ID:

dmo_2614

 Coordinate:

scaffold_6838:2746-2896 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.7 -18.5 -18.5 -17.9

Flybase annnotation

exon [dmoj_GLEANR_7123:1]; CDS [Dmoj\GI21910-cds]; intron [Dmoj\GI21910-in]

Repeatable elements

NameClassFamilyStrand
BEL-11_DTa-I-intLTRPao+
mature
  1. scaffold_1700:2209-2229 -
  2. scaffold_3774:2952-2972 +
  3. scaffold_4182:161-181 +
  4. scaffold_5889:2831-2851 +
  5. scaffold_6406:82808-82828 -
  6. scaffold_6417:42779-42799 +
  7. scaffold_6425:65038-65058 -
  8. scaffold_6500:32230392-32230412 -
  9. dmo_2614  scaffold_6838:2818-2838 +
star
  1. dmo_347  scaffold_1700:2244-2271 -
  2. scaffold_3774:2910-2937 +
  3. scaffold_4182:119-146 +
  4. scaffold_5889:2789-2816 +
  5. scaffold_6377:62850-62877 +
  6. scaffold_6406:82843-82870 -
  7. scaffold_6417:42737-42764 +
  8. scaffold_6425:58750-58777 -
  9. scaffold_6425:65073-65100 -
  10. scaffold_6500:32230427-32230454 -
  11. scaffold_6656:5618-5645 -
  12. dmo_2614  scaffold_6838:2776-2803 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTTTGCAGCAACTTGTGGAGAAGCTGCCAATGACGAAACGGATTCAGTGGGTAGATTATGCAGCATCTATTCGCCCATATGCAGACTTAAGACACTTCACTGATTGGCTCAGTGGCGTGGCGAGAAGCGTTGCACGAGCAGCAACAACTATAAATAGTCAAAGGCCACAATCAAGGAGTGGTCCAGCCAACACACAGAGGGTATATCAAACTACTGAGCAGCCAACGAGACATGTTAATTCGCCGATAAAA
********************************************************************************....................((....((((.(((((((........)))))))..))))..))************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M046
female body
 M060
embryo
 V041
embryo
 V056
head
 V049
head
..........................................................................................................................AGAAGCGTTGCACGAGCAGCA............................................................................................................ 21 0 9 0.33 3 3 0 0 0 0 0
...TGCAGCAACTTGTGGAGAAGC................................................................................................................................................................................................................................... 21 0 9 0.33 3 1 0 2 0 0 0
................................................................................GCAGACTTAAGACACTTCACTGATTGGC............................................................................................................................................... 28 0 12 0.33 4 0 2 2 0 0 0
......................................................................................................................................................................ACAATCAAGGAGTGGTCCAGC................................................................ 21 0 10 0.30 3 1 1 1 0 0 0
................................................GGGTGGATTATGCAGCATA........................................................................................................................................................................................ 19 2 7 0.29 2 2 0 0 0 0 0
................................................................................GCAGACTTAAGACACTTCACTGATTGG................................................................................................................................................ 27 0 12 0.25 3 0 3 0 0 0 0
...............................................AGGGTGGATTATGCAGCA.......................................................................................................................................................................................... 18 2 10 0.20 2 2 0 0 0 0 0
.......................................................................................................TTGGCTCAGTGGCGTGGCG................................................................................................................................. 19 0 11 0.18 2 2 0 0 0 0 0
..............................................................................................................................................................CAAAGGCCACAATCAAGGAGT........................................................................ 21 0 11 0.18 2 2 0 0 0 0 0
................................................GGGTAGATTATGCAGCATCTA...................................................................................................................................................................................... 21 0 6 0.17 1 0 1 0 0 0 0
..........................................TGCAGTGGGTAGATTATGCTGCAT......................................................................................................................................................................................... 24 2 6 0.17 1 0 0 1 0 0 0
................................................................................GCAGACTTAAGACACTTCACTGA.................................................................................................................................................... 23 0 12 0.17 2 0 1 1 0 0 0
....................................AACGGATTCAGTGGGTAGATTATGC.............................................................................................................................................................................................. 25 0 6 0.17 1 0 0 1 0 0 0
...............................................................................................................................................................................................................................AACGAGACATGTTAATTCGCC....... 21 0 6 0.17 1 0 0 1 0 0 0
...........................................................................................................................................................................................................TATCAAACTACTGAGCAGCCAACGAGAC.................... 28 0 7 0.14 1 0 1 0 0 0 0
...........................................................................................................................................................................................................TATCAAACTACTGAGCAGCCAACG........................ 24 0 8 0.13 1 0 1 0 0 0 0
...............................................AGGGTGGATTATGCAGCAT......................................................................................................................................................................................... 19 2 8 0.13 1 0 0 1 0 0 0
....GCAGCAACTTGTGGAGAAGCC.................................................................................................................................................................................................................................. 21 1 9 0.11 1 0 0 1 0 0 0
..........................................................................................................................................................TAGTCAAAGGCCACAATCAAG............................................................................ 21 0 9 0.11 1 0 1 0 0 0 0
........................................................................................................................................................AATAGTCAAAGGCCACAATCAAGGAG......................................................................... 26 0 9 0.11 1 1 0 0 0 0 0
.........AACTTGTGGAGAAGCTGCCAA............................................................................................................................................................................................................................. 21 0 9 0.11 1 1 0 0 0 0 0
.......................................................................................................................................................AAATAGTCAAAGGCCACAATCAAGG........................................................................... 25 0 9 0.11 1 0 1 0 0 0 0
.........AACTTGTGGAGAAGCTGCCAATG........................................................................................................................................................................................................................... 23 0 9 0.11 1 0 1 0 0 0 0
......................................................................................................................................................................................CCAGCCAACACACAGAGGGTAT............................................... 22 0 10 0.10 1 1 0 0 0 0 0
.............................ATGACGAAACGGATTCAGTGG......................................................................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0
.......................................................................................................................................................................CAATCAAGGAGTGGTCCAGCCA.............................................................. 22 0 10 0.10 1 1 0 0 0 0 0
........................TGCCAATGACGAAACGGATTCAGTGG......................................................................................................................................................................................................... 26 0 10 0.10 1 0 1 0 0 0 0
........................................................................................................................................................................AATCAAGGAGTGGTCCAGCC............................................................... 20 0 10 0.10 1 1 0 0 0 0 0
............................................................................................................................................................GTCAAAGGCCACAATCAAGGAGTG....................................................................... 24 0 10 0.10 1 0 1 0 0 0 0
.............................................................................................................CAGTGGCGTGGCGAGAAGCGT......................................................................................................................... 21 0 10 0.10 1 0 1 0 0 0 0
.........................................................................................................................................................................ATCAAGGAGTGGTCCAGCCA.............................................................. 20 0 10 0.10 1 1 0 0 0 0 0
........................................................................................................................................................................................................GTATATCAAACTACTGAGCAGCC............................ 23 0 10 0.10 1 0 0 1 0 0 0
..................................................................................................................................................ACTATAAATAGTCAAAGGCCA.................................................................................... 21 0 10 0.10 1 0 0 1 0 0 0
...................................................................................................CTGATTGGCTCAGTGGCGTGG................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0
........................................................................................................................................................................................................GTATATCAAACTACTGAGCAG.............................. 21 0 11 0.09 1 0 0 1 0 0 0
............................................................................................................................................................................................................ATCAAACTACTGAGCAGCCA........................... 20 0 11 0.09 1 0 1 0 0 0 0
........................................................................................................................................................................................................GTATATCAAACTACTGAGCAGC............................. 22 0 11 0.09 1 0 0 1 0 0 0
.......................................................................................................TTGGCTCAGTGGCGTGGCGAG............................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0
.....................................................................................................GATTGGCTCAGTGGCGTGGCG................................................................................................................................. 21 0 11 0.09 1 1 0 0 0 0 0
............................................................................................................................................................................AAGGAGTGGTCCAGCCAACACA......................................................... 22 0 11 0.09 1 1 0 0 0 0 0
............................................................................................................................................................................AAGGAGTGGTCCAGCCAACACACAGA..................................................... 26 0 11 0.09 1 1 0 0 0 0 0
................................................................................GCAGACTTAAGACACTTCACTGATTG................................................................................................................................................. 26 0 12 0.08 1 0 1 0 0 0 0
.........................................................................................................................................................................................................TATATCAAACTACTGAGCAGC............................. 21 0 12 0.08 1 1 0 0 0 0 0
.................................................GGTGGATTATGCAGCATA........................................................................................................................................................................................ 18 2 12 0.08 1 0 0 0 0 1 0
.........................................................................................................................................................................................................TATATCAAACTACTGAGCAG.............................. 20 0 12 0.08 1 1 0 0 0 0 0
....................................................................................ACTTAAGACACTTCACTGATTGG................................................................................................................................................ 23 0 13 0.08 1 0 1 0 0 0 0
....................................................................................ACTTAAGACACTTCACTGATTGGCTC............................................................................................................................................. 26 0 13 0.08 1 0 1 0 0 0 0
.................................................................................CGGACTTAAGACACTTCACTGATTGGC............................................................................................................................................... 27 1 13 0.08 1 0 0 1 0 0 0
..................................................................................AGACTTAAGACACTTCACTGATT.................................................................................................................................................. 23 0 13 0.08 1 0 1 0 0 0 0
....................................................................................ACTTAAGACACTTCGCTGATTGG................................................................................................................................................ 23 1 13 0.08 1 0 1 0 0 0 0
............................................................................................CACTTCACTGATTGGCTCAG........................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0
.........................................ATACAGTGGGTGGGTTATG............................................................................................................................................................................................... 19 3 14 0.07 1 1 0 0 0 0 0
TATTGCAGCAAGTTGTGGGGA...................................................................................................................................................................................................................................... 21 3 14 0.07 1 0 0 0 1 0 0
......AGAAACTTGTGAAGAAGCT.................................................................................................................................................................................................................................. 19 2 15 0.07 1 0 0 0 1 0 0
.......................................................................................................TTGGCGGACTGGCGTGGCGA................................................................................................................................ 20 3 16 0.06 1 0 0 0 0 0 1

Anti-sense strand reads

AAAACGTCGTTGAACACCTCTTCGACGGTTACTGCTTTGCCTAAGTCACCCATCTAATACGTCGTAGATAAGCGGGTATACGTCTGAATTCTGTGAAGTGACTAACCGAGTCACCGCACCGCTCTTCGCAACGTGCTCGTCGTTGTTGATATTTATCAGTTTCCGGTGTTAGTTCCTCACCAGGTCGGTTGTGTGTCTCCCATATAGTTTGATGACTCGTCGGTTGCTCTGTACAATTAAGCGGCTATTTT
************************************************************************************************************....................((....((((.(((((((........)))))))..))))..))******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V041
embryo
 V056
head
.........................................................................................................................................................................................CGGTTGTGTGTCTCCCATATAGTTT......................................... 25 0 10 0.90 9 8 0 1 0 0
...........................................................................................CGTGAAGCGACTAACCAAG............................................................................................................................................. 19 3 20 0.60 12 9 3 0 0 0
.......................................................................................................................................................TTTATCAGTTTCCGGTGTTAGTTCCT.......................................................................... 26 0 9 0.56 5 3 0 2 0 0
...............................................................GTAGATAAGCGGGTATACGTCTGAAT.................................................................................................................................................................. 26 0 13 0.54 7 5 1 0 1 0
........................................................................................................................................................................................TCGGTTGTGTGTCTCCCATATAGTTT......................................... 26 0 10 0.50 5 3 0 2 0 0
.............................................................................................................................................................................................TGTGTGTCTCCCATATAGTTTGAT...................................... 24 0 11 0.45 5 5 0 0 0 0
..........................................................................................................................................................................................GGTTGTGTGTCTCCCATATAGTTT......................................... 24 0 11 0.45 5 4 0 1 0 0
.........................................................................................................................................CGTCGTTGTTGATATTTATCAGTTT......................................................................................... 25 0 9 0.44 4 4 0 0 0 0
.....................TCGACGGTTACTGCTTTGCCT................................................................................................................................................................................................................. 21 0 10 0.30 3 0 1 2 0 0
.........................................................................................................................................................................................CGGTTGTGTGTCTCCCATATAGTGT......................................... 25 1 10 0.30 3 0 0 3 0 0
..........................................................................................CCGTGAAGCGACTAACCAAG............................................................................................................................................. 20 3 15 0.27 4 2 2 0 0 0
...............................................................................ACGTCTGAATTCTGTGAAGTG....................................................................................................................................................... 21 0 12 0.25 3 0 3 0 0 0
......................................................................................................................................................ATTTATCAGTTTCCGGTGTTAGTTCCT.......................................................................... 27 0 9 0.22 2 2 0 0 0 0
........................................................................................................................................................TTATCAGTTTCCGGTGTTAGTTCCT.......................................................................... 25 0 9 0.22 2 1 0 1 0 0
.................................GCTTTGCCTAAGTCACCCATCTAATACGT............................................................................................................................................................................................. 29 0 5 0.20 1 1 0 0 0 0
.....................................TGCCTAAGTCACCCATCTAATACGT............................................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0
....................................................................................................................................GTGCTCGTCGTTGTTGATA.................................................................................................... 19 0 10 0.20 2 0 2 0 0 0
.................................................................................................................................................................................CACCAGGTCGGTTGTGTGTCT..................................................... 21 0 11 0.18 2 0 1 1 0 0
..................................................................................................................................................................................ACCAGGTCGGTTGTGTGTCTC.................................................... 21 0 11 0.18 2 0 2 0 0 0
......................................................................................................................................................................................................................ACTCGTCGGTTGCTCTGTACA................ 21 0 6 0.17 1 0 1 0 0 0
..........................................................ACGTCGTAGATAAGCGGGTATACGTCT...................................................................................................................................................................... 27 0 12 0.17 2 2 0 0 0 0
............................................................................................................................................................................................................................CGGTTGCTCTGTACAATTAAGCGGCTATT.. 29 0 6 0.17 1 1 0 0 0 0
............................TTACTGCTTTGCCTAAGTCACCCA....................................................................................................................................................................................................... 24 0 6 0.17 1 1 0 0 0 0
.....................................................................AAGCGGGTATACGTCTGAATTCTGT............................................................................................................................................................. 25 0 12 0.17 2 2 0 0 0 0
...................................TTTGCCTAAGTCACCCATCTA................................................................................................................................................................................................... 21 0 6 0.17 1 0 0 1 0 0
..........................GGTTACTGCTTTGCCTAAGTCACCCAT...................................................................................................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0
......................................GCCTAAGTCACCCATCTAATA................................................................................................................................................................................................ 21 0 6 0.17 1 1 0 0 0 0
.....................................................................................................................................................................................................................GACTCGTCGGTTGCTCTGTACAATT............. 25 0 6 0.17 1 0 1 0 0 0
..................................................................................................................................................................................................................GATGACTCGTCGGTTGCTCTGTACAAT.............. 27 0 6 0.17 1 1 0 0 0 0
...........................................................................................TGTGAAGTGACTAACCGAGTC........................................................................................................................................... 21 0 13 0.15 2 0 2 0 0 0
..............................................................CGTAGATAAGCGGGTATACGTCTGAAT.................................................................................................................................................................. 27 0 13 0.15 2 1 0 1 0 0
..................................................................................................................................................................................................................GATGACTCGTCGGTTGCTCTTTACAA............... 26 1 7 0.14 1 1 0 0 0 0
...........GAACACCTCTTCGACGGTTACTGCTTT..................................................................................................................................................................................................................... 27 0 8 0.13 1 1 0 0 0 0
...........................................................................................CGTGAAGCGACTAACCAAGTC........................................................................................................................................... 21 3 16 0.13 2 2 0 0 0 0
...........................................................................................................................CTTCGCAACGTGCTCGTCGTT........................................................................................................... 21 0 9 0.11 1 0 1 0 0 0
.................................................................................................................................AACGTGCTCGTCGTTGTTGATA.................................................................................................... 22 0 9 0.11 1 1 0 0 0 0
......................................................................................................................................................CTTTATCAGTTTCCGGTGTTAGTTCCT.......................................................................... 27 1 9 0.11 1 1 0 0 0 0
........................................................................................................................................CCGTCGTTGTTGATATTTATCAGTT.......................................................................................... 25 1 9 0.11 1 0 0 1 0 0
........................................................................................................................................................CTATCAGTTTCCGGTGTTAGTTCCT.......................................................................... 25 1 9 0.11 1 1 0 0 0 0
...........GAACACCTCTTCGACGGTTACTGCT....................................................................................................................................................................................................................... 25 0 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................TATCAGTTTCCGGTGTTAGTTCCTCAC....................................................................... 27 0 9 0.11 1 1 0 0 0 0
..................................................................................................................................ACGTGCTCGTCGTTGTTGATATT.................................................................................................. 23 0 9 0.11 1 0 1 0 0 0
.................................................................................................................................AACGTGCTCGTCGTTGTTGA...................................................................................................... 20 0 9 0.11 1 1 0 0 0 0
...................................................................................................................................................GATATTTATCAGTTTCCGGTGTTAGTT............................................................................. 27 0 9 0.11 1 1 0 0 0 0
.....................................................................................................................................TGCTCGTCGTTGTTGATATTTATCAGT........................................................................................... 27 0 9 0.11 1 1 0 0 0 0
.........................................................................................................................................CGTCGTTGTTGATATTTATCAGTGT......................................................................................... 25 1 9 0.11 1 0 0 1 0 0
........GTTGAACACCTCTTCGACGGTTACT.......................................................................................................................................................................................................................... 25 0 9 0.11 1 0 0 1 0 0
.................................................................................................................................AACGTGCTCGTCGTTGTTGATATT.................................................................................................. 24 0 9 0.11 1 0 1 0 0 0
........................................................................................................................................TCGTCGTTGTTGATATTTATCAGTTT......................................................................................... 26 0 9 0.11 1 1 0 0 0 0
....................TTCGACGGTTACTGCTTTGCCTAAGT............................................................................................................................................................................................................. 26 0 9 0.11 1 1 0 0 0 0
.................................................................................................................................AACGTGCTCGTCGTTGTTGAT..................................................................................................... 21 0 9 0.11 1 0 1 0 0 0
................CCTCTTCGACGGTTACTGCTT...................................................................................................................................................................................................................... 21 0 10 0.10 1 0 1 0 0 0
...................................................................................................................................CGTGCTCGTCGTTGTTGATAT................................................................................................... 21 0 10 0.10 1 0 1 0 0 0
.................................................................................................................................................................................................................................GCTCTGTACAATTAAGCGGCT..... 21 0 10 0.10 1 1 0 0 0 0
......................................................................................................................................................................................GGTCGGTTGTGTGTCTCCCATATAGTTG......................................... 28 1 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................................................GTCGGTTGTGTGTCTCCCATATAGTT.......................................... 26 0 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................................CGGTTGTGTGTCTCCCATATAGTT.......................................... 24 0 10 0.10 1 1 0 0 0 0
.....................................................................................................................................TGCTCGTCGTTGTTGATATTT................................................................................................. 21 0 10 0.10 1 0 1 0 0 0
...................................................................................................................................CGTGCTCGTCGTTGTTGATATGT................................................................................................. 23 1 10 0.10 1 0 0 1 0 0
....................................................................................................................CACCGCTCTTCGCAACGTGCTCGTC.............................................................................................................. 25 0 10 0.10 1 0 0 1 0 0
..............CACCTCTTCGACGGTTACTGC........................................................................................................................................................................................................................ 21 0 10 0.10 1 0 0 1 0 0
................................................................................................................ACCGCACCGCTCTTCGCAACGTGCTCGT............................................................................................................... 28 0 10 0.10 1 1 0 0 0 0
...........................................................................................................................................................TCAGTTTCCGGTGTTAGTTCCT.......................................................................... 22 0 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................................................CTCGGTTGTGTGTCTCCCATATAGTTT......................................... 27 1 10 0.10 1 0 1 0 0 0
......................CGACGGTTACTGCTTTGCCTA................................................................................................................................................................................................................ 21 0 10 0.10 1 0 0 1 0 0
.............................................................................................................................................................................................TGTGTGTCTCCCATATAGTTTGATGAC................................... 27 0 11 0.09 1 1 0 0 0 0
......................................................................................................................................................................................................CCCATATAGTTTGATGACTCG................................ 21 0 11 0.09 1 1 0 0 0 0
................................................................................................................................................................................TCACCAGGTCGGTTGTGTGTCT..................................................... 22 0 11 0.09 1 0 0 1 0 0
............................................................................................................................................................................................TTGTGTGTCTCCCATATAGTTTGA....................................... 24 0 11 0.09 1 1 0 0 0 0
...........................................................................................................................................................................................GTTGTGTGTCTCCCATATAGTTT......................................... 23 0 11 0.09 1 1 0 0 0 0
..........................................................................................................................................................................................GGTTGTGTGTCTCCCATATAGTTTGAT...................................... 27 0 11 0.09 1 1 0 0 0 0
............................................................................................................................................................................................TTGTGTGTCTCCCATATAGTTTGAT...................................... 25 0 11 0.09 1 1 0 0 0 0
....................................................................................................................CACCGCTCTTCGCAACGTGCT.................................................................................................................. 21 0 11 0.09 1 1 0 0 0 0
..............................................................................................................................................................ATTTCCGGTGTTAGTTCCTCAC....................................................................... 22 1 11 0.09 1 1 0 0 0 0
.............................................................................................................................................................................................TGTGTGTCTCCCATATAGTTTGATGACT.................................. 28 0 11 0.09 1 1 0 0 0 0
.............................................................................................................................................................................................TGTGTGTCTCCCATATAGTTT......................................... 21 0 11 0.09 1 0 1 0 0 0
...............................................................................................................................................................................CTCACCAGGTCGGTTGTGTGT....................................................... 21 0 11 0.09 1 0 0 1 0 0
...................................................................................................................GCACCGCTCTTCGCAACGTGCTCGT............................................................................................................... 25 0 11 0.09 1 1 0 0 0 0
......................................................................................................................................................................................................................................GTACAATTAAGCGGCTATTTT 21 0 11 0.09 1 0 1 0 0 0
.............................................................................ATACGTCTGAATTCTGTGAAG......................................................................................................................................................... 21 0 12 0.08 1 0 1 0 0 0
..............................................................................TACGTCTGAATTCTGTGAAGTGACT.................................................................................................................................................... 25 0 12 0.08 1 0 1 0 0 0
......................................................................AGCGGGTATACGTCTGAATTCTGT............................................................................................................................................................. 24 0 12 0.08 1 0 1 0 0 0
.............................................................................................TGAAGCGACTAACCAAGTCAC......................................................................................................................................... 21 2 12 0.08 1 1 0 0 0 0
...................................................................................................................................................................................AAAGGTCGGTTGTGTGTCTC.................................................... 20 2 12 0.08 1 1 0 0 0 0
............................................................GTCGTAGATAAGCGGGTATACGTCT...................................................................................................................................................................... 25 0 12 0.08 1 1 0 0 0 0
................................................................................CGTCTGAATTCTGTGAAGTGA...................................................................................................................................................... 21 0 12 0.08 1 0 1 0 0 0
........................................................................CGGGTATACGTCTGAATTCTGT............................................................................................................................................................. 22 0 12 0.08 1 0 0 0 1 0
.........................................................................GGGTATACGTCTGAATTCTGT............................................................................................................................................................. 21 0 12 0.08 1 1 0 0 0 0
..............................................................................TACGTCTGAATTCTGTGAAGT........................................................................................................................................................ 21 0 12 0.08 1 0 1 0 0 0
..........................................................................................CCGTGAAGCGACTAACCAAGTCAC......................................................................................................................................... 24 3 12 0.08 1 1 0 0 0 0
...............................................................GTAGATAAGCGGGTATACGTCTGAATT................................................................................................................................................................. 27 0 13 0.08 1 1 0 0 0 0
.................................................................AGATAAGCGGGTATACGTCTGAATT................................................................................................................................................................. 25 0 13 0.08 1 0 1 0 0 0
.......................................................................GCGGGTATACGTCTGAATTCT............................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0
..............................................................CGTAGATAAGCGGGTGTACGTCTGAAT.................................................................................................................................................................. 27 1 13 0.08 1 1 0 0 0 0
...........................................................CGTCGTAGATAAGCGGGTATA........................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0
....................................................................TAAGCGGGTATACGTCTGAATTCTG.............................................................................................................................................................. 25 0 13 0.08 1 1 0 0 0 0
..........................................................................................CCGTGAAGCGACTAACCAAGTC........................................................................................................................................... 22 3 13 0.08 1 1 0 0 0 0
..........................................................................................CCGTGAAGCGACTAACCAAGT............................................................................................................................................ 21 3 13 0.08 1 0 1 0 0 0
..............................................................CGTAGATAAGCGGGTATACGTCTGAATT................................................................................................................................................................. 28 0 13 0.08 1 1 0 0 0 0
......................................................................AGCGGGTATACGTCTGAATTC................................................................................................................................................................ 21 0 13 0.08 1 0 1 0 0 0
..............................................................CGTAGATAAGCGGGTATACGTC....................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0
...........................................................................................................................................................................................................................TCGGTGGGACTGTACAATT............. 19 3 20 0.05 1 1 0 0 0 0
...........................................................................................CGTGAAGCGACTAACCAAGT............................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0
.......................................CCTAAGCGACCCATCAAAT................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1
...........................................................................................................................................................CCAGGTTCCGGGGTTAGTT............................................................................. 19 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6838:2696-2946 + dmo_2614 TTTTGCAGCAACTTGTGGAGAAGCTGCCAATGACGAAACGGATTCAGTGGGTAGATTATGCAGCATCTATTCGCCCATATGCAGACTTAAGACACTTCACTGATTGGCTCAGTGGCGTGGCGAGAAGCGTT-G--------CACGAGCAGCAACAACTATAAATAGTCAAAGGC-----CAC---------------------AATCAAGGAGTGGTCCAGCCAACACACAGAGGG-TATATCAAA----------------------CTACTGAGCAGCC---AACGAGACATGTTAATTCGCCGATAAA---A--------
droWil2 scf2_1100000004839:128295-128562 + TGCTGGATCAATTAGTTTGAAAAATGCCAATGTCAAAACGCATGCAGTGGCAAGAGTTTTCATCCCAAATACATCCATACGCCAATTTGAAGCATTTTAGTAATTGGTTAAATAGTATAGCAAGAACGATT-G--------AGAAGGTAACATTAATGACAACTTCGAACAGGCCCACTTCAAAAGGTGATCATCATCACAATC---CAAAACTGGTAATGCAAACAAATACGGGAGAGTATCAAAAGAAGGGTA-AGAAATATACAAAAGTTT-------------------------------GCA---CCGA--------
dp5 Unknown_group_492:4030-4100 - TTTTGAAGGAGCTTGTGGCCAAACTCCCTACAAGCAAGCGAGTGGAGTGGGCAAGGCATGCTGCAACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_11480:83-204 + TTCTGGAAGAACTTGTGGCCAAACTCCGTACAAGCAAGCGAGTGGAGTGGGCAAGGCATGCTGTGACGATTATACCTTTCCCAACTATTGTGCATTTTAGTGCGTGGTGCGCTATCGTGGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12911:1009273-1009513 + CGATGGAAGAACTTGTGGCCAAGCTCCCAATAAGCAAACGAGTGGACTGGGCAAGGCACGCTGCAACTATTCAGCCCTATCCGACGATGGTGGACTTCAGTTCGTGGTTGACGAAACTAGCCTACGTGGTCTGCGTGGTGGCGGACATTGATGGAAAGGAG------------------TCA---------------------AGGC---GT-------------------------------------CGATTGCTTCATGCCAGCGCCGACCGAGAGAAGGACGAGCAACAGGACAGCTGCCGCAG---AAATTGTCCAAT
droBip1 scf7180000394437:767-994 - TAATGGAGGAGCTGATAGCCAAGTTGCCGCTAAGCAAGAGGTTGGACTGGGCAAGGCACGCGGCCACGATGCAGCCGTATCCGACGGTGGCGCACCTGAGCGAGTGGCTCCATGAATTCGCCAAACTGGTGA-----GTCACGGACGTCGGAGCCAGGGAACAA---------------CCG---------------------AAGC---GA-------------------------------------AGGATTCTGCACGCGAATAGTGTTCGCGAGGA---GGAGCGATATGTCGACCGCCCCAG---ATGC--------
droKik1 scf7180000302263:15966-16194 - TGATGGAGGAGCTGGTCGCCATGTTGCCTGTGAGCAAAAGGCTGGAATGGGCGAAGCACGCGGCTACGATACAGCCATACACGACAGTGGTGCACCTGAGCGAGTGGCTTCATGAATTCGCTAAATTGGTGTGCACTGTCACGGACGTCGGAATCAAGGAGCAC---------------CCG---------------------AAGC---GA-------------------------------------AAGGTT-TGCACGCGAATAGTGTTCGCAAGGA---GGAGCGGTATGCAGACCG---CCCAAA---A--------
droFic1 scf7180000452364:18811-18919 + TAATGGAGGAGCTTGTGGCGAAGCTTCCTACGAGTAGGCGAGTAGATTGGGCCAGGCACGCTGCATCGATCAGGCCCTTTCCCACTGTAGCGCACTTCAGCGCGTGGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000486848:4865-5106 - TGATAGAGAGCTTAGTAGGTAAGATGCCACTCAGTAAGCGAGTTCAATGGATTGAATATTCATCGCCAATTCAGCCATATCCTAATTTAGACCACTTCAGCAATTGGCTGAGCACTATGGCAAGAAGCATT-G--------CAGG-GCAACCATTGCAG--CCAGTTAATATTAAACAGACGAAGAATGA---CAAAGGCTTAC---AAAAATCTATTTTACATTCTTCGAACAATGCACCTAAAGGAA-------------------------------------------------ACAA---AAAGGA---A--------
droRho1 scf7180000776864:3231-3478 - TGATAGAGAGCCTGGTAGGTAAGATGCCACTCAGCAAGCGAATTCAATGAATTGAGCATTCATCGCAAATTCAGCCTTTTCCAAATTTACATCACTTTAGCAACTGGTTAAGCACTAAGGCATGAAGCATT-G--------TAAGAACAACCATTTCAACCCCAGTAAATTCAAAACAGTCAAAGAATGAACCCAAGTGTCCAC---TTGAATCAGTATTACATTCTTCTAGGAAAGAAACTAAAGGAA-------------------------------------------------ACAA---GATAAA---G--------
droBia1 scf7180000297028:575-795 - TAATGGAGGAGCTGATAGCCAAGTTGCCGCTAAGCAAGAGGTTGGACTGGGCAAGGCACGCGGCCACGATACAGCAGTATCCGACGGTGGCGCACCTGAGCGAGTGGCTCCATGAATTCGCCA------------CTGTCACGGAAGCCGGAGCCAGGGAACAA---------------CCG---------------------AAGC---GA-------------------------------------AGGATTCTGCACGCGAATAGTGTTCGCGAGGA---GGAGCGATATGTCGACCGCCCCAG---ATGC--------
droTak1 scf7180000415278:122588-122835 + TGATAGAGAGCCTGGTAGGTAAAATGCCACTCAGTAAGCGGGTTCAATGGATCGAGCATTCATCGCAAATTCAGCTTTATCCAAATTTAGATCACTTCAGCAATTGGCTGAGCACTATGGCAAGAAGCATT-G--------CAAGGGCAACCGTATCAGCACCGGTAAATACCAAACAGACGAAGAATGAGCAAAAGGGTCCGT---TGAAATCAATTTTACATTCTTCCAAGAATGAAACTAAAGTGA-------------------------------------------------ACAA---GATGGA---G--------
droEug1 scf7180000407284:4362-4602 - TGATGGAAGAGCTGATCGCCAAGCTACCACTGAGCAAAAGGTTGGATTGGGCCAGGCACGCCGCCGTAATAGGGTGCTACCCAACTGTCGCGCACTTGAGCGAATGGCTAAACGAACTCGCTAAATTAGTGTGCACTATTACGAGCAGCGACAGCAAGGAT------------------CCT---------------------AAGC---GT-------------------------------------AGGGTATTGCACGCCAGCACCAGTCAGAAGGATCAGGATCTATTTGAAGATCATCCCAG---GAGTTGCCCAAT
dm3 chr3LHet:2050978-2051210 - TCATGGAGGAGCTTGTGGCCAAGCTGCCAACGAGCAAGCGAGTGGACTGGGCCAGGCATGCTGCAACGATTGCGCCCTTTCCCACTGTAGTCCACTTCAGCGCGTGGCTACAGGAGTACGCAAACGTGGTGTGCACGGTTTTGGACGTCGAGGGAAAGGAG------------------CCG---------------------AGGC---GT-------------------------------------CGACTTCTACATGCAAGCGTCGACCATAATGAATGCGATCAACAGGATGATCGGCATGG---AGGT--------
droSim2 2l:22625722-22625868 + TCATGGAGGAGCTTGCGGCCAAGCTTCCAACGAGCAAGCTAGTGGACTGGGCCAGGCATGCTGCAATGATTTTGCCCTTTCCCACTGTTGTCCACTTCAGCTTGTGGCTACAGGTCGCAGCCAGAGACGAT-G--------TGCGGGCACAAACGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_11838:982-1128 + TCATGGAGGAGCTTGCGGCCAAGCTTCCAACGAGCAAGCTAGTGGACTGGGCCAGGCATGCTGCAACGATTTTGCCCTTTCCCACTGTTGTCCACTTCAGCTTGTGGCATCAGGTCGCAGCCAGAGACGAT-C--------TGCGAGCACAAACGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:21812051-21812298 - TGATAGAAAGCTTAGTAGGAAAGATGCTACTTAGCAAACGTATTCAATGGATTGAATATTTATCACAGATACTGTCATAACCCAATTTAGACGACTTCAGCCGTTGGTTAAGTAATATGGCTAGAAGTATA-G--------CAAGGGCCATAGTTACAGATCCAATAAATAATAAAACTTCAACGGGTGAATATAAAGGTCCGC---ACAAGTCTGTGCTTCATTCCACAAAAAGAGAGCAAGGTCAGA-------------------------------------------------ATAA---GGTGAA---A--------
droEre2 scaffold_4784:24684656-24684903 - TGATAGAAAGCTTAGTAGGAAAGATGCCACTAAGCAAACGTATTCAATGAATTAAATATTCATCACAGATACTGCCATATCCCAATATTGACGACTTCAGCCGTTGGTTAAGTAATATGGCTAGAAGAATA-A--------CAAGGGCCACAGTTACAGGTCCAATAAAGAATAAAACTCCAAAGGGTGAATATAAAGGTCCAC---AATAGTCTGTGCTTCATTCCACTAGAAGAGAACAAGGTCAGA-------------------------------------------------ATAA---AGTAGA---A--------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTTTGCAGCAACTTGTGGAGAAGCTGCCAATGACGAAACGGATTCAGTGGGTAGATTATGCAGCATCTATTCGCCCATATGCAGACTTAAGACACTTCACTGATTGGCTCAGTGGCGTGGCGAGAAGCGTT-G--------CACGAGCAGCAACAACTATAAATAGTCAAAGGC-----CAC---------------------AATCAAGGAGTGGTCCAGCCAACACACAGAGGG-TATATCAAA----------------------CTACTGAGCAGCC---AACGAGACATGTTAATTCGCCGATAAA---A--------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................AGAAGCGTT-G--------CACGAGCAGCA...........................................................................................................................................................................2190.333000003
...TGCAGCAACTTGTGGAGAAGC...........................................................................................................................................................................................................................................................................................................2190.333000021
................................................................................GCAGACTTAAGACACTTCACTGATTGGC.......................................................................................................................................................................................................................28120.334200020
....................................................................................................................................................................................AC---------------------AATCAAGGAGTGGTCCAGC.....................................................................................................21100.303100011
................................................................................GCAGACTTAAGACACTTCACTGATTGG........................................................................................................................................................................................................................27120.253300000
.......................................................................................................TTGGCTCAGTGGCGTGGCG.........................................................................................................................................................................................................19110.182000002
.......................................................................................................................................................................CAAAGGC-----CAC---------------------AATCAAGGAGT.............................................................................................................21110.182000002
................................................GGGTAGATTATGCAGCATCTA..............................................................................................................................................................................................................................................................2160.171100000
................................................................................GCAGACTTAAGACACTTCACTGA............................................................................................................................................................................................................................23120.172100010
....................................AACGGATTCAGTGGGTAGATTATGC......................................................................................................................................................................................................................................................................2560.171000010
............................................................................................................................................................................................................................................................................................AACGAGACATGTTAATTCGCC..................2160.171000010
...............................................................................................................................................................................................................................................TATCAAA----------------------CTACTGAGCAGCC---AACGAGAC...............................2870.141100000
...............................................................................................................................................................................................................................................TATCAAA----------------------CTACTGAGCAGCC---AACG...................................2480.131100000
....GCAGCAACTTGTGGAGAAGCC..........................................................................................................................................................................................................................................................................................................2190.111000010
...................................................................................................................................................................TAGTCAAAGGC-----CAC---------------------AATCAAG.................................................................................................................2190.111100000
.................................................................................................................................................................AATAGTCAAAGGC-----CAC---------------------AATCAAGGAG..............................................................................................................2690.111000001
.........AACTTGTGGAGAAGCTGCCAA.....................................................................................................................................................................................................................................................................................................2190.111000001
................................................................................................................................................................AAATAGTCAAAGGC-----CAC---------------------AATCAAGG................................................................................................................2590.111100000
.........AACTTGTGGAGAAGCTGCCAATG...................................................................................................................................................................................................................................................................................................2390.111100000
.........................................................................................................................................................................................................................CCAGCCAACACACAGAGGG-TAT...................................................................................22100.101000001
.............................ATGACGAAACGGATTCAGTGG.................................................................................................................................................................................................................................................................................21100.101000001
.....................................................................................................................................................................................C---------------------AATCAAGGAGTGGTCCAGCCA...................................................................................................22100.101000001
........................TGCCAATGACGAAACGGATTCAGTGG.................................................................................................................................................................................................................................................................................26100.101100000
...........................................................................................................................................................................................................AATCAAGGAGTGGTCCAGCC....................................................................................................20100.101000001
.....................................................................................................................................................................GTCAAAGGC-----CAC---------------------AATCAAGGAGTG............................................................................................................24100.101100000
.............................................................................................................CAGTGGCGTGGCGAGAAGCGT.................................................................................................................................................................................................21100.101100000
............................................................................................................................................................................................................ATCAAGGAGTGGTCCAGCCA...................................................................................................20100.101000001
...........................................................................................................................................................................................................................................G-TATATCAAA----------------------CTACTGAGCAGCC---.......................................23100.101000010
...........................................................................................................................................................ACTATAAATAGTCAAAGGC-----CA..............................................................................................................................................21100.101000010
...................................................................................................CTGATTGGCTCAGTGGCGTGG...........................................................................................................................................................................................................21110.091000001
...........................................................................................................................................................................................................................................G-TATATCAAA----------------------CTACTGAGCAG............................................21110.091000010
................................................................................................................................................................................................................................................ATCAAA----------------------CTACTGAGCAGCC---A......................................20110.091100000
...........................................................................................................................................................................................................................................G-TATATCAAA----------------------CTACTGAGCAGC...........................................22110.091000010
.......................................................................................................TTGGCTCAGTGGCGTGGCGAG.......................................................................................................................................................................................................21110.091000001
.....................................................................................................GATTGGCTCAGTGGCGTGGCG.........................................................................................................................................................................................................21110.091000001
...............................................................................................................................................................................................................AAGGAGTGGTCCAGCCAACACA..............................................................................................22110.091000001
...............................................................................................................................................................................................................AAGGAGTGGTCCAGCCAACACACAGA..........................................................................................26110.091000001
................................................................................GCAGACTTAAGACACTTCACTGATTG.........................................................................................................................................................................................................................26120.081100000
.............................................................................................................................................................................................................................................TATATCAAA----------------------CTACTGAGCAGC...........................................21120.081000001
.............................................................................................................................................................................................................................................TATATCAAA----------------------CTACTGAGCAG............................................20120.081000001
....................................................................................ACTTAAGACACTTCACTGATTGG........................................................................................................................................................................................................................23130.081100000
....................................................................................ACTTAAGACACTTCACTGATTGGCTC.....................................................................................................................................................................................................................26130.081100000
..................................................................................AGACTTAAGACACTTCACTGATT..........................................................................................................................................................................................................................23130.081100000
............................................................................................CACTTCACTGATTGGCTCAG...................................................................................................................................................................................................................20130.081000001
droWil2
TGCTGGATCAATTAGTTTGAAAAATGCCAATGTCAAAACGCATGCAGTGGCAAGAGTTTTCATCCCAAATACATCCATACGCCAATTTGAAGCATTTTAGTAATTGGTTAAATAGTATAGCAAGAACGATT-G--------AGAAGGTAACATTAATGACAACTTCGAACAGGCCCACTTCAAAAGGTGATCATCATCACAATC---CAAAACTGGTAATGCAAACAAATACGGGAGAGTATCAAAAGAAGGGTA-AGAAATATACAAAAGTTT-------------------------------GCA---CCGA--------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................AATAGTATAGCAAGAACGATT-G--------A.....................................................................................................................................................................................2312.00202000
................................................................................................................................................................................................................AAAACTGGTAATGCAAACAAATACGGGA.......................................................................................2811.00101000
..............................................................................................................AATAGTATAGCAAGAACGATT-G--------AGAAGG................................................................................................................................................................................2811.00101000
.....................................................................................................................................................................................................................TGGTAATGCAAACAAATACGGGAGAG....................................................................................2611.00101000
............................................................................................................................AACGATT-G--------AGAAGGTAACATTAATGAC...................................................................................................................................................................2711.00100010
.............................................................................TACGCCAATTTGAAGCATTTTAGTAAT...........................................................................................................................................................................................................................2711.00101000
.............................................................................................................AAATAGTATAGCAAGAACGATT-G--------AGA...................................................................................................................................................................................2611.00101000
.............................................................................................................AAATAGTATAGCAAGAACGATT-G--------A.....................................................................................................................................................................................2411.00100010
.....................................................................................................................................................................................................................TGGTAATGCAAACAAATACGGGAG......................................................................................2411.00101000
TGCTGGATCAATTAGTTTGAAAAATGCC.......................................................................................................................................................................................................................................................................................................2811.00101000
..........................................................................................................................................................................................................................ATGCAAACAAATACGGGAGAG....................................................................................2120.50101000
..........................................................TTCATCCCAAATACATCCATACGC.................................................................................................................................................................................................................................................2420.50101000
..............................................................................................................................................................ACAACTTCGAACAGGCCCACTTCAAAAGG........................................................................................................................................2920.50101000
..............................................................................................................AATAGTATAGCAAGAACGATT-G--------......................................................................................................................................................................................2290.44402020
........................................................................................................................................................TTAATGACAACTTCGAACAGGCCCACT................................................................................................................................................2730.33101000
...............................................TGGCAAGAGTTTTCATCCCAAATACA..........................................................................................................................................................................................................................................................2630.33100010
.........................................................................................................................................................TAATGACAACTTCGAACAGGCCCAC.................................................................................................................................................2530.33101000
......................................................................................................................................................CATTAATGACAACTTCGAACAGGCCCACT................................................................................................................................................2930.33101000
.........................................................................................................................................................TAATGACAACTTCGAACAGGCCCACTT...............................................................................................................................................2730.33101000
...................................................................................................................................................TAACATTAATGACAACTTCGAACAGG......................................................................................................................................................2650.20101000
....................................................................................................................................................................................................TCACAATC---CAAAACTGGTAATGCAAACAA...............................................................................................2960.17101000
......................................CGCATGCAGTGGCAAGAGTTTTCA.....................................................................................................................................................................................................................................................................2470.14100010
.................................................................................................................................................................................................................................................................GAAATATACAAAAGTTT-------------------------------GCA---CC..........2280.13101000
...........................................................................................................TTAAATAGTATAGCAAGAACGATT-G--------......................................................................................................................................................................................2590.11100100
...............................................................................................................ATAGTATAGCAAGAACGATT-G--------......................................................................................................................................................................................2190.11101000
dp5
TTTTGAAGGAGCTTGTGGCCAAACTCCCTACAAGCAAGCGAGTGGAGTGGGCAAGGCATGCTGCAACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................AAGCAAGCGAGTGGAGTGGG................................................................................................................................................................................................................................................................................2060.6740400000000
.............TGTGGCCAAACTCCCTACAAGCAAGCGA..........................................................................................................................................................................................................................................................................................2850.4020000000020
............................TACAAGCAAGCGAGTGGAGTGG.................................................................................................................................................................................................................................................................................2260.3320200000000
.........................CCCTACAAGCAAGCGAGTGGAG....................................................................................................................................................................................................................................................................................2240.2510100000000
...........................CTACAAGCAAGCGAGTGGAGTGG.................................................................................................................................................................................................................................................................................2340.2510100000000
...........................CTACAAGCAAGCGAGTGGAGT...................................................................................................................................................................................................................................................................................2140.2510100000000
...............................................TGGGCAAGGCATGCTGCAACGA..............................................................................................................................................................................................................................................................2250.2010100000000
...............................AAGCAAGCGAGTGGAGTGGA................................................................................................................................................................................................................................................................................2060.1710100000000
...............................AAGCAAGCGAGTGGAGTGGGCAAG............................................................................................................................................................................................................................................................................2460.1710100000000
...............................AAGCAAGCGAGTGGAGTGGGC...............................................................................................................................................................................................................................................................................2160.1710000001000
..................................CAAGCGAGTGGAGTGGGCAAGG...........................................................................................................................................................................................................................................................................2260.1710100000000
............................TACAAGCAAGCGAGTGGAGTGGG................................................................................................................................................................................................................................................................................2360.1710100000000
......................................CGAGTGGAGTGGGCAAGGC..........................................................................................................................................................................................................................................................................1970.1410100000000
droPer2
TTCTGGAAGAACTTGTGGCCAAACTCCGTACAAGCAAGCGAGTGGAGTGGGCAAGGCATGCTGTGACGATTATACCTTTCCCAACTATTGTGCATTTTAGTGCGTGGTGCGCTATCGTGGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................GACGATTATACCTTTCCCAACTATTG.........................................................................................................................................................................................................................................2680.383030000
.....GAAGAACTTGTGGCCAAACTCCGT......................................................................................................................................................................................................................................................................................................2480.131010000
.....GAAGAACTTGTGGCCAAACTCC........................................................................................................................................................................................................................................................................................................2280.131010000
.........AACTTGTGGCCAAACTCCGTAC....................................................................................................................................................................................................................................................................................................2280.131010000
..........................CGTACAAGCAAGCGAGTGGAGTGG.................................................................................................................................................................................................................................................................................2490.111010000
..........................................................................................TGCATTTTAGTGCGTGGTGC.....................................................................................................................................................................................................................2090.111010000
..............................................................................................TTTTAGTGCGTGGTGCGCTATC...............................................................................................................................................................................................................2290.111010000
......................ACTCCGTACAAGCAAGCGAGTGG......................................................................................................................................................................................................................................................................................2390.111010000
................................................................GACGATTATACCTTTCCCAACT.............................................................................................................................................................................................................................................22100.101010000
................................................................GACGATTATACCTTTCCCAACTA............................................................................................................................................................................................................................................23100.101010000
................................................................GACGATTATACCTTTCCCAAC..............................................................................................................................................................................................................................................21100.101010000
.......................................................................ATACCTTTCCCAACTATTGTG.......................................................................................................................................................................................................................................21110.091010000
....................................AGCGAGTGGAGTGGGCAAGGCATG.......................................................................................................................................................................................................................................................................24120.081010000
................................AGCAAGCGAGTGGAGTGGGCAAGGC..........................................................................................................................................................................................................................................................................25120.081010000
...............................AAGCAAGCGAGTGGAGTGGGC...............................................................................................................................................................................................................................................................................21120.081010000
droAna3
CGATGGAAGAACTTGTGGCCAAGCTCCCAATAAGCAAACGAGTGGACTGGGCAAGGCACGCTGCAACTATTCAGCCCTATCCGACGATGGTGGACTTCAGTTCGTGGTTGACGAAACTAGCCTACGTGGTCTGCGTGGTGGCGGACATTGATGGAAAGGAG------------------TCA---------------------AGGC---GT-------------------------------------CGATTGCTTCATGCCAGCGCCGACCGAGAGAAGGACGAGCAACAGGACAGCTGCCGCAG---AAATTGTCCAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................ATAAGCAAACGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................23203.857725379150
.............................ATAAGCAAACGAGTGGACTGGG................................................................................................................................................................................................................................................................................22202.85574361142
..........................................................................................................................................................................................................................................................GATTGCTTCATGCCAGCGCCGA...................................................2212.002200000
..........................................................................................................................................................................................................................................................GATTGCTTCATGCCAGCGCCGACC.................................................2411.001100000
..........................................................................................................................................................................................................................................................GATTGCTTCATGCCAGCGCC.....................................................2011.001100000
......................................................................................................................AGCCTACGTGGTCTGCGTGGTGG......................................................................................................................................................................................2311.001010000
.................................................................................CGACGATGGTGGACTTCAGTTCGT..........................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................ATTGATGGAAAGGAG------------------TCA---------------------AGGC---.................................................................................................................2211.001001000
.........................................................................................GTGGACTTCAGTTCGTGGTTGACGAAAA..............................................................................................................................................................................................................2811.001100000
.........................................GTGGACTGGGCAAGGCACGCTGC...................................................................................................................................................................................................................................................................23201.00201540001
...........................................................................................................TTGACGAAACTAGCCTACGTGGTCTGCG............................................................................................................................................................................................2811.001100000
.........................................GTGGACTGGGCAAGGCACGCTG....................................................................................................................................................................................................................................................................22200.70141220000
.............................ATAAGCAAACGAGTGGACTGG.................................................................................................................................................................................................................................................................................21200.70141310000
....................................AACGAGTGGACTGGGCAAGGCA.........................................................................................................................................................................................................................................................................22200.55111010000
..............................TAAGCAAACGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................22200.5010351010
...............................AAGCAAACGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................21200.408501002
.............................ATAAGCAAACGAGTGGACTGGGCAAG............................................................................................................................................................................................................................................................................26200.408800000
.............................ATAAGCAAACGAGTGGACTGGGCA..............................................................................................................................................................................................................................................................................24200.408710000
....................................AACGAGTGGACTGGGCAAGGC..........................................................................................................................................................................................................................................................................21200.408710000
.........................................GTGGACTGGGCAAGGCACGCTGCA..................................................................................................................................................................................................................................................................24200.255500000
..................................CAAACGAGTGGACTGGGCAAGGC..........................................................................................................................................................................................................................................................................23200.255100022
....................................AACGAGTGGACTGGGCAAGGCAC........................................................................................................................................................................................................................................................................23200.255500000
...............................................................CAACTATTCAGCCCTATCCGACGAT...........................................................................................................................................................................................................................................25200.255410000
.............................ATAAGCAAACGAGTGGACTGGGCAA.............................................................................................................................................................................................................................................................................25200.204400000
.........................................GTGGACTGGGCAAGGCACGCTGCAAC................................................................................................................................................................................................................................................................26200.204400000
............................................GACTGGGCAAGGCACGCTGCA..................................................................................................................................................................................................................................................................21200.204000013
....................................AACGAGTGGACTGGGCAAGGCACGC......................................................................................................................................................................................................................................................................25200.204400000
............................AATAAGCAAACGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................24200.204031000
..........................................TGGACTGGGCAAGGCACGCTGCAAC................................................................................................................................................................................................................................................................25200.204210001
..............................TAAGCAAACGAGTGGACTGGGCA..............................................................................................................................................................................................................................................................................23200.204400000
..........................................TGGACTGGGCAAGGCACGCTG....................................................................................................................................................................................................................................................................21200.204400000
.........................................................................................GTGGACTTCAGTTCGTGGTTGA....................................................................................................................................................................................................................22200.204400000
..........................CCAATAAGCAAACGAGTGGACTG..................................................................................................................................................................................................................................................................................23200.153210000
...............................AAGCAAACGAGTGGACTGGGCA..............................................................................................................................................................................................................................................................................22200.153300000
.........................................GTGGACTGGGCAAGGCACGCTT....................................................................................................................................................................................................................................................................22200.153300000
...............................................................CAACTATTCAGCCCTATCCGACGA............................................................................................................................................................................................................................................24200.153300000
...............................AAGCAAACGAGTGGACTGGGCAA.............................................................................................................................................................................................................................................................................23200.153300000
..................................CAAACGAGTGGACTGGGCAAGG...........................................................................................................................................................................................................................................................................22200.153210000
.....................................ACGAGTGGACTGGGCAAGGCA.........................................................................................................................................................................................................................................................................21200.153200100
....................................AACGAGTGGACTGGGCAAG............................................................................................................................................................................................................................................................................19200.153300000
....................................AACGAGTGGACTGGGCAAGGCACG.......................................................................................................................................................................................................................................................................24200.153300000
.........................................GTGGACTGGGCAAGGCACGCT.....................................................................................................................................................................................................................................................................21200.153300000
.......................................................................................................................................TGGTGGCGGACATTGATGGAAAGG....................................................................................................................................................................24180.112200000
...........................................................................................................................ACGTGGTCTGCGTGGTGGCGG...................................................................................................................................................................................21180.112000002
................................AGCAAACGAGTGGACTGGGCA..............................................................................................................................................................................................................................................................................21200.102200000
.........................................................................................GTGGACTTCAGTTCGTGG........................................................................................................................................................................................................................18200.102200000
..........................................TGGACTGGGCAAGGCACGCTGCAA.................................................................................................................................................................................................................................................................24200.102011000
..........................CCAATAAGCAAACGAGTGGACT...................................................................................................................................................................................................................................................................................22200.102020000
.................................................................................................................................TCTGCGTGGTGGCGGACATTGATGG.........................................................................................................................................................................25200.102200000
..........................................TGGACTGGGCAAGGCACGC......................................................................................................................................................................................................................................................................19200.102000002
.............................................................................................................................GTGGTCTGCGTGGTGGCGGAC.................................................................................................................................................................................21200.102000002
..............................TAAGCAAACGAGTGGACTGGG................................................................................................................................................................................................................................................................................21200.102100010
............................AATAAGCAAACGAGTGGACTG..................................................................................................................................................................................................................................................................................21200.102200000
.....................................................................................................................................................................................A---------------------AGGC---GT-------------------------------------CGATTGCTTCATGCCAGC........................................................25200.102200000
....................................AACGAGTGGACTGGGCAAGG...........................................................................................................................................................................................................................................................................20200.102200000
.........................................GTGGACTGGGCAAGGCACG.......................................................................................................................................................................................................................................................................19200.102200000
.GATGGAAGAACTTGTGGCCAAGCTC.........................................................................................................................................................................................................................................................................................................25150.071100000
.......................................................................................................................................TGGTGGCGGACATTGATGGAAAGGT...................................................................................................................................................................25180.061100000
...........................................................................................................................ACGTGGTCTGCGTGGTGG......................................................................................................................................................................................18180.061000010
.......................................................................................................................................TGGTGGCGGACATTGATGGAAAG.....................................................................................................................................................................23180.061100000
.............................................................................................................................................CGGACATTGATGGAAAGGA...................................................................................................................................................................19190.051100000
...........................................................................................................................................GGCGGACATTGATGGAAAGGAG------------------................................................................................................................................................22190.051100000
..........................................................................................................................................TGGCGGACATTGATGGAAAG.....................................................................................................................................................................20190.051000010
...........................................................................................................................................GGCGGACATTGATGGAAAGG....................................................................................................................................................................20190.051100000
........................TCCCAATAAGCAAACGAGTGGACTGG.................................................................................................................................................................................................................................................................................26200.051010000
..............................TAAGCAAACGAGTGGACTGGGCAAG............................................................................................................................................................................................................................................................................25200.051100000
.........................CCCAATAAGCAAACGAGTGGACTGGG................................................................................................................................................................................................................................................................................26200.051100000
...........................CAATAAGCAAACGAGTGGACTGG.................................................................................................................................................................................................................................................................................23200.051100000
.............................ATAAGCAAACGAGTGGACTGGGA...............................................................................................................................................................................................................................................................................23200.051100000
.............................ATAAGCAAACGAGTGGACTG..................................................................................................................................................................................................................................................................................20200.051010000
....................................AACGAGTGGACTGGGCAAGGCACGCTG....................................................................................................................................................................................................................................................................27200.051100000
.............................ATAAGCAAACGAGTGGACT...................................................................................................................................................................................................................................................................................19200.051010000
........................................AGTGGACTGGGCAAGGCA.........................................................................................................................................................................................................................................................................18200.051100000
............TTGTGGCCAAGCTCCCAATAAGCAAAC............................................................................................................................................................................................................................................................................................27200.051010000
..................................CAAACGAGTGGACTGGGCAAGGCACGCT.....................................................................................................................................................................................................................................................................28200.051100000
............................AATAAGCAAACGAGTGGACTGGGCAAG............................................................................................................................................................................................................................................................................27200.051100000
............TTGTGGCCAAGCTCCCAATAAGCAAACGA..........................................................................................................................................................................................................................................................................................29200.051100000
........................................AGTGGACTGGGCAAGGCACGCTGCAA.................................................................................................................................................................................................................................................................26200.051100000
.......................................GAGTGGACTGGGCAAGGCACG.......................................................................................................................................................................................................................................................................21200.051100000
.........................................................................................GTGGACTTCAGTTCGTGGTTATG...................................................................................................................................................................................................................23200.051100000
...........................CAATAAGCAAACGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................25200.051001000
...............................................................CAACTATTCAGCCCTATCCGACG.............................................................................................................................................................................................................................................23200.051100000
..............................TAAGCAAACGAGTGGACTGGGCAA.............................................................................................................................................................................................................................................................................24200.051100000
......................GCTCCCAATAAGCAAACGAGTGGACTG..................................................................................................................................................................................................................................................................................27200.051100000
..........................................TGGACTGGGCAAGGCACGCT.....................................................................................................................................................................................................................................................................20200.051100000
.........................CCCAATAAGCAAACGAGTGGACT...................................................................................................................................................................................................................................................................................23200.051001000
..............................................................GCAACTATTCAGCCCTATCC.................................................................................................................................................................................................................................................20200.051100000
.....................................ACGAGTGGACTGGGCAAGG...........................................................................................................................................................................................................................................................................19200.051100000
.........................................................................................GTGGACTTCAGTTCGTGGTTG.....................................................................................................................................................................................................................21200.051100000
...................................AAACGAGTGGACTGGGCAAGG...........................................................................................................................................................................................................................................................................21200.051000010
...........................CAATAAGCAAACGAGTGGACTGGG................................................................................................................................................................................................................................................................................24200.051010000
.............................................................................................................................GTGGTCTGCGTGGTGGCG....................................................................................................................................................................................18200.051000001
.................................GCAAACGAGTGGACTGGGCA..............................................................................................................................................................................................................................................................................20200.051100000
........................................AGTGGACTGGGCAAGGCACGC......................................................................................................................................................................................................................................................................21200.051000010
.............................................................TGCAACTATTCAGCCCTATCCGACGAT...........................................................................................................................................................................................................................................27200.051010000
........................TCCCAATAAGCAAACGAGTGGACT...................................................................................................................................................................................................................................................................................24200.051010000
.................................GCAAACGAGTGGACTGGGCAAGG...........................................................................................................................................................................................................................................................................23200.051000010
................GGCCAAGCTCCCAATAAGCA...............................................................................................................................................................................................................................................................................................20200.051100000
............................AATAAGCAAACGAGTGGACTGGGCAAGG...........................................................................................................................................................................................................................................................................28200.051100000
..................................CAAACGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................18200.051010000
.............................ATAAGCAAACGAGTGGACTGGGCAAGG...........................................................................................................................................................................................................................................................................27200.051100000
...............................AAGCAAACGAGTGGACTGGGCAAGG...........................................................................................................................................................................................................................................................................25200.051100000
.............................ATAAGCAAACGAGTGGACTGGGTT..............................................................................................................................................................................................................................................................................24200.051000010
...........................CAATAAGCAAACGAGTGGACT...................................................................................................................................................................................................................................................................................21200.051100000
...................................AAACGAGTGGACTGGGCAAGGCA.........................................................................................................................................................................................................................................................................23200.051001000
.......................................................................................................................................TGGTGGCGGACATTGATGGA........................................................................................................................................................................20200.051000010
..........................CCAATAAGCAAACGAGTGGACC...................................................................................................................................................................................................................................................................................22200.051010000
......................................CGAGTGGACTGGGCAAGGCACT.......................................................................................................................................................................................................................................................................22200.051000001
...............TGGCCAAGCTCCCAATAAGCAAACGAG.........................................................................................................................................................................................................................................................................................27200.051100000
................................AGCAAACGAGTGGACTGGG................................................................................................................................................................................................................................................................................19200.051100000
.......................................GAGTGGACTGGGCAAGGC..........................................................................................................................................................................................................................................................................18200.051000001
..............................................................................................................................TGGTCTGCGTGGTGGCGGACATTG.............................................................................................................................................................................24200.051100000
....................................AACGAGTGGACTGGGCAAGGCT.........................................................................................................................................................................................................................................................................22200.051010000
......................................CGAGTGGACTGGGCAAGGCACG.......................................................................................................................................................................................................................................................................22200.051000001
...............................................TGGGCAAGGCACGCTGCAACTATTCAG.........................................................................................................................................................................................................................................................27200.051100000
...............................AAGCAAACGAGTGGACTGGGCAAGGC..........................................................................................................................................................................................................................................................................26200.051100000
.........................................GTGGACTGGGCAAGGCACGC......................................................................................................................................................................................................................................................................20200.051010000
.........................................................................................GTGGACTTCAGTTCGTGGTT......................................................................................................................................................................................................................20200.051100000
.....................................ACGAGTGGACTGGGCAAGGCTA........................................................................................................................................................................................................................................................................22200.051100000
.............................ATAAGCAAACGAGTGGAC....................................................................................................................................................................................................................................................................................18200.051010000
...........................CAATAAGCAAACGAGTGGACTG..................................................................................................................................................................................................................................................................................22200.051000010
....................................................AAGGCACGCTGCAACTATTCAG.........................................................................................................................................................................................................................................................22200.051000001
..........................................................CGCTGCAACTATTCAGCCCTA....................................................................................................................................................................................................................................................21200.051100000
...........................................GGACTGGGCAAGGCACGCTGT...................................................................................................................................................................................................................................................................21200.051000010
..........................................TGGACTGGGCAAGGCACGCTGC...................................................................................................................................................................................................................................................................22200.051100000
...............................AAGCAAACGAGTGGACTGGG................................................................................................................................................................................................................................................................................20200.051100000
...............................................................CAACTATTCAGCCCTATCCGAC..............................................................................................................................................................................................................................................22200.051100000
...............................AAGCAAACGAGTGGACTGGGCAAG............................................................................................................................................................................................................................................................................24200.051100000
..............................TAAGCAAACGAGTGGACTGG.................................................................................................................................................................................................................................................................................20200.051100000
.......................................................................................................................................TGGTGGCGGACATTGATGGAT.......................................................................................................................................................................21200.051000010
...................................................CAAGGCACGCTGCAACTATTCAGCCC......................................................................................................................................................................................................................................................26200.051010000
...........................CAATAAGCAAACGAGTGGACTGGGCA..............................................................................................................................................................................................................................................................................26200.051100000
..............................TAAGCAAACGAGTGGACTGGGCAAGGCA.........................................................................................................................................................................................................................................................................28200.051100000
droBip1
TAATGGAGGAGCTGATAGCCAAGTTGCCGCTAAGCAAGAGGTTGGACTGGGCAAGGCACGCGGCCACGATGCAGCCGTATCCGACGGTGGCGCACCTGAGCGAGTGGCTCCATGAATTCGCCAAACTGGTGA-----GTCACGGACGTCGGAGCCAGGGAACAA---------------CCG---------------------AAGC---GA-------------------------------------AGGATTCTGCACGCGAATAGTGTTCGCGAGGA---GGAGCGATATGTCGACCGCCCCAG---ATGC--------SizeHit CountTotal NormTotal
No Reads
droKik1
TGATGGAGGAGCTGGTCGCCATGTTGCCTGTGAGCAAAAGGCTGGAATGGGCGAAGCACGCGGCTACGATACAGCCATACACGACAGTGGTGCACCTGAGCGAGTGGCTTCATGAATTCGCTAAATTGGTGTGCACTGTCACGGACGTCGGAATCAAGGAGCAC---------------CCG---------------------AAGC---GA-------------------------------------AAGGTT-TGCACGCGAATAGTGTTCGCAAGGA---GGAGCGGTATGCAGACCG---CCCAAA---A--------SizeHit CountTotal NormTotal
No Reads
droFic1
TAATGGAGGAGCTTGTGGCGAAGCTTCCTACGAGTAGGCGAGTAGATTGGGCCAGGCACGCTGCATCGATCAGGCCCTTTCCCACTGTAGCGCACTTCAGCGCGTGGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGATAGAGAGCTTAGTAGGTAAGATGCCACTCAGTAAGCGAGTTCAATGGATTGAATATTCATCGCCAATTCAGCCATATCCTAATTTAGACCACTTCAGCAATTGGCTGAGCACTATGGCAAGAAGCATT-G--------CAGG-GCAACCATTGCAG--CCAGTTAATATTAAACAGACGAAGAATGA---CAAAGGCTTAC---AAAAATCTATTTTACATTCTTCGAACAATGCACCTAAAGGAA-------------------------------------------------ACAA---AAAGGA---A--------SizeHit CountTotal NormTotal
No Reads
droRho1
TGATAGAGAGCCTGGTAGGTAAGATGCCACTCAGCAAGCGAATTCAATGAATTGAGCATTCATCGCAAATTCAGCCTTTTCCAAATTTACATCACTTTAGCAACTGGTTAAGCACTAAGGCATGAAGCATT-G--------TAAGAACAACCATTTCAACCCCAGTAAATTCAAAACAGTCAAAGAATGAACCCAAGTGTCCAC---TTGAATCAGTATTACATTCTTCTAGGAAAGAAACTAAAGGAA-------------------------------------------------ACAA---GATAAA---G--------SizeHit CountTotal NormTotal
No Reads
droBia1
TAATGGAGGAGCTGATAGCCAAGTTGCCGCTAAGCAAGAGGTTGGACTGGGCAAGGCACGCGGCCACGATACAGCAGTATCCGACGGTGGCGCACCTGAGCGAGTGGCTCCATGAATTCGCCA------------CTGTCACGGAAGCCGGAGCCAGGGAACAA---------------CCG---------------------AAGC---GA-------------------------------------AGGATTCTGCACGCGAATAGTGTTCGCGAGGA---GGAGCGATATGTCGACCGCCCCAG---ATGC--------SizeHit CountTotal NormTotal
No Reads
droTak1
TGATAGAGAGCCTGGTAGGTAAAATGCCACTCAGTAAGCGGGTTCAATGGATCGAGCATTCATCGCAAATTCAGCTTTATCCAAATTTAGATCACTTCAGCAATTGGCTGAGCACTATGGCAAGAAGCATT-G--------CAAGGGCAACCGTATCAGCACCGGTAAATACCAAACAGACGAAGAATGAGCAAAAGGGTCCGT---TGAAATCAATTTTACATTCTTCCAAGAATGAAACTAAAGTGA-------------------------------------------------ACAA---GATGGA---G--------SizeHit CountTotal NormTotal
No Reads
droEug1
TGATGGAAGAGCTGATCGCCAAGCTACCACTGAGCAAAAGGTTGGATTGGGCCAGGCACGCCGCCGTAATAGGGTGCTACCCAACTGTCGCGCACTTGAGCGAATGGCTAAACGAACTCGCTAAATTAGTGTGCACTATTACGAGCAGCGACAGCAAGGAT------------------CCT---------------------AAGC---GT-------------------------------------AGGGTATTGCACGCCAGCACCAGTCAGAAGGATCAGGATCTATTTGAAGATCATCCCAG---GAGTTGCCCAATSizeHit CountTotal NormTotal
No Reads
dm3
TCATGGAGGAGCTTGTGGCCAAGCTGCCAACGAGCAAGCGAGTGGACTGGGCCAGGCATGCTGCAACGATTGCGCCCTTTCCCACTGTAGTCCACTTCAGCGCGTGGCTACAGGAGTACGCAAACGTGGTGTGCACGGTTTTGGACGTCGAGGGAAAGGAG------------------CCG---------------------AGGC---GT-------------------------------------CGACTTCTACATGCAAGCGTCGACCATAATGAATGCGATCAACAGGATGATCGGCATGG---AGGT--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................TACATGCAAGCGTCGACCATAATG...........................................2420170.0034000000000000010000000000000000008000012000031600003401500000000000000000000000000000000000200000000010000000000000000010010000000000000000000000002350280020038010160000000000000000000008011000000000006802419011380306490000000621000000001925021700077000000000085000000010000000000000000000000000200000100000000076112000101298019714009002622403680000000000050165601180000000
............................................................................................................TACAGGAGTACGCAAACGTGGTGT...............................................................................................................................................................................................2420134.752695000000000001000000000111000000410200000110944080340080071000040000000000000000000000000091400000001319800230000002007610700000000000100000000000062324500391914251100100000000000000000002107000500000014027002760112593000000110021000009711413230200000000000000306100002002000000000000000000000000001010000000005541110170119020700630001341670000000000011027152261393225000000
............................................................................................................TACAGGAGTACGCAAACGTGGTGTGC.............................................................................................................................................................................................262084.351687000000000001000000000250000006000000190501022080191400041000200000000000000000000000011000000000010001000010000000000000000000000000000000000010213271557419030000000000000000000000006000000000074582644502099000000214021019800059127130001000000000000000000000300000000000000000000000001000000000000000110010204947141400600228289000000000001003963203225135000000
................................................................................................................................................................................................................................................................TACATGCAAGCGTCGACCATAATGAA.........................................262083.9516790000000010020000000000940000016170000030000050100050000000010000000000000000000000000053600000001010004000002102001001000000000001000010000300700820528000800000000000000000000021700000000000001011926003050390000001440000100040010000009591100000000000000000000100000000000000000000000000000000000000000101100135420600008910100000000000000014189000000
................................................................................................................................................................................................................................................................TACATGCAAGCGTCGACCATAATGA..........................................252035.3570700000000000000000000000000000400000000004010100100005000000000000000000000000000001002000000000001000200000000000000000000000001000000000002160000865001000000000000000000000000400012000000080300001435151000001270400000004041017903606800000000000010000010010000000000000000000000000000000000000018000000440390041005452000000000000004150023000000
TCATGGAGGAGCTTGTGGCCAAGCT..........................................................................................................................................................................................................................................................................................................252034.45689000000000000000000000000000003000000100000100000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000006205213102090000000000000000000000103000000000000040000110300000008021158000000014507826140010000000000000000010000000000000000000000000000000000000000030110000010111002241500000000000601324838380000000
............................................................................................................TACAGGAGTACGCAAACGTGGTGTG..............................................................................................................................................................................................252034.0068000000000000100000000000000000400000060603100831605000700000100000000000000000000000300010010000702200030000000000200000000000000000000000000002033046000101300000000000000000000404000000000010151900002144600000015807181000000399002010000000000021000000000000000000000000000000000000000000000000070310714351542000000038470000000000020123449052000000
...........................CAACGAGCAAGCGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................251733.8857600000000000000000000000100000000000040314200104010000000000000000000000000000000000000000000002000000000000000010000000000000000000000040100001042113303112100000000000000000002000000000000815640004126154010601650821110006013631701640000000001000000001001000001000000000000000000000000000000004010002710474163002430220000000000030238344114000000
................................................................................................TCAGCGCGTGGCTACAGGAGTACGCA.........................................................................................................................................................................................................262029.955990000000000000000000000020000000000000000000010200000200000000000000000000000000000000000000000000100000000000000000000000000000000000000000040610021003062900000000000000000000000000000000002691900003814400000001170221100009003600007000000000000003000001001000000000000000000000000000000000000004000004772611300001290000000000000152747590000000
............................AACGAGCAAGCGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................241727.4146600000000000000000000000000000100000020102010201001000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000011001100102200000000000000000000001100040000002317020103053732109000302510000140930050023000000000000000000000300000000000000000000000000000000000000100500034827601150024172200000000000801711989000000
...............................................................................................................................................................................................................................................................................................TCAACAGGATGATCGGCATGG---AGGT--------252026.85537000000001000000000000024000000000000000000002000012000000100000000000000000000000006101700000000005000000000030100001000000000000000100000000012000001001900300000000000000000000000200000000001397902180052000000002400028000092000002000000000000010010000000000000000000000000000000000000000000000000000000700002006100000000000002062022000000011
.........................GCCAACGAGCAAGCGAGTGGACTGGGC...............................................................................................................................................................................................................................................................................271726.47450000000000000000000000000000001000000006022101050000010000000000000000000000000000000000000000000000000000000000000000000000000000000100400011160053111002000000000000000000000001000000000010125002101339151082401093214500015039506078150000000000000000001001000000000000000000000000000000000000004000002662511110028217000000000000059352220002000
............................................................................................................TACAGGAGTACGCAAACGTGGT.................................................................................................................................................................................................222026.00520000000000000000000000030000001000000102021000020020020000681000000000000000000000030010000001000100000000000001000000000000000000000000000002771000132602320000000000000000000000000020000000133701000123000000010301000001405512000001000000000032000000000000000000000000000000000002000000000000013030005281038000000131900000000000010526464640000000
................................................................................................................................................................................................................................................................TACATGCAAGCGTCGACCATAAT............................................232024.704940000000000000000000000490000000000000000000023001000210000000000000000000000000000003100000000000000002000000000000000000000000100000000000000870306500000000000000000000000000010000000000620000204405100001000000000002121170503734601000000000000000000000000000000000000000000000000000000000000000000217240001001027000000000000004036021000000
............................................................................................................TACAGGAGTACGCAAACGTGGTG................................................................................................................................................................................................232023.70474000000000000000000000052000000200000805073100610065001000000000000000000000000000000003200000000000000000000000021100000000000001000000000000015172404596171814610000000000000000000200000000000040015080015000000030000000000069500000000000000003300000000000000000000000000000000000000000000000000000001031000000058190000000000000213384018100000
.CATGGAGGAGCTTGTGGCCAAGCT..........................................................................................................................................................................................................................................................................................................242022.00440000000000000000000000001000003000000000000000000000000000000000000000000000000000000000000000010100000000000001100000000000000000000000000007110017630101010000000003000000000100000100000030020000080000020900041100000022270664400422000000000000000000000000000000000000000000000000000000000001110001010000300002400000000000030300324226000000
........................................................................................................TGGCTACAGGAGTACGCAAACGTGG..................................................................................................................................................................................................252019.45389000000000001000000000000000000000000002020004030100010000120000000000000000000000000001000000140030000000000100100010000000100010000000000001109000112010030000000000000000001403000600000035359843010008000000321021000035040000000200000000000000000030010000000000000000000000000000000000000070200023511810300030174000000000001038900000000
..........................................................................................................................................TTTTGGACGTCGAGGGAAAGGAG------------------C...............................................................................................................................................242017.5035000000000000100000000010000000000000010000000011000000100000000000000000000000000000000000000000000000000000000000000000000000000000100120000003000000204000000000000000000000000000040000003182141010002003010500400002712214130183203003000000000000000000000000000000000000000000000000000000000000000000021000010004462000000000001001055000000
...................................................................................................................................................................................................................................................................................TAATGAATGCGATCAACAGGATGA........................242017.1034200000000000000000000000000000000000000100000270000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000002000010003000000000000000000001000000300000000000002000089037000007000005001540028000500000000000000000000000000000000000000000000000000000000000000400031104100000001000000000000010005000000
............................................................................................................TACAGGAGTACGCAAACGTGGTGTGCA............................................................................................................................................................................................272015.803160000000000000000000001000000000000000010000000003100000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100040000000000000000000000000000000000006400102560000000203420000130610000000000000000000000000010000000000000000000000000000000000000000050000231433400000063111000000000000521335241000000
.............TGTGGCCAAGCTGCCAACGAGCAAGC............................................................................................................................................................................................................................................................................................262015.2030400000000000000000000000200000100000000600240001000300000000000000000000000000000000000000000000004000000000000050000000000000000000000100000501201042600180500000000000000000000010000000000000600030120000000903010600017161600002010000000002003000008003000000000000000000000000001000000000000201004062100000057000000000000010352505000000
...........................................................................................................................................TTTGGACGTCGAGGGAAAGGAG------------------C...............................................................................................................................................232015.10302000000000000000000000001000000000000000000000000010010000000000000000000000000000010000000000000000000000000000100000000000000000000000000000310021000200310000000000000000000100000000000060162000001613012038120100203000000150008013000000000000000000002000000000000000000000000000000000000000000030025022484028002500000000000000001040000000
......................................................................TGCGCCCTTTCCCACTGTAGTCCACT...................................................................................................................................................................................................................................262015.053010000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000100000000000000000000010001000000301000040204802413124000000900004000404230920000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000
............................................................................................................TACAGGAGTACGCAAACGTGG..................................................................................................................................................................................................212014.65293000000000000000000000001300000000005010001000200300020000111000000000000000000000000001000000000000000000000000000000000000000000000000020000308003130030000000000000000000000000000500000018100901029000000000100000072224000000000000000000000000000000000000000000000000000002000500000000013000014050002000143346000000000000030211215000000
.............TGTGGCCAAGCTGCCAACGAGCAAG.............................................................................................................................................................................................................................................................................................252014.652930000000000000000000002210000010000001040000000000001000000000000000000000000000000000020000000000100000000000011000000000000000000000000010073600260492002200000000000000000000010000000000505010001330370000000430000110004605000000000000000000000000002002000000000000000000000000000010000000000000000905001200043000000000000000942000000
..........................................................................................................................................................................................................................................................................................TGCGATCAACAGGATGATCGGCATGG---............262014.30286000000000000000000000002000000000000002000000000001080000000000000000000000000000000000000000000000000000000000000000000000000010080000271303780060021146000000000000000000000001010001220000001720600000020000000000194000001800000070000000000500000000200000000000000000000000000000000000000000800000432014000000003000000000000000000000000
...........................................................................................................CTACAGGAGTACGCAAACGTGGTG................................................................................................................................................................................................242014.05281000000000000000000000010000000000000000068000000000000000000000000000000000000000000001000000020010000000000000000000000000000000000000000000038001002870200000000000000000000000000000000000350330000223600000030000000003201010000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000001022250000000
...........................................................................................................CTACAGGAGTACGCAAACGTGGTGT...............................................................................................................................................................................................252013.752750000000000000000000000000000000000000000650010203000000000000000000000000000000000002000000000000200000000000000000000000000000000000000000001000001729000100000000000000000001100000000000001070030013000000010001000002203200001000000000000000000001000000000000000000000000000000000000000001100007121100020073400000000000001017195617000000
..........................................................................................................................................................................................................................................................................................TGCGATCAACAGGATGATCGGCATGG---AG..........282011.9023800000000000000000000000000000000000013000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000033000200200341000000000000000000000000000000000000000150000000000000002000000013101509000000000000000000000000000000000000000000000001000000000000006000000140000100052530000000000000000007000000
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......AGGAGCTTGTGGCCAAGCTGC........................................................................................................................................................................................................................................................................................................21200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000100000000000000000000000370310000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TGGTGTGCACGGTTTTGGACGT...............................................................................................................................................................................22200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000020000000000000000000000000000000000000000000000060300040000000000000000001000000000000000000000000000000000
.............................................................................................................ACAGGAGTACGCAAACGTGGTGTGCA............................................................................................................................................................................................26200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000300010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000001000000000002000000000000000000000000000000000000000000000000000010000000000000000000000101000000002000000000002000010000000
.......................................GAGTGGACTGGGCCAGGCATGCT.....................................................................................................................................................................................................................................................................23200.90180000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000410000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000200000000000000000000000000
.............................................................................................................................................................................................................................................................TTCTACATGCAAGCGTCGACCATAATG...........................................27200.901800000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................CGTCGAGGGAAAGGAG------------------CCG---------------------AGGC---.................................................................................................................23200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000002000000000000000000070000000100000010000000000000000000000000000000000000000000000000100000000000000001000000000120000000000000000000000000
...............................................................CAACGATTGCGCCCTTTCCCACTG............................................................................................................................................................................................................................................24200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102010003100000000000000000000000000000000000000000000000000000000000000000000103000000121000000000000000000000000
...TGGAGGAGCTTGTGGCCAAGCTGC........................................................................................................................................................................................................................................................................................................24200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000050000000000302310000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
droSim2
TCATGGAGGAGCTTGCGGCCAAGCTTCCAACGAGCAAGCTAGTGGACTGGGCCAGGCATGCTGCAATGATTTTGCCCTTTCCCACTGTTGTCCACTTCAGCTTGTGGCTACAGGTCGCAGCCAGAGACGAT-G--------TGCGGGCACAAACGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................TGGACTGGGCCAGGCATGCTGCAAT................................................................................................................................................................................................................................................................25219.50390000001511720031000
..........................................TGGACTGGGCCAGGCATGCTGCAA.................................................................................................................................................................................................................................................................24618.501110001004241006633000
.......................................TAGTGGACTGGGCCAGGCATGCTGC...................................................................................................................................................................................................................................................................25210.0020000000125210000000
.........................................GTGGACTGGGCCAGGCATGCTGCAA.................................................................................................................................................................................................................................................................2567.67460000000000003511000
..........................................TGGACTGGGCCAGGCATGCTGCAAA................................................................................................................................................................................................................................................................2566.00360000000000002511000
..........................................TGGACTGGGCCAGGCATGCTGCAATGA..............................................................................................................................................................................................................................................................2725.001000000070210000000
.........................................GTGGACTGGGCCAGGCATGCTGCAAA................................................................................................................................................................................................................................................................2664.6728000000000000208000
.........................................GTGGACTGGGCCAGGCATGCTGCAAT................................................................................................................................................................................................................................................................2623.50700000020200030000
.........................TCCAACGAGCAAGCTAGTGGACTGGGC...............................................................................................................................................................................................................................................................................2722.50500000012100010000
..........................................TGGACTGGGCCAGGCATGCTGCA..................................................................................................................................................................................................................................................................2362.501500000030110064000
...........................CAACGAGCAAGCTAGTGGACTGGGC...............................................................................................................................................................................................................................................................................2522.50500100030001000000
............................................................................................................TACAGGTCGCAGCCAGAGACGAT-G--------......................................................................................................................................................................................2422.50500000000005000000
.......................................TAGTGGACTGGGCCAGGCATGCTG....................................................................................................................................................................................................................................................................2422.00400000030100000000
.......................................TAGTGGACTGGGCCAGGCATGCTGCAAT................................................................................................................................................................................................................................................................2822.00400000011200000000
..........................................TGGACTGGGCCAGGCATGCTGCAATGAT.............................................................................................................................................................................................................................................................2822.00400000031000000000
..........................................TGGACTGGGCCAGGCATGCTGCAATG...............................................................................................................................................................................................................................................................2621.50300000021000000000
.............TGCGGCCAAGCTTCCAACGAGCAAGC............................................................................................................................................................................................................................................................................................2621.50300000000003000000
.......................................TAGTGGACTGGGCCAGGCATGCTGCAA.................................................................................................................................................................................................................................................................2721.50300000000100020000
..........................................TGGACTGGGCCAGGCATGCTGCAAAA...............................................................................................................................................................................................................................................................2661.33800000000100070000
..........................................TGGACTGGGCCAGGCATGCTGCAT.................................................................................................................................................................................................................................................................2461.00600000000000042000
..........................................................................................................................AGAGACGAT-G--------TGCGGGCACAAACGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------2521.00200000010100000000
.........................................GTGGACTGGGCCAGGCATGCTGCAATGAT.............................................................................................................................................................................................................................................................2921.00200000020000000000
..........................................TGGACTGGGCCAGGCATGCTG....................................................................................................................................................................................................................................................................2161.00600000000000033000
.......................................TAGTGGACTGGGCCAGGCAA........................................................................................................................................................................................................................................................................2021.00200000020000000000
.......................................TAGTGGACTGGGCCAGGCATGC......................................................................................................................................................................................................................................................................2221.00200000010100000000
............................................................................................................TACAGGTCGCAGCCAGAGACGAT-...............................................................................................................................................................................................2321.00200000000001100000
............................AACGAGCAAGCTAGTGGACTGGGC...............................................................................................................................................................................................................................................................................2421.00200000010001000000
........................................AGTGGACTGGGCCAGGCATGCTGCAA.................................................................................................................................................................................................................................................................2660.83500000000001040000
..........................................TGGACTGGGCCAGGCATGCTGC...................................................................................................................................................................................................................................................................2260.83500000010000031000
...................................................................................................................CGCAGCCAGAGACGAT-G--------TGCGGGC...............................................................................................................................................................................2420.50100000000001000000
...............................................................................................................AGGTCGCAGCCAGAGACGAT-G--------......................................................................................................................................................................................2120.50100010000000000000
..........................................................................................................................AGAGACGAT-G--------TGCGGGCACAAACGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------2520.50100000000001000000
..........................CCAACGAGCAAGCTAGTGGACTGGGC...............................................................................................................................................................................................................................................................................2620.50100000010000000000
....................................................................................................................GCAGCCAGAGACGAT-G--------......................................................................................................................................................................................1620.50100000000001000000
.........................TCCAACGAGCAAGCTAGTGGACTGGGCC..............................................................................................................................................................................................................................................................................2820.50100000000000010000
...................CAAGCTTCCAACGAGCAAGCTAGTGGAC....................................................................................................................................................................................................................................................................................2820.50100000010000000000
.......................................TAGTGGACTGGGCCAGGCA.........................................................................................................................................................................................................................................................................1920.50100000010000000000
...........................CAACGAGCAAGCTAGTGGACTGA.................................................................................................................................................................................................................................................................................2320.50100000000001000000
.............TGCGGCCAAGCTTCCAACGAGCAA..............................................................................................................................................................................................................................................................................................2420.50100000000001000000
........................................AGTGGACTGGGCCAGGCATGCTGCA..................................................................................................................................................................................................................................................................2560.50311000000000010000
......................................................................................................TGTGGCTACAGGTCGCAGCCAGAGAG...................................................................................................................................................................................................2620.50100000000001000000
......................................CTAGTGGACTGGGCCAGGCATGCTGCAAA................................................................................................................................................................................................................................................................2920.50100000001000000000
.........................................GTGGACTGGGCCAGGCATGCTGCA..................................................................................................................................................................................................................................................................2460.50300000000000012000
..................................CAAGCTAGTGGACTGGGCCAGGCA.........................................................................................................................................................................................................................................................................2420.50100000000000010000
..........................................TGGACTGGGCCAGGCATGCTGCAATGATT............................................................................................................................................................................................................................................................2920.50100000001000000000
...................................AAGCTAGTGGACTGGGCCAGGCATGC......................................................................................................................................................................................................................................................................2620.50100000001000000000
...........................CAACGAGCAAGCTAGTGGACTGGG................................................................................................................................................................................................................................................................................2420.50100000000001000000
.........................................GTGGACTGGGCCAGGCATGCTGCAATG...............................................................................................................................................................................................................................................................2720.50100000010000000000
........................................................................................................TGGCTACAGGTCGCAGCCAGAGACGA.................................................................................................................................................................................................2620.50100000000001000000
......................................CTAGTGGACTGGGCCAGGCATGCTGC...................................................................................................................................................................................................................................................................2620.50100000001000000000
....................................................................................................................GCAGCCAGAGACGAT-G--------TGCGGGCACAAACGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------3120.50100000010000000000
.......................................TAGTGGACTGGGCCAGGC..........................................................................................................................................................................................................................................................................1820.50100000000001000000
........................TTCCAACGAGCAAGCTAGTGGACTGGGC...............................................................................................................................................................................................................................................................................2820.50100000010000000000
....................................AGCTAGTGGACTGGGC...............................................................................................................................................................................................................................................................................1620.50100000000001000000
............................AACGAGCAAGCTAGTGGACTGGGCCA.............................................................................................................................................................................................................................................................................2620.50100000010000000000
..........................................TGGACTGGGCCAGGCATGCTGCAATGAA.............................................................................................................................................................................................................................................................2820.50100000010000000000
.......................................................................................................................GCCAGAGACGAT-G--------TGCGGGCACAAA..........................................................................................................................................................................2520.50100000001000000000
........................................................................................................TGGCTACAGGTCGCAGCCAGAG.....................................................................................................................................................................................................2220.50100000000001000000
.......................................TAGTGGACTGGGCCAGGCATGCTGCA..................................................................................................................................................................................................................................................................2620.50100000010000000000
.......................................TAGTGGACTGGGCCAGGCATGCTGCAAA................................................................................................................................................................................................................................................................2820.50100000010000000000
....................................AGCTAGTGGACTGGGCCAGGCAA........................................................................................................................................................................................................................................................................2320.50100000000000010000
.............................................................................................................ACAGGTCGCAGCCAGA......................................................................................................................................................................................................1620.50100000000100000000
..............................................CTGGGCCAGGCATGCTGCAATGATT............................................................................................................................................................................................................................................................2520.50100000010000000000
........................................AGTGGACTGGGCCAGGCATGCTGC...................................................................................................................................................................................................................................................................2460.50300000010000011000
.............................................................................................................ACAGGTCGCAGCCAGAGACGAT-G--------TGC...................................................................................................................................................................................2620.50100000000001000000
..............................................................................................................CAGGTCGCAGCCAGAGACGAT-G--------TG....................................................................................................................................................................................2420.50100000000001000000
.............TGCGGCCAAGCTTCCAACGAGCAAGCT...........................................................................................................................................................................................................................................................................................2720.50100010000000000000
.........................................GTGGACTGGGCCAGGCATGCTG....................................................................................................................................................................................................................................................................2260.50300000000001011000
..........................................TGGACTGGGCCAGGCATGCT.....................................................................................................................................................................................................................................................................2060.33200000000001001000
.........................................GTGGACTGGGCCAGGCATGCT.....................................................................................................................................................................................................................................................................2160.33200100001000000000
..........................................TGGACTGGGCCAGGCATGCTGTT..................................................................................................................................................................................................................................................................2360.33200000000000002000
........................................AGTGGACTGGGCCAGGCAT........................................................................................................................................................................................................................................................................1960.33200000000000002000
..........................................TGGACTGGGCCAGGC..........................................................................................................................................................................................................................................................................1580.25200000020000000000
........................................................................TGCCCTTTCCCACTGTTGTCCAC....................................................................................................................................................................................................................................2340.25100000010000000000
........................................AGTGGACTGGGCCAGGCATGCTG....................................................................................................................................................................................................................................................................2360.17100000000100000000
.........................................GTGGACTGGGCCAGGCATG.......................................................................................................................................................................................................................................................................1960.17100000000000010000
.........................................GTGGACTGGGCCAGGCATGCTGCAT.................................................................................................................................................................................................................................................................2560.17100000000000010000
..........................................TGGACTGGGCCAGGCATG.......................................................................................................................................................................................................................................................................1860.17100000000001000000
........................................AGTGGACTGGGCCAGGCATGCTGCAAA................................................................................................................................................................................................................................................................2760.17100000000000010000
.........................................GTGGACTGGGCCAGGCATGCTGC...................................................................................................................................................................................................................................................................2360.17100000000000010000
..........................................TGGACTGGGCCAGGCATGCTGCAG.................................................................................................................................................................................................................................................................2460.17100000000000001000
..........................................TGGACTGGGCCAGGCATGCTGCAAAT...............................................................................................................................................................................................................................................................2660.17100000000000010000
..........................................TGGACTGGGCCAGGCATGCTGCATA................................................................................................................................................................................................................................................................2560.17100000000000010000
...........................................GGACTGGGCCAGGCATGCTGCA..................................................................................................................................................................................................................................................................2260.17100000000000001000
.........................................GTGGACTGGGCCAGGCATGCAAA...................................................................................................................................................................................................................................................................2360.17100000000000001000
..........................................TGGACTGGGCCAGGCATGCTGCAAG................................................................................................................................................................................................................................................................2560.17100000000000010000
.............................................ACTGGGCCAGGCATG.......................................................................................................................................................................................................................................................................1560.17100000000001000000
.........................................GTGGACTGGGCCAGGCATGCTGCAAAA...............................................................................................................................................................................................................................................................2760.17100000000000001000
..............................................CTGGGCCAGGCATGCT.....................................................................................................................................................................................................................................................................1660.17100000000001000000
..........................................TGGACTGGGCCAGGCATGCAA....................................................................................................................................................................................................................................................................2160.17100000000000001000
..........................................TGGACTGGGCCAGGCAT........................................................................................................................................................................................................................................................................1760.17100000000001000000
.........................................GTGGACTGGGCCAGGC..........................................................................................................................................................................................................................................................................1670.14100000000001000000
..........................................TGGACTGGGCCAGGCATGCTGACT.................................................................................................................................................................................................................................................................2470.14100000000000010000
..........................................TGGACTGGGCCAGGCAA........................................................................................................................................................................................................................................................................1770.14100000000010000000
droSec2
TCATGGAGGAGCTTGCGGCCAAGCTTCCAACGAGCAAGCTAGTGGACTGGGCCAGGCATGCTGCAACGATTTTGCCCTTTCCCACTGTTGTCCACTTCAGCTTGTGGCATCAGGTCGCAGCCAGAGACGAT-C--------TGCGAGCACAAACGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................TCCAACGAGCAAGCTAGTGGACTGGGC...............................................................................................................................................................................................................................................................................2720.5010001
........................................................................TGCCCTTTCCCACTGTTGTCCACTTC.................................................................................................................................................................................................................................2670.2922000
....................................................CAGGCATGCTGCAACGATTTTGCCCT.....................................................................................................................................................................................................................................................2640.2511000
.............................................................TGCAACGATTTTGCCCTTTCCCACTGT...........................................................................................................................................................................................................................................2770.1411000
..........................................TGGACTGGGCCAGGCATGCTGCAACGA..............................................................................................................................................................................................................................................................27160.0611000
...............................................TGGGCCAGGCATGCTGCAACGA..............................................................................................................................................................................................................................................................22170.0611000
..........................................TGGACTGGGCCAGGCATGCTGCAAC................................................................................................................................................................................................................................................................25170.0610010
.........................................GTGGACTGGGCCAGGCATGCTGCAAC................................................................................................................................................................................................................................................................26170.0611000
.............................................ACTGGGCCAGGCATGCTGCAA.................................................................................................................................................................................................................................................................21180.0611000
droYak3
TGATAGAAAGCTTAGTAGGAAAGATGCTACTTAGCAAACGTATTCAATGGATTGAATATTTATCACAGATACTGTCATAACCCAATTTAGACGACTTCAGCCGTTGGTTAAGTAATATGGCTAGAAGTATA-G--------CAAGGGCCATAGTTACAGATCCAATAAATAATAAAACTTCAACGGGTGAATATAAAGGTCCGC---ACAAGTCTGTGCTTCATTCCACAAAAAGAGAGCAAGGTCAGA-------------------------------------------------ATAA---GGTGAA---A--------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TGATAGAAAGCTTAGTAGGAAAGATGCCACTAAGCAAACGTATTCAATGAATTAAATATTCATCACAGATACTGCCATATCCCAATATTGACGACTTCAGCCGTTGGTTAAGTAATATGGCTAGAAGAATA-A--------CAAGGGCCACAGTTACAGGTCCAATAAAGAATAAAACTCCAAAGGGTGAATATAAAGGTCCAC---AATAGTCTGTGCTTCATTCCACTAGAAGAGAACAAGGTCAGA-------------------------------------------------ATAA---AGTAGA---A--------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................TATTGACGACTTCAGCCGTTGGT.......................................................................................................................................................................................................................23123.002300000023
...............................................................................................TTCAGCCGTTGGTTAAGTAATATGGC..........................................................................................................................................................................................................26102.502500000025
............TAGTAGGAAAGATGCCACTAAGCAAACG...........................................................................................................................................................................................................................................................................................2811.0011000000
.....................................................................................TATTGACGACTTCAGCCGTTGGTT......................................................................................................................................................................................................................2411.0011000000
.............................................................ATCACAGATACTGCCATATCCCAATAT...........................................................................................................................................................................................................................................2711.0011000000
...............TAGGAAAGATGCCACTAAGCAAACGTA.........................................................................................................................................................................................................................................................................................2711.0011000000
.....................................................................................TATTGACGACTTCAGCCGTTGGG.......................................................................................................................................................................................................................2311.0010000001
........................................................................TGCCATATCCCAATATTGACGACT...................................................................................................................................................................................................................................2411.0011000000
.........................................................................................................................................................................................GGTGAATATAAAGGTCCAC---AATAGTC.............................................................................................................2630.6720000002
............................................................................................................................................................................................................................TCATTCCACTAGAAGAGAACAAGG...............................................................................2420.5011000000
.........................................................................................................................................................................................................CAC---AATAGTCTGTGCTTCATTCCACTAGA..........................................................................................2920.5011000000
...............................................................................................................................................................................................................................TTCCACTAGAAGAGAACAAGG...............................................................................2120.5011000000
...............................................................................................................................................................................................TATAAAGGTCCAC---AATAGTCTGTGCTT......................................................................................................2730.3311000000
...............................................................................................................................................................GTCCAATAAAGAATAAAACTCCAA............................................................................................................................................2430.3311000000
.........................................................................................................................TAGAAGAATA-A--------CAAGGGCCACAGT.........................................................................................................................................................................2430.3311000000
...............................................................................................................................................................GTCCAATAAAGAATAAAACTCCAAAG..........................................................................................................................................2630.3311000000
.........................................................ATTCATCACAGATACTGCCATAT...................................................................................................................................................................................................................................................2330.3311000000
...........................................................TCATCACAGATACTGCCATATCCC................................................................................................................................................................................................................................................2430.3311000000
..................................................................................................................................................................CAATAAAGAATAAAACTCCAAAGGG........................................................................................................................................2530.3311000000
.....................................................................................................................................................................TAAAGAATAAAACTCCAAAGGG........................................................................................................................................2230.3311000000
.........................................................................................................GGTTAAGTAATATGGCTAGAAGAAT.................................................................................................................................................................................................2530.3311000000
.......................................................................................................................GCTAGAAGAATA-A--------CAAGGGC...............................................................................................................................................................................2030.3311000000
.....................................................................................................................................................................................................................................TAGAAGAGAACAAGGTCAGA-------------------------------------------------ATAC---T.................2530.3311000000
..................................................................................................................................................................CAATAAAGAATAAAACTCCAAAGG.........................................................................................................................................2430.3311000000
..........................................................................................................................................................TACAGGTCCAATAAAGAATAAAACTCC..............................................................................................................................................2730.3311000000
.........................................................................................................GGTTAAGTAATATGGCTAGAAGA...................................................................................................................................................................................................2330.3311000000
....AGAAAGCTTAGTAGGAAAGATGCC.......................................................................................................................................................................................................................................................................................................2440.2511000000
.........................................................................................GACGACTTCAGCCGTTGGTTAAGTA.................................................................................................................................................................................................................2590.1111000000

Generated: 05/18/2015 at 03:00 AM