATGACACAGTAGTCCT-CA-----G...2480.13101000000000
...................................................................................................................................................................................CAGATGACACAGTAGTCCT-CA-----G...2280.13101000000000
......................................................................................................................................................AGGAGA---AATGCTGCTGTCAACG...................................22100.10101000000000
.......................................................................................................................................................GGAGA---AATGCTGCTGTCAACGTATGCA.............................27100.10101000000000
....................................................................................................................................A----C-----C-A--ACAGGAGA---AATGCTGC...........................................20100.10100100000000
.......................TCAGGGAAGCAACCTGGGCCCCATAC.................................................................................................................................................................26120.08101000000000
...............................GCAACCTGGGCCCCATACTGTACT...........................................................................................................................................................24120.08101000000000
........................CAGGGAAGCAACCTGGGCCCCATA..................................................................................................................................................................24120.08101000000000
..........................GGGAAGCAACCTGGGCCCC.....................................................................................................................................................................19120.08101000000000
..................................ACCTGGGCCCCATACTGTACTC..........................................................................................................................................................22120.08101000000000
droEre2
GGCCAAATAGGCGCTGGCGTGCCTCAAGGAGGTAACCTGGGCCCCCTATTGTACTCAATATTCTCCTCAGACATGCCTATTCCAAAGATACACAGCCC-------------------------------CTCA----C-----A-A--ACAGGAGA---AATGCTGCTCTCAACCTACGCAGACGACACGATAGTCCT-TA-----GCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................GCAGACGACACGATAGTCCT-TA-----GC..2411.0011000000
...................................................................................................................................CA----C-----A-A--ACAGGAGA---AATGCTGCTCTCA......................................2611.0011000000
.................................................................................................................................................................TGCTGCTCTCAACCTACGCAGACGACAC.....................2811.0011000000
.........................................................................................................................................................................TCAACCTACGCAGACGACACGATAGTCC.............2811.0011000000
.......TAGGCGCTGGCGTGCCTCAAGGAGG..................................................................................................................................................................................2511.0011000000
...............................................................TCCTCAGACATGCCTATTCCAAAG...........................................................................................................................2411.0011000000
..........................................................................................CACAGCCC-------------------------------CTCA----C-----A-A--ACAGGAGA---AATGCT.............................................2911.0011000000
...................................................TACTCAATATTCTCCTCAGACATGCC.....................................................................................................................................2611.0011000000
...............................................................................TTCCAAAGATACACAGCCC-------------------------------C................................................................................2011.0011000000
..................................................GTACTCAATATTCTCCTCAGACATGC......................................................................................................................................2611.0011000000
.......TAGGCGCTGGCGTGCCTCAAGGAGGTAACC.............................................................................................................................................................................3011.0010000100

Generated: 05/15/2015 at 03:00 PM